ABLIM1 (actin binding LIM protein 1) - Rat Genome Database

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Gene: ABLIM1 (actin binding LIM protein 1) Homo sapiens
Analyze
Symbol: ABLIM1
Name: actin binding LIM protein 1
RGD ID: 1346152
HGNC Page HGNC:78
Description: Predicted to enable actin filament binding activity. Acts upstream of or within cilium assembly and lamellipodium assembly. Located in lamellipodium and stress fiber.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: ABLIM; abLIM-1; actin-binding double zinc finger protein; actin-binding double-zinc-finger protein; actin-binding LIM protein 1; actin-binding LIM protein family member 1; DKFZp781D0148; FLJ14564; KIAA0059; LIM actin-binding protein 1; LIMAB1; LIMATIN; MGC1224
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810114,431,110 - 114,801,373 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10114,431,110 - 114,768,061 (-)EnsemblGRCh38hg38GRCh38
GRCh3710116,190,869 - 116,528,063 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610116,180,859 - 116,434,404 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410116,180,859 - 116,276,675NCBI
Celera10109,920,119 - 110,173,614 (-)NCBICelera
Cytogenetic Map10q25.3NCBI
HuRef10109,817,609 - 110,070,887 (-)NCBIHuRef
CHM1_110116,474,653 - 116,728,179 (-)NCBICHM1_1
T2T-CHM13v2.010115,325,183 - 115,686,686 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ABLIM1Humansubstance-related disorder  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:20098672

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ABLIM1Human(1->4)-beta-D-glucan multiple interactionsISOAblim1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ABLIM1 mRNACTDPMID:36331819
ABLIM1Human1,2-dichloroethane affects expressionISOAblim1 (Mus musculus)6480464ethylene dichloride affects the expression of ABLIM1 mRNACTDPMID:28960355
ABLIM1Human1,2-dimethylhydrazine increases expressionISOAblim1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of ABLIM1 mRNACTDPMID:22206623
ABLIM1Human17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of ABLIM1 mRNACTDPMID:14699072
ABLIM1Human17beta-estradiol decreases expressionISOAblim1 (Mus musculus)6480464Estradiol results in decreased expression of ABLIM1 mRNACTDPMID:39298647
ABLIM1Human17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with Progesterone] results in decreased expression of ABLIM1 mRNA and [Estradiol co-treated with TGFB1 protein] results in decreased expression of ABLIM1 mRNACTDPMID:20660070 and PMID:30165855
ABLIM1Human2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOAblim1 (Mus musculus)6480464[2 more ...CTDPMID:25510870
ABLIM1Human2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOAblim1 (Mus musculus)6480464[2 more ...CTDPMID:25510870
ABLIM1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOAblim1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of ABLIM1 mRNACTDPMID:21570461
ABLIM1Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOAblim1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of ABLIM1 mRNACTDPMID:19770486 more ...
ABLIM1Human2,6-dimethoxyphenol multiple interactionsEXP 6480464[Sodium Chloride co-treated with pyrogallol 1 and 3-dimethyl ether] results in increased expression of and affects the localization of ABLIM1 proteinCTDPMID:38598786
ABLIM1Human2-methylcholine affects expressionEXP 6480464beta-methylcholine affects the expression of ABLIM1 mRNACTDPMID:21179406
ABLIM1Human3,4-methylenedioxymethamphetamine decreases expressionISOAblim1 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of ABLIM1 mRNACTDPMID:26251327
ABLIM1Human4,4'-diaminodiphenylmethane decreases expressionISOAblim1 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of ABLIM1 mRNACTDPMID:18648102
ABLIM1Human4,4'-diaminodiphenylmethane increases expressionISOAblim1 (Rattus norvegicus)64804644 and 4'-diaminodiphenylmethane results in increased expression of ABLIM1 mRNACTDPMID:30723492
ABLIM1Human4,4'-sulfonyldiphenol increases expressionISOAblim1 (Mus musculus)6480464bisphenol S results in increased expression of ABLIM1 mRNACTDPMID:30951980
ABLIM1Human4,4'-sulfonyldiphenol decreases expressionISOAblim1 (Mus musculus)6480464bisphenol S results in decreased expression of ABLIM1 mRNACTDPMID:39298647
ABLIM1Human8-Br-cAMP decreases expressionEXP 64804648-Bromo Cyclic Adenosine Monophosphate results in decreased expression of ABLIM1 mRNACTDPMID:22079614
ABLIM1Humanacrolein multiple interactionsEXP 6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of and results in increased oxidation of ABLIM1 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of and results in increased oxidation of ABLIM1 mRNACTDPMID:32699268
ABLIM1Humanaflatoxin B1 increases methylationEXP 6480464Aflatoxin B1 results in increased methylation of ABLIM1 geneCTDPMID:27153756

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Biological Process
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Cellular Component
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ABLIM1Humanactin cytoskeleton located_inTAS 150520179 PMID:9245787PINCPMID:9245787
ABLIM1Humanactin cytoskeleton located_inIEAUniProtKB:Q8K4G5 and ensembl:ENSMUSP00000107172150520179 EnsemblGO_REF:0000107
ABLIM1Humanactin cytoskeleton is_active_inIBAMGI:1194500 more ...150520179 GO_CentralGO_REF:0000033
ABLIM1Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
ABLIM1Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
ABLIM1Humancytoskeleton located_inIEAUniProtKB-KW:KW-0206150520179 UniProtGO_REF:0000043
ABLIM1Humancytoskeleton located_inIEAUniProtKB-SubCell:SL-0090150520179 UniProtGO_REF:0000044
ABLIM1Humanlamellipodium located_inIDA 150520179 PMID:22684256MGIPMID:22684256
ABLIM1Humanpostsynaptic density is_active_inISOAblim1 (Mus musculus)9068941 PMID:19455133SynGOPMID:19455133
ABLIM1Humanpostsynaptic density located_inIEAUniProtKB:Q8K4G5 and ensembl:ENSMUSP00000107172150520179 EnsemblGO_REF:0000107
ABLIM1Humanstress fiber located_inIDA 150520179 PMID:22684256MGIPMID:22684256
ABLIM1Humanstress fiber is_active_inIBAPANTHER:PTN002794748 and UniProtKB:O14639150520179 GO_CentralGO_REF:0000033
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Molecular Function
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ABLIM1Humanactin binding enablesIEAUniProtKB:Q8K4G5 and ensembl:ENSMUSP00000107172150520179 EnsemblGO_REF:0000107
ABLIM1Humanactin binding enablesIEAInterPro:IPR003128 and InterPro:IPR036886150520179 InterProGO_REF:0000002
ABLIM1Humanactin binding enablesTAS 150520179 PMID:9245787PINCPMID:9245787
ABLIM1Humanactin binding enablesIEAUniProtKB-KW:KW-0009150520179 UniProtGO_REF:0000043
ABLIM1Humanactin filament binding enablesIBAPANTHER:PTN001198097 and WB:WBGene00006839150520179 GO_CentralGO_REF:0000033
ABLIM1Humanmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
ABLIM1Humanprotein binding enablesIPIUniProtKB:P62258 and UniProtKB:P63104150520179 PMID:35271311IntActPMID:35271311
ABLIM1Humanprotein binding enablesIPIUniProtKB:P31947150520179 PMID:15778465IntActPMID:15778465
ABLIM1Humanprotein binding enablesIPIUniProtKB:Q9H257150520179 PMID:25416956IntActPMID:25416956
ABLIM1Humanprotein binding enablesIPIUniProtKB:O95751150520179 PMID:16189514IntActPMID:16189514
ABLIM1Humanprotein binding  ISOKcnj12 (Rattus norvegicus)9068941 RGDPMID:15024025 and REF_RGD_ID:1581350
ABLIM1Humanprotein binding enablesIPIUniProtKB:O75031 more ...150520179 PMID:32296183IntActPMID:32296183
ABLIM1Humanprotein binding enablesIPIUniProtKB:P63104150520179 PMID:28514442 and PMID:33961781IntActPMID:28514442 and PMID:33961781
ABLIM1Humanprotein binding enablesIPIUniProtKB:P31947 more ...150520179 PMID:36931259IntActPMID:36931259
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#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
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PMID:7566098   PMID:7584044   PMID:8889548   PMID:9245787   PMID:9417918   PMID:12168954   PMID:12477932   PMID:14702039   PMID:15024025   PMID:15144186   PMID:15302935   PMID:15324660  
PMID:15489334   PMID:15570572   PMID:15592455   PMID:15778465   PMID:16094384   PMID:16189514   PMID:16344560   PMID:16385451   PMID:16712791   PMID:17081983   PMID:17194709   PMID:17979178  
PMID:20549515   PMID:20936779   PMID:20970119   PMID:21547531   PMID:21832049   PMID:21873635   PMID:22219177   PMID:22305495   PMID:22684256   PMID:23251661   PMID:23414517   PMID:24255178  
PMID:24337577   PMID:24457600   PMID:24613305   PMID:24711643   PMID:25403273   PMID:25416956   PMID:25468996   PMID:25659154   PMID:25662211   PMID:25852190   PMID:26186194   PMID:26209609  
PMID:26496610   PMID:26638075   PMID:26673895   PMID:26687681   PMID:27173435   PMID:27591049   PMID:27684187   PMID:28514442   PMID:28611215   PMID:28977470   PMID:29117863   PMID:29180619  
PMID:29507755   PMID:29509190   PMID:29513927   PMID:29540532   PMID:29778605   PMID:30196744   PMID:30833792   PMID:30884312   PMID:31527615   PMID:31586073   PMID:31980649   PMID:32203420  
PMID:32296183   PMID:32687490   PMID:32707033   PMID:33060197   PMID:33061800   PMID:33144569   PMID:33644029   PMID:33784440   PMID:33916271   PMID:33961781   PMID:34079125   PMID:34244482  
PMID:34315543   PMID:34597346   PMID:34672954   PMID:34702444   PMID:34709727   PMID:34795231   PMID:35013218   PMID:35013556   PMID:35063084   PMID:35256949   PMID:35271311   PMID:35337019  
PMID:35384245   PMID:35563538   PMID:35914814   PMID:35944360   PMID:36180527   PMID:36526897   PMID:36543142   PMID:36574265   PMID:36583064   PMID:36931259   PMID:36976175   PMID:37071682  
PMID:37167062   PMID:37381005   PMID:37536630   PMID:37616343   PMID:38113892   PMID:38228802   PMID:38280479   PMID:38943005   PMID:39098523   PMID:39231216   PMID:39363234  
1 to 10 of 10 rows



ABLIM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810114,431,110 - 114,801,373 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10114,431,110 - 114,768,061 (-)EnsemblGRCh38hg38GRCh38
GRCh3710116,190,869 - 116,528,063 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610116,180,859 - 116,434,404 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410116,180,859 - 116,276,675NCBI
Celera10109,920,119 - 110,173,614 (-)NCBICelera
Cytogenetic Map10q25.3NCBI
HuRef10109,817,609 - 110,070,887 (-)NCBIHuRef
CHM1_110116,474,653 - 116,728,179 (-)NCBICHM1_1
T2T-CHM13v2.010115,325,183 - 115,686,686 (-)NCBIT2T-CHM13v2.0
Ablim1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391957,021,165 - 57,303,776 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1957,021,165 - 57,303,351 (-)EnsemblGRCm39 Ensembl
GRCm381957,032,733 - 57,315,344 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1957,032,733 - 57,314,919 (-)EnsemblGRCm38mm10GRCm38
MGSCv371957,107,754 - 57,290,522 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361957,090,390 - 57,269,282 (-)NCBIMGSCv36mm8
Celera1959,226,385 - 59,408,337 (-)NCBICelera
Cytogenetic Map19D2NCBI
cM Map1952.09NCBI
Ablim1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81266,088,868 - 266,377,169 (-)NCBIGRCr8
mRatBN7.21256,083,747 - 256,372,075 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1256,084,297 - 256,371,969 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1264,293,977 - 264,485,616 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01271,000,027 - 271,191,663 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01263,645,117 - 263,836,899 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01277,853,877 - 278,043,096 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01285,233,699 - 285,420,807 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41263,380,818 - 263,465,905 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1251,779,866 - 252,069,514 (-)NCBICelera
Cytogenetic Map1q55NCBI
Ablim1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543119,402,023 - 19,683,589 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543119,397,136 - 19,684,574 (-)NCBIChiLan1.0ChiLan1.0
ABLIM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28126,315,945 - 126,645,544 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110126,321,282 - 126,650,889 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010111,030,953 - 111,360,527 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110114,460,703 - 114,712,858 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10114,465,838 - 114,712,561 (-)Ensemblpanpan1.1panPan2
ABLIM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12825,260,323 - 25,543,369 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2825,260,873 - 25,545,304 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2825,412,116 - 25,695,587 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02825,794,442 - 26,078,835 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2825,793,574 - 26,078,829 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12825,349,757 - 25,633,749 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02825,364,845 - 25,649,366 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02825,558,277 - 25,842,977 (-)NCBIUU_Cfam_GSD_1.0
Ablim1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721320,654,882 - 20,840,766 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364864,722,279 - 4,925,551 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364864,720,643 - 4,906,460 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABLIM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14124,760,404 - 125,010,892 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114124,759,811 - 125,108,722 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214135,882,251 - 136,231,438 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABLIM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19107,298,018 - 107,638,915 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9107,302,821 - 107,524,945 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604868,532,262 - 68,873,635 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ablim1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473731,943,110 - 32,164,451 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473731,856,202 - 32,169,116 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in ABLIM1
82 total Variants

1 to 10 of 117 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 10q25.3(chr10:114584882-117015907)x1 copy number loss See cases [RCV000050821] Chr10:114584882..117015907 [GRCh38]
Chr10:116344641..118775418 [GRCh37]
Chr10:116334631..118765408 [NCBI36]
Chr10:10q25.3
pathogenic
GRCh38/hg38 10q23.33-25.3(chr10:95112607-116776637)x3 copy number gain See cases [RCV000050747] Chr10:95112607..116776637 [GRCh38]
Chr10:96872364..118383651 [GRCh37]
Chr10:96862354..118526138 [NCBI36]
Chr10:10q23.33-25.3
pathogenic
GRCh38/hg38 10q25.2-26.3(chr10:111313099-133620674)x3 copy number gain See cases [RCV000051218] Chr10:111313099..133620674 [GRCh38]
Chr10:113072857..135434178 [GRCh37]
Chr10:113062847..135284168 [NCBI36]
Chr10:10q25.2-26.3
pathogenic
GRCh38/hg38 10q25.1-26.11(chr10:107191100-118761489)x1 copy number loss See cases [RCV000052570] Chr10:107191100..118761489 [GRCh38]
Chr10:108950858..120521001 [GRCh37]
Chr10:108940848..120510991 [NCBI36]
Chr10:10q25.1-26.11
pathogenic
GRCh38/hg38 10q23.31-26.3(chr10:91048545-133620674)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]|See cases [RCV000053560] Chr10:91048545..133620674 [GRCh38]
Chr10:92808302..135434178 [GRCh37]
Chr10:92798282..135284168 [NCBI36]
Chr10:10q23.31-26.3
pathogenic
GRCh38/hg38 10q24.31-26.3(chr10:100194215-132432797)x3 copy number gain See cases [RCV000053564] Chr10:100194215..132432797 [GRCh38]
Chr10:101953972..134246301 [GRCh37]
Chr10:101943962..134096291 [NCBI36]
Chr10:10q24.31-26.3
pathogenic
GRCh38/hg38 10q25.1-26.3(chr10:106925303-133620815)x3 copy number gain See cases [RCV000053588] Chr10:106925303..133620815 [GRCh38]
Chr10:108685061..135434319 [GRCh37]
Chr10:108675051..135284309 [NCBI36]
Chr10:10q25.1-26.3
pathogenic
NM_001003407.1(ABLIM1):c.1464C>T (p.Ser488=) single nucleotide variant Malignant melanoma [RCV000068811] Chr10:114447971 [GRCh38]
Chr10:116207730 [GRCh37]
Chr10:116197720 [NCBI36]
Chr10:10q25.3
not provided
NM_001003407.1(ABLIM1):c.973G>A (p.Asp325Asn) single nucleotide variant Malignant melanoma [RCV000068812] Chr10:114473099 [GRCh38]
Chr10:116232858 [GRCh37]
Chr10:116222848 [NCBI36]
Chr10:10q25.3
not provided
NM_001003407.1(ABLIM1):c.659T>G (p.Leu220Arg) single nucleotide variant Malignant melanoma [RCV000068813] Chr10:114545060 [GRCh38]
Chr10:116304819 [GRCh37]
Chr10:116294809 [NCBI36]
Chr10:10q25.3
not provided
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Predicted Target Of
Summary Value
Count of predictions:10656
Count of miRNA genes:1251
Interacting mature miRNAs:1593
Transcripts:ENST00000277895, ENST00000369252, ENST00000369253, ENST00000369256, ENST00000369266, ENST00000392952, ENST00000392955, ENST00000428430, ENST00000440467, ENST00000466400, ENST00000477638, ENST00000481974, ENST00000485570, ENST00000533213
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597617018GWAS1673878_Hgastrointestinal disease, complication QTL GWAS1673878 (human)6e-12gastrointestinal disease, complication10114473199114473200Human
597023121GWAS1119195_Htrait in response to paclitaxel QTL GWAS1119195 (human)0.000002trait in response to paclitaxel10114642349114642350Human
597205055GWAS1301129_Hneuroimaging measurement QTL GWAS1301129 (human)3e-12neuroimaging measurement10114478001114478002Human
597051569GWAS1147643_Hresponse to norepinephrine-dopamine reuptake inhibitor QTL GWAS1147643 (human)0.000006response to norepinephrine-dopamine reuptake inhibitor10114593515114593516Human
597205266GWAS1301340_Hneuroimaging measurement QTL GWAS1301340 (human)5e-16neuroimaging measurement10114478001114478002Human
597335665GWAS1431739_Hsevere acute respiratory syndrome, COVID-19 QTL GWAS1431739 (human)7e-09severe acute respiratory syndrome, COVID-1910114456946114456947Human
407049839GWAS698815_Hsalicylurate measurement QTL GWAS698815 (human)0.000005salicylurate measurement10114557021114557022Human
597145914GWAS1241988_Hsevere acute respiratory syndrome, COVID-19 QTL GWAS1241988 (human)0.0000005severe acute respiratory syndrome, COVID-1910114444215114444216Human
597146937GWAS1243011_Hcoffee consumption measurement QTL GWAS1243011 (human)4e-08coffee consumption measurement10114511206114511207Human
407046316GWAS695292_Hbody mass index QTL GWAS695292 (human)0.000006body mass indexbody mass index (BMI) (CMO:0000105)10114439416114439417Human

1 to 10 of 16 rows
D10S1158  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,272,547 - 116,272,846UniSTSGRCh37
Build 3610116,262,537 - 116,262,836RGDNCBI36
Celera10110,001,780 - 110,002,079RGD
Cytogenetic Map10q25UniSTS
HuRef10109,899,298 - 109,899,597UniSTS
Marshfield Genetic Map10135.24UniSTS
Marshfield Genetic Map10135.24RGD
G15970  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,193,887 - 116,194,117UniSTSGRCh37
Build 3610116,183,877 - 116,184,107RGDNCBI36
Celera10109,923,136 - 109,923,355RGD
Cytogenetic Map10q25UniSTS
HuRef10109,820,626 - 109,820,860UniSTS
RH25292  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,192,389 - 116,192,669UniSTSGRCh37
Build 3610116,182,379 - 116,182,659RGDNCBI36
Celera10109,921,638 - 109,921,918RGD
Cytogenetic Map10q25UniSTS
HuRef10109,819,128 - 109,819,408UniSTS
GeneMap99-GB4 RH Map10521.27UniSTS
D10S1336E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,190,894 - 116,191,045UniSTSGRCh37
Build 3610116,180,884 - 116,181,035RGDNCBI36
Celera10109,920,144 - 109,920,295RGD
Cytogenetic Map10q25UniSTS
HuRef10109,817,634 - 109,817,785UniSTS
GeneMap99-GB4 RH Map10519.15UniSTS
NCBI RH Map101247.5UniSTS
RH66528  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,409,949 - 116,410,143UniSTSGRCh37
Build 3610116,399,939 - 116,400,133RGDNCBI36
Celera10110,139,142 - 110,139,336RGD
Cytogenetic Map10q25UniSTS
HuRef10110,036,413 - 110,036,607UniSTS
GeneMap99-GB4 RH Map10517.81UniSTS
NCBI RH Map101266.9UniSTS
RH91180  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,190,946 - 116,191,078UniSTSGRCh37
Build 3610116,180,936 - 116,181,068RGDNCBI36
Celera10109,920,196 - 109,920,328RGD
Cytogenetic Map10q25UniSTS
HuRef10109,817,686 - 109,817,818UniSTS
GeneMap99-GB4 RH Map10519.86UniSTS
RH119261  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,346,564 - 116,346,883UniSTSGRCh37
Build 3610116,336,554 - 116,336,873RGDNCBI36
Celera10110,075,755 - 110,076,074RGD
Cytogenetic Map10q25UniSTS
HuRef10109,973,033 - 109,973,352UniSTS
TNG Radiation Hybrid Map1056535.0UniSTS
RH122579  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,190,666 - 116,190,953UniSTSGRCh37
Build 3610116,180,656 - 116,180,943RGDNCBI36
Cytogenetic Map10q25UniSTS
D10S1298E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,243,893 - 116,244,018UniSTSGRCh37
Build 3610116,233,883 - 116,234,008RGDNCBI36
Celera10109,973,131 - 109,973,256RGD
Cytogenetic Map10q25UniSTS
HuRef10109,870,631 - 109,870,756UniSTS
SHGC-146082  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,300,321 - 116,300,645UniSTSGRCh37
Build 3610116,290,311 - 116,290,635RGDNCBI36
Celera10110,029,543 - 110,029,867RGD
Cytogenetic Map10q25UniSTS
HuRef10109,926,805 - 109,927,129UniSTS
TNG Radiation Hybrid Map1056519.0UniSTS
SHGC-146643  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,300,596 - 116,300,867UniSTSGRCh37
Build 3610116,290,586 - 116,290,857RGDNCBI36
Celera10110,029,818 - 110,030,089RGD
Cytogenetic Map10q25UniSTS
HuRef10109,927,080 - 109,927,351UniSTS
TNG Radiation Hybrid Map1056523.0UniSTS
SHGC-53066  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,239,766 - 116,239,999UniSTSGRCh37
Build 3610116,229,756 - 116,229,989RGDNCBI36
Celera10109,969,004 - 109,969,237RGD
Cytogenetic Map10q25UniSTS
HuRef10109,866,504 - 109,866,737UniSTS
TNG Radiation Hybrid Map1056512.0UniSTS
D10S2292  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,194,377 - 116,194,711UniSTSGRCh37
Build 3610116,184,367 - 116,184,701RGDNCBI36
Celera10109,923,615 - 109,923,949RGD
Cytogenetic Map10q25UniSTS
HuRef10109,821,120 - 109,821,454UniSTS
Whitehead-YAC Contig Map10 UniSTS
SGC30280  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,190,899 - 116,191,000UniSTSGRCh37
Build 3610116,180,889 - 116,180,990RGDNCBI36
Celera10109,920,149 - 109,920,250RGD
Cytogenetic Map10q25UniSTS
HuRef10109,817,639 - 109,817,740UniSTS
GeneMap99-GB4 RH Map10517.71UniSTS
Whitehead-RH Map10622.9UniSTS
RH44627  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,222,581 - 116,222,749UniSTSGRCh37
Build 3610116,212,571 - 116,212,739RGDNCBI36
Celera10109,951,818 - 109,951,986RGD
Cytogenetic Map10q25UniSTS
HuRef10109,849,318 - 109,849,486UniSTS
GeneMap99-GB4 RH Map10519.86UniSTS
SHGC-35224  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710116,222,581 - 116,222,714UniSTSGRCh37
Build 3610116,212,571 - 116,212,704RGDNCBI36
Celera10109,951,818 - 109,951,951RGD
Cytogenetic Map10q25UniSTS
HuRef10109,849,318 - 109,849,451UniSTS
Stanford-G3 RH Map105333.0UniSTS
GeneMap99-GB4 RH Map10521.27UniSTS
Whitehead-RH Map10622.0UniSTS
GeneMap99-G3 RH Map105569.0UniSTS
D15S1477  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4q32-q35UniSTS
Cytogenetic Map5q11UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map2q31UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q31.3UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map3p25-p24UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map6p21.1-p12.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map14q11.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p22.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map15q21-q23UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map11q12UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map17qUniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p24.2UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2436 2788 2253 4961 1724 2350 6 622 1944 465 2269 7296 6464 52 3722 852 1744 1616 175 1


1 to 30 of 138 rows
RefSeq Transcripts NG_029872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001003407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_002313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005269826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005269827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006717837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 138 rows

Ensembl Acc Id: ENST00000277895   ⟹   ENSP00000277895
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,436,038 - 114,658,298 (-)Ensembl
Ensembl Acc Id: ENST00000369252   ⟹   ENSP00000358256
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,431,113 - 114,684,655 (-)Ensembl
Ensembl Acc Id: ENST00000369253   ⟹   ENSP00000358257
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,435,441 - 114,526,835 (-)Ensembl
Ensembl Acc Id: ENST00000369256   ⟹   ENSP00000358260
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,435,954 - 114,685,003 (-)Ensembl
Ensembl Acc Id: ENST00000369266   ⟹   ENSP00000358270
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,435,461 - 114,526,830 (-)Ensembl
Ensembl Acc Id: ENST00000392952   ⟹   ENSP00000376679
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,431,113 - 114,526,931 (-)Ensembl
Ensembl Acc Id: ENST00000392955   ⟹   ENSP00000376682
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,431,110 - 114,684,457 (-)Ensembl
Ensembl Acc Id: ENST00000428430   ⟹   ENSP00000400934
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,451,645 - 114,526,918 (-)Ensembl
Ensembl Acc Id: ENST00000440467   ⟹   ENSP00000414154
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,450,079 - 114,487,993 (-)Ensembl
Ensembl Acc Id: ENST00000466400
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,465,465 - 114,468,265 (-)Ensembl
Ensembl Acc Id: ENST00000477638
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,595,002 - 114,610,717 (-)Ensembl
Ensembl Acc Id: ENST00000481974
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,547,491 - 114,575,537 (-)Ensembl
Ensembl Acc Id: ENST00000485570
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,439,617 - 114,441,041 (-)Ensembl
Ensembl Acc Id: ENST00000533213   ⟹   ENSP00000433629
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,431,112 - 114,658,275 (-)Ensembl
Ensembl Acc Id: ENST00000649363   ⟹   ENSP00000497150
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,436,178 - 114,658,283 (-)Ensembl
Ensembl Acc Id: ENST00000651023   ⟹   ENSP00000499023
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,435,459 - 114,632,092 (-)Ensembl
Ensembl Acc Id: ENST00000651092   ⟹   ENSP00000499163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,444,086 - 114,768,061 (-)Ensembl
Ensembl Acc Id: ENST00000707119   ⟹   ENSP00000516747
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10114,431,125 - 114,632,044 (-)Ensembl
RefSeq Acc Id: NM_001003407   ⟹   NP_001003407
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,684,443 (-)NCBI
GRCh3710116,190,869 - 116,444,762 (-)NCBI
Build 3610116,180,859 - 116,434,404 (-)NCBI Archive
Celera10109,920,119 - 110,173,614 (-)RGD
HuRef10109,817,609 - 110,070,887 (-)ENTREZGENE
CHM1_110116,474,653 - 116,728,179 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,578,497 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322882   ⟹   NP_001309811
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,685,003 (-)NCBI
CHM1_110116,474,653 - 116,728,179 (-)NCBI
T2T-CHM13v2.010115,325,183 - 115,579,057 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322883   ⟹   NP_001309812
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,684,443 (-)NCBI
CHM1_110116,474,653 - 116,728,179 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,578,497 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322884   ⟹   NP_001309813
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,768,304 (-)NCBI
CHM1_110116,474,653 - 116,811,735 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,662,414 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322885   ⟹   NP_001309814
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,768,304 (-)NCBI
CHM1_110116,474,653 - 116,811,735 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,662,414 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322886   ⟹   NP_001309815
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,768,304 (-)NCBI
CHM1_110116,474,653 - 116,811,735 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,662,414 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322887   ⟹   NP_001309816
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,684,443 (-)NCBI
CHM1_110116,474,653 - 116,728,179 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,578,497 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322888   ⟹   NP_001309817
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322889   ⟹   NP_001309818
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322890   ⟹   NP_001309819
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322891   ⟹   NP_001309820
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322892   ⟹   NP_001309821
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322893   ⟹   NP_001309822
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322894   ⟹   NP_001309823
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322895   ⟹   NP_001309824
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322896   ⟹   NP_001309825
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322897   ⟹   NP_001309826
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322898   ⟹   NP_001309827
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322899   ⟹   NP_001309828
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001322900   ⟹   NP_001309829
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352440   ⟹   NP_001339369
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,632,397 (-)NCBI
T2T-CHM13v2.010115,325,183 - 115,526,451 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352441   ⟹   NP_001339370
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,632,397 (-)NCBI
T2T-CHM13v2.010115,325,183 - 115,526,451 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352442   ⟹   NP_001339371
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,613,736 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,507,789 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352443   ⟹   NP_001339372
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: NM_002313   ⟹   NP_002304
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,658,275 (-)NCBI
GRCh3710116,190,869 - 116,444,762 (-)NCBI
Build 3610116,180,859 - 116,408,048 (-)NCBI Archive
Celera10109,920,119 - 110,173,614 (-)RGD
HuRef10109,817,609 - 110,070,887 (-)ENTREZGENE
CHM1_110116,474,653 - 116,701,823 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,552,322 (-)NCBI
Sequence:
RefSeq Acc Id: NM_006720   ⟹   NP_006711
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,112 - 114,526,913 (-)NCBI
GRCh3710116,190,869 - 116,444,762 (-)NCBI
Build 3610116,180,859 - 116,276,675 (-)NCBI Archive
Celera10109,920,119 - 110,173,614 (-)RGD
HuRef10109,817,609 - 110,070,887 (-)ENTREZGENE
CHM1_110116,474,653 - 116,570,463 (-)NCBI
T2T-CHM13v2.010115,325,185 - 115,420,991 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006717837   ⟹   XP_006717900
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,685,003 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006717846   ⟹   XP_006717909
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,526,913 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011539801   ⟹   XP_011538103
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,613,736 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011539802   ⟹   XP_011538104
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,633,184 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017016245   ⟹   XP_016871734
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,768,304 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017016247   ⟹   XP_016871736
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017016250   ⟹   XP_016871739
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,768,304 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017016255   ⟹   XP_016871744
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,768,304 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017016256   ⟹   XP_016871745
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,632,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024448010   ⟹   XP_024303778
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024448011   ⟹   XP_024303779
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024448013   ⟹   XP_024303781
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,613,736 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024448014   ⟹   XP_024303782
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,632,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024448016   ⟹   XP_024303784
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,632,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024448018   ⟹   XP_024303786
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,632,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047425229   ⟹   XP_047281185
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425231   ⟹   XP_047281187
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425232   ⟹   XP_047281188
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425233   ⟹   XP_047281189
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,685,003 (-)NCBI
RefSeq Acc Id: XM_047425234   ⟹   XP_047281190
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425236   ⟹   XP_047281192
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425237   ⟹   XP_047281193
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425238   ⟹   XP_047281194
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425239   ⟹   XP_047281195
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425240   ⟹   XP_047281196
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425242   ⟹   XP_047281198
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425243   ⟹   XP_047281199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,431,110 - 114,685,003 (-)NCBI
RefSeq Acc Id: XM_047425244   ⟹   XP_047281200
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,449,980 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425245   ⟹   XP_047281201
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,449,980 - 114,801,373 (-)NCBI
RefSeq Acc Id: XM_047425246   ⟹   XP_047281202
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810114,449,980 - 114,632,397 (-)NCBI
RefSeq Acc Id: XM_054365907   ⟹   XP_054221882
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,686 (-)NCBI
RefSeq Acc Id: XM_054365908   ⟹   XP_054221883
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365909   ⟹   XP_054221884
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,507,789 (-)NCBI
RefSeq Acc Id: XM_054365910   ⟹   XP_054221885
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365911   ⟹   XP_054221886
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365912   ⟹   XP_054221887
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,579,057 (-)NCBI
RefSeq Acc Id: XM_054365913   ⟹   XP_054221888
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,686 (-)NCBI
RefSeq Acc Id: XM_054365914   ⟹   XP_054221889
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,527,219 (-)NCBI
RefSeq Acc Id: XM_054365915   ⟹   XP_054221890
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,507,789 (-)NCBI
RefSeq Acc Id: XM_054365916   ⟹   XP_054221891
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,526,451 (-)NCBI
RefSeq Acc Id: XM_054365917   ⟹   XP_054221892
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,662,414 (-)NCBI
RefSeq Acc Id: XM_054365918   ⟹   XP_054221893
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365919   ⟹   XP_054221894
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365920   ⟹   XP_054221895
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,579,057 (-)NCBI
RefSeq Acc Id: XM_054365921   ⟹   XP_054221896
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365922   ⟹   XP_054221897
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365923   ⟹   XP_054221898
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,686 (-)NCBI
RefSeq Acc Id: XM_054365924   ⟹   XP_054221899
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,686 (-)NCBI
RefSeq Acc Id: XM_054365925   ⟹   XP_054221900
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,526,451 (-)NCBI
RefSeq Acc Id: XM_054365926   ⟹   XP_054221901
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,662,414 (-)NCBI
RefSeq Acc Id: XM_054365927   ⟹   XP_054221902
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365928   ⟹   XP_054221903
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365929   ⟹   XP_054221904
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365930   ⟹   XP_054221905
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365931   ⟹   XP_054221906
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,662,414 (-)NCBI
RefSeq Acc Id: XM_054365932   ⟹   XP_054221907
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,526,451 (-)NCBI
RefSeq Acc Id: XM_054365933   ⟹   XP_054221908
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,686,685 (-)NCBI
RefSeq Acc Id: XM_054365934   ⟹   XP_054221909
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,579,057 (-)NCBI
RefSeq Acc Id: XM_054365935   ⟹   XP_054221910
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,526,451 (-)NCBI
RefSeq Acc Id: XM_054365936   ⟹   XP_054221911
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,523,952 (-)NCBI
RefSeq Acc Id: XM_054365937   ⟹   XP_054221912
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,325,183 - 115,420,991 (-)NCBI
RefSeq Acc Id: XM_054365938   ⟹   XP_054221913
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,344,138 - 115,686,686 (-)NCBI
RefSeq Acc Id: XM_054365939   ⟹   XP_054221914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,344,138 - 115,686,686 (-)NCBI
RefSeq Acc Id: XM_054365940   ⟹   XP_054221915
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010115,344,138 - 115,526,451 (-)NCBI
1 to 30 of 116 rows
Protein RefSeqs NP_001003407 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309811 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309812 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309813 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309814 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309815 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309816 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309817 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309818 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309819 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309820 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309821 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309822 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309823 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309824 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309825 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309826 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309827 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309828 (Get FASTA)   NCBI Sequence Viewer  
  NP_001309829 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339369 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339370 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339371 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339372 (Get FASTA)   NCBI Sequence Viewer  
  NP_002304 (Get FASTA)   NCBI Sequence Viewer  
  NP_006711 (Get FASTA)   NCBI Sequence Viewer  
  XP_006717900 (Get FASTA)   NCBI Sequence Viewer  
  XP_006717909 (Get FASTA)   NCBI Sequence Viewer  
  XP_011538103 (Get FASTA)   NCBI Sequence Viewer  
  XP_011538104 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 116 rows
1 to 5 of 104 rows
1 to 5 of 104 rows
RefSeq Acc Id: NP_001003407   ⟸   NM_001003407
- Peptide Label: isoform b
- UniProtKB: F8W8M4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_002304   ⟸   NM_002313
- Peptide Label: isoform a
- UniProtKB: Q68CQ9 (UniProtKB/Swiss-Prot),   Q5T6N5 (UniProtKB/Swiss-Prot),   Q5T6N3 (UniProtKB/Swiss-Prot),   Q5T6N2 (UniProtKB/Swiss-Prot),   Q5JVV2 (UniProtKB/Swiss-Prot),   Q5JVV1 (UniProtKB/Swiss-Prot),   Q15039 (UniProtKB/Swiss-Prot),   B3KVH2 (UniProtKB/Swiss-Prot),   A8MXA9 (UniProtKB/Swiss-Prot),   A6NJ06 (UniProtKB/Swiss-Prot),   A6NI16 (UniProtKB/Swiss-Prot),   Q9BUP1 (UniProtKB/Swiss-Prot),   O14639 (UniProtKB/Swiss-Prot),   A0A2Z4N5U1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_006711   ⟸   NM_006720
- Peptide Label: isoform s
- UniProtKB: B3KSG3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006717900   ⟸   XM_006717837
- Peptide Label: isoform X5
- UniProtKB: F8W8M4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006717909   ⟸   XM_006717846
- Peptide Label: isoform X27
- UniProtKB: B3KSG3 (UniProtKB/TrEMBL)
- Sequence:
Name Modeler Protein Id AA Range Protein Structure
AF-O14639-F1-model_v2 AlphaFold O14639 1-778 view protein structure

RGD ID:6787300
Promoter ID:HG_KWN:11256
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell
Transcripts:OTTHUMT00000050480
Position:
Human AssemblyChrPosition (strand)Source
Build 3610116,237,066 - 116,237,566 (-)MPROMDB
RGD ID:6787303
Promoter ID:HG_KWN:11257
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell
Transcripts:UC009XYG.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3610116,242,266 - 116,242,766 (-)MPROMDB
RGD ID:6787549
Promoter ID:HG_KWN:11259
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000369257,   ENST00000369260,   ENST00000392952,   NM_006720,   OTTHUMT00000050479,   UC009XYH.1,   UC009XYN.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3610116,276,294 - 116,276,794 (-)MPROMDB


1 to 40 of 77 rows
Database
Acc Id
Source(s)
COSMIC ABLIM1 COSMIC
Ensembl Genes ENSG00000099204 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000369253 ENTREZGENE
  ENST00000369253.6 UniProtKB/Swiss-Prot
  ENST00000369256 ENTREZGENE
  ENST00000369256.6 UniProtKB/Swiss-Prot
  ENST00000392952 ENTREZGENE
  ENST00000392952.7 UniProtKB/Swiss-Prot
  ENST00000392955 ENTREZGENE
  ENST00000392955.8 UniProtKB/Swiss-Prot
  ENST00000533213 ENTREZGENE
  ENST00000533213.7 UniProtKB/Swiss-Prot
  ENST00000651023 ENTREZGENE
  ENST00000707119 ENTREZGENE
Gene3D-CATH 1.10.950.10 UniProtKB/Swiss-Prot
  Cysteine Rich Protein UniProtKB/Swiss-Prot
GTEx ENSG00000099204 GTEx
HGNC ID HGNC:78 ENTREZGENE
Human Proteome Map ABLIM1 Human Proteome Map
InterPro AbLIM_anchor UniProtKB/Swiss-Prot
  Actin-binding_LIM UniProtKB/Swiss-Prot
  Villin_headpiece UniProtKB/Swiss-Prot
  Villin_headpiece_dom_sf UniProtKB/Swiss-Prot
  Znf_LIM UniProtKB/Swiss-Prot
KEGG Report hsa:3983 UniProtKB/Swiss-Prot
NCBI Gene 3983 ENTREZGENE
OMIM 602330 OMIM
PANTHER ACTIN-BINDING LIM PROTEIN UniProtKB/Swiss-Prot
  PTHR24213:SF18 UniProtKB/Swiss-Prot
Pfam AbLIM_anchor UniProtKB/Swiss-Prot
  LIM UniProtKB/Swiss-Prot
  VHP UniProtKB/Swiss-Prot
PharmGKB ABLIM1 RGD, PharmGKB
PROSITE LIM_DOMAIN_1 UniProtKB/Swiss-Prot
  LIM_DOMAIN_2 UniProtKB/Swiss-Prot
  PS51089 UniProtKB/Swiss-Prot
SMART LIM UniProtKB/Swiss-Prot
  VHP UniProtKB/Swiss-Prot
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot
  SSF47050 UniProtKB/Swiss-Prot
1 to 40 of 77 rows