SLC34A2 (solute carrier family 34 member 2) - Rat Genome Database

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Gene: SLC34A2 (solute carrier family 34 member 2) Sus scrofa
Analyze
Symbol: SLC34A2
Name: solute carrier family 34 member 2
RGD ID: 13929825
Description: ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); phosphate ion transport (ortholog); response to estradiol (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); microvillus membrane (ortholog); INTERACTS WITH malathion
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Npt2B; sodium-dependent phosphate cotransporter isoform NaPi-IIb; sodium-dependent phosphate transport protein 2B; solute carrier family 34 (sodium phosphate), member 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl819,481,198 - 19,509,666 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1819,481,127 - 19,507,903 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2819,819,341 - 19,847,993 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
malathion  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:23065201   PMID:30032202  


Genomics

Comparative Map Data
SLC34A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl819,481,198 - 19,509,666 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1819,481,127 - 19,507,903 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2819,819,341 - 19,847,993 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC34A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38425,655,851 - 25,678,748 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl425,648,011 - 25,678,748 (+)EnsemblGRCh38hg38GRCh38
GRCh37425,657,473 - 25,680,370 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36425,266,533 - 25,289,468 (+)NCBINCBI36Build 36hg18NCBI36
Build 34425,333,741 - 25,354,773NCBI
Celera426,105,505 - 26,128,442 (+)NCBICelera
Cytogenetic Map4p15.2NCBI
HuRef424,995,885 - 25,018,820 (+)NCBIHuRef
CHM1_1425,657,246 - 25,680,195 (+)NCBICHM1_1
T2T-CHM13v2.0425,637,821 - 25,660,720 (+)NCBIT2T-CHM13v2.0
Slc34a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39553,206,695 - 53,229,006 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl553,195,423 - 53,229,006 (+)EnsemblGRCm39 Ensembl
GRCm38553,049,353 - 53,071,664 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl553,038,081 - 53,071,664 (+)EnsemblGRCm38mm10GRCm38
MGSCv37553,440,592 - 53,462,903 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36553,337,630 - 53,359,912 (+)NCBIMGSCv36mm8
Celera550,429,966 - 50,452,261 (+)NCBICelera
Cytogenetic Map5C1NCBI
cM Map528.92NCBI
Slc34a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81462,123,313 - 62,153,020 (-)NCBIGRCr8
mRatBN7.21457,910,931 - 57,930,236 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1457,910,480 - 57,930,436 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1462,312,729 - 62,331,995 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01463,631,450 - 63,650,714 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01460,028,211 - 60,047,475 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01460,257,211 - 60,276,516 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1460,256,712 - 60,276,794 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01460,375,980 - 60,395,841 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41462,660,006 - 62,679,311 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11462,661,945 - 62,674,066 (-)NCBI
Celera1457,011,613 - 57,030,915 (-)NCBICelera
Cytogenetic Map14q11NCBI
Slc34a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544319,452,306 - 19,467,129 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544319,452,373 - 19,467,129 (-)NCBIChiLan1.0ChiLan1.0
SLC34A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2325,904,193 - 25,927,027 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1426,099,982 - 26,122,819 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0420,056,254 - 20,079,012 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1425,336,538 - 25,359,381 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl425,336,538 - 25,359,381 (+)Ensemblpanpan1.1panPan2
SLC34A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1384,686,505 - 84,717,579 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl384,686,425 - 84,742,038 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha387,197,404 - 87,228,556 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0385,655,124 - 85,686,281 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl385,655,645 - 85,714,088 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1384,777,180 - 84,808,314 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0384,897,108 - 84,928,226 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0385,280,888 - 85,312,032 (-)NCBIUU_Cfam_GSD_1.0
Slc34a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528550,252,670 - 50,273,639 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364773,956,061 - 3,966,392 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364773,954,377 - 3,975,259 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC34A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12724,674,419 - 24,698,844 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2724,674,584 - 24,690,984 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604771,188,809 - 71,212,116 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc34a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247556,830,056 - 6,842,910 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247556,829,197 - 6,849,898 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SLC34A2
1523 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
1 3 6 1 2 4 5 6 1 3

Sequence


Ensembl Acc Id: ENSSSCT00000009582   ⟹   ENSSSCP00000009335
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl819,481,198 - 19,509,666 (+)Ensembl
RefSeq Acc Id: NM_001256772   ⟹   NP_001243701
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1819,493,579 - 19,507,903 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005666562   ⟹   XP_005666619
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1819,481,127 - 19,507,903 (+)NCBI
Sequence:
RefSeq Acc Id: XP_005666619   ⟸   XM_005666562
- Peptide Label: isoform X1
- UniProtKB: F1S5A6 (UniProtKB/TrEMBL),   A0A8D1U6L7 (UniProtKB/TrEMBL),   A0A8D1W0N8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001243701   ⟸   NM_001256772
- UniProtKB: H2EJJ3 (UniProtKB/TrEMBL),   A0A4X1VAB1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000009335   ⟸   ENSSSCT00000009582


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000008758 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00030050816 UniProtKB/TrEMBL
  ENSSSCG00035010754 UniProtKB/TrEMBL
  ENSSSCG00040020407 UniProtKB/TrEMBL
  ENSSSCG00045023024 UniProtKB/TrEMBL
  ENSSSCG00050033269 UniProtKB/TrEMBL
  ENSSSCG00055019773 UniProtKB/TrEMBL
  ENSSSCG00060054775 UniProtKB/TrEMBL
  ENSSSCG00065031998 UniProtKB/TrEMBL
  ENSSSCG00070022774 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000009582 ENTREZGENE
  ENSSSCT00000009582.5 UniProtKB/TrEMBL
  ENSSSCT00030070895.1 UniProtKB/TrEMBL
  ENSSSCT00035013466.1 UniProtKB/TrEMBL
  ENSSSCT00040027542.1 UniProtKB/TrEMBL
  ENSSSCT00045039434.1 UniProtKB/TrEMBL
  ENSSSCT00050044619.1 UniProtKB/TrEMBL
  ENSSSCT00055038891.1 UniProtKB/TrEMBL
  ENSSSCT00060074589.1 UniProtKB/TrEMBL
  ENSSSCT00065043368.1 UniProtKB/TrEMBL
  ENSSSCT00070045321.1 UniProtKB/TrEMBL
InterPro Na/Pi_transpt UniProtKB/TrEMBL
KEGG Report ssc:641347 UniProtKB/TrEMBL
NCBI Gene SLC34A2 ENTREZGENE
PANTHER PTHR10010 UniProtKB/TrEMBL
  PTHR10010:SF23 UniProtKB/TrEMBL
Pfam Na_Pi_cotrans UniProtKB/TrEMBL
UniProt A0A4X1VAB1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1U6L7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1W0N8 ENTREZGENE, UniProtKB/TrEMBL
  F1S5A6 ENTREZGENE, UniProtKB/TrEMBL
  H2EJJ3 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:93065 ENTREZGENE