RCC1 (regulator of chromosome condensation 1)

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Gene: RCC1 (regulator of chromosome condensation 1) Homo sapiens

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Symbol:

RCC1

Name:

regulator of chromosome condensation 1

RGD ID:

1343250

HGNC Page

HGNC:1913

Description:

Enables several functions, including guanyl-nucleotide exchange factor activity; nucleosomal DNA binding activity; and protein heterodimerization activity. Involved in G1/S transition of mitotic cell cycle; regulation of mitotic nuclear division; and spindle organization. Located in chromatin; cytoplasm; and nuclear lumen. Part of protein-containing complex.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cell cycle regulatory protein; CHC1; chromosome condensation 1; chromosome condensation protein 1; guanine nucleotide-releasing protein; RCC1-I; regulator of chromosome condensation; SNHG3-RCC1; SNHG3-RCC1 readthrough; SNHG3-RCC1 readthrough transcript

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Rcc1 (regulator of chromosome condensation 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Rcc1 (regulator of chromosome condensation 1)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Rcc1 (regulator of chromosome condensation 1)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	RCC1 (regulator of chromosome condensation 1)	NCBI	Ortholog
Canis lupus familiaris (dog):	RCC1 (regulator of chromosome condensation 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rcc1 (regulator of chromosome condensation 1)	NCBI	Ortholog
Sus scrofa (pig):	RCC1 (regulator of chromosome condensation 1)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):	RCC1 (regulator of chromosome condensation 1)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Rcc1 (regulator of chromosome condensation 1)	NCBI	Ortholog
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Rcc1 (regulator of chromosome condensation 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rcc1 (regulator of chromosome condensation 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rcc1 (regulator of chromosome condensation 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Caenorhabditis elegans (roundworm):	ran-3	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rcc1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SRM1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	rcc1.S	Alliance	DIOPT (Xenbase)
Xenopus tropicalis (tropical clawed frog):	rcc1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	rcc1.L	Alliance	DIOPT (Xenbase)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	28,506,043 - 28,538,989 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	28,505,943 - 28,539,300 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	28,832,555 - 28,865,501 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	28,717,332 - 28,738,194 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	28,653,183 - 28,686,118	NCBI
Celera	1	27,228,232 - 27,261,474 (+)	NCBI		Celera
Cytogenetic Map	1	p35.3	NCBI
HuRef	1	27,086,264 - 27,119,463 (+)	NCBI		HuRef
CHM1_1	1	28,947,946 - 28,981,201 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	28,347,999 - 28,380,949 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-amino-14,16-dimethyloctadecan-3-ol (EXP)

2-methylcholine (EXP)

4-(ethoxymethylene)-2-phenyloxazol-5-one (ISO)

5-fluorouracil (EXP)

acrolein (EXP)

actinomycin D (EXP)

all-trans-retinoic acid (EXP)

alpha-pinene (EXP)

AM-251 (EXP)

amphetamine (ISO)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene diol epoxide I (EXP)

benzo[e]pyrene (EXP)

bisphenol A (EXP)

Brodifacoum (ISO)

carbon nanotube (ISO)

CGP 52608 (EXP)

choline (ISO)

clofibrate (ISO)

cobalt dichloride (EXP)

copper(II) sulfate (EXP)

deoxynivalenol (ISO)

doxorubicin (EXP)

enzyme inhibitor (EXP)

folic acid (ISO)

formaldehyde (EXP)

FR900359 (EXP)

hexadecanoic acid (EXP)

hydrogen peroxide (EXP)

ivermectin (EXP)

L-methionine (ISO)

lead(0) (EXP)

methapyrilene (EXP)

methyl methanesulfonate (EXP)

N-methyl-4-phenylpyridinium (ISO)

nickel atom (EXP)

Nutlin-3 (EXP)

ozone (EXP,ISO)

paracetamol (EXP)

perfluorooctanoic acid (EXP)

pirinixic acid (ISO)

potassium chromate (EXP)

progesterone (EXP)

rotenone (ISO)

sodium arsenite (EXP,ISO)

sodium fluoride (ISO)

tacrolimus hydrate (ISO)

tamibarotene (EXP)

thioacetamide (ISO)

titanium dioxide (ISO)

toluene 2,4-diisocyanate (ISO)

trichostatin A (EXP)

trimellitic anhydride (ISO)

triptonide (ISO)

tunicamycin (EXP)

valproic acid (EXP,ISO)

venlafaxine hydrochloride (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell division (IEA)

chromosome segregation (IMP)

G1/S transition of mitotic cell cycle (IMP)

mitotic nuclear membrane reassembly (TAS)

mitotic spindle organization (IDA)

regulation of mitotic cell cycle (IBA)

regulation of mitotic nuclear division (IDA)

regulation of mitotic spindle assembly (IBA)

spindle assembly (IMP)

viral process (TAS)

Cellular Component

chromatin (IDA)

chromosome (IEA,TAS)

condensed nuclear chromosome (IDA)

cytoplasm (IBA,IDA,IEA)

nucleoplasm (IDA,TAS)

nucleus (HDA,IDA,IEA)

protein-containing complex (IDA)

Molecular Function

chromatin binding (IDA)

DNA binding (IEA)

guanyl-nucleotide exchange factor activity (IBA,IDA,IEA,IMP,TAS)

histone binding (IDA)

nucleosomal DNA binding (IDA)

nucleosome binding (IMP)

protein binding (IPI)

protein heterodimerization activity (IPI)

small GTPase binding (IDA)

sulfate binding (IDA)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:1769659	PMID:1944575	PMID:1961752	PMID:2236072	PMID:2677018	PMID:3678831	PMID:7616957	PMID:7851910	PMID:7882974	PMID:7891706	PMID:7983178	PMID:7988569
PMID:8896453	PMID:9510255	PMID:9637251	PMID:10089422	PMID:10369786	PMID:10744690	PMID:10811801	PMID:10811825	PMID:10827954	PMID:10875935	PMID:11310559	PMID:11336674
PMID:11375490	PMID:11932251	PMID:12062430	PMID:12121620	PMID:12194828	PMID:12477932	PMID:14565978	PMID:15014043	PMID:15302935	PMID:15489334	PMID:15635413	PMID:16052169
PMID:16407974	PMID:16820410	PMID:16964243	PMID:17081983	PMID:17158748	PMID:17251553	PMID:17435751	PMID:17855385	PMID:18029348	PMID:18439570	PMID:18442486	PMID:18568422
PMID:18617507	PMID:18712773	PMID:18762580	PMID:18850631	PMID:19060893	PMID:19738201	PMID:20347844	PMID:20565941	PMID:20668449	PMID:20739938	PMID:21630459	PMID:21873635
PMID:21900206	PMID:21907836	PMID:22199357	PMID:22215983	PMID:22623428	PMID:22658674	PMID:22939629	PMID:22944692	PMID:23536659	PMID:23752268	PMID:24457600	PMID:24711643
PMID:24981860	PMID:25348717	PMID:25452301	PMID:25609649	PMID:26186194	PMID:26344197	PMID:26496610	PMID:26752685	PMID:26760575	PMID:26777405	PMID:26823742	PMID:26864624
PMID:26871637	PMID:26972000	PMID:27182664	PMID:27248496	PMID:27503909	PMID:27609421	PMID:27634302	PMID:27880917	PMID:27926873	PMID:28192407	PMID:28242625	PMID:28284242
PMID:28302793	PMID:28514442	PMID:29040603	PMID:29042532	PMID:29117863	PMID:29128334	PMID:29229926	PMID:29363114	PMID:29459360	PMID:29464982	PMID:29467282	PMID:29509190
PMID:29789527	PMID:29955894	PMID:29997244	PMID:30021884	PMID:30110629	PMID:30196744	PMID:30554943	PMID:30575818	PMID:30804502	PMID:30833792	PMID:30862715	PMID:30884312
PMID:30948266	PMID:31091453	PMID:31180492	PMID:31239290	PMID:31467278	PMID:31586073	PMID:31722399	PMID:31980649	PMID:31995728	PMID:32416067	PMID:32594833	PMID:32780723
PMID:32786267	PMID:32941674	PMID:32994395	PMID:33022573	PMID:33539787	PMID:33630417	PMID:33660365	PMID:33742100	PMID:33957083	PMID:33961781	PMID:34189442	PMID:34356619
PMID:34373451	PMID:34564892	PMID:34709727	PMID:34924821	PMID:35256949	PMID:35271311	PMID:35384245	PMID:35446349	PMID:35546148	PMID:35563538	PMID:35575683	PMID:35831314
PMID:35906200	PMID:35944360	PMID:35987950	PMID:36057605	PMID:36114006	PMID:36180891	PMID:36215168	PMID:36244648	PMID:36373674	PMID:36424410	PMID:36604567	PMID:36652389
PMID:36688959	PMID:36736316	PMID:37071682	PMID:37232246	PMID:37398436	PMID:37433992	PMID:37499664	PMID:37616343	PMID:37747077	PMID:37827155	PMID:38087057	PMID:38280479
PMID:38334954	PMID:38561375	PMID:38569033	PMID:38697112	PMID:39147351

Genomics

Comparative Map Data

RCC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	28,506,043 - 28,538,989 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	28,505,943 - 28,539,300 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	28,832,555 - 28,865,501 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	28,717,332 - 28,738,194 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	28,653,183 - 28,686,118	NCBI
Celera	1	27,228,232 - 27,261,474 (+)	NCBI		Celera
Cytogenetic Map	1	p35.3	NCBI
HuRef	1	27,086,264 - 27,119,463 (+)	NCBI		HuRef
CHM1_1	1	28,947,946 - 28,981,201 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	28,347,999 - 28,380,949 (+)	NCBI		T2T-CHM13v2.0

Rcc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	132,059,230 - 132,073,061 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	132,059,230 - 132,080,916 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	132,331,919 - 132,345,750 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	132,331,919 - 132,353,605 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	131,887,838 - 131,901,577 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	131,603,999 - 131,617,738 (-)	NCBI		MGSCv36	mm8
Celera	4	130,492,831 - 130,506,571 (-)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	65.2	NCBI

Rcc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	149,810,037 - 149,828,475 (-)	NCBI		GRCr8
mRatBN7.2	5	144,526,025 - 144,544,445 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	144,526,025 - 144,544,577 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	147,226,563 - 147,244,220 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	148,996,458 - 149,014,116 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	148,984,701 - 149,002,345 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	150,508,840 - 150,531,062 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	150,509,040 - 150,525,254 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	5	142,957,255 - 142,974,902 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Rcc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	7,612,784 - 7,643,275 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	7,612,784 - 7,643,275 (+)	NCBI	ChiLan1.0	ChiLan1.0

RCC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	198,307,052 - 198,329,284 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	197,426,225 - 197,448,484 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	27,784,488 - 27,806,728 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	28,819,422 - 28,841,266 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	28,820,815 - 28,841,773 (+)	Ensembl	panpan1.1		panPan2

RCC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	71,948,159 - 71,972,902 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	71,948,165 - 71,964,353 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	68,524,663 - 68,540,842 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	72,507,102 - 72,531,854 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	72,507,108 - 72,530,338 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	69,335,321 - 69,351,510 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	70,343,443 - 70,359,626 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	71,341,326 - 71,357,632 (-)	NCBI		UU_Cfam_GSD_1.0

Rcc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	46,804,062 - 46,822,132 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	12,635,175 - 12,647,231 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	12,635,175 - 12,646,907 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RCC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	85,546,024 - 85,565,866 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	85,540,766 - 85,565,869 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	79,351,068 - 79,378,340 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RCC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	104,256,895 - 104,279,948 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	104,257,877 - 104,278,458 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	12,221,461 - 12,246,700 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rcc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	12,326,738 - 12,362,213 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	12,316,976 - 12,360,673 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RCC1
21 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 1p36.11-35.2(chr1:26963045-32279045)x3	copy number gain	See cases [RCV000051801]	Chr1:26963045..32279045 [GRCh38] Chr1:27289536..32744646 [GRCh37] Chr1:27162123..32517233 [NCBI36] Chr1:1p36.11-35.2	pathogenic
GRCh38/hg38 1p35.3-35.1(chr1:28424867-33122854)x1	copy number loss	See cases [RCV000135447]	Chr1:28424867..33122854 [GRCh38] Chr1:28751378..33588455 [GRCh37] Chr1:28623965..33361042 [NCBI36] Chr1:1p35.3-35.1	pathogenic
GRCh38/hg38 1p35.3(chr1:28298657-28634562)x1	copy number loss	See cases [RCV000137656]	Chr1:28298657..28634562 [GRCh38] Chr1:28625168..28961074 [GRCh37] Chr1:28497755..28833661 [NCBI36] Chr1:1p35.3	uncertain significance
GRCh38/hg38 1p35.3(chr1:27919199-28607226)x3	copy number gain	See cases [RCV000137584]	Chr1:27919199..28607226 [GRCh38] Chr1:28245710..28933738 [GRCh37] Chr1:28118297..28806325 [NCBI36] Chr1:1p35.3	uncertain significance
GRCh38/hg38 1p36.11-34.2(chr1:24381206-41401517)x3	copy number gain	See cases [RCV000138891]	Chr1:24381206..41401517 [GRCh38] Chr1:24707696..41886350 [GRCh37] Chr1:24580283..41658937 [NCBI36] Chr1:1p36.11-34.2	pathogenic
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3	copy number loss	not provided [RCV000762767]	Chr1:20608823..120546301 [GRCh37] Chr1:1p36.12-12	likely benign
GRCh37/hg19 1p35.3(chr1:28292253-28969539)x3	copy number gain	See cases [RCV000240431]	Chr1:28292253..28969539 [GRCh37] Chr1:1p35.3	uncertain significance
GRCh37/hg19 1p35.3(chr1:28666901-28929761)x3	copy number gain	See cases [RCV000448758]	Chr1:28666901..28929761 [GRCh37] Chr1:1p35.3	uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3	copy number gain	See cases [RCV000510383]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)	copy number gain	See cases [RCV000510926]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
NM_001381865.2(RCC1):c.544G>A (p.Asp182Asn)	single nucleotide variant	not specified [RCV004322045]	Chr1:28535263 [GRCh38] Chr1:28861775 [GRCh37] Chr1:1p35.3	uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3	copy number gain	not provided [RCV000736295]	Chr1:47851..249228449 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3	copy number gain	not provided [RCV000736305]	Chr1:82154..249218992 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3	copy number gain	Global developmental delay [RCV000787285]	Chr1:103343285..103455144 [GRCh37] Chr1:1p36.22-21.1	uncertain significance
NM_001381865.2(RCC1):c.13C>A (p.Arg5Ser)	single nucleotide variant	not specified [RCV004303036]	Chr1:28529879 [GRCh38] Chr1:28856391 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.1054T>A (p.Cys352Ser)	single nucleotide variant	not specified [RCV004293936]	Chr1:28536863 [GRCh38] Chr1:28863375 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.1046C>T (p.Ser349Leu)	single nucleotide variant	not specified [RCV004282271]	Chr1:28536855 [GRCh38] Chr1:28863367 [GRCh37] Chr1:1p35.3	uncertain significance
GRCh37/hg19 1p36.11-35.1(chr1:27543877-32819121)	copy number gain	not specified [RCV002052559]	Chr1:27543877..32819121 [GRCh37] Chr1:1p36.11-35.1	uncertain significance
GRCh37/hg19 1p35.3(chr1:28493687-29242679)x1	copy number loss	not provided [RCV001836514]	Chr1:28493687..29242679 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.1195C>T (p.Arg399Cys)	single nucleotide variant	See cases [RCV004593306]	Chr1:28537936 [GRCh38] Chr1:28864448 [GRCh37] Chr1:1p35.3	pathogenic
NM_001381865.2(RCC1):c.938G>A (p.Gly313Glu)	single nucleotide variant	not specified [RCV004166764]	Chr1:28536747 [GRCh38] Chr1:28863259 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.446A>G (p.Asn149Ser)	single nucleotide variant	not specified [RCV004160658]	Chr1:28535054 [GRCh38] Chr1:28861566 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.13C>T (p.Arg5Cys)	single nucleotide variant	not specified [RCV004074083]	Chr1:28529879 [GRCh38] Chr1:28856391 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.130G>A (p.Asp44Asn)	single nucleotide variant	not specified [RCV004103268]	Chr1:28531859 [GRCh38] Chr1:28858371 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.834A>C (p.Glu278Asp)	single nucleotide variant	not specified [RCV004225177]	Chr1:28536278 [GRCh38] Chr1:28862790 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.73+667A>C	single nucleotide variant	not specified [RCV004237044]	Chr1:28530606 [GRCh38] Chr1:28857118 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.749A>G (p.Tyr250Cys)	single nucleotide variant	not specified [RCV004249745]	Chr1:28535958 [GRCh38] Chr1:28862470 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.306C>A (p.Asp102Glu)	single nucleotide variant	not specified [RCV004275466]	Chr1:28532215 [GRCh38] Chr1:28858727 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.824C>T (p.Pro275Leu)	single nucleotide variant	not specified [RCV004260408]	Chr1:28536268 [GRCh38] Chr1:28862780 [GRCh37] Chr1:1p35.3	uncertain significance
GRCh38/hg38 1p36.33-35.1(chr1:99125-34026935)x3	copy number gain	Trisomy 12p [RCV003447845]	Chr1:99125..34026935 [GRCh38] Chr1:1p36.33-35.1	pathogenic
NM_001381865.2(RCC1):c.1147G>A (p.Glu383Lys)	single nucleotide variant	not specified [RCV004443606]	Chr1:28537888 [GRCh38] Chr1:28864400 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.1165G>A (p.Val389Met)	single nucleotide variant	not specified [RCV004443607]	Chr1:28537906 [GRCh38] Chr1:28864418 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.73+671G>A	single nucleotide variant	not specified [RCV004443609]	Chr1:28530610 [GRCh38] Chr1:28857122 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.418G>A (p.Val140Ile)	single nucleotide variant	not specified [RCV004443610]	Chr1:28532327 [GRCh38] Chr1:28858839 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.878C>T (p.Thr293Ile)	single nucleotide variant	not specified [RCV004443611]	Chr1:28536322 [GRCh38] Chr1:28862834 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.1146T>A (p.Asp382Glu)	single nucleotide variant	not specified [RCV004443605]	Chr1:28537887 [GRCh38] Chr1:28864399 [GRCh37] Chr1:1p35.3	likely benign
NM_001381865.2(RCC1):c.330G>C (p.Met110Ile)	single nucleotide variant	See cases [RCV004593303]	Chr1:28532239 [GRCh38] Chr1:28858751 [GRCh37] Chr1:1p35.3	likely pathogenic
NM_001381865.2(RCC1):c.238G>A (p.Val80Met)	single nucleotide variant	See cases [RCV004593301]	Chr1:28531967 [GRCh38] Chr1:28858479 [GRCh37] Chr1:1p35.3	likely pathogenic
NM_001381865.2(RCC1):c.280A>G (p.Asn94Asp)	single nucleotide variant	See cases [RCV004593302]	Chr1:28532189 [GRCh38] Chr1:28858701 [GRCh37] Chr1:1p35.3	likely pathogenic
NM_001381865.2(RCC1):c.416G>A (p.Arg139His)	single nucleotide variant	See cases [RCV004593304]	Chr1:28532325 [GRCh38] Chr1:28858837 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.604G>A (p.Gly202Ser)	single nucleotide variant	See cases [RCV004593305]	Chr1:28535323 [GRCh38] Chr1:28861835 [GRCh37] Chr1:1p35.3	likely pathogenic
NM_001381865.2(RCC1):c.127G>A (p.Gly43Ser)	single nucleotide variant	See cases [RCV004593300]	Chr1:28531856 [GRCh38] Chr1:28858368 [GRCh37] Chr1:1p35.3	pathogenic
NM_001381865.2(RCC1):c.73+661C>A	single nucleotide variant	not specified [RCV004657970]	Chr1:28530600 [GRCh38] Chr1:28857112 [GRCh37] Chr1:1p35.3	uncertain significance
NM_001381865.2(RCC1):c.14G>A (p.Arg5His)	single nucleotide variant	not specified [RCV004657971]	Chr1:28529880 [GRCh38] Chr1:28856392 [GRCh37] Chr1:1p35.3	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	3961
Count of miRNA genes:	1013
Interacting mature miRNAs:	1240
Transcripts:	ENST00000373831, ENST00000373832, ENST00000373833, ENST00000398958, ENST00000411533, ENST00000419074, ENST00000427469, ENST00000429051, ENST00000430407, ENST00000434290, ENST00000478232, ENST00000486790
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCh38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1576329	MYI9_H	Myocardial infarction susceptibility QTL 9 (human)	12		Myocardial infarction susceptibility	early-onset	1	7585503	33585503	Human
406919559	GWAS568535_H	systolic blood pressure QTL GWAS568535 (human)		3e-10	systolic blood pressure	systolic blood pressure (CMO:0000004)	1	28510931	28510932	Human
407418208	GWAS1067184_H	pulse pressure measurement QTL GWAS1067184 (human)		6e-14	pulse pressure measurement	pulse pressure (CMO:0000292)	1	28511686	28511687	Human
1576325	MYI1_H	Myocardial infarction susceptibility QTL 1 (human)	11.68	1e-12	Myocardial infarction susceptibility	early-onset	1	7585503	33585503	Human
1643380	BW316_H	Body weight QTL 316 (human)	2.62	0.0002	Body weight	BMI	1	7585503	33585503	Human
407397045	GWAS1046021_H	systolic blood pressure QTL GWAS1046021 (human)		2e-11	systolic blood pressure	systolic blood pressure (CMO:0000004)	1	28511686	28511687	Human
406964239	GWAS613215_H	COVID-19 QTL GWAS613215 (human)		0.0000006	COVID-19		1	28511063	28511064	Human
406967103	GWAS616079_H	nighttime rest measurement QTL GWAS616079 (human)		0.000002	nighttime rest measurement		1	28514428	28514429	Human

Markers in Region

D1S3211

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,864,710 - 28,864,911	UniSTS	GRCh37
Build 36	1	28,737,297 - 28,737,498	RGD	NCBI36
Celera	1	27,260,476 - 27,260,677	RGD
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,118,465 - 27,118,666	UniSTS

RH103048

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,865,517 - 28,865,648	UniSTS	GRCh37
Build 36	1	28,738,104 - 28,738,235	RGD	NCBI36
Celera	1	27,261,283 - 27,261,414	RGD
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,119,272 - 27,119,403	UniSTS
GeneMap99-GB4 RH Map	1	95.57	UniSTS

SHGC-74505

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,833,773 - 28,833,884	UniSTS	GRCh37
Build 36	1	28,706,360 - 28,706,471	RGD	NCBI36
Celera	1	27,229,550 - 27,229,661	RGD
Cytogenetic Map	1	p35.3	UniSTS
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,087,582 - 27,087,693	UniSTS
TNG Radiation Hybrid Map	1	13442.0	UniSTS
GeneMap99-GB4 RH Map	1	95.4	UniSTS
NCBI RH Map	1	165.8	UniSTS

G67872

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,861,574 - 28,861,811	UniSTS	GRCh37
Build 36	1	28,734,161 - 28,734,398	RGD	NCBI36
Celera	1	27,257,340 - 27,257,577	RGD
Cytogenetic Map	1	p35.3	UniSTS
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,115,329 - 27,115,566	UniSTS

A009U10

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,835,935 - 28,836,070	UniSTS	GRCh37
GRCh37	15	41,606,481 - 41,607,968	UniSTS	GRCh37
Build 36	1	28,708,522 - 28,708,657	RGD	NCBI36
Celera	15	18,374,458 - 18,375,945	UniSTS
Celera	1	27,231,712 - 27,231,847	RGD
Cytogenetic Map	1	p36.1	UniSTS
Cytogenetic Map	15	q15.1	UniSTS
HuRef	1	27,089,744 - 27,089,879	UniSTS
GeneMap99-GB4 RH Map	1	95.57	UniSTS
NCBI RH Map	1	142.5	UniSTS

SHGC-56851

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,865,559 - 28,865,655	UniSTS	GRCh37
Build 36	1	28,738,146 - 28,738,242	RGD	NCBI36
Celera	1	27,261,325 - 27,261,421	RGD
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,119,314 - 27,119,410	UniSTS

SHGC-32496

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,837,247 - 28,837,372	UniSTS	GRCh37
Build 36	1	28,709,834 - 28,709,959	RGD	NCBI36
Celera	1	27,233,024 - 27,233,149	RGD
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,091,056 - 27,091,181	UniSTS
Whitehead-RH Map	1	94.5	UniSTS
GeneMap99-G3 RH Map	1	1780.0	UniSTS

RH68391

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,837,195 - 28,837,372	UniSTS	GRCh37
Build 36	1	28,709,782 - 28,709,959	RGD	NCBI36
Celera	1	27,232,972 - 27,233,149	RGD
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,091,004 - 27,091,181	UniSTS
GeneMap99-GB4 RH Map	1	95.57	UniSTS

SHGC-36606

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,865,364 - 28,865,468	UniSTS	GRCh37
Build 36	1	28,737,951 - 28,738,055	RGD	NCBI36
Celera	1	27,261,130 - 27,261,234	RGD
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,119,119 - 27,119,223	UniSTS

G34830

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,865,269 - 28,865,404	UniSTS	GRCh37
Build 36	1	28,737,856 - 28,737,991	RGD	NCBI36
Celera	1	27,261,035 - 27,261,170	RGD
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,119,024 - 27,119,159	UniSTS

PRDX3-1

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	10	120,931,911 - 120,933,385	UniSTS	GRCh37
GRCh37	1	28,852,888 - 28,853,111	UniSTS	GRCh37
Celera	10	114,661,490 - 114,662,964	UniSTS
Celera	1	27,248,665 - 27,248,888	UniSTS
HuRef	1	27,106,697 - 27,106,920	UniSTS
HuRef	10	114,561,343 - 114,562,817	UniSTS

G32835

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	28,835,935 - 28,836,070	UniSTS	GRCh37
Celera	1	27,231,712 - 27,231,847	UniSTS
Cytogenetic Map	1	p36.1	UniSTS
HuRef	1	27,089,744 - 27,089,879	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2439	2788	2252	4973	1726	2351	6	624	1951	465	2269	7304	6471	53	3734	1	852	1744	1616	175	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001048194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001048195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001048199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001381865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001381866	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF498924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI198971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL513497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC001589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC010067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC069198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF590413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF667678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM546148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ436549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU501614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU622451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX109495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB985055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR407693	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CV811053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D00591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KU177974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KU177975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KU177976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	S75708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X12654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000373831 ⟹ ENSP00000362937

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,518,257 - 28,538,164 (+)	Ensembl

Ensembl Acc Id:

ENST00000373832 ⟹ ENSP00000362938

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,518,136 - 28,538,983 (+)	Ensembl

Ensembl Acc Id:

ENST00000373833 ⟹ ENSP00000362939

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,506,057 - 28,539,300 (+)	Ensembl

Ensembl Acc Id:

ENST00000398958 ⟹ ENSP00000381931

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,505,943 - 28,539,196 (+)	Ensembl

Ensembl Acc Id:

ENST00000411533 ⟹ ENSP00000413644

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,518,266 - 28,536,875 (+)	Ensembl

Ensembl Acc Id:

ENST00000419074 ⟹ ENSP00000402260

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,510,077 - 28,536,026 (+)	Ensembl

Ensembl Acc Id:

ENST00000427469 ⟹ ENSP00000402740

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,505,990 - 28,535,899 (+)	Ensembl

Ensembl Acc Id:

ENST00000429051

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,531,935 - 28,535,905 (+)	Ensembl

Ensembl Acc Id:

ENST00000430407 ⟹ ENSP00000394650

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,518,695 - 28,536,293 (+)	Ensembl

Ensembl Acc Id:

ENST00000434290 ⟹ ENSP00000405258

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,506,056 - 28,535,919 (+)	Ensembl

Ensembl Acc Id:

ENST00000478232

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,536,093 - 28,537,898 (+)	Ensembl

Ensembl Acc Id:

ENST00000486790 ⟹ ENSP00000472057

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,518,626 - 28,531,818 (+)	Ensembl

Ensembl Acc Id:

ENST00000649185 ⟹ ENSP00000497402

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,505,980 - 28,538,968 (+)	Ensembl

Ensembl Acc Id:

ENST00000683442 ⟹ ENSP00000508074

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	28,506,043 - 28,538,989 (+)	Ensembl

RefSeq Acc Id:

NM_001048194 ⟹ NP_001041659

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,518,226 - 28,538,989 (+)	NCBI
GRCh37	1	28,832,455 - 28,865,708 (+)	ENTREZGENE
Build 36	1	28,717,332 - 28,738,194 (+)	NCBI Archive
HuRef	1	27,086,264 - 27,119,463 (+)	ENTREZGENE
CHM1_1	1	28,960,278 - 28,981,201 (+)	NCBI
T2T-CHM13v2.0	1	28,360,182 - 28,380,949 (+)	NCBI

Sequence:

show sequence

AGAGGCCTGCAGAGCGCATGCTCTGGGGCAGTTCGCGGCCCGGCGGGGAGCGCCGGAGTTCCTT
GTGGCCGACGTGCACCAAGGACAGGAAGATGTCACCCAAGCGCATAGCTAAAAGAAGGTCCCCC
CCAGCAGATGCCATCCCCAAAAGCAAGAAGGTGAAGGACACGAGGGCCGCTGCCTCCCGCCGCG
TTCCTGGCGCCCGCTCCTGCCAAGGTGCCTGCGGGCCGAGCCCTCCTGACCAGAAAACCCGACC
AGTCTCACACAGGTCCCACAGCACAGAACCCGGCTTGGTGCTGACACTAGGCCAGGGCGACGTG
GGCCAGCTGGGGCTGGGTGAGAATGTGATGGAGAGGAAGAAGCCGGCCCTGGTATCCATTCCGG
AGGATGTTGTGCAGGCTGAGGCTGGGGGCATGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGT
CTATTCCTTCGGCTGCAATGATGAGGGTGCCCTGGGAAGGGACACATCAGTGGAGGGCTCGGAG
ATGGTCCCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAGGTGTCAGCAGGAGACAGTCACA
CAGCAGCCCTCACCGATGATGGCCGTGTCTTCCTCTGGGGCTCCTTCCGGGACAATAACGGTGT
GATTGGACTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCT
GTGGTAAAGGTGGCCTCAGGAAACGACCACTTGGTGATGCTGACAGCTGATGGTGACCTCTACA
CCTTGGGCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGG
CCGGCAAGGCCTCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGG
GGCCACGTGAGATTCCAGGATGCCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCCATGAGG
GCCACGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTGGAACTCCGGGCACAGAATCTTG
CTTCATACCCCAGAACCTAACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGT
GGCCAGCACCATACAGTCTGCATGGATTCGGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGT
ATGGGCGGCTGGGCCTTGGAGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATCTCCAGGCT
GCCTGCTGTCTCCTCGGTGGCTTGTGGGGCCTCTGTGGGGTATGCTGTGACCAAGGATGGTCGT
GTTTTCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCACAGGGCAGGATGAGGACGCCTGGA
GCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACCGTGTGGTCTTATCTGTGTCCAGCGGGGG
CCAGCATACAGTCTTATTAGTCAAGGACAAAGAACAGAGCTGATGAAGCCTCTGAGGGCCTGGC
TTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGC
CTCTCCCCAGCCCTGAGCACTGTGTCAGTTCCTGCCTTTTCTCATCAGCAGAACAGAATCCTTT
TCCTCTTTTCCTTCCTCCTCTTTGGAATTTTCCTGGGACCTACAGAATAAAGGGGGGGATGGAC
AGGGGGTTTTCAAAAGGAACATGGCTCACTCAGAGCTATATGGTTAGACGTTTCTCCCCTTTTC
CCTACCTTCCATGGTCCTGGTTGGCCCTGGCTTTGCCTACTAGAAAACCAAAACTTCCCCCCTG
GGGTTTTGTGCCCACTCTCTGAGAAGTTGGGGCTCCATCAAGCCCCATTCTAGTCATGTGCCCC
TTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGGTACAGTCATAAGAGCCATCTGTCACGGA
CCCACGCCCAGAGGAACGTGCAGAAAAAAGCAGAGCTACATGGCTGTGGGCAACTATAAGCCAA
ATATTTGGCTCAGAACAGGTGTCCATGGGACAAAAAAGAACGATCCTCCACTTGACCAAGAAAA
AAGTGATTCTCCCAGAAGCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTA
CCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCA
GAGCAGAGCAGGGTATGGGGTGGGGAGAGAGGGTGGAGGGTTTTATAAACAAACTTAACAGCAA
TATTGAAAGGAGGTGGGGGATTGAGGGAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGA
GATGGAAACAGCAACTTGTACAGTGGCTGAGAAAATAGGATATAGTTTTGATTTTTTTAATTGT
AAAATATTTTGGAGGGAGAACAAAATCTTTTAACATTTTGAATAAATTTAGAGTTTTATAAAAT
A

hide sequence

RefSeq Acc Id:

NM_001048195 ⟹ NP_001041660

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,518,226 - 28,538,989 (+)	NCBI
GRCh37	1	28,832,455 - 28,865,708 (+)	ENTREZGENE
Build 36	1	28,717,332 - 28,738,194 (+)	NCBI Archive
HuRef	1	27,086,264 - 27,119,463 (+)	ENTREZGENE
CHM1_1	1	28,960,278 - 28,981,201 (+)	NCBI
T2T-CHM13v2.0	1	28,360,182 - 28,380,949 (+)	NCBI

Sequence:

show sequence

AGAGGCCTGCAGAGCGCATGCTCTGGGGCAGTTCGCGGCCCGGCGGGGAGCGCCGGAGTTCCTT
GTGGCCGACGTGCACCAAGGACAGGAAGATGTCACCCAAGCGCATAGCTAAAAGAAGGTCCCCC
CCAGCAGATGCCATCCCCAAAAGCAAGAAGGTGAAGGACACGAGGGCCGCTGCCTCCCGCCGCG
TTCCTGGCGCCCGCTCCTGCCAAGTCTCACACAGGTCCCACAGCACAGAACCCGGCTTGGTGCT
GACACTAGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAATGTGATGGAGAGGAAGAAG
CCGGCCCTGGTATCCATTCCGGAGGATGTTGTGCAGGCTGAGGCTGGGGGCATGCACACCGTGT
GTCTAAGCAAAAGTGGCCAGGTCTATTCCTTCGGCTGCAATGATGAGGGTGCCCTGGGAAGGGA
CACATCAGTGGAGGGCTCGGAGATGGTCCCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAG
GTGTCAGCAGGAGACAGTCACACAGCAGCCCTCACCGATGATGGCCGTGTCTTCCTCTGGGGCT
CCTTCCGGGACAATAACGGTGTGATTGGACTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGT
GCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCAGGAAACGACCACTTGGTGATGCTG
ACAGCTGATGGTGACCTCTACACCTTGGGCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCCTG
AGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTGGTCCCCAAGTGTGTGAT
GCTGAAATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAGGATGCCTTTTGTGGTGCCTATTTC
ACCTTTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTG
GAACTCCGGGCACAGAATCTTGCTTCATACCCCAGAACCTAACATCCTTCAAGAATTCCACCAA
GTCCTGGGTGGGCTTCTCTGGTGGCCAGCACCATACAGTCTGCATGGATTCGGAAGGAAAAGCA
TACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGCCTTGGAGAGGGTGCTGAGGAGAAGAGCA
TACCCACCCTCATCTCCAGGCTGCCTGCTGTCTCCTCGGTGGCTTGTGGGGCCTCTGTGGGGTA
TGCTGTGACCAAGGATGGTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCACA
GGGCAGGATGAGGACGCCTGGAGCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACCGTGTGG
TCTTATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGTCAAGGACAAAGAACAGAGCTG
ATGAAGCCTCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGTG
ACAGCTGCAGATGGCAGCGGGCCTCTCCCCAGCCCTGAGCACTGTGTCAGTTCCTGCCTTTTCT
CATCAGCAGAACAGAATCCTTTTCCTCTTTTCCTTCCTCCTCTTTGGAATTTTCCTGGGACCTA
CAGAATAAAGGGGGGGATGGACAGGGGGTTTTCAAAAGGAACATGGCTCACTCAGAGCTATATG
GTTAGACGTTTCTCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCCCTGGCTTTGCCTACTA
GAAAACCAAAACTTCCCCCCTGGGGTTTTGTGCCCACTCTCTGAGAAGTTGGGGCTCCATCAAG
CCCCATTCTAGTCATGTGCCCCTTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGGTACAGT
CATAAGAGCCATCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAAAAAAGCAGAGCTACATG
GCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATGGGACAAAAAAGAACG
ATCCTCCACTTGACCAAGAAAAAAGTGATTCTCCCAGAAGCACAAAGCATACTCTTGCCCCTCA
GGTGTTGCTTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCG
CAAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTATGGGGTGGGGAGAGAGGGTGGAGGGTT
TTATAAACAAACTTAACAGCAATATTGAAAGGAGGTGGGGGATTGAGGGAGGGACAGAGTGTTG
GAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACAGTGGCTGAGAAAATAGGATA
TAGTTTTGATTTTTTTAATTGTAAAATATTTTGGAGGGAGAACAAAATCTTTTAACATTTTGAA
TAAATTTAGAGTTTTATAAAATA

hide sequence

RefSeq Acc Id:

NM_001048199 ⟹ NP_001041664

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,506,043 - 28,538,989 (+)	NCBI
GRCh37	1	28,832,455 - 28,865,708 (+)	NCBI
HuRef	1	27,086,264 - 27,119,463 (+)	NCBI
CHM1_1	1	28,947,946 - 28,981,201 (+)	NCBI
T2T-CHM13v2.0	1	28,347,999 - 28,380,949 (+)	NCBI

Sequence:

show sequence

CCTTTTTGGAGACAGATTCGCAGTGGTCGCTTCTTCTCCTTGGATTTGTTAAGGATTCCAAGTA
ACTCTTATTTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCATTGACATTTAATTTTAGGGT
CCTTTATATAGAAGGGAGAGTAGGACAGGAAGATGTCACCCAAGCGCATAGCTAAAAGAAGGTC
CCCCCCAGCAGATGCCATCCCCAAAAGCAAGAAGGTGAAGGTCTCACACAGGTCCCACAGCACA
GAACCCGGCTTGGTGCTGACACTAGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAATG
TGATGGAGAGGAAGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTGTGCAGGCTGAGGCTGG
GGGCATGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCTATTCCTTCGGCTGCAATGATGAG
GGTGCCCTGGGAAGGGACACATCAGTGGAGGGCTCGGAGATGGTCCCTGGGAAAGTGGAGCTGC
AAGAGAAGGTGGTACAGGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCACCGATGATGGCCG
TGTCTTCCTCTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGGACTGTTGGAGCCCATGAAG
AAGAGCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCAGGAAACG
ACCACTTGGTGATGCTGACAGCTGATGGTGACCTCTACACCTTGGGCTGCGGGGAACAGGGCCA
GCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTG
GTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAGGATGCCT
TTTGTGGTGCCTATTTCACCTTTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTCTC
CAACTACCATCAGCTTGGAACTCCGGGCACAGAATCTTGCTTCATACCCCAGAACCTAACATCC
TTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCACCATACAGTCTGCATGG
ATTCGGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGCCTTGGAGAGGG
TGCTGAGGAGAAGAGCATACCCACCCTCATCTCCAGGCTGCCTGCTGTCTCCTCGGTGGCTTGT
GGGGCCTCTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTTCGCCTGGGGCATGGGCACCA
ACTACCAGCTGGGCACAGGGCAGGATGAGGACGCCTGGAGCCCTGTGGAGATGATGGGCAAACA
GCTGGAGAACCGTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGTCAAG
GACAAAGAACAGAGCTGATGAAGCCTCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCAC
AGAACAGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCTCTCCCCAGCCCTGAGCACTGTGT
CAGTTCCTGCCTTTTCTCATCAGCAGAACAGAATCCTTTTCCTCTTTTCCTTCCTCCTCTTTGG
AATTTTCCTGGGACCTACAGAATAAAGGGGGGGATGGACAGGGGGTTTTCAAAAGGAACATGGC
TCACTCAGAGCTATATGGTTAGACGTTTCTCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGC
CCTGGCTTTGCCTACTAGAAAACCAAAACTTCCCCCCTGGGGTTTTGTGCCCACTCTCTGAGAA
GTTGGGGCTCCATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTGTCCCTAACAGTCCACAGG
CAAACAAATGGTACAGTCATAAGAGCCATCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAA
AAAAGCAGAGCTACATGGCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGAACAGGTGTCCA
TGGGACAAAAAAGAACGATCCTCCACTTGACCAAGAAAAAAGTGATTCTCCCAGAAGCACAAAG
CATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAG
CCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTATGGGGTGGGG
AGAGAGGGTGGAGGGTTTTATAAACAAACTTAACAGCAATATTGAAAGGAGGTGGGGGATTGAG
GGAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACAGTG
GCTGAGAAAATAGGATATAGTTTTGATTTTTTTAATTGTAAAATATTTTGGAGGGAGAACAAAA
TCTTTTAACATTTTGAATAAATTTAGAGTTTTATAAAATA

hide sequence

RefSeq Acc Id:

NM_001269 ⟹ NP_001260

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,518,226 - 28,538,989 (+)	NCBI
GRCh37	1	28,832,455 - 28,865,708 (+)	ENTREZGENE
Build 36	1	28,717,332 - 28,738,194 (+)	NCBI Archive
HuRef	1	27,086,264 - 27,119,463 (+)	ENTREZGENE
CHM1_1	1	28,960,278 - 28,981,201 (+)	NCBI
T2T-CHM13v2.0	1	28,360,182 - 28,380,949 (+)	NCBI

Sequence:

show sequence

AGAGGCCTGCAGAGCGCATGCTCTGGGGCAGTTCGCGGCCCGGCGGGGAGCGCCGGAGTTCCTT
GTGGCCGACGTGCACCAAGGACAGGAAGATGTCACCCAAGCGCATAGCTAAAAGAAGGTCCCCC
CCAGCAGATGCCATCCCCAAAAGCAAGAAGGTGAAGGTCTCACACAGGTCCCACAGCACAGAAC
CCGGCTTGGTGCTGACACTAGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAATGTGAT
GGAGAGGAAGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTGTGCAGGCTGAGGCTGGGGGC
ATGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCTATTCCTTCGGCTGCAATGATGAGGGTG
CCCTGGGAAGGGACACATCAGTGGAGGGCTCGGAGATGGTCCCTGGGAAAGTGGAGCTGCAAGA
GAAGGTGGTACAGGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCACCGATGATGGCCGTGTC
TTCCTCTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGGACTGTTGGAGCCCATGAAGAAGA
GCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCAGGAAACGACCA
CTTGGTGATGCTGACAGCTGATGGTGACCTCTACACCTTGGGCTGCGGGGAACAGGGCCAGCTA
GGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTGGTCC
CCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAGGATGCCTTTTG
TGGTGCCTATTTCACCTTTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTCTCCAAC
TACCATCAGCTTGGAACTCCGGGCACAGAATCTTGCTTCATACCCCAGAACCTAACATCCTTCA
AGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCACCATACAGTCTGCATGGATTC
GGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGCCTTGGAGAGGGTGCT
GAGGAGAAGAGCATACCCACCCTCATCTCCAGGCTGCCTGCTGTCTCCTCGGTGGCTTGTGGGG
CCTCTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTTCGCCTGGGGCATGGGCACCAACTA
CCAGCTGGGCACAGGGCAGGATGAGGACGCCTGGAGCCCTGTGGAGATGATGGGCAAACAGCTG
GAGAACCGTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGTCAAGGACA
AAGAACAGAGCTGATGAAGCCTCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAA
CAGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCTCTCCCCAGCCCTGAGCACTGTGTCAGT
TCCTGCCTTTTCTCATCAGCAGAACAGAATCCTTTTCCTCTTTTCCTTCCTCCTCTTTGGAATT
TTCCTGGGACCTACAGAATAAAGGGGGGGATGGACAGGGGGTTTTCAAAAGGAACATGGCTCAC
TCAGAGCTATATGGTTAGACGTTTCTCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCCCTG
GCTTTGCCTACTAGAAAACCAAAACTTCCCCCCTGGGGTTTTGTGCCCACTCTCTGAGAAGTTG
GGGCTCCATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTGTCCCTAACAGTCCACAGGCAAA
CAAATGGTACAGTCATAAGAGCCATCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAAAAAA
GCAGAGCTACATGGCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATGGG
ACAAAAAAGAACGATCCTCCACTTGACCAAGAAAAAAGTGATTCTCCCAGAAGCACAAAGCATA
CTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAA
CGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTATGGGGTGGGGAGAG
AGGGTGGAGGGTTTTATAAACAAACTTAACAGCAATATTGAAAGGAGGTGGGGGATTGAGGGAG
GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACAGTGGCTG
AGAAAATAGGATATAGTTTTGATTTTTTTAATTGTAAAATATTTTGGAGGGAGAACAAAATCTT
TTAACATTTTGAATAAATTTAGAGTTTTATAAAATA

hide sequence

RefSeq Acc Id:

NM_001381865 ⟹ NP_001368794

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,506,043 - 28,538,989 (+)	NCBI
T2T-CHM13v2.0	1	28,347,999 - 28,380,949 (+)	NCBI

Sequence:

show sequence

CCTTTTTGGAGACAGATTCGCAGTGGTCGCTTCTTCTCCTTGGATTTGTTAAGGATTCCAAGTA
ACTCTTATTTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCATTGACATTTAATTTTAGGGT
CCTTTATATAGAAGGGAGAGTAGCTACATGAATGTGTAAGATCTTGGAGGAAGACAGCAGAGAG
AGAGAGAGAGATCAGAGATCCCAGGGTTAAAAGTTGGAGAAATTTCACAGTACATCATCCAAAA
GAGGAGTCCATGATGGAGGCAGAGGTAAACTTGGAGAGGACAGGAAGATGTCACCCAAGCGCAT
AGCTAAAAGAAGGTCCCCCCCAGCAGATGCCATCCCCAAAAGCAAGAAGGTGAAGGTCTCACAC
AGGTCCCACAGCACAGAACCCGGCTTGGTGCTGACACTAGGCCAGGGCGACGTGGGCCAGCTGG
GGCTGGGTGAGAATGTGATGGAGAGGAAGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTGT
GCAGGCTGAGGCTGGGGGCATGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCTATTCCTTC
GGCTGCAATGATGAGGGTGCCCTGGGAAGGGACACATCAGTGGAGGGCTCGGAGATGGTCCCTG
GGAAAGTGGAGCTGCAAGAGAAGGTGGTACAGGTGTCAGCAGGAGACAGTCACACAGCAGCCCT
CACCGATGATGGCCGTGTCTTCCTCTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGGACTG
TTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGG
TGGCCTCAGGAAACGACCACTTGGTGATGCTGACAGCTGATGGTGACCTCTACACCTTGGGCTG
CGGGGAACAGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGC
CTCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGGGGCCACGTGA
GATTCCAGGATGCCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCCATGAGGGCCACGTGTA
CGGCTTCGGCCTCTCCAACTACCATCAGCTTGGAACTCCGGGCACAGAATCTTGCTTCATACCC
CAGAACCTAACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCACC
ATACAGTCTGCATGGATTCGGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCT
GGGCCTTGGAGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATCTCCAGGCTGCCTGCTGTC
TCCTCGGTGGCTTGTGGGGCCTCTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTTCGCCT
GGGGCATGGGCACCAACTACCAGCTGGGCACAGGGCAGGATGAGGACGCCTGGAGCCCTGTGGA
GATGATGGGCAAACAGCTGGAGAACCGTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATACA
GTCTTATTAGTCAAGGACAAAGAACAGAGCTGATGAAGCCTCTGAGGGCCTGGCTTCTGTCCTG
CACAACCTCCCTCACAGAACAGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCTCTCCCCAG
CCCTGAGCACTGTGTCAGTTCCTGCCTTTTCTCATCAGCAGAACAGAATCCTTTTCCTCTTTTC
CTTCCTCCTCTTTGGAATTTTCCTGGGACCTACAGAATAAAGGGGGGGATGGACAGGGGGTTTT
CAAAAGGAACATGGCTCACTCAGAGCTATATGGTTAGACGTTTCTCCCCTTTTCCCTACCTTCC
ATGGTCCTGGTTGGCCCTGGCTTTGCCTACTAGAAAACCAAAACTTCCCCCCTGGGGTTTTGTG
CCCACTCTCTGAGAAGTTGGGGCTCCATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTGTCC
CTAACAGTCCACAGGCAAACAAATGGTACAGTCATAAGAGCCATCTGTCACGGACCCACGCCCA
GAGGAACGTGCAGAAAAAAGCAGAGCTACATGGCTGTGGGCAACTATAAGCCAAATATTTGGCT
CAGAACAGGTGTCCATGGGACAAAAAAGAACGATCCTCCACTTGACCAAGAAAAAAGTGATTCT
CCCAGAAGCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATT
CGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
GGGTATGGGGTGGGGAGAGAGGGTGGAGGGTTTTATAAACAAACTTAACAGCAATATTGAAAGG
AGGTGGGGGATTGAGGGAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACA
GCAACTTGTACAGTGGCTGAGAAAATAGGATATAGTTTTGATTTTTTTAATTGTAAAATATTTT
GGAGGGAGAACAAAATCTTTTAACATTTTGAATAAATTTAGAGTTTTATAAAATA

hide sequence

RefSeq Acc Id:

NM_001381866 ⟹ NP_001368795

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,506,043 - 28,538,989 (+)	NCBI
T2T-CHM13v2.0	1	28,347,999 - 28,380,949 (+)	NCBI

Sequence:

show sequence

CCTTTTTGGAGACAGATTCGCAGTGGTCGCTTCTTCTCCTTGGATTTGTTAAGGATTCCAAGTA
ACTCTTATTTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCATTGACATTTAATTTTAGGGT
CCTTTATATAGAAGGGAGACTACATGAATGTGTAAGATCTTGGAGGAAGACAGCAGAGAGAGAG
AGAGAGATCAGAGATCCCAGGGTTAAAAGTTGGAGAAATTTCACAGTACATCATCCAAAAGAGG
AGTCCATGATGGAGGCAGAGGTAAACTTGGAGAGGACAGGAAGATGTCACCCAAGCGCATAGCT
AAAAGAAGGTCCCCCCCAGCAGATGCCATCCCCAAAAGCAAGAAGGTGAAGGTCTCACACAGGT
CCCACAGCACAGAACCCGGCTTGGTGCTGACACTAGGCCAGGGCGACGTGGGCCAGCTGGGGCT
GGGTGAGAATGTGATGGAGAGGAAGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTGTGCAG
GCTGAGGCTGGGGGCATGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCTATTCCTTCGGCT
GCAATGATGAGGGTGCCCTGGGAAGGGACACATCAGTGGAGGGCTCGGAGATGGTCCCTGGGAA
AGTGGAGCTGCAAGAGAAGGTGGTACAGGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCACC
GATGATGGCCGTGTCTTCCTCTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGGACTGTTGG
AGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGC
CTCAGGAAACGACCACTTGGTGATGCTGACAGCTGATGGTGACCTCTACACCTTGGGCTGCGGG
GAACAGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCG
AACGACTCCTGGTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGGGGCCACGTGAGATT
CCAGGATGCCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCCATGAGGGCCACGTGTACGGC
TTCGGCCTCTCCAACTACCATCAGCTTGGAACTCCGGGCACAGAATCTTGCTTCATACCCCAGA
ACCTAACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCACCATAC
AGTCTGCATGGATTCGGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGC
CTTGGAGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATCTCCAGGCTGCCTGCTGTCTCCT
CGGTGGCTTGTGGGGCCTCTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTTCGCCTGGGG
CATGGGCACCAACTACCAGCTGGGCACAGGGCAGGATGAGGACGCCTGGAGCCCTGTGGAGATG
ATGGGCAAACAGCTGGAGAACCGTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATACAGTCT
TATTAGTCAAGGACAAAGAACAGAGCTGATGAAGCCTCTGAGGGCCTGGCTTCTGTCCTGCACA
ACCTCCCTCACAGAACAGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCTCTCCCCAGCCCT
GAGCACTGTGTCAGTTCCTGCCTTTTCTCATCAGCAGAACAGAATCCTTTTCCTCTTTTCCTTC
CTCCTCTTTGGAATTTTCCTGGGACCTACAGAATAAAGGGGGGGATGGACAGGGGGTTTTCAAA
AGGAACATGGCTCACTCAGAGCTATATGGTTAGACGTTTCTCCCCTTTTCCCTACCTTCCATGG
TCCTGGTTGGCCCTGGCTTTGCCTACTAGAAAACCAAAACTTCCCCCCTGGGGTTTTGTGCCCA
CTCTCTGAGAAGTTGGGGCTCCATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTGTCCCTAA
CAGTCCACAGGCAAACAAATGGTACAGTCATAAGAGCCATCTGTCACGGACCCACGCCCAGAGG
AACGTGCAGAAAAAAGCAGAGCTACATGGCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGA
ACAGGTGTCCATGGGACAAAAAAGAACGATCCTCCACTTGACCAAGAAAAAAGTGATTCTCCCA
GAAGCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATTCGGC
TTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGT
ATGGGGTGGGGAGAGAGGGTGGAGGGTTTTATAAACAAACTTAACAGCAATATTGAAAGGAGGT
GGGGGATTGAGGGAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAA
CTTGTACAGTGGCTGAGAAAATAGGATATAGTTTTGATTTTTTTAATTGTAAAATATTTTGGAG
GGAGAACAAAATCTTTTAACATTTTGAATAAATTTAGAGTTTTATAAAATA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001041659	(Get FASTA)	NCBI Sequence Viewer
	NP_001041660	(Get FASTA)	NCBI Sequence Viewer
	NP_001041664	(Get FASTA)	NCBI Sequence Viewer
	NP_001260	(Get FASTA)	NCBI Sequence Viewer
	NP_001368794	(Get FASTA)	NCBI Sequence Viewer
	NP_001368795	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB32653	(Get FASTA)	NCBI Sequence Viewer
	AAH10067	(Get FASTA)	NCBI Sequence Viewer
	AAH69198	(Get FASTA)	NCBI Sequence Viewer
	AAM21072	(Get FASTA)	NCBI Sequence Viewer
	ALQ33432	(Get FASTA)	NCBI Sequence Viewer
	ALQ33433	(Get FASTA)	NCBI Sequence Viewer
	ALQ33434	(Get FASTA)	NCBI Sequence Viewer
	BAA00469	(Get FASTA)	NCBI Sequence Viewer
	CAA31182	(Get FASTA)	NCBI Sequence Viewer
	CAG28621	(Get FASTA)	NCBI Sequence Viewer
	EAX07690	(Get FASTA)	NCBI Sequence Viewer
	EAX07691	(Get FASTA)	NCBI Sequence Viewer
	EAX07692	(Get FASTA)	NCBI Sequence Viewer
	EAX07693	(Get FASTA)	NCBI Sequence Viewer
	EAX07694	(Get FASTA)	NCBI Sequence Viewer
	EAX07695	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000362937
	ENSP00000362937.3
	ENSP00000362938
	ENSP00000362938.1
	ENSP00000362939
	ENSP00000362939.5
	ENSP00000381931
	ENSP00000381931.2
	ENSP00000394650.1
	ENSP00000402260.1
	ENSP00000402740.1
	ENSP00000405258.2
	ENSP00000413644
	ENSP00000413644.1
	ENSP00000472057.1
	ENSP00000497402.1
	ENSP00000508074
	ENSP00000508074.1
GenBank Protein	P18754	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001041659 ⟸ NM_001048194
- Peptide Label:	isoform a
- UniProtKB:	A0A0S2Z404 (UniProtKB/TrEMBL), C9JW69 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPKRIAKRRSPPADAIPKSKKVKDTRAAASRRVPGARSCQGACGPSPPDQKTRPVSHRSHSTE PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG ALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKK SMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSF KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACG ASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKD KEQS hide sequence

RefSeq Acc Id:	NP_001041660 ⟸ NM_001048195
- Peptide Label:	isoform b
- UniProtKB:	A0A0S2Z3I4 (UniProtKB/TrEMBL), C9JW69 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPKRIAKRRSPPADAIPKSKKVKDTRAAASRRVPGARSCQVSHRSHSTEPGLVLTLGQGDVGQ LGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV PGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVV KVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGH VRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQ HHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVF AWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQS hide sequence

RefSeq Acc Id:	NP_001260 ⟸ NM_001269
- Peptide Label:	isoform c
- UniProtKB:	Q16269 (UniProtKB/Swiss-Prot), Q6NT97 (UniProtKB/Swiss-Prot), P18754 (UniProtKB/Swiss-Prot), Q5T081 (UniProtKB/TrEMBL), A0A0S2Z3J1 (UniProtKB/TrEMBL), C9JW69 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGD SHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGD LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS HEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR AEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED AWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQS hide sequence

RefSeq Acc Id:	NP_001041664 ⟸ NM_001048199
- Peptide Label:	isoform c
- UniProtKB:	Q16269 (UniProtKB/Swiss-Prot), Q6NT97 (UniProtKB/Swiss-Prot), P18754 (UniProtKB/Swiss-Prot), Q5T081 (UniProtKB/TrEMBL), A0A0S2Z3J1 (UniProtKB/TrEMBL), C9JW69 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS IPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGD SHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGD LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS HEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR AEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED AWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQS hide sequence

RefSeq Acc Id:	NP_001368794 ⟸ NM_001381865
- Peptide Label:	isoform c
- UniProtKB:	Q16269 (UniProtKB/Swiss-Prot), P18754 (UniProtKB/Swiss-Prot), Q6NT97 (UniProtKB/Swiss-Prot), A0A0S2Z3J1 (UniProtKB/TrEMBL), Q5T081 (UniProtKB/TrEMBL), C9JW69 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001368795 ⟸ NM_001381866
- Peptide Label:	isoform c
- UniProtKB:	Q16269 (UniProtKB/Swiss-Prot), P18754 (UniProtKB/Swiss-Prot), Q6NT97 (UniProtKB/Swiss-Prot), A0A0S2Z3J1 (UniProtKB/TrEMBL), Q5T081 (UniProtKB/TrEMBL), C9JW69 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSP00000381931 ⟸ ENST00000398958

Ensembl Acc Id:

ENSP00000497402 ⟸ ENST00000649185

Ensembl Acc Id:

ENSP00000413644 ⟸ ENST00000411533

Ensembl Acc Id:

ENSP00000362937 ⟸ ENST00000373831

Ensembl Acc Id:

ENSP00000362939 ⟸ ENST00000373833

Ensembl Acc Id:

ENSP00000362938 ⟸ ENST00000373832

Ensembl Acc Id:

ENSP00000402740 ⟸ ENST00000427469

Ensembl Acc Id:

ENSP00000402260 ⟸ ENST00000419074

Ensembl Acc Id:

ENSP00000394650 ⟸ ENST00000430407

Ensembl Acc Id:

ENSP00000472057 ⟸ ENST00000486790

Ensembl Acc Id:

ENSP00000405258 ⟸ ENST00000434290

Ensembl Acc Id:

ENSP00000508074 ⟸ ENST00000683442

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P18754-F1-model_v2	AlphaFold	P18754	1-421	view protein structure

Promoters

RGD ID:

6854730

Promoter ID:

EPDNEW_H530

Type:

initiation region

Name:

RCC1_1

Description:

regulator of chromosome condensation 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H531 EPDNEW_H532

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,506,044 - 28,506,104	EPDNEW

RGD ID:

6854732

Promoter ID:

EPDNEW_H531

Type:

initiation region

Name:

RCC1_3

Description:

regulator of chromosome condensation 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H530 EPDNEW_H532

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,507,367 - 28,507,427	EPDNEW

RGD ID:

6854734

Promoter ID:

EPDNEW_H532

Type:

initiation region

Name:

RCC1_2

Description:

regulator of chromosome condensation 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H530 EPDNEW_H531

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	28,518,252 - 28,518,312	EPDNEW

RGD ID:

6787138

Promoter ID:

HG_KWN:1638

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

OTTHUMT00000010325, UC001BQD.2

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	1	28,707,621 - 28,709,907 (+)	MPROMDB

RGD ID:

6785365

Promoter ID:

HG_KWN:1640

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

ENST00000373832, NM_001048194, NM_001048195, OTTHUMT00000010326, OTTHUMT00000010328, OTTHUMT00000346590

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	1	28,716,691 - 28,717,552 (+)	MPROMDB

RGD ID:

6786402

Promoter ID:

HG_KWN:1642

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

HeLa_S3, Lymphoblastoid

Transcripts:

OTTHUMT00000010329

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	1	28,730,946 - 28,731,446 (+)	MPROMDB

RGD ID:

6786403

Promoter ID:

HG_KWN:1643

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

HeLa_S3

Transcripts:

OTTHUMT00000092194

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	1	28,734,221 - 28,735,022 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:1913	AgrOrtholog
COSMIC	RCC1	COSMIC
Ensembl Genes	ENSG00000180198	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000373831	ENTREZGENE
	ENST00000373831.7	UniProtKB/Swiss-Prot
	ENST00000373832	ENTREZGENE
	ENST00000373832.5	UniProtKB/Swiss-Prot
	ENST00000373833	ENTREZGENE
	ENST00000373833.10	UniProtKB/Swiss-Prot
	ENST00000398958	ENTREZGENE
	ENST00000398958.6	UniProtKB/Swiss-Prot
	ENST00000411533	ENTREZGENE
	ENST00000411533.5	UniProtKB/TrEMBL
	ENST00000419074.5	UniProtKB/TrEMBL
	ENST00000427469.5	UniProtKB/TrEMBL
	ENST00000430407.1	UniProtKB/TrEMBL
	ENST00000434290.6	UniProtKB/TrEMBL
	ENST00000486790.2	UniProtKB/TrEMBL
	ENST00000649185.1	UniProtKB/Swiss-Prot
	ENST00000683442	ENTREZGENE
	ENST00000683442.1	UniProtKB/Swiss-Prot
Gene3D-CATH	2.130.10.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx	ENSG00000180198	GTEx
HGNC ID	HGNC:1913	ENTREZGENE
Human Proteome Map	RCC1	Human Proteome Map
InterPro	Ran_GTPase-activating	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RCC1/BLIP-II	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Reg_chr_condens	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:1104	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	1104	ENTREZGENE
OMIM	179710	OMIM
PANTHER	REGULATOR OF CHROMOSOME CONDENSATION	UniProtKB/Swiss-Prot
	REGULATOR OF CHROMOSOME CONDENSATION	UniProtKB/Swiss-Prot
	REGULATOR OF CHROMOSOME CONDENSATION	UniProtKB/TrEMBL
	REGULATOR OF CHROMOSOME CONDENSATION	UniProtKB/TrEMBL
Pfam	RCC1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RCC1_2	UniProtKB/TrEMBL
PharmGKB	PA26449	PharmGKB, RGD
PRINTS	RCCNDNSATION	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	RCC1_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RCC1_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RCC1_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF50985	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0S2Z3I4	ENTREZGENE, UniProtKB/TrEMBL
	A0A0S2Z3J1	ENTREZGENE
	A0A0S2Z404	ENTREZGENE, UniProtKB/TrEMBL
	C9J3R0_HUMAN	UniProtKB/TrEMBL
	C9JMJ4_HUMAN	UniProtKB/TrEMBL
	C9JQZ4_HUMAN	UniProtKB/TrEMBL
	C9JRH2_HUMAN	UniProtKB/TrEMBL
	C9JW69	ENTREZGENE, UniProtKB/TrEMBL
	M0R1Q8_HUMAN	UniProtKB/TrEMBL
	P18754	ENTREZGENE
	Q16269	ENTREZGENE
	Q5T081	ENTREZGENE, UniProtKB/TrEMBL
	Q6NT97	ENTREZGENE
	RCC1_HUMAN	UniProtKB/Swiss-Prot
UniProt Secondary	A0A0S2Z3J1	UniProtKB/TrEMBL
	Q16269	UniProtKB/Swiss-Prot
	Q6NT97	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-16	RCC1	regulator of chromosome condensation 1	SNHG3-RCC1	SNHG3-RCC1 readthrough transcript	Data merged from RGD:1642405	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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