Cdca3 (cell division cycle associated 3) - Rat Genome Database

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Gene: Cdca3 (cell division cycle associated 3) Rattus norvegicus
Analyze
Symbol: Cdca3
Name: cell division cycle associated 3
RGD ID: 1359093
Description: Predicted to be involved in cell division and protein ubiquitination. Predicted to be located in adherens junction. Orthologous to human CDCA3 (cell division cycle associated 3); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: cell division cycle-associated protein 3; MGC94266; TOME-1; trigger of mitotic entry protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84159,321,203 - 159,325,072 (+)NCBIGRCr8
mRatBN7.24157,634,775 - 157,638,799 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4157,634,928 - 157,638,799 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4163,863,189 - 163,866,789 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04159,646,099 - 159,649,699 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04158,281,605 - 158,285,192 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04157,347,876 - 157,351,889 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,348,020 - 157,351,604 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04224,365,539 - 224,369,565 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44160,952,986 - 160,956,574 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14161,197,921 - 161,201,509 (+)NCBI
Celera4146,372,845 - 146,376,433 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdca3RatCOVID-19  ISOCDCA3 (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744
1 to 9 of 9 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdca3Ratcongenital stationary night blindness 1H  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Congenital stationary night blindness 1HClinVarPMID:10477144 more ...
Cdca3Ratdevelopmental and epileptic encephalopathy 21  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 21ClinVarPMID:28492532
Cdca3Ratessential hypertension  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Hypertension more ...ClinVarPMID:10477144 more ...
Cdca3Ratgenetic disease  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
Cdca3RatHyperphosphatemic Familial Tumoral Calcinosis 1  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Tumoral calcinosis more ...ClinVarPMID:25378588 and PMID:29389098
Cdca3RatKlippel-Feil syndrome 3  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Klippel-Feil syndrome 3 and autosomal dominantClinVarPMID:28492532
Cdca3Ratlymphoproliferative syndrome 2  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Lymphoproliferative syndrome 2ClinVarPMID:28492532
Cdca3Ratperoxisome biogenesis disorder 2B  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Peroxisome biogenesis disorder 2BClinVarPMID:28492532
Cdca3RatTemtamy syndrome  ISOCDCA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Temtamy syndromeClinVarPMID:28492532
1 to 9 of 9 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdca3Rathepatocellular carcinoma  ISOCDCA3 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:28284560

1 to 20 of 182 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdca3Rat(-)-demecolcine decreases expressionISOCDCA3 (Homo sapiens)6480464Demecolcine results in decreased expression of CDCA3 mRNACTDPMID:23649840
Cdca3Rat(-)-epigallocatechin 3-gallate multiple interactionsISOCDCA3 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of CDCA3 mRNACTDPMID:22079256
Cdca3Rat(1->4)-beta-D-glucan multiple interactionsISOCdca3 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CDCA3 mRNACTDPMID:36331819
Cdca3Rat1,1-dichloroethene increases expressionISOCdca3 (Mus musculus)6480464vinylidene chloride results in increased expression of CDCA3 mRNACTDPMID:26682919
Cdca3Rat1,2-dichloroethane decreases expressionISOCdca3 (Mus musculus)6480464ethylene dichloride results in decreased expression of CDCA3 mRNACTDPMID:28960355
Cdca3Rat1,2-dimethylhydrazine increases expressionISOCdca3 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of CDCA3 mRNACTDPMID:22206623
Cdca3Rat1-naphthyl isothiocyanate increases expressionEXP 64804641-Naphthylisothiocyanate results in increased expression of CDCA3 mRNACTDPMID:30723492
Cdca3Rat17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of CDCA3 mRNACTDPMID:17351261
Cdca3Rat17beta-estradiol increases expressionISOCDCA3 (Homo sapiens)6480464Estradiol results in increased expression of CDCA3 mRNACTDPMID:19167446
Cdca3Rat17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of CDCA3 mRNACTDPMID:32145629
Cdca3Rat17beta-estradiol multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CDCA3 mRNACTDPMID:32741896
Cdca3Rat17beta-estradiol 3-benzoate multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CDCA3 mRNACTDPMID:32741896
Cdca3Rat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOCdca3 (Mus musculus)6480464[2 more ...CTDPMID:25510870
Cdca3Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOCDCA3 (Homo sapiens)64804642 more ...CTDPMID:31173147
Cdca3Rat2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOCdca3 (Mus musculus)6480464[2 more ...CTDPMID:25510870
Cdca3Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOCDCA3 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of CDCA3 mRNACTDPMID:21802500
Cdca3Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of CDCA3 mRNACTDPMID:32109520 more ...
Cdca3Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOCdca3 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of CDCA3 mRNACTDPMID:21570461
Cdca3Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOCdca3 (Mus musculus)64804642 more ...CTDPMID:38648751
Cdca3Rat2-acetamidofluorene increases expressionEXP 64804642-Acetylaminofluorene results in increased expression of CDCA3 mRNACTDPMID:22584684

1 to 20 of 182 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdca3Ratcell division involved_inIEAUniProtKB-KW:KW-01321600115GO_REF:0000043UniProtGO_REF:0000043
Cdca3Ratprotein ubiquitination involved_inIEAUniPathway:UPA001431600115GO_REF:0000041UniProtGO_REF:0000041

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdca3Ratadherens junction located_inISOCDCA3 (Homo sapiens)1624291 PMID:25468996RGDPMID:25468996
Cdca3Ratadherens junction located_inIEAUniProtKB:Q99618 and ensembl:ENSP000004420681600115GO_REF:0000107EnsemblGO_REF:0000107
Cdca3Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Cdca3Ratcytosol located_inIEAUniProtKB-SubCell:SL-00911600115GO_REF:0000044UniProtGO_REF:0000044

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdca3Ratprotein binding enablesISOCDCA3 (Homo sapiens)1624291UniProtKB:O14595 more ...RGDPMID:16189514 more ...


#
Reference Title
Reference Citation
1. Tome-1, a trigger of mitotic entry, is degraded during G1 via the APC. Ayad NG, etal., Cell 2003 Apr 4;113(1):101-13.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:25468996  



Cdca3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84159,321,203 - 159,325,072 (+)NCBIGRCr8
mRatBN7.24157,634,775 - 157,638,799 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4157,634,928 - 157,638,799 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4163,863,189 - 163,866,789 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04159,646,099 - 159,649,699 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04158,281,605 - 158,285,192 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04157,347,876 - 157,351,889 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,348,020 - 157,351,604 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04224,365,539 - 224,369,565 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44160,952,986 - 160,956,574 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14161,197,921 - 161,201,509 (+)NCBI
Celera4146,372,845 - 146,376,433 (+)NCBICelera
Cytogenetic Map4q42NCBI
CDCA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,844,798 - 6,851,286 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl126,844,793 - 6,851,292 (-)EnsemblGRCh38hg38GRCh38
GRCh37126,953,962 - 6,960,450 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,828,253 - 6,830,686 (-)NCBINCBI36Build 36hg18NCBI36
Build 34126,828,253 - 6,830,686NCBI
Celera128,575,256 - 8,577,742 (-)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef126,811,699 - 6,814,184 (-)NCBIHuRef
CHM1_1126,956,970 - 6,959,454 (-)NCBICHM1_1
T2T-CHM13v2.0126,854,092 - 6,860,585 (-)NCBIT2T-CHM13v2.0
Cdca3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396124,806,533 - 124,810,664 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6124,806,510 - 124,810,664 (+)EnsemblGRCm39 Ensembl
GRCm386124,829,530 - 124,833,701 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6124,829,547 - 124,833,701 (+)EnsemblGRCm38mm10GRCm38
MGSCv376124,780,194 - 124,783,719 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366124,795,854 - 124,799,317 (+)NCBIMGSCv36mm8
Celera6126,506,305 - 126,509,830 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.17NCBI
Cdca3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554134,448,917 - 4,450,553 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554134,448,711 - 4,450,917 (-)NCBIChiLan1.0ChiLan1.0
CDCA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21012,411,977 - 12,415,203 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11212,408,735 - 12,411,961 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0126,980,656 - 6,983,796 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1126,892,131 - 6,895,228 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,890,095 - 6,895,364 (-)Ensemblpanpan1.1panPan2
CDCA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,172,717 - 38,174,963 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,172,988 - 38,176,548 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,441,784 - 8,444,823 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02738,524,829 - 38,527,866 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2738,526,093 - 38,529,451 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12738,398,881 - 38,401,918 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02738,439,906 - 38,442,943 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,920,516 - 7,923,555 (-)NCBIUU_Cfam_GSD_1.0
Cdca3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945102,299,369 - 102,301,568 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936709967,294 - 968,896 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936709966,559 - 969,667 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDCA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl563,859,541 - 63,864,269 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1563,858,905 - 63,861,902 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,294,363 - 66,297,412 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CDCA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1116,882,125 - 6,885,311 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl116,881,504 - 6,885,118 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660631,338,332 - 1,341,434 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdca3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248603,515,411 - 3,518,828 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248603,516,244 - 3,519,107 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Cdca3
21 total Variants

Predicted Target Of
Summary Value
Count of predictions:148
Count of miRNA genes:110
Interacting mature miRNAs:119
Transcripts:ENSRNOT00000020803
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat

1 to 10 of 36 rows
RH129139  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24157,638,556 - 157,638,759 (+)MAPPERmRatBN7.2
Rnor_6.04157,351,647 - 157,351,849NCBIRnor6.0
Rnor_5.04224,369,323 - 224,369,525UniSTSRnor5.0
RGSC_v3.44160,956,613 - 160,956,815UniSTSRGSC3.4
Celera4146,376,472 - 146,376,674UniSTS
RH 3.4 Map41005.8UniSTS
Cytogenetic Map4q42UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000020803   ⟹   ENSRNOP00000020803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4157,634,928 - 157,638,514 (+)Ensembl
Rnor_6.0 Ensembl4157,348,020 - 157,351,604 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101621   ⟹   ENSRNOP00000079706
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4157,634,928 - 157,638,368 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000102564   ⟹   ENSRNOP00000091987
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4157,635,453 - 157,638,799 (+)Ensembl
RefSeq Acc Id: NM_001007648   ⟹   NP_001007649
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84159,321,203 - 159,324,791 (+)NCBI
mRatBN7.24157,634,928 - 157,638,518 (+)NCBI
Rnor_6.04157,348,020 - 157,351,608 (+)NCBI
Rnor_5.04224,365,539 - 224,369,565 (+)NCBI
RGSC_v3.44160,952,986 - 160,956,574 (+)RGD
Celera4146,372,845 - 146,376,433 (+)RGD
Sequence:
RefSeq Acc Id: XM_006237341   ⟹   XP_006237403
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84159,321,693 - 159,325,072 (+)NCBI
mRatBN7.24157,635,416 - 157,638,799 (+)NCBI
Rnor_6.04157,348,527 - 157,351,889 (+)NCBI
Rnor_5.04224,365,539 - 224,369,565 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006237342   ⟹   XP_006237404
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84159,321,562 - 159,325,072 (+)NCBI
mRatBN7.24157,634,855 - 157,638,799 (+)NCBI
Rnor_6.04157,347,882 - 157,351,889 (+)NCBI
Rnor_5.04224,365,539 - 224,369,565 (+)NCBI
Sequence:
1 to 9 of 9 rows
Protein RefSeqs NP_001007649 (Get FASTA)   NCBI Sequence Viewer  
  XP_006237403 (Get FASTA)   NCBI Sequence Viewer  
  XP_006237404 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH79204 (Get FASTA)   NCBI Sequence Viewer  
  EDM01920 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000020803
  ENSRNOP00000020803.4
  ENSRNOP00000091987
GenBank Protein Q68FW2 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_001007649   ⟸   NM_001007648
- UniProtKB: Q68FW2 (UniProtKB/Swiss-Prot),   A6ILL8 (UniProtKB/TrEMBL),   A0A8I6AGY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006237404   ⟸   XM_006237342
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AGY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006237403   ⟸   XM_006237341
- Peptide Label: isoform X1
- UniProtKB: Q68FW2 (UniProtKB/Swiss-Prot),   A6ILL8 (UniProtKB/TrEMBL),   A0A8I6AGY5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000020803   ⟸   ENSRNOT00000020803
Ensembl Acc Id: ENSRNOP00000079706   ⟸   ENSRNOT00000101621

Name Modeler Protein Id AA Range Protein Structure
AF-Q68FW2-F1-model_v2 AlphaFold Q68FW2 1-273 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 18 of 18 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-43064 BioCyc
Ensembl Genes ENSRNOG00000015529 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000020803 ENTREZGENE
  ENSRNOT00000020803.5 UniProtKB/Swiss-Prot
  ENSRNOT00000102564 ENTREZGENE
IMAGE_CLONE IMAGE:7131776 IMAGE-MGC_LOAD
InterPro CDCA3 UniProtKB/Swiss-Prot
KEGG Report rno:297594 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94266 IMAGE-MGC_LOAD
NCBI Gene 297594 ENTREZGENE
PANTHER CELL DIVISION CYCLE-ASSOCIATED PROTEIN 3 UniProtKB/Swiss-Prot
  PTHR34756 UniProtKB/Swiss-Prot
PhenoGen Cdca3 PhenoGen
RatGTEx ENSRNOG00000015529 RatGTEx
UniProt A0A8I5ZP48_RAT UniProtKB/TrEMBL
  A0A8I6AGY5 ENTREZGENE, UniProtKB/TrEMBL
  A6ILL8 ENTREZGENE, UniProtKB/TrEMBL
  CDCA3_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 18 of 18 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Cdca3  cell division cycle associated 3      Symbol and Name status set to approved 1299863 APPROVED
2005-07-29 Cdca3  cell division cycle associated 3      Symbol and Name status set to provisional 70820 PROVISIONAL