RASA3 (RAS p21 protein activator 3) - Rat Genome Database

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Gene: RASA3 (RAS p21 protein activator 3) Sus scrofa
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Symbol: RASA3
Name: RAS p21 protein activator 3
RGD ID: 14078759
Description: ENCODES a protein that exhibits calcium channel regulator activity (inferred); GTPase activator activity (inferred); metal ion binding (inferred); INVOLVED IN cellular response to heat (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); Dwarfism (ortholog); factor X deficiency (ortholog); FOUND IN cytoplasmic side of plasma membrane (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ras GTPase-activating protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1178,951,019 - 79,027,900 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11178,951,017 - 79,027,991 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21186,685,993 - 86,763,496 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RASA3PigDwarfism  ISORASA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Short statureClinVar 
RASA3Pigfactor X deficiency  ISORASA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Factor X deficiencyClinVarPMID:25741868 and PMID:34355501
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RASA3Pigaplastic anemia  ISORasa3 (Mus musculus)9068941OMIM:609135MouseDO 


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RASA3Pigdeoxynivalenol decreases expressionEXP 6480464deoxynivalenol results in decreased expression of RASA3 mRNACTDPMID:35307453


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RASA3Pigcellular response to heat acts_upstream_of_or_withinISORasa3 (Rattus norvegicus)9068941PMID:7500386MGIPMID:7500386 and REF_RGD_ID:10047323
RASA3Pigintracellular signal transduction involved_inIEAInterPro:IPR001562150520179 InterProGO_REF:0000002
RASA3Pignegative regulation of Ras protein signal transduction involved_inIEAInterPro:IPR037774150520179 InterProGO_REF:0000002
RASA3Pigplatelet activation involved_inIEAUniProtKB:Q14644 and ensembl:ENSP00000335029150520179 EnsemblGO_REF:0000107

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RASA3Pigcytoplasmic side of plasma membrane located_inIEAUniProtKB:Q14644 and ensembl:ENSP00000335029150520179 EnsemblGO_REF:0000107

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RASA3Pigcalcium channel regulator activity enablesIEAUniProtKB:Q14644 and ensembl:ENSP00000335029150520179 EnsemblGO_REF:0000107
RASA3PigGTPase activator activity enablesIEAInterPro:IPR037774150520179 InterProGO_REF:0000002
RASA3PigGTPase activator activity enablesIEAUniProtKB-KW:KW-0343150520179 UniProtGO_REF:0000043
RASA3Pigmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
RASA3Pigzinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043

PMID:14681463   PMID:22301074  



RASA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1178,951,019 - 79,027,900 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11178,951,017 - 79,027,991 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21186,685,993 - 86,763,496 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RASA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813113,977,783 - 114,132,623 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13113,977,783 - 114,132,623 (-)EnsemblGRCh38hg38GRCh38
GRCh3713114,747,194 - 114,898,098 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3613113,765,296 - 113,916,197 (-)NCBINCBI36Build 36hg18NCBI36
Build 3413113,765,296 - 113,916,197NCBI
Celera1395,423,074 - 95,573,004 (-)NCBICelera
Cytogenetic Map13q34NCBI
HuRef1395,016,746 - 95,162,033 (-)NCBIHuRef
CHM1_113114,715,940 - 114,865,735 (-)NCBICHM1_1
T2T-CHM13v2.013113,188,423 - 113,340,668 (-)NCBIT2T-CHM13v2.0
Rasa3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39813,617,218 - 13,727,590 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl813,616,948 - 13,727,603 (-)EnsemblGRCm39 Ensembl
GRCm38813,567,218 - 13,677,587 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl813,566,948 - 13,677,603 (-)EnsemblGRCm38mm10GRCm38
MGSCv37813,567,218 - 13,677,587 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36813,567,195 - 13,677,549 (-)NCBIMGSCv36mm8
Celera813,734,036 - 13,844,447 (-)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map86.29NCBI
Rasa3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81682,557,556 - 82,671,527 (+)NCBIGRCr8
mRatBN7.21675,855,360 - 75,969,349 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1675,855,265 - 75,970,804 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1681,135,990 - 81,249,957 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01684,588,959 - 84,702,928 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01679,837,128 - 79,951,690 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01681,320,090 - 81,434,239 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1681,318,633 - 81,434,363 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01680,808,492 - 80,922,641 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41680,710,463 - 80,824,220 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11680,815,596 - 80,825,940 (+)NCBI
Celera1673,663,562 - 73,777,478 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
Rasa3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955404141,060 - 225,572 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955404140,906 - 225,278 (+)NCBIChiLan1.0ChiLan1.0
RASA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v214115,451,429 - 115,622,482 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan113114,144,769 - 114,304,323 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01395,036,382 - 95,195,480 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113114,123,816 - 114,271,066 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13114,123,816 - 114,271,066 (-)Ensemblpanpan1.1panPan2
RASA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12261,093,762 - 61,202,209 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2261,095,044 - 61,202,152 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2260,805,357 - 60,913,843 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02261,780,849 - 61,889,450 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2261,780,855 - 61,889,451 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12261,218,315 - 61,326,769 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02261,225,625 - 61,334,098 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02261,252,037 - 61,360,858 (-)NCBIUU_Cfam_GSD_1.0
Rasa3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945195,992,373 - 196,074,750 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493703040,116 - 122,490 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493703040,123 - 122,478 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1391,848,158 - 91,974,675 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl391,848,160 - 91,974,555 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604649,138,040 - 49,271,270 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rasa3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624793257,661 - 334,981 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624793209,616 - 336,304 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in RASA3
947 total Variants



alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3



Ensembl Acc Id: ENSSSCT00000010488   ⟹   ENSSSCP00000010216
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1178,951,019 - 79,027,921 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000042852   ⟹   ENSSSCP00000044729
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1178,950,878 - 79,027,922 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000051046   ⟹   ENSSSCP00000053985
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1178,950,878 - 79,027,922 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000064392   ⟹   ENSSSCP00000038895
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1178,951,019 - 79,027,900 (-)Ensembl
RefSeq Acc Id: XM_003131110   ⟹   XP_003131158
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11178,951,017 - 79,027,991 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065987   ⟹   XP_020921646
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11178,951,017 - 79,027,947 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065990   ⟹   XP_020921649
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11178,951,017 - 79,005,984 (-)NCBI
Sequence:
RefSeq Acc Id: XP_003131158   ⟸   XM_003131110
- Peptide Label: isoform X2
- UniProtKB: A0A287A546 (UniProtKB/TrEMBL),   A0A8D0J088 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020921646   ⟸   XM_021065987
- Peptide Label: isoform X1
- UniProtKB: A0A480EX62 (UniProtKB/TrEMBL),   A0A4X1TY41 (UniProtKB/TrEMBL),   A0A8D1DRK7 (UniProtKB/TrEMBL),   A0A8D0ISI1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020921649   ⟸   XM_021065990
- Peptide Label: isoform X3
- UniProtKB: A0A8D1K5I2 (UniProtKB/TrEMBL),   A0A8D1ITG7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000038895   ⟸   ENSSSCT00000064392
Ensembl Acc Id: ENSSSCP00000010216   ⟸   ENSSSCT00000010488
C2   PH   Ras-GAP



1 to 40 of 108 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSSCG00000009567 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015079136 UniProtKB/TrEMBL
  ENSSSCG00025029761 UniProtKB/TrEMBL
  ENSSSCG00030008968 UniProtKB/TrEMBL
  ENSSSCG00035036409 UniProtKB/TrEMBL
  ENSSSCG00040018668 UniProtKB/TrEMBL
  ENSSSCG00045033377 UniProtKB/TrEMBL
  ENSSSCG00050034432 UniProtKB/TrEMBL
  ENSSSCG00055028684 UniProtKB/TrEMBL
  ENSSSCG00060037270 UniProtKB/TrEMBL
  ENSSSCG00065078259 UniProtKB/TrEMBL
  ENSSSCG00070013645 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000064392 ENTREZGENE
  ENSSSCT00000064392.3 UniProtKB/TrEMBL
  ENSSSCT00015107316.1 UniProtKB/TrEMBL
  ENSSSCT00015107383.1 UniProtKB/TrEMBL
  ENSSSCT00015107398.1 UniProtKB/TrEMBL
  ENSSSCT00015107419.1 UniProtKB/TrEMBL
  ENSSSCT00025040476.1 UniProtKB/TrEMBL
  ENSSSCT00025040642.1 UniProtKB/TrEMBL
  ENSSSCT00025040827.1 UniProtKB/TrEMBL
  ENSSSCT00025041019.1 UniProtKB/TrEMBL
  ENSSSCT00030012263.1 UniProtKB/TrEMBL
  ENSSSCT00030012273.1 UniProtKB/TrEMBL
  ENSSSCT00030012281.1 UniProtKB/TrEMBL
  ENSSSCT00030012289.1 UniProtKB/TrEMBL
  ENSSSCT00035048250.1 UniProtKB/TrEMBL
  ENSSSCT00035048257.1 UniProtKB/TrEMBL
  ENSSSCT00035048261.1 UniProtKB/TrEMBL
  ENSSSCT00035048265.1 UniProtKB/TrEMBL
  ENSSSCT00040025236.1 UniProtKB/TrEMBL
  ENSSSCT00040025273.1 UniProtKB/TrEMBL
  ENSSSCT00040025287.1 UniProtKB/TrEMBL
  ENSSSCT00040025313.1 UniProtKB/TrEMBL
  ENSSSCT00045057070.1 UniProtKB/TrEMBL
  ENSSSCT00045057242.1 UniProtKB/TrEMBL
  ENSSSCT00045057387.1 UniProtKB/TrEMBL
  ENSSSCT00045057503.1 UniProtKB/TrEMBL
  ENSSSCT00050046227.1 UniProtKB/TrEMBL
  ENSSSCT00050046233.1 UniProtKB/TrEMBL
1 to 40 of 108 rows