TRIM38 (tripartite motif containing 38) - Rat Genome Database

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Gene: TRIM38 (tripartite motif containing 38) Homo sapiens
Analyze
Symbol: TRIM38
Name: tripartite motif containing 38
RGD ID: 1349740
HGNC Page HGNC:10059
Description: Enables transcription coactivator activity. Involved in positive regulation of NF-kappaB transcription factor activity; positive regulation of canonical NF-kappaB signal transduction; and positive regulation of viral entry into host cell. Predicted to be active in cytosol and nucleoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: E3 ubiquitin-protein ligase TRIM38; MGC8946; ring finger protein 15; RING-type E3 ubiquitin transferase TRIM38; RNF15; Ro/SSA ribonucleoprotein homolog; RORET; tripartite motif-containing 38; tripartite motif-containing protein 38; zinc finger protein RoRet; zinc-finger protein RoRet
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Related Pseudogenes: LOC646995  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38625,962,802 - 25,991,231 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl625,962,802 - 25,991,231 (+)EnsemblGRCh38hg38GRCh38
GRCh37625,963,030 - 25,991,459 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36626,071,050 - 26,093,337 (+)NCBINCBI36Build 36hg18NCBI36
Build 34626,071,049 - 26,093,329NCBI
Celera627,190,286 - 27,212,582 (+)NCBICelera
Cytogenetic Map6p22.2NCBI
HuRef625,905,972 - 25,930,614 (+)NCBIHuRef
CHM1_1625,965,160 - 25,989,826 (+)NCBICHM1_1
T2T-CHM13v2.0625,828,703 - 25,857,166 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA)
cytosol  (IBA,TAS)
nucleoplasm  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9149941   PMID:11331580   PMID:11854271   PMID:12477932   PMID:12761501   PMID:15489334   PMID:16344560   PMID:18248090   PMID:19084217   PMID:19322201   PMID:19690564   PMID:21143188  
PMID:21306652   PMID:21348951   PMID:21789858   PMID:21873635   PMID:21988832   PMID:22323536   PMID:22539786   PMID:23056470   PMID:23077300   PMID:23275563   PMID:23414517   PMID:24434549  
PMID:25416956   PMID:25910212   PMID:26496610   PMID:27107014   PMID:28295271   PMID:28973437   PMID:29395067   PMID:29892012   PMID:31515488   PMID:32296183   PMID:32393512   PMID:32814053  
PMID:33658012   PMID:33961781   PMID:34906161   PMID:35563538   PMID:35982795   PMID:36042349   PMID:36623352   PMID:37116711   PMID:37566200   PMID:38012139  


Genomics

Comparative Map Data
TRIM38
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38625,962,802 - 25,991,231 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl625,962,802 - 25,991,231 (+)EnsemblGRCh38hg38GRCh38
GRCh37625,963,030 - 25,991,459 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36626,071,050 - 26,093,337 (+)NCBINCBI36Build 36hg18NCBI36
Build 34626,071,049 - 26,093,329NCBI
Celera627,190,286 - 27,212,582 (+)NCBICelera
Cytogenetic Map6p22.2NCBI
HuRef625,905,972 - 25,930,614 (+)NCBIHuRef
CHM1_1625,965,160 - 25,989,826 (+)NCBICHM1_1
T2T-CHM13v2.0625,828,703 - 25,857,166 (+)NCBIT2T-CHM13v2.0
Trim38
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391323,962,483 - 23,975,721 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1323,953,896 - 23,975,511 (+)EnsemblGRCm39 Ensembl
GRCm381323,778,500 - 23,791,731 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1323,769,913 - 23,791,528 (+)EnsemblGRCm38mm10GRCm38
MGSCv371323,874,441 - 23,883,364 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361323,790,037 - 23,798,960 (+)NCBIMGSCv36mm8
Celera1324,014,284 - 24,023,174 (+)NCBICelera
Cytogenetic Map13A3.1NCBI
cM Map139.92NCBI
Trim38
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81741,774,419 - 41,787,709 (-)NCBIGRCr8
mRatBN7.21741,351,857 - 41,365,021 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01743,600,006 - 43,607,879 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01745,454,492 - 45,462,066 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41748,533,590 - 48,541,164 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1740,983,646 - 40,991,519 (-)NCBICelera
Cytogenetic Map17p11NCBI
TRIM38
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2540,608,603 - 40,630,341 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1636,610,178 - 36,647,480 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0625,796,278 - 25,818,610 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1626,454,051 - 26,475,842 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl626,454,051 - 26,475,842 (+)Ensemblpanpan1.1panPan2
TRIM38
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13523,894,521 - 23,939,392 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3523,926,287 - 23,939,466 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3523,805,035 - 23,818,264 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03524,010,055 - 24,054,777 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3524,041,848 - 24,054,577 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13523,826,346 - 23,871,192 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03523,876,839 - 23,913,812 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03525,310,095 - 25,354,827 (+)NCBIUU_Cfam_GSD_1.0
Trim38
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049461,769,006 - 1,779,866 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366711,841,662 - 1,854,306 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366711,841,722 - 1,853,804 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRIM38
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl720,682,652 - 20,704,192 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1720,682,536 - 20,694,340 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TRIM38
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11746,269,498 - 46,292,050 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1746,268,289 - 46,292,092 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604425,899,176 - 25,922,157 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in TRIM38
28 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 6p22.3-21.33(chr6:18120520-30767516)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052180]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052180]|See cases [RCV000052180] Chr6:18120520..30767516 [GRCh38]
Chr6:18120751..30735293 [GRCh37]
Chr6:18228730..30843272 [NCBI36]
Chr6:6p22.3-21.33		 pathogenic
GRCh38/hg38 6p22.3-22.2(chr6:23252522-25967277)x1 copy number loss See cases [RCV000138710] Chr6:23252522..25967277 [GRCh38]
Chr6:23252750..25967505 [GRCh37]
Chr6:23360729..26075484 [NCBI36]
Chr6:6p22.3-22.2		 uncertain significance
GRCh38/hg38 6p25.2-21.33(chr6:3224310-30657190)x3 copy number gain See cases [RCV000138956] Chr6:3224310..30657190 [GRCh38]
Chr6:3224544..30624967 [GRCh37]
Chr6:3169543..30732946 [NCBI36]
Chr6:6p25.2-21.33		 pathogenic
GRCh38/hg38 6p25.3-12.3(chr6:156974-46789291)x3 copy number gain See cases [RCV000143497] Chr6:156974..46789291 [GRCh38]
Chr6:156974..46757028 [GRCh37]
Chr6:101974..46864987 [NCBI36]
Chr6:6p25.3-12.3		 pathogenic
GRCh37/hg19 6p22.2(chr6:25839165-26536884)x4 copy number gain See cases [RCV000447433] Chr6:25839165..26536884 [GRCh37]
Chr6:6p22.2		 uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3 copy number gain See cases [RCV000512067] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482) copy number gain See cases [RCV000510595] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p22.2(chr6:25851789-26319486)x3 copy number gain not provided [RCV000682656] Chr6:25851789..26319486 [GRCh37]
Chr6:6p22.2		 uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3 copy number gain not provided [RCV000745400] Chr6:60107..171054786 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:108666-170980171)x3 copy number gain not provided [RCV000745403] Chr6:108666..170980171 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:165632-170919470)x3 copy number gain not provided [RCV000745404] Chr6:165632..170919470 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p22.2(chr6:25896585-26287389)x4 copy number gain not provided [RCV000845790] Chr6:25896585..26287389 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.111C>G (p.His37Gln) single nucleotide variant not specified [RCV004298884] Chr6:25966633 [GRCh38]
Chr6:25966861 [GRCh37]
Chr6:6p22.2		 uncertain significance
GRCh37/hg19 6p22.2(chr6:25839165-26536884) copy number gain not specified [RCV002053562] Chr6:25839165..26536884 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1340G>A (p.Arg447Gln) single nucleotide variant not specified [RCV004122015] Chr6:25983629 [GRCh38]
Chr6:25983857 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.764G>A (p.Ser255Asn) single nucleotide variant not specified [RCV004086015] Chr6:25973175 [GRCh38]
Chr6:25973403 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.377C>T (p.Thr126Ile) single nucleotide variant not specified [RCV004074672] Chr6:25966899 [GRCh38]
Chr6:25967127 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.202A>G (p.Met68Val) single nucleotide variant not specified [RCV004196774] Chr6:25966724 [GRCh38]
Chr6:25966952 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.461G>T (p.Cys154Phe) single nucleotide variant not specified [RCV004211729] Chr6:25969374 [GRCh38]
Chr6:25969602 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.538C>T (p.Arg180Trp) single nucleotide variant not specified [RCV004170592] Chr6:25971899 [GRCh38]
Chr6:25972127 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.897T>A (p.Asp299Glu) single nucleotide variant not specified [RCV004162854] Chr6:25983186 [GRCh38]
Chr6:25983414 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.910G>A (p.Glu304Lys) single nucleotide variant not specified [RCV004150233] Chr6:25983199 [GRCh38]
Chr6:25983427 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1087G>A (p.Val363Ile) single nucleotide variant not specified [RCV004196341] Chr6:25983376 [GRCh38]
Chr6:25983604 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.707A>G (p.Lys236Arg) single nucleotide variant not specified [RCV004142675] Chr6:25972068 [GRCh38]
Chr6:25972296 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1067G>T (p.Gly356Val) single nucleotide variant not specified [RCV004179461] Chr6:25983356 [GRCh38]
Chr6:25983584 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.316G>A (p.Asp106Asn) single nucleotide variant not specified [RCV004260436] Chr6:25966838 [GRCh38]
Chr6:25967066 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1387C>G (p.Pro463Ala) single nucleotide variant not specified [RCV004283311] Chr6:25983676 [GRCh38]
Chr6:25983904 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.602T>C (p.Leu201Pro) single nucleotide variant not specified [RCV004284967] Chr6:25971963 [GRCh38]
Chr6:25972191 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.672T>A (p.Asn224Lys) single nucleotide variant not specified [RCV004342763] Chr6:25972033 [GRCh38]
Chr6:25972261 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.71C>T (p.Thr24Met) single nucleotide variant not specified [RCV004349367] Chr6:25966593 [GRCh38]
Chr6:25966821 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1055A>G (p.Asp352Gly) single nucleotide variant not specified [RCV004347027] Chr6:25983344 [GRCh38]
Chr6:25983572 [GRCh37]
Chr6:6p22.2		 uncertain significance
GRCh37/hg19 6p22.3-22.2(chr6:21704602-26187420)x1 copy number loss not provided [RCV003485505] Chr6:21704602..26187420 [GRCh37]
Chr6:6p22.3-22.2		 likely pathogenic
GRCh37/hg19 6p22.2(chr6:25560739-26008260)x3 copy number gain not specified [RCV003986669] Chr6:25560739..26008260 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1196C>T (p.Pro399Leu) single nucleotide variant not specified [RCV004473832] Chr6:25983485 [GRCh38]
Chr6:25983713 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1250A>G (p.Asp417Gly) single nucleotide variant not specified [RCV004473833] Chr6:25983539 [GRCh38]
Chr6:25983767 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.1316A>G (p.Lys439Arg) single nucleotide variant not specified [RCV004473834] Chr6:25983605 [GRCh38]
Chr6:25983833 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.461G>C (p.Cys154Ser) single nucleotide variant not specified [RCV004473835] Chr6:25969374 [GRCh38]
Chr6:25969602 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.592C>A (p.Leu198Ile) single nucleotide variant not specified [RCV004473836] Chr6:25971953 [GRCh38]
Chr6:25972181 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.946C>T (p.Arg316Cys) single nucleotide variant not specified [RCV004473837] Chr6:25983235 [GRCh38]
Chr6:25983463 [GRCh37]
Chr6:6p22.2		 uncertain significance
NM_006355.5(TRIM38):c.600G>T (p.Arg200Ser) single nucleotide variant not specified [RCV004684666] Chr6:25971961 [GRCh38]
Chr6:25972189 [GRCh37]
Chr6:6p22.2		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1444
Count of miRNA genes:670
Interacting mature miRNAs:761
Transcripts:ENST00000349458, ENST00000357085
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407292071GWAS941047_Halpha-2-macroglobulin receptor-associated protein measurement QTL GWAS941047 (human)3e-11alpha-2-macroglobulin receptor-associated protein measurement62596503225965033Human
1358839MULTSCL5_HMultiple sclerosis susceptibility QTL 5 (human)Multiple sclerosis susceptibility61958431145584311Human
406996897GWAS645873_Hwellbeing measurement QTL GWAS645873 (human)5e-11wellbeing measurement62598278225982783Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
1298431RA11_HRheumatoid arthritis QTL 11 (human)0.0000024Joint/bone inflammationrheumatoid arthritis61991188340191709Human
406912076GWAS561052_Hbreast cancer, lung cancer QTL GWAS561052 (human)6e-09breast cancer, lung cancer62598278225982783Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
406903186GWAS552162_Hbody height QTL GWAS552162 (human)0.000007body height (VT:0001253)body height (CMO:0000106)62597669825976699Human
407234839GWAS883815_HInguinal hernia QTL GWAS883815 (human)4e-08Inguinal hernia62598354925983550Human
407234838GWAS883814_HInguinal hernia QTL GWAS883814 (human)5e-08Inguinal hernia62597397625973977Human
407352180GWAS1001156_HBMI-adjusted waist circumference QTL GWAS1001156 (human)9e-11BMI-adjusted waist circumference62597889425978895Human
406895380GWAS544356_Hhypotaurine measurement QTL GWAS544356 (human)3e-14hypotaurine measurement62598680925986810Human
407275485GWAS924461_Hbody height QTL GWAS924461 (human)1e-300body height (VT:0001253)body height (CMO:0000106)62599013925990140Human
1358857MULTSCL19_HMultiple sclerosis susceptibility QTL 19 (human)Multiple sclerosis susceptibility61958431145584311Human
1643399BMD5_HBone mineral density QTL 5 (human)2.320.0005Bone mineral density6691196032911960Human
406991132GWAS640108_Htrait in response to triamcinolone acetonide, ocular hypertension QTL GWAS640108 (human)7e-13trait in response to triamcinolone acetonide, ocular hypertension62598317325983174Human

Markers in Region
RH102226  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37625,986,961 - 25,987,145UniSTSGRCh37
Build 36626,094,940 - 26,095,124RGDNCBI36
Celera627,214,185 - 27,214,369RGD
Cytogenetic Map6p21.3UniSTS
HuRef625,930,026 - 25,930,202UniSTS
GeneMap99-GB4 RH Map6106.66UniSTS
SHGC-58405  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37625,983,614 - 25,983,790UniSTSGRCh37
Build 36626,091,593 - 26,091,769RGDNCBI36
Celera627,210,838 - 27,211,014RGD
Cytogenetic Map6p21.3UniSTS
HuRef625,926,679 - 25,926,855UniSTS
SHGC-132992  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37625,983,565 - 25,983,838UniSTSGRCh37
Build 36626,091,544 - 26,091,817RGDNCBI36
Celera627,210,789 - 27,211,062RGD
Cytogenetic Map6p21.3UniSTS
HuRef625,926,630 - 25,926,903UniSTS
TNG Radiation Hybrid Map614132.0UniSTS
RH47677  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37625,985,058 - 25,985,245UniSTSGRCh37
Build 36626,093,037 - 26,093,224RGDNCBI36
Celera627,212,282 - 27,212,469RGD
Cytogenetic Map6p21.3UniSTS
HuRef625,928,123 - 25,928,310UniSTS
GeneMap99-GB4 RH Map6105.5UniSTS
D6S1074  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37625,981,933 - 25,982,036UniSTSGRCh37
Build 36626,089,912 - 26,090,015RGDNCBI36
Celera627,209,157 - 27,209,260RGD
Cytogenetic Map6p21.3UniSTS
HuRef625,924,998 - 25,925,101UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map14q31-q32.1UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map20p11.23-p11.21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map9q21.32UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map10q11.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map7q34-q35UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p25.1-p23UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic MapXp21.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map12p13-p12UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q22UniSTS
Cytogenetic Map4p15.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2p16.3UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map6q24.3UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map6q22.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map15q22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map3p21-p12UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p22-p21.33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map2q31.3UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q32-q33UniSTS
Cytogenetic Map7q21.1UniSTS
Cytogenetic Map14q23-q24.2UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map2p24-p21UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map12p11UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map17q25.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic MapXq25-q26UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map15q25UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map1q25.1-q25.2UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map14q12-q13UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map4q32-q34UniSTS
Cytogenetic MapXq25-q26.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map2p25UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp22.2-p22.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map20q11.22-q12UniSTS
Cytogenetic Map4q34.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map12q13-q14UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map9q31.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map21q21.2UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map8q21.1UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map2q36.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map20p12UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic MapXq26.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map22q13.3UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map11p14UniSTS
Cytogenetic Map1p32.1UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map3p13UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map8q23UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map4q31.3UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic MapXq13UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map16q12-q13UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q13.1UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map22qUniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic MapXp22.12-p22.11UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map8p22-p21.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map7q22-qterUniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map5p15.1-p14.3UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic MapXq22.2UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map14q32.13UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map20q13.2-q13.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2432 2788 2245 4941 1723 2338 4 622 1948 464 2268 7281 6454 51 3705 847 1728 1605 171

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_006355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017010175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047418080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054354032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054354033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054354034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001743104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001743105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB209906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX640949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR936707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA603151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC877159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U90547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U91328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000357085   ⟹   ENSP00000349596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl625,962,802 - 25,991,231 (+)Ensembl
RefSeq Acc Id: NM_006355   ⟹   NP_006346
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38625,962,802 - 25,991,231 (+)NCBI
GRCh37625,962,917 - 25,987,557 (+)NCBI
Build 36626,071,050 - 26,093,337 (+)NCBI Archive
Celera627,190,286 - 27,212,582 (+)RGD
HuRef625,905,972 - 25,930,614 (+)NCBI
CHM1_1625,965,160 - 25,989,826 (+)NCBI
T2T-CHM13v2.0625,828,705 - 25,857,166 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047418080   ⟹   XP_047274036
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38625,962,802 - 25,978,095 (+)NCBI
RefSeq Acc Id: XM_054354032   ⟹   XP_054210007
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0625,828,703 - 25,857,166 (+)NCBI
RefSeq Acc Id: XM_054354033   ⟹   XP_054210008
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0625,828,705 - 25,857,166 (+)NCBI
RefSeq Acc Id: XM_054354034   ⟹   XP_054210009
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0625,828,703 - 25,857,166 (+)NCBI
RefSeq Acc Id: XR_008487235
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0625,828,705 - 25,844,018 (+)NCBI
RefSeq Acc Id: NP_006346   ⟸   NM_006355
- UniProtKB: B2R862 (UniProtKB/Swiss-Prot),   O00635 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000349596   ⟸   ENST00000357085
RefSeq Acc Id: XP_047274036   ⟸   XM_047418080
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054210007   ⟸   XM_054354032
- Peptide Label: isoform X1
- UniProtKB: O00635 (UniProtKB/Swiss-Prot),   B2R862 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054210009   ⟸   XM_054354034
- Peptide Label: isoform X1
- UniProtKB: O00635 (UniProtKB/Swiss-Prot),   B2R862 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054210008   ⟸   XM_054354033
- Peptide Label: isoform X1
- UniProtKB: O00635 (UniProtKB/Swiss-Prot),   B2R862 (UniProtKB/Swiss-Prot)
Protein Domains
B30.2/SPRY

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O00635-F1-model_v2 AlphaFold O00635 1-465 view protein structure

Promoters
RGD ID:6872236
Promoter ID:EPDNEW_H9283
Type:initiation region
Name:TRIM38_1
Description:tripartite motif containing 38
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38625,962,802 - 25,962,862EPDNEW
RGD ID:6804895
Promoter ID:HG_KWN:52572
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000349458,   NM_006355,   UC003NFN.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36626,070,646 - 26,071,146 (+)MPROMDB
RGD ID:6804028
Promoter ID:HG_KWN:52573
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000357085
Position:
Human AssemblyChrPosition (strand)Source
Build 36626,074,381 - 26,074,881 (+)MPROMDB
RGD ID:6804896
Promoter ID:HG_KWN:52574
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:UC010JQD.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36626,080,431 - 26,081,427 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:10059 AgrOrtholog
COSMIC TRIM38 COSMIC
Ensembl Genes ENSG00000112343 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000357085 ENTREZGENE
  ENST00000357085.5 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.120.920 UniProtKB/Swiss-Prot
  3.30.40.10 UniProtKB/Swiss-Prot
  Classic Zinc Finger UniProtKB/Swiss-Prot
GTEx ENSG00000112343 GTEx
HGNC ID HGNC:10059 ENTREZGENE
Human Proteome Map TRIM38 Human Proteome Map
InterPro B30.2/SPRY UniProtKB/Swiss-Prot
  B30.2/SPRY_sf UniProtKB/Swiss-Prot
  Butyrophylin_SPRY UniProtKB/Swiss-Prot
  ConA-like_dom_sf UniProtKB/Swiss-Prot
  PRY UniProtKB/Swiss-Prot
  SPRY/PRY_TRIM38 UniProtKB/Swiss-Prot
  SPRY_dom UniProtKB/Swiss-Prot
  TRIM/RBCC UniProtKB/Swiss-Prot
  Znf_B-box UniProtKB/Swiss-Prot
  Znf_RING UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
  Znf_RING_CS UniProtKB/Swiss-Prot
KEGG Report hsa:10475 UniProtKB/Swiss-Prot
NCBI Gene 10475 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIM UniProtKB/Swiss-Prot
  E3 UBIQUITIN-PROTEIN LIGASE TRIM38 UniProtKB/Swiss-Prot
Pfam PRY UniProtKB/Swiss-Prot
  SPRY UniProtKB/Swiss-Prot
  zf-B_box UniProtKB/Swiss-Prot
  zf-C3HC4_4 UniProtKB/Swiss-Prot
PharmGKB PA35532 PharmGKB
PRINTS BUTYPHLNCDUF UniProtKB/Swiss-Prot
PROSITE B302_SPRY UniProtKB/Swiss-Prot
  ZF_BBOX UniProtKB/Swiss-Prot
  ZF_RING_1 UniProtKB/Swiss-Prot
  ZF_RING_2 UniProtKB/Swiss-Prot
SMART BBOX UniProtKB/Swiss-Prot
  PRY UniProtKB/Swiss-Prot
  RING UniProtKB/Swiss-Prot
  SPRY UniProtKB/Swiss-Prot
Superfamily-SCOP B-box zinc-binding domain UniProtKB/Swiss-Prot
  RING/U-box UniProtKB/Swiss-Prot
  SSF49899 UniProtKB/Swiss-Prot
UniProt B2R862 ENTREZGENE
  O00635 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B2R862 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 TRIM38  tripartite motif containing 38  TRIM38  tripartite motif-containing 38  Symbol and/or name change 5135510 APPROVED