CASTOR1 (cytosolic arginine sensor for mTORC1 subunit 1)

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Gene: CASTOR1 (cytosolic arginine sensor for mTORC1 subunit 1) Sus scrofa

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Symbol:

CASTOR1

Name:

cytosolic arginine sensor for mTORC1 subunit 1

RGD ID:

14030335

Description:

ENCODES a protein that exhibits arginine binding (inferred); identical protein binding (inferred); molecular sensor activity (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to L-arginine (inferred); negative regulation of TORC1 signaling (inferred); PARTICIPATES IN mTOR signaling pathway; FOUND IN GATOR2 complex (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

GATS protein like 3; GATS-like protein 3; GATSL3; opposite strand transcription unit to Stag3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	47,261,911 - 47,266,996 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	50,300,851 - 50,305,678 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to amino acid starvation (IEA)

cellular response to L-arginine (IBA,IEA)

negative regulation of TORC1 signaling (IBA,IEA)

positive regulation of TORC1 signaling (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IBA,IEA)

GATOR2 complex (IEA,ISO)

Molecular Function

arginine binding (IBA,IEA)

identical protein binding (IEA)

molecular sensor activity (IEA)

protein binding (ISO)

protein sequestering activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

mTOR signaling pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:30032202

Genomics

Comparative Map Data

CASTOR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	47,261,911 - 47,266,996 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	50,300,851 - 50,305,678 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CASTOR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	30,285,117 - 30,289,505 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	30,285,117 - 30,289,622 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	30,681,106 - 30,685,494 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	29,011,107 - 29,015,502 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	22	14,480,787 - 14,485,320 (-)	NCBI		Celera
Cytogenetic Map	22	q12.2	NCBI
HuRef	22	13,642,884 - 13,647,417 (-)	NCBI		HuRef
CHM1_1	22	30,640,242 - 30,644,751 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	30,748,432 - 30,752,844 (-)	NCBI		T2T-CHM13v2.0

Castor1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	4,167,401 - 4,172,409 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	4,168,225 - 4,172,409 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	4,218,166 - 4,222,409 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	4,218,225 - 4,222,409 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	4,118,254 - 4,122,412 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	4,118,254 - 4,122,412 (+)	NCBI		MGSCv36	mm8
Celera	11	4,715,195 - 4,719,353 (+)	NCBI		Celera
Cytogenetic Map	11	A1	NCBI
cM Map	11	2.94	NCBI

Castor1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	83,309,710 - 83,314,123 (+)	NCBI		GRCr8
mRatBN7.2	14	79,086,136 - 79,090,549 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	79,086,136 - 79,090,548 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	83,526,728 - 83,531,138 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	84,766,807 - 84,771,217 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	81,212,732 - 81,217,144 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	84,447,552 - 84,457,396 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	84,447,885 - 84,452,367 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	85,129,496 - 85,139,061 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	84,840,815 - 84,845,228 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	84,859,946 - 84,863,912 (+)	NCBI
Celera	14	77,997,130 - 78,001,543 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Castor1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	4,531,325 - 4,535,217 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955455	4,530,842 - 4,535,358 (-)	NCBI	ChiLan1.0	ChiLan1.0

CASTOR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	40,252,281 - 40,256,971 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	42,950,890 - 42,955,556 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	11,321,259 - 11,325,787 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	29,123,198 - 29,127,736 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	29,123,198 - 29,127,736 (-)	Ensembl	panpan1.1		panPan2

CASTOR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	23,439,472 - 23,443,950 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	23,439,475 - 23,443,955 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	23,310,655 - 23,315,133 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	23,823,438 - 23,827,916 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	23,823,438 - 23,827,802 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	23,525,122 - 23,529,600 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	23,787,956 - 23,792,434 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	23,848,310 - 23,852,788 (-)	NCBI		UU_Cfam_GSD_1.0

Castor1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	116,357,353 - 116,361,622 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936904	373,198 - 376,370 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936904	372,609 - 376,878 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CASTOR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	13,165,945 - 13,172,734 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	13,165,873 - 13,170,465 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	112,975,807 - 112,980,488 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Castor1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	6,600,335 - 6,604,890 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	6,592,962 - 6,604,811 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CASTOR1
45 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_001929170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005670805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013983042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013983043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013983044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013983045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002338329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK394965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK396049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT827833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01079520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000010955 ⟹ ENSSSCP00000010670

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	47,261,911 - 47,266,996 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000045771 ⟹ ENSSSCP00000038047

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	47,261,911 - 47,264,900 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000054578 ⟹ ENSSSCP00000043838

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	47,261,911 - 47,266,996 (-)	Ensembl

RefSeq Acc Id:

XM_001929170 ⟹ XP_001929205

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGCGGGAGCAGGACCTATCCGTGGTGATCCA
CACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGGAGCCTGTTCCTGTTGCCAGG
GATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAGCCCCACAGTGCATCCCATCC
AGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAGACACTGCCAGCCATCGCCAC
CACCCTCATCGATGTCCTCTTCTACTCGCACAGTGGCCCTAAGGAGGCAGCCTCTGGCAGTCCT
GGATCCAGCTCCATCACCTTCTTTGCTTTCTCCCTCATCGAGGGCTACATCTCCATTGTCATGG
ATGCTGAGACACAGAAAAAGTTCCCCAGTGACCTGCTGCTGACCAGCTCCTCGGGGGAGCTGTG
GAGGATGGTGCGCATCGGCGGACAGCCCCTGGGCTTTGATGAGTGTGGGATCGTGGCCCAGATT
GCAGGTCCCCTGGCTGCGGCTGACATCTCTGCCTACTACATCAGTACCTTCAACTTCGACCATG
CCTTGGTGCCCGAGGACGGCATCAGCAGTGCTATCGAGGTCCTCCAGCGCCGGCAGGAGGGCCT
GGGCTCCTGAGCAGCAGCCTCCGGCCTCTCCCCTTGCCCTCAGGCTTCCAGAGATTTCTCGAAT
ATTTCCTCAAGCTCTGGGACATTCCTGCTGGGGGATCCCTCCTTCTGCTCTGTGTATATAAGCT
GTGGGCAGAGCACCGGCTCTCACGTGGACACACGTGTCTGCCCCCCACAGGGGAATACGGTGCT
CAGGGCTTCCTCCAGGAAGCCCTCAACCCATCACTCCCTGCTGGGCCTCGGCGTTTGCACATTC
CCTGCCTGAGGCCCAAGCCTTCCCCCTTTCGGTAGCCCCGTCTGGCTGGCTGCTCCTGGACAGG
GCCCTGATCTCCGTTCTGCCTCGGGCTGGGGGTTGCCTTCCCTGGCCAGGTGAGTTCTGACAAG
TGCCTCCCCTTCCTGGGACCACCAGAAGTATTTTTACATCTCTCTCTCTCTTCCTTTTTTTATC
AACTTGTTAATAAAGAGCTTGTAGTGAGTGGG

hide sequence

RefSeq Acc Id:

XM_005670805 ⟹ XP_005670862

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGCGGGAGCAGGACCTATCCGTGGTGATCCA
CACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGGAGCCTGTTCCTGTTGCCAGG
GATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAGCCCCACAGTGCATCCCATCC
AGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAGACACTGCCAGCCATCGCCAC
CACCCTCATCGATGTCCTCTTCTACTCGCACAGGTTCCCCAGTGACCTGCTGCTGACCAGCTCC
TCGGGGGAGCTGTGGAGGATGGTGCGCATCGGCGGACAGCCCCTGGGCTTTGATGAGTGTGGGA
TCGTGGCCCAGATTGCAGGTCCCCTGGCTGCGGCTGACATCTCTGCCTACTACATCAGTACCTT
CAACTTCGACCATGCCTTGGTGCCCGAGGACGGCATCAGCAGTGCTATCGAGGTCCTCCAGCGC
CGGCAGGAGGGCCTGGGCTCCTGAGCAGCAGCCTCCGGCCTCTCCCCTTGCCCTCAGGCTTCCA
GAGATTTCTCGAATATTTCCTCAAGCTCTGGGACATTCCTGCTGGGGGATCCCTCCTTCTGCTC
TGTGTATATAAGCTGTGGGCAGAGCACCGGCTCTCACGTGGACACACGTGTCTGCCCCCCACAG
GGGAATACGGTGCTCAGGGCTTCCTCCAGGAAGCCCTCAACCCATCACTCCCTGCTGGGCCTCG
GCGTTTGCACATTCCCTGCCTGAGGCCCAAGCCTTCCCCCTTTCGGTAGCCCCGTCTGGCTGGC
TGCTCCTGGACAGGGCCCTGATCTCCGTTCTGCCTCGGGCTGGGGGTTGCCTTCCCTGGCCAGG
TGAGTTCTGACAAGTGCCTCCCCTTCCTGGGACCACCAGAAGTATTTTTACATCTCTCTCTCTC
TTCCTTTTTTTATCAACTTGTTAATAAAGAGCTTGTAGTGAGTGGG

hide sequence

RefSeq Acc Id:

XM_013983042 ⟹ XP_013838496

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGAGTTTCCTGCAGGTGCTGGGGCAAGGCAG
GGTGGACACGGGTGCCTGGGGACCCGTGTATTGTGTCATCTTTGTGGCCCAGGTGCGGGAGCAG
GACCTATCCGTGGTGATCCACACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGG
AGCCTGTTCCTGTTGCCAGGGATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAG
CCCCACAGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAG
ACACTGCCAGCCATCGCCACCACCCTCATCGATGTCCTCTTCTACTCGCACAGTGGCCCTAAGG
AGGCAGCCTCTGGCAGTCCTGGATCCAGCTCCATCACCTTCTTTGCTTTCTCCCTCATCGAGGG
CTACATCTCCATTGTCATGGATGCTGAGACACAGAAAAAGTTCCCCAGTGACCTGCTGCTGACC
AGCTCCTCGGGGGAGCTGTGGAGGATGGTGCGCATCGGCGGACAGCCCCTGGGCTTTGATGAGT
GTGGGATCGTGGCCCAGATTGCAGGTCCCCTGGCTGCGGCTGACATCTCTGCCTACTACATCAG
TACCTTCAACTTCGACCATGCCTTGGTGCCCGAGGACGGCATCAGCAGTGCTATCGAGGTCCTC
CAGCGCCGGCAGGAGGGCCTGGGCTCCTGAGCAGCAGCCTCCGGCCTCTCCCCTTGCCCTCAGG
CTTCCAGAGATTTCTCGAATATTTCCTCAAGCTCTGGGACATTCCTGCTGGGGGATCCCTCCTT
CTGCTCTGTGTATATAAGCTGTGGGCAGAGCACCGGCTCTCACGTGGACACACGTGTCTGCCCC
CCACAGGGGAATACGGTGCTCAGGGCTTCCTCCAGGAAGCCCTCAACCCATCACTCCCTGCTGG
GCCTCGGCGTTTGCACATTCCCTGCCTGAGGCCCAAGCCTTCCCCCTTTCGGTAGCCCCGTCTG
GCTGGCTGCTCCTGGACAGGGCCCTGATCTCCGTTCTGCCTCGGGCTGGGGGTTGCCTTCCCTG
GCCAGGTGAGTTCTGACAAGTGCCTCCCCTTCCTGGGACCACCAGAAGTATTTTTACATCTCTC
TCTCTCTTCCTTTTTTTATCAACTTGTTAATAAAGAGCTTGTAGTGAGTGGG

hide sequence

RefSeq Acc Id:

XM_013983043 ⟹ XP_013838497

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGAGTTTCCTGCAGGTGCTGGGGCAAGGCAG
GGTGGACACGGGTGCCTGGGGACCCGTGTATTGTGTCATCTTTGTGGCCCAGGTGCGGGAGCAG
GACCTATCCGTGGTGATCCACACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGG
AGCCTGTTCCTGTTGCCAGGGATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAG
CCCCACAGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAG
ACACTGCCAGCCATCGCCACCACCCTCATCGATGTCCTCTTCTACTCGCACAGGTTCCCCAGTG
ACCTGCTGCTGACCAGCTCCTCGGGGGAGCTGTGGAGGATGGTGCGCATCGGCGGACAGCCCCT
GGGCTTTGATGAGTGTGGGATCGTGGCCCAGATTGCAGGTCCCCTGGCTGCGGCTGACATCTCT
GCCTACTACATCAGTACCTTCAACTTCGACCATGCCTTGGTGCCCGAGGACGGCATCAGCAGTG
CTATCGAGGTCCTCCAGCGCCGGCAGGAGGGCCTGGGCTCCTGAGCAGCAGCCTCCGGCCTCTC
CCCTTGCCCTCAGGCTTCCAGAGATTTCTCGAATATTTCCTCAAGCTCTGGGACATTCCTGCTG
GGGGATCCCTCCTTCTGCTCTGTGTATATAAGCTGTGGGCAGAGCACCGGCTCTCACGTGGACA
CACGTGTCTGCCCCCCACAGGGGAATACGGTGCTCAGGGCTTCCTCCAGGAAGCCCTCAACCCA
TCACTCCCTGCTGGGCCTCGGCGTTTGCACATTCCCTGCCTGAGGCCCAAGCCTTCCCCCTTTC
GGTAGCCCCGTCTGGCTGGCTGCTCCTGGACAGGGCCCTGATCTCCGTTCTGCCTCGGGCTGGG
GGTTGCCTTCCCTGGCCAGGTGAGTTCTGACAAGTGCCTCCCCTTCCTGGGACCACCAGAAGTA
TTTTTACATCTCTCTCTCTCTTCCTTTTTTTATCAACTTGTTAATAAAGAGCTTGTAGTGAGTG
GG

hide sequence

RefSeq Acc Id:

XM_013983044 ⟹ XP_013838498

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGAGTTTCCTGCAGGTGCTGGGGCAAGGCAG
GGTGGACACGGGTGCCTGGGGACCCGTGTATTGTGTCATCTTTGTGGCCCAGGTGCGGGAGCAG
GACCTATCCGTGGTGATCCACACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGG
AGCCTGTTCCTGTTGCCAGGGATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAG
CCCCACAGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAG
ACACTGCCAGCCATCGCCACCACCCTCATCGATGTCCTCTTCTACTCGCACAGTGGCCCTAAGG
AGGCAGCCTCTGGCAGTCCTGGATCCAGCTCCATCACCTTCTTTGCTTTCTCCCTCATCGAGGG
CTACATCTCCATTGTCATGGATGCTGAGACACAGAAAAAGTTCCCCAGTGACCTGCTGCTGACC
AGCTCCTCGGGGGAGCTGTGGAGGATGGTGCGCATCGGCGGACAGCCCCTGGGCTTTGATTGCA
GGTCCCCTGGCTGCGGCTGACATCTCTGCCTACTACATCAGTACCTTCAACTTCGACCATGCCT
TGGTGCCCGAGGACGGCATCAGCAGTGCTATCGAGGTCCTCCAGCGCCGGCAGGAGGGCCTGGG
CTCCTGAGCAGCAGCCTCCGGCCTCTCCCCTTGCCCTCAGGCTTCCAGAGATTTCTCGAATATT
TCCTCAAGCTCTGGGACATTCCTGCTGGGGGATCCCTCCTTCTGCTCTGTGTATATAAGCTGTG
GGCAGAGCACCGGCTCTCACGTGGACACACGTGTCTGCCCCCCACAGGGGAATACGGTGCTCAG
GGCTTCCTCCAGGAAGCCCTCAACCCATCACTCCCTGCTGGGCCTCGGCGTTTGCACATTCCCT
GCCTGAGGCCCAAGCCTTCCCCCTTTCGGTAGCCCCGTCTGGCTGGCTGCTCCTGGACAGGGCC
CTGATCTCCGTTCTGCCTCGGGCTGGGGGTTGCCTTCCCTGGCCAGGTGAGTTCTGACAAGTGC
CTCCCCTTCCTGGGACCACCAGAAGTATTTTTACATCTCTCTCTCTCTTCCTTTTTTTATCAAC
TTGTTAATAAAGAGCTTGTAGTGAGTGGG

hide sequence

RefSeq Acc Id:

XM_013983045 ⟹ XP_013838499

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,430 (-)	NCBI

Sequence:

show sequence

CCGGGCACAGAGGGGGGTGGGCTGCACTGTCACTCTGAGATGGGATCGGGAGATTAGGACCTCC
GCGGGGCCAGCGGGAGCAGACAGGGAGAGCGCTCCCCGCCCCCCGCTCCCCACCGCCGCCATCC
GGCCTGGGCCTACCCTCCCTGGGACCGCCGCCTATCCGGCTCGTGAGGCCCCCTCACAGAGCTT
GTTAAGGCGCAGACAGCCTGGGATGGTCAGTGCTTAACTCCTAGTGGTTTCACATGGGGGCATT
TCTTCCTGGCAACTTCGGAGAACTTTTTCCAGCTGCCTCTCATCGGGTCAGAGGGGCTGGTCTA
AGGGGGCTCGGACGCCCGGGACTGCCGCCTTGGGTGCAAATTCTTCAGCCTGACGGAGACCCCT
GAGGATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTAC
AAGTGGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGC
TGCTGGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTG
CTGATGCTGTCCACCTACCAGACAGACTTCATCCTGGTGCGGGAGCAGGACCTATCCGTGGTGA
TCCACACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGGAGCCTGTTCCTGTTGC
CAGGGATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAGCCCCACAGTGCATCCC
ATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAGACACTGCCAGCCATCG
CCACCACCCTCATCGATGTCCTCTTCTACTCGCACAGTGGCCCTAAGGAGGCAGCCTCTGGCAG
TCCTGGATCCAGCTCCATCACCTTCTTTGCTTTCTCCCTCATCGAGGGCTACATCTCCATTGTC
ATGGATGCTGAGACACAGAAAAAGTTCCCCAGTGACCTGCTGCTGACCAGCTCCTCGGGGGAGC
TGTGGAGGATGGTGCGCATCGGCGGACAGCCCCTGGGCTTTGATGAGTGTGGGATCGTGGCCCA
GATTGCAGGTCCCCTGGCTGCGGCTGACATCTCTGCCTACTACATCAGTACCTTCAACTTCGAC
CATGCCTTGGTGCCCGAGGACGGCATCAGCAGTGCTATCGAGGTCCTCCAGCGCCGGCAGGAGG
GCCTGGGCTCCTGAGCAGCAGCCTCCGGCCTCTCCCCTTGCCCTCAGGCTTCCAGAGATTTCTC
GAATATTTCCTCAAGCTCTGGGACATTCCTGCTGGGGGATCCCTCCTTCTGCTCTGTGTATATA
AGCTGTGGGCAGAGCACCGGCTCTCACGTGGACACACGTGTCTGCCCCCCACAGGGGAATACGG
TGCTCAGGGCTTCCTCCAGGAAGCCCTCAACCCATCACTCCCTGCTGGGCCTCGGCGTTTGCAC
ATTCCCTGCCTGAGGCCCAAGCCTTCCCCCTTTCGGTAGCCCCGTCTGGCTGGCTGCTCCTGGA
CAGGGCCCTGATCTCCGTTCTGCCTCGGGCTGGGGGTTGCCTTCCCTGGCCAGGTGAGTTCTGA
CAAGTGCCTCCCCTTCCTGGGACCACCAGAAGTATTTTTACATCTCTCTCTCTCTTCCTTTTTT
TATCAACTTGTTAATAAAGAGCTTGTAGTGAGTGGG

hide sequence

RefSeq Acc Id:

XM_021072301 ⟹ XP_020927960

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGCGGGAGCAGGACCTATCCGTGGTGATCCA
CACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGGAGCCTGTTCCTGTTGCCAGG
GATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAGCCCCACAGTGCATCCCATCC
AGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAGACACTGCCAGCCATCGCCAC
CACCCTCATCGATGTCCTCTTCTACTCGCACAGTGGCCCTAAGGAGGCAGCCTCTGGCAGTCCT
GGATCCAGCTCCATCACCTTCTTTGCTTTCTCCCTCATCGAGGGCTACATCTCCATTGTCATGG
ATGCTGAGACACAGAAAAAGTTCCCCAGTGACCTGCTGCTGACCAGCTCCTCGGGGGAGCTGTG
GAGGATGGTGCGCATCGGCGGACAGCCCCTGGGCTTTGATTGCAGGTCCCCTGGCTGCGGCTGA
CATCTCTGCCTACTACATCAGTACCTTCAACTTCGACCATGCCTTGGTGCCCGAGGACGGCATC
AGCAGTGCTATCGAGGTCCTCCAGCGCCGGCAGGAGGGCCTGGGCTCCTGAGCAGCAGCCTCCG
GCCTCTCCCCTTGCCCTCAGGCTTCCAGAGATTTCTCGAATATTTCCTCAAGCTCTGGGACATT
CCTGCTGGGGGATCCCTCCTTCTGCTCTGTGTATATAAGCTGTGGGCAGAGCACCGGCTCTCAC
GTGGACACACGTGTCTGCCCCCCACAGGGGAATACGGTGCTCAGGGCTTCCTCCAGGAAGCCCT
CAACCCATCACTCCCTGCTGGGCCTCGGCGTTTGCACATTCCCTGCCTGAGGCCCAAGCCTTCC
CCCTTTCGGTAGCCCCGTCTGGCTGGCTGCTCCTGGACAGGGCCCTGATCTCCGTTCTGCCTCG
GGCTGGGGGTTGCCTTCCCTGGCCAGGTGAGTTCTGACAAGTGCCTCCCCTTCCTGGGACCACC
AGAAGTATTTTTACATCTCTCTCTCTCTTCCTTTTTTTATCAACTTGTTAATAAAGAGCTTGTA
GTGAGTGGG

hide sequence

RefSeq Acc Id:

XM_021072302 ⟹ XP_020927961

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,261,905 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGAGTTTCCTGCAGGTGCTGGGGCAAGGCAG
GGTGGACACGGGTGCCTGGGGACCCGTGTATTGTGTCATCTTTGTGGCCCAGGTGCGGGAGCAG
GACCTATCCGTGGTGATCCACACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGG
AGCCTGTTCCTGTTGCCAGGGATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAG
CCCCACAGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAG
ACACTGCCAGCCATCGCCACCACCCTCATCGATGTCCTCTTCTACTCGCACAGGTTCCCCAGTG
ACCTGCTGCTGACCAGCTCCTCGGGGGAGCTGTGGAGGATGGTGCGCATCGGCGGACAGCCCCT
GGGCTTTGATTGCAGGTCCCCTGGCTGCGGCTGACATCTCTGCCTACTACATCAGTACCTTCAA
CTTCGACCATGCCTTGGTGCCCGAGGACGGCATCAGCAGTGCTATCGAGGTCCTCCAGCGCCGG
CAGGAGGGCCTGGGCTCCTGAGCAGCAGCCTCCGGCCTCTCCCCTTGCCCTCAGGCTTCCAGAG
ATTTCTCGAATATTTCCTCAAGCTCTGGGACATTCCTGCTGGGGGATCCCTCCTTCTGCTCTGT
GTATATAAGCTGTGGGCAGAGCACCGGCTCTCACGTGGACACACGTGTCTGCCCCCCACAGGGG
AATACGGTGCTCAGGGCTTCCTCCAGGAAGCCCTCAACCCATCACTCCCTGCTGGGCCTCGGCG
TTTGCACATTCCCTGCCTGAGGCCCAAGCCTTCCCCCTTTCGGTAGCCCCGTCTGGCTGGCTGC
TCCTGGACAGGGCCCTGATCTCCGTTCTGCCTCGGGCTGGGGGTTGCCTTCCCTGGCCAGGTGA
GTTCTGACAAGTGCCTCCCCTTCCTGGGACCACCAGAAGTATTTTTACATCTCTCTCTCTCTTC
CTTTTTTTATCAACTTGTTAATAAAGAGCTTGTAGTGAGTGGG

hide sequence

RefSeq Acc Id:

XR_002338329

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	47,263,011 - 47,266,729 (-)	NCBI

Sequence:

show sequence

GGATTGGCCCCCAGTCCTGCGCGGCGTGGCCGTCAGGGAGCTGGCGTGGCTGGCGGCTAGGACT
CTGCGGCGCAGCGGCTCCTTTAAGCACCTCCCGGCACCGCCCCCGCCGCCCCGCCCCCGGCACG
GCCTGGGTCTGTTTGGCCGTGGGGTCGGGTCCGCGCGGACCGCGATGGAGCTGCACATCCTAGA
GCACCGGGTGCGGGTGCTGAGCCTCGCCCGGCCCGGTCTCTGGCTCTACACTCACCCACTCATC
AAGCTGCTCTTCCTGCCCCGCCGAAGCCGGTGCAAATTCTTCAGCCTGACGGAGACCCCTGAGG
ATTACACGCTCATGGTGGACGAGGAGGGCTTCAAAGAGCTGCCCACGTCTGAGTTCCTACAAGT
GGCCGAGGCCACGTGGCTAGTGCTGAATGTGTCATCCCACAGCGGCACAGCAGTGCAGGCTGCT
GGGGTCACCAAGATTGCCCGCTCAGTAATTGCACCGCTGGCTGAGCACCACGTGTCCGTGCTGA
TGCTGTCCACCTACCAGACAGACTTCATCCTGGTGAGTTTCCTGCAGGTGCTGGGGCAAGGCAG
GGTGGACACGGGTGCCTGGGGACCCGTGTATTGTGTCATCTTTGTGGCCCAGGTGCGGGAGCAG
GACCTATCCGTGGTGATCCACACACTGGCCCAGGAATTTGATATCTACCGAGAGGTGGGCGGGG
AGCCTGTTCCTGTTGCCAGGGATGATTCCAGCAACGGCTTTCCCCGTGCCCAGCATGGGCCCAG
CCCCACAGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACGCTGGACCCTGAG
ACACTGCCAGCCATCGCCACCACCCTCATCGATGTCCTCTTCTACTCGCACAGGTGGGCCTTGT
TTGTCTCTTTGATCTCACAGCTTGTTCCCTACGCTTTGTCCCACCACCTTCCACCAGTCCCTTG
GCTCTGCAGTGCTGTACCCTGTTCCATGTCTGGGGTTCCTGGCAGCCTGCAGTGCCCACAGGCC
CTTCACTGAGGTTCAGGCAAGGTCCTGGTGCTGCAGCTGGAGCCCTTCCCTTTGGGGTGGGCAG
AGCTACTCCTGAAGTGTGCCCTGGTCAGGCCCTGTGGTCCTGGGATCCTGCATCTTTGGCACAA
TGGCCCTAAGGAGGCAGCCTCTGGCAGTCCTGGATCCAGCTCCATCACCTTCTTTGCTTTCTCC
CTCATCGAGGGCTACATCTCCATTGTCATGGATGCTGAGACACAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_001929205	(Get FASTA)	NCBI Sequence Viewer
	XP_005670862	(Get FASTA)	NCBI Sequence Viewer
	XP_013838496	(Get FASTA)	NCBI Sequence Viewer
	XP_013838497	(Get FASTA)	NCBI Sequence Viewer
	XP_013838498	(Get FASTA)	NCBI Sequence Viewer
	XP_013838499	(Get FASTA)	NCBI Sequence Viewer
	XP_020927960	(Get FASTA)	NCBI Sequence Viewer
	XP_020927961	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000010670
	ENSSSCP00000010670.3
	ENSSSCP00000038047
	ENSSSCP00000038047.2
	ENSSSCP00000043838.2
	ENSSSCP00005025171.1
	ENSSSCP00005025184.1
	ENSSSCP00005025204.1
	ENSSSCP00005025234.1
	ENSSSCP00015045139.1
	ENSSSCP00015045143.1
	ENSSSCP00015045185.1
	ENSSSCP00015045200.1
	ENSSSCP00015045265.1
	ENSSSCP00015045280.1
	ENSSSCP00015045314.1
	ENSSSCP00015045345.1
	ENSSSCP00025032454.1
	ENSSSCP00025032544.1
	ENSSSCP00025032607.1
	ENSSSCP00025032677.1
	ENSSSCP00030025692.1
	ENSSSCP00030025702.1
	ENSSSCP00030025715.1
	ENSSSCP00035006730.1
	ENSSSCP00035006736.1
	ENSSSCP00035006740.1
	ENSSSCP00040002404.1
	ENSSSCP00040002407.1
	ENSSSCP00040002410.1
	ENSSSCP00045016864.1
	ENSSSCP00045016882.1
	ENSSSCP00045016904.1
	ENSSSCP00045016940.1
	ENSSSCP00045016956.1
	ENSSSCP00045016974.1
	ENSSSCP00050047994.1
	ENSSSCP00050048009.1
	ENSSSCP00050048021.1
	ENSSSCP00055024705.1
	ENSSSCP00055024773.1
	ENSSSCP00055024820.1
	ENSSSCP00055024883.1
	ENSSSCP00060046152.1
	ENSSSCP00060046187.1
	ENSSSCP00060046240.1
	ENSSSCP00065036389.1
	ENSSSCP00065036390.1
	ENSSSCP00065036394.1
	ENSSSCP00070039030.1
	ENSSSCP00070039034.1

RefSeq Acc Id:	XP_005670862 ⟸ XM_005670805
- Peptide Label:	isoform X5
- UniProtKB:	A0A4X1VCG3 (UniProtKB/TrEMBL), A0A480PVN6 (UniProtKB/TrEMBL), A0A8D0SLA8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELHILEHRVRVLSLARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELP TSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVREQ DLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFPRAQHGPSPTVHPIQSPQNRFCVLTLDPE TLPAIATTLIDVLFYSHRFPSDLLLTSSSGELWRMVRIGGQPLGFDECGIVAQIAGPLAAADIS AYYISTFNFDHALVPEDGISSAIEVLQRRQEGLGS hide sequence

RefSeq Acc Id:	XP_020927960 ⟸ XM_021072301
- Peptide Label:	isoform X6
- UniProtKB:	A0A480PVN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELHILEHRVRVLSLARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELP TSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVREQ DLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFPRAQHGPSPTVHPIQSPQNRFCVLTLDPE TLPAIATTLIDVLFYSHSGPKEAASGSPGSSSITFFAFSLIEGYISIVMDAETQKKFPSDLLLT SSSGELWRMVRIGGQPLGFDCRSPGCG hide sequence

RefSeq Acc Id:	XP_001929205 ⟸ XM_001929170
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1VBI5 (UniProtKB/TrEMBL), A0A480PVN6 (UniProtKB/TrEMBL), A0A8D1P7I0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELHILEHRVRVLSLARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELP TSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVREQ DLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFPRAQHGPSPTVHPIQSPQNRFCVLTLDPE TLPAIATTLIDVLFYSHSGPKEAASGSPGSSSITFFAFSLIEGYISIVMDAETQKKFPSDLLLT SSSGELWRMVRIGGQPLGFDECGIVAQIAGPLAAADISAYYISTFNFDHALVPEDGISSAIEVL QRRQEGLGS hide sequence

RefSeq Acc Id:

XP_020927961 ⟸ XM_021072302

- Peptide Label:

isoform X7

- Sequence:

show sequence

MELHILEHRVRVLSLARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELP
TSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVSFL
QVLGQGRVDTGAWGPVYCVIFVAQVREQDLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFP
RAQHGPSPTVHPIQSPQNRFCVLTLDPETLPAIATTLIDVLFYSHRFPSDLLLTSSSGELWRMV
RIGGQPLGFDCRSPGCG

hide sequence

RefSeq Acc Id:	XP_013838497 ⟸ XM_013983043
- Peptide Label:	isoform X3
- UniProtKB:	A0A480PVN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELHILEHRVRVLSLARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELP TSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVSFL QVLGQGRVDTGAWGPVYCVIFVAQVREQDLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFP RAQHGPSPTVHPIQSPQNRFCVLTLDPETLPAIATTLIDVLFYSHRFPSDLLLTSSSGELWRMV RIGGQPLGFDECGIVAQIAGPLAAADISAYYISTFNFDHALVPEDGISSAIEVLQRRQEGLGS hide sequence

RefSeq Acc Id:	XP_013838498 ⟸ XM_013983044
- Peptide Label:	isoform X4
- UniProtKB:	A0A480PVN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELHILEHRVRVLSLARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELP TSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVSFL QVLGQGRVDTGAWGPVYCVIFVAQVREQDLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFP RAQHGPSPTVHPIQSPQNRFCVLTLDPETLPAIATTLIDVLFYSHSGPKEAASGSPGSSSITFF AFSLIEGYISIVMDAETQKKFPSDLLLTSSSGELWRMVRIGGQPLGFDCRSPGCG hide sequence

RefSeq Acc Id:	XP_013838496 ⟸ XM_013983042
- Peptide Label:	isoform X1
- UniProtKB:	A0A480PVN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELHILEHRVRVLSLARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELP TSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVSFL QVLGQGRVDTGAWGPVYCVIFVAQVREQDLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFP RAQHGPSPTVHPIQSPQNRFCVLTLDPETLPAIATTLIDVLFYSHSGPKEAASGSPGSSSITFF AFSLIEGYISIVMDAETQKKFPSDLLLTSSSGELWRMVRIGGQPLGFDECGIVAQIAGPLAAAD ISAYYISTFNFDHALVPEDGISSAIEVLQRRQEGLGS hide sequence

RefSeq Acc Id:	XP_013838499 ⟸ XM_013983045
- Peptide Label:	isoform X8
- UniProtKB:	A0A287A2R5 (UniProtKB/TrEMBL), A0A8D0J911 (UniProtKB/TrEMBL), A0A8D0SQY8 (UniProtKB/TrEMBL), A0A8D0JCJ7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVDEEGFKELPTSEFLQVAEATWLVLNVSSHSGTAVQAAGVTKIARSVIAPLAEHHVSVLMLST YQTDFILVREQDLSVVIHTLAQEFDIYREVGGEPVPVARDDSSNGFPRAQHGPSPTVHPIQSPQ NRFCVLTLDPETLPAIATTLIDVLFYSHSGPKEAASGSPGSSSITFFAFSLIEGYISIVMDAET QKKFPSDLLLTSSSGELWRMVRIGGQPLGFDECGIVAQIAGPLAAADISAYYISTFNFDHALVP EDGISSAIEVLQRRQEGLGS hide sequence

Ensembl Acc Id:

ENSSSCP00000043838 ⟸ ENSSSCT00000054578

Ensembl Acc Id:

ENSSSCP00000010670 ⟸ ENSSSCT00000010955

Ensembl Acc Id:

ENSSSCP00000038047 ⟸ ENSSSCT00000045771

Protein Domains

CASTOR ACT CASTOR1 N-terminal Cytosolic arginine sensor for mTORC1 subunit 1/2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000009998	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005025679	UniProtKB/TrEMBL
	ENSSSCG00015078974	UniProtKB/TrEMBL
	ENSSSCG00025054662	UniProtKB/TrEMBL
	ENSSSCG00030040664	UniProtKB/TrEMBL
	ENSSSCG00035015003	UniProtKB/TrEMBL
	ENSSSCG00040004581	UniProtKB/TrEMBL
	ENSSSCG00045014310	UniProtKB/TrEMBL
	ENSSSCG00050078547	UniProtKB/TrEMBL
	ENSSSCG00055015705	UniProtKB/TrEMBL
	ENSSSCG00060076535	UniProtKB/TrEMBL
	ENSSSCG00065060923	UniProtKB/TrEMBL
	ENSSSCG00070023211	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000010955	ENTREZGENE
	ENSSSCT00000010955.5	UniProtKB/TrEMBL
	ENSSSCT00000045771	ENTREZGENE
	ENSSSCT00000045771.3	UniProtKB/TrEMBL
	ENSSSCT00000054578.3	UniProtKB/TrEMBL
	ENSSSCT00005041148.1	UniProtKB/TrEMBL
	ENSSSCT00005041175.1	UniProtKB/TrEMBL
	ENSSSCT00005041214.1	UniProtKB/TrEMBL
	ENSSSCT00005041275.1	UniProtKB/TrEMBL
	ENSSSCT00015107030.1	UniProtKB/TrEMBL
	ENSSSCT00015107036.1	UniProtKB/TrEMBL
	ENSSSCT00015107113.1	UniProtKB/TrEMBL
	ENSSSCT00015107135.1	UniProtKB/TrEMBL
	ENSSSCT00015107177.1	UniProtKB/TrEMBL
	ENSSSCT00015107245.1	UniProtKB/TrEMBL
	ENSSSCT00015107288.1	UniProtKB/TrEMBL
	ENSSSCT00015107344.1	UniProtKB/TrEMBL
	ENSSSCT00025074848.1	UniProtKB/TrEMBL
	ENSSSCT00025075071.1	UniProtKB/TrEMBL
	ENSSSCT00025075217.1	UniProtKB/TrEMBL
	ENSSSCT00025075381.1	UniProtKB/TrEMBL
	ENSSSCT00030056556.1	UniProtKB/TrEMBL
	ENSSSCT00030056591.1	UniProtKB/TrEMBL
	ENSSSCT00030056623.1	UniProtKB/TrEMBL
	ENSSSCT00035019072.1	UniProtKB/TrEMBL
	ENSSSCT00035019083.1	UniProtKB/TrEMBL
	ENSSSCT00035019087.1	UniProtKB/TrEMBL
	ENSSSCT00040006105.1	UniProtKB/TrEMBL
	ENSSSCT00040006112.1	UniProtKB/TrEMBL
	ENSSSCT00040006117.1	UniProtKB/TrEMBL
	ENSSSCT00045024409.1	UniProtKB/TrEMBL
	ENSSSCT00045024434.1	UniProtKB/TrEMBL
	ENSSSCT00045024466.1	UniProtKB/TrEMBL
	ENSSSCT00045024518.1	UniProtKB/TrEMBL
	ENSSSCT00045024547.1	UniProtKB/TrEMBL
	ENSSSCT00045024569.1	UniProtKB/TrEMBL
	ENSSSCT00050108273.1	UniProtKB/TrEMBL
	ENSSSCT00050108292.1	UniProtKB/TrEMBL
	ENSSSCT00050108305.1	UniProtKB/TrEMBL
	ENSSSCT00055031033.1	UniProtKB/TrEMBL
	ENSSSCT00055031115.1	UniProtKB/TrEMBL
	ENSSSCT00055031166.1	UniProtKB/TrEMBL
	ENSSSCT00055031248.1	UniProtKB/TrEMBL
	ENSSSCT00060105149.1	UniProtKB/TrEMBL
	ENSSSCT00060105209.1	UniProtKB/TrEMBL
	ENSSSCT00060105285.1	UniProtKB/TrEMBL
	ENSSSCT00065083482.1	UniProtKB/TrEMBL
	ENSSSCT00065083491.1	UniProtKB/TrEMBL
	ENSSSCT00065083496.1	UniProtKB/TrEMBL
	ENSSSCT00070046263.1	UniProtKB/TrEMBL
	ENSSSCT00070046267.1	UniProtKB/TrEMBL
Gene3D-CATH	VC0802-like	UniProtKB/TrEMBL
InterPro	ACT-like_dom_sf	UniProtKB/TrEMBL
	CASTOR1_ACT-like	UniProtKB/TrEMBL
	CASTOR1_N	UniProtKB/TrEMBL
	CASTOR_ACT_dom	UniProtKB/TrEMBL
	CASTOR_fam	UniProtKB/TrEMBL
	CASTOR_mTORC1	UniProtKB/TrEMBL
KEGG Report	ssc:100157272	UniProtKB/TrEMBL
NCBI Gene	CASTOR1	ENTREZGENE
PANTHER	CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE	UniProtKB/TrEMBL
	PTHR31131:SF3	UniProtKB/TrEMBL
Pfam	ACT_7	UniProtKB/TrEMBL
	CASTOR1_ACT-like	UniProtKB/TrEMBL
	Castor1_N	UniProtKB/TrEMBL
PRINTS	GATSLIKEFMLY	UniProtKB/TrEMBL
Superfamily-SCOP	SSF55021	UniProtKB/TrEMBL
UniProt	A0A287A2R5	ENTREZGENE
	A0A287AIJ6_PIG	UniProtKB/TrEMBL
	A0A480PVN6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VBI5	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VCG3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0J911	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0JCJ7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0QD29_PIG	UniProtKB/TrEMBL
	A0A8D0SK20_PIG	UniProtKB/TrEMBL
	A0A8D0SLA8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0SQY8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1HET9_PIG	UniProtKB/TrEMBL
	A0A8D1HLK9_PIG	UniProtKB/TrEMBL
	A0A8D1P7I0	ENTREZGENE, UniProtKB/TrEMBL
	F1RFD7_PIG	UniProtKB/TrEMBL
UniProt Secondary	A0A287A2R5	UniProtKB/TrEMBL
VGNC ID	VGNC:103913	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations