ETHE1 (ETHE1 persulfide dioxygenase) - Rat Genome Database

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Gene: ETHE1 (ETHE1 persulfide dioxygenase) Homo sapiens
Analyze
Symbol: ETHE1
Name: ETHE1 persulfide dioxygenase
RGD ID: 1322274
HGNC Page HGNC:23287
Description: Enables identical protein binding activity; iron ion binding activity; and sulfur dioxygenase activity. Involved in glutathione metabolic process and hydrogen sulfide metabolic process. Located in mitochondrion and nucleoplasm. Implicated in ethylmalonic encephalopathy.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: ETHE1, persulfide dioxygenase; ethylmalonic encephalopathy 1; ethylmalonic encephalopathy protein 1; hepatoma subtracted clone one protein; HSCO; persulfide dioxygenase ETHE1, mitochondrial; protein ETHE1, mitochondrial; sulfur dioxygenase ETHE1; YF13H12
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381943,506,719 - 43,527,201 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1943,506,719 - 43,527,230 (-)EnsemblGRCh38hg38GRCh38
GRCh371944,010,871 - 44,031,353 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361948,702,711 - 48,723,236 (-)NCBINCBI36Build 36hg18NCBI36
Build 341948,702,711 - 48,723,236NCBI
Celera1940,811,624 - 40,834,029 (-)NCBICelera
Cytogenetic Map19q13.31NCBI
HuRef1940,440,766 - 40,462,063 (-)NCBIHuRef
CHM1_11944,012,533 - 44,033,058 (-)NCBICHM1_1
T2T-CHM13v2.01946,327,106 - 46,348,785 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 49 rows
Object Symbol
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Original Reference(s)
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:28492532
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:25741868 and PMID:28492532
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:25741868
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:14732903 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:14732903 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:28492532
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:18593870 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVar 
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:28492532
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:39825153
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:19289697 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:25741868 and PMID:32111695
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:25741868 and PMID:28933811
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:14732903 and PMID:28933811
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:28933811
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:17576681 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:14732903 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:18593870 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:14732903 more ...
ETHE1Humanethylmalonic encephalopathy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ethylmalonic encephalopathyClinVarPMID:14732903 more ...
1 to 20 of 49 rows
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Original Reference(s)
ETHE1Humanethylmalonic encephalopathy  EXP 11554173CTD Direct Evidence: marker/mechanismCTD 
Object Symbol
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Original Reference(s)
ETHE1Humanethylmalonic encephalopathy  ISSEthe1 (Mus musculus)13592920OMIM:602473MouseDO 
Object Symbol
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Original Reference(s)
ETHE1Humanethylmalonic encephalopathy  IAGP 7240710 OMIM 

1 to 20 of 122 rows

  
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Original Reference(s)
ETHE1Human(1->4)-beta-D-glucan multiple interactionsISOEthe1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ETHE1 mRNACTDPMID:36331819
ETHE1Human1,2-dimethylhydrazine multiple interactionsISOEthe1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of ETHE1 mRNACTDPMID:22206623
ETHE1Human17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of ETHE1 mRNACTDPMID:22574217
ETHE1Human17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of ETHE1 mRNACTDPMID:31614463
ETHE1Human17beta-estradiol increases expressionISOEthe1 (Mus musculus)6480464Estradiol results in increased expression of ETHE1 mRNACTDPMID:39298647
ETHE1Human17beta-estradiol affects expressionISOEthe1 (Rattus norvegicus)6480464Estradiol affects the expression of ETHE1 mRNACTDPMID:32145629
ETHE1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOEthe1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of ETHE1 mRNACTDPMID:21570461
ETHE1Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOEthe1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of ETHE1 mRNACTDPMID:33387578 and PMID:34747641
ETHE1Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOEthe1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of ETHE1 mRNACTDPMID:21215274 and PMID:21724226
ETHE1Human2,4-dinitrotoluene affects expressionISOEthe1 (Rattus norvegicus)64804642 and 4-dinitrotoluene affects the expression of ETHE1 mRNACTDPMID:21346803
ETHE1Human2,6-dimethoxyphenol multiple interactionsEXP 6480464[pyrogallol 1 more ...CTDPMID:38598786
ETHE1Human2-palmitoylglycerol increases expressionEXP 64804642-palmitoylglycerol results in increased expression of ETHE1 mRNACTDPMID:37199045
ETHE1Human3,3',5-triiodo-L-thyronine increases expressionISOEthe1 (Rattus norvegicus)6480464Triiodothyronine results in increased expression of ETHE1 mRNACTDPMID:28299817
ETHE1Human3-chloropropane-1,2-diol increases expressionISOEthe1 (Rattus norvegicus)6480464alpha-Chlorohydrin results in increased expression of ETHE1 mRNACTDPMID:28522335
ETHE1Human4,4'-sulfonyldiphenol multiple interactionsISOEthe1 (Mus musculus)6480464[bisphenol S co-treated with Tretinoin] results in decreased expression of ETHE1 mRNACTDPMID:30951980
ETHE1Human4,4'-sulfonyldiphenol increases expressionISOEthe1 (Mus musculus)6480464bisphenol S results in increased expression of ETHE1 mRNACTDPMID:39298647
ETHE1Human4,4'-sulfonyldiphenol increases methylationISOEthe1 (Mus musculus)6480464bisphenol S results in increased methylation of ETHE1 exonCTDPMID:33297965
ETHE1Human4-hydroxyphenyl retinamide increases expressionISOEthe1 (Mus musculus)6480464Fenretinide results in increased expression of ETHE1 mRNACTDPMID:28973697
ETHE1Humanacrylamide increases expressionISOEthe1 (Rattus norvegicus)6480464Acrylamide results in increased expression of ETHE1 mRNACTDPMID:28959563
ETHE1Humanactinomycin D multiple interactionsEXP 6480464[Dactinomycin co-treated with nutlin 3] results in increased secretion of ETHE1 proteinCTDPMID:38460933

1 to 20 of 122 rows

Biological Process

  
Object Symbol
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Original Reference(s)
ETHE1Humanglutathione metabolic process involved_inIDA 150520179 PMID:23144459UniProtPMID:23144459
ETHE1Humanglutathione metabolic process involved_inIBAPANTHER:PTN002454072 and UniProtKB:O95571150520179 GO_CentralGO_REF:0000033
ETHE1Humanglutathione metabolic process involved_inIEAInterPro:IPR044528150520179 InterProGO_REF:0000002
ETHE1Humanhydrogen sulfide metabolic process involved_inIDA 150520179 PMID:23144459UniProtPMID:23144459
ETHE1Humanhydrogen sulfide metabolic process involved_inIBAPANTHER:PTN002454072 and UniProtKB:O95571150520179 GO_CentralGO_REF:0000033

Cellular Component
1 to 12 of 12 rows

  
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Original Reference(s)
ETHE1Humancytoplasm located_inIDA 150520179 LIFEdbGO_REF:0000054
ETHE1Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
ETHE1Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
ETHE1Humanmitochondrial matrix located_inIEAUniProtKB-SubCell:SL-0170150520179 UniProtGO_REF:0000044
ETHE1Humanmitochondrial matrix located_inTAS 150520179 ReactomeReactome:R-HSA-1614605
ETHE1Humanmitochondrion located_inHTP 150520179 PMID:34800366FlyBasePMID:34800366
ETHE1Humanmitochondrion is_active_inIBAPANTHER:PTN000940093 more ...150520179 GO_CentralGO_REF:0000033
ETHE1Humanmitochondrion located_inIEAUniProtKB-KW:KW-0496150520179 UniProtGO_REF:0000043
ETHE1Humanmitochondrion located_inIDA 150520179 HPAGO_REF:0000052
ETHE1Humannucleoplasm located_inIDA 150520179 HPAGO_REF:0000052
ETHE1Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
ETHE1Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
1 to 12 of 12 rows

Molecular Function
1 to 11 of 11 rows

  
1 to 11 of 11 rows

1 to 20 of 42 rows
Object Symbol
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Term
Qualifier
Evidence
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Reference
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Source
Original Reference(s)
ETHE1HumanAbnormal basal ganglia MRI signal intensity  IAGP 8699517 HPOORPHA:51188
ETHE1HumanAbnormal brainstem MRI signal intensity  IAGP 8699517 HPOORPHA:51188
ETHE1HumanAbnormal pyramidal sign  IAGP 8699517 HPOORPHA:51188
ETHE1HumanAbnormal retinal vascular morphology  IAGP 8699517 HPOMIM:602473
ETHE1HumanAbnormality of extrapyramidal motor function  IAGP 8699517 HPOORPHA:51188
ETHE1HumanAbnormality of extrapyramidal motor function  IAGP 8699517 HPOMIM:602473
ETHE1HumanAcrocyanosis  IAGP 8699517 HPOORPHA:51188
ETHE1HumanAcrocyanosis  IAGP 8699517 HPOMIM:602473
ETHE1HumanAtaxia  IAGP 8699517 HPOORPHA:51188
ETHE1HumanAtaxia  IAGP 8699517 HPOMIM:602473
ETHE1HumanAutosomal recessive inheritance  IAGP 8699517 HPOMIM:602473
ETHE1HumanBabinski sign  IAGP 8699517 HPOMIM:602473
ETHE1HumanChronic diarrhea  IAGP 8699517 HPOMIM:602473
ETHE1HumanCytochrome C oxidase-negative muscle fibers  IAGP 8699517 HPOMIM:602473
ETHE1HumanDeath in infancy  IAGP 8699517 HPOMIM:602473
ETHE1HumanDevelopmental regression  IAGP 8699517 HPOORPHA:51188
ETHE1HumanDevelopmental regression  IAGP 8699517 HPOMIM:602473
ETHE1HumanDiarrhea  IAGP 8699517 HPOORPHA:51188
ETHE1HumanElevated circulating butyrylcarnitine concentration  IAGP 8699517 HPOMIM:602473
ETHE1HumanElevated circulating thiosulfate concentration  IAGP 8699517 HPOMIM:602473
1 to 20 of 42 rows
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Original Reference(s)
ETHE1HumanAbnormality of the nervous system  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Abnormality of the nervous systemClinVarPMID:16183799 more ...
ETHE1HumanSchizophrenia  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106 and PMID:30208311

#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
PMID:11076863   PMID:11256614   PMID:12398897   PMID:12477932   PMID:14732903   PMID:15057824   PMID:15342556   PMID:15489334   PMID:15489336   PMID:16169070   PMID:16183799   PMID:16381901  
PMID:16929096   PMID:17353187   PMID:18029348   PMID:18187620   PMID:18593870   PMID:19136963   PMID:20877624   PMID:20978941   PMID:21832049   PMID:21873635   PMID:23144459   PMID:23874603  
PMID:24344204   PMID:25198162   PMID:26186194   PMID:26344197   PMID:26760575   PMID:26871637   PMID:27074420   PMID:27742479   PMID:28514442   PMID:28933811   PMID:29791485   PMID:30391543  
PMID:31108370   PMID:31477743   PMID:31536960   PMID:32296183   PMID:33274826   PMID:33639274   PMID:33961781   PMID:34800366   PMID:35032548   PMID:35575683   PMID:35944360   PMID:36215168  
PMID:36225252   PMID:36604567   PMID:37223481   PMID:37528093  



ETHE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381943,506,719 - 43,527,201 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1943,506,719 - 43,527,230 (-)EnsemblGRCh38hg38GRCh38
GRCh371944,010,871 - 44,031,353 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361948,702,711 - 48,723,236 (-)NCBINCBI36Build 36hg18NCBI36
Build 341948,702,711 - 48,723,236NCBI
Celera1940,811,624 - 40,834,029 (-)NCBICelera
Cytogenetic Map19q13.31NCBI
HuRef1940,440,766 - 40,462,063 (-)NCBIHuRef
CHM1_11944,012,533 - 44,033,058 (-)NCBICHM1_1
T2T-CHM13v2.01946,327,106 - 46,348,785 (-)NCBIT2T-CHM13v2.0
Ethe1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39724,286,968 - 24,308,350 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl724,286,968 - 24,308,350 (+)EnsemblGRCm39 Ensembl
GRCm38724,587,543 - 24,608,925 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl724,587,543 - 24,608,925 (+)EnsemblGRCm38mm10GRCm38
MGSCv37725,372,562 - 25,393,944 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36724,296,303 - 24,317,685 (+)NCBIMGSCv36mm8
Celera719,201,450 - 19,222,832 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map711.66NCBI
Ethe1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8189,311,948 - 89,327,000 (+)NCBIGRCr8
mRatBN7.2180,184,037 - 80,199,092 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl180,183,894 - 80,199,052 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx185,576,393 - 85,591,434 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0194,127,481 - 94,142,531 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0187,332,138 - 87,347,179 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0181,457,008 - 81,472,061 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl181,456,984 - 81,472,097 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0182,716,410 - 82,731,463 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4179,875,629 - 79,890,681 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1179,953,739 - 79,968,786 (+)NCBI
Celera174,636,910 - 74,651,962 (+)NCBICelera
Cytogenetic Map1q21NCBI
Ethe1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555551,262,802 - 1,279,714 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555551,262,860 - 1,279,714 (-)NCBIChiLan1.0ChiLan1.0
ETHE1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22049,664,616 - 49,686,290 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11951,533,548 - 51,555,217 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01940,447,367 - 40,469,037 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
ETHE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11111,583,690 - 111,607,420 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1111,471,522 - 111,607,386 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1111,063,414 - 111,087,138 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01112,193,836 - 112,217,585 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1112,081,868 - 112,217,551 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11111,782,087 - 111,805,730 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01111,415,757 - 111,439,468 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01112,300,036 - 112,323,637 (+)NCBIUU_Cfam_GSD_1.0
Ethe1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934916,378,763 - 16,403,464 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936706726,089 - 746,760 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936706726,106 - 750,733 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ETHE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl650,375,841 - 50,396,237 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1650,375,836 - 50,395,769 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2646,148,306 - 46,150,857 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ETHE1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1637,024,015 - 37,045,628 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl637,024,014 - 37,045,737 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607316,563,865 - 16,584,962 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ethe1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249071,057,768 - 1,073,003 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249071,057,768 - 1,080,936 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in ETHE1
400 total Variants

1 to 10 of 467 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_014297.5(ETHE1):c.427G>A (p.Val143Ile) single nucleotide variant Ethylmalonic encephalopathy [RCV000551325] Chr19:43511515 [GRCh38]
Chr19:44015667 [GRCh37]
Chr19:19q13.31
uncertain significance
ETHE1, 1-BP INS, 604G insertion Ethylmalonic encephalopathy [RCV000002409] Chr19:19q13.32 pathogenic
ETHE1, 1-BP INS, 221A insertion Ethylmalonic encephalopathy [RCV000002410] Chr19:19q13.32 pathogenic
ETHE1, 11-BP DEL, NT440 deletion Ethylmalonic encephalopathy [RCV000002411] Chr19:19q13.32 pathogenic
ETHE1, IVS4DS, G-T, +1 single nucleotide variant Ethylmalonic encephalopathy [RCV000002412] Chr19:19q13.32 pathogenic
ETHE1, EX4DEL deletion Ethylmalonic encephalopathy [RCV000002413] Chr19:19q13.32 pathogenic
NM_014297.5(ETHE1):c.487C>T (p.Arg163Trp) single nucleotide variant Ethylmalonic encephalopathy [RCV000002407]|not provided [RCV004721241] Chr19:43511455 [GRCh38]
Chr19:44015607 [GRCh37]
Chr19:19q13.31
pathogenic
NM_014297.5(ETHE1):c.3G>T (p.Met1Ile) single nucleotide variant Ethylmalonic encephalopathy [RCV000002408]|not provided [RCV000197782] Chr19:43527175 [GRCh38]
Chr19:44031327 [GRCh37]
Chr19:19q13.31
pathogenic|likely pathogenic
NM_014297.5(ETHE1):c.554T>G (p.Leu185Arg) single nucleotide variant Ethylmalonic encephalopathy [RCV000023703] Chr19:43508816 [GRCh38]
Chr19:44012968 [GRCh37]
Chr19:19q13.31
pathogenic
GRCh38/hg38 19q13.31(chr19:43303334-43576458)x3 copy number gain See cases [RCV000054150] Chr19:43303334..43576458 [GRCh38]
Chr19:43807486..44080610 [GRCh37]
Chr19:48499326..48772450 [NCBI36]
Chr19:19q13.31
uncertain significance
1 to 10 of 467 rows

Predicted Target Of
Summary Value
Count of predictions:1832
Count of miRNA genes:671
Interacting mature miRNAs:775
Transcripts:ENST00000292147, ENST00000594342, ENST00000595115, ENST00000598330, ENST00000600651, ENST00000602138
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1559110SCL22_HSerum cholesterol level QTL 22 (human)3.590.000241Lipid levelLDL cholesterol193190759457907594Human
597282115GWAS1378189_HLy6/PLAUR domain-containing protein 3 measurement QTL GWAS1378189 (human)5e-08Ly6/PLAUR domain-containing protein 3 measurement194352291543522916Human
1331657COPD9_HChronic obstructive pulmonary disease QTL 9 (human)1.94Chronic airflow obstructionpost-bronchodilator FEV1193102176057021760Human

D19S537  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710113,016,891 - 113,018,179UniSTSGRCh37
GRCh371944,031,850 - 44,032,011UniSTSGRCh37
Celera1940,834,483 - 40,834,646UniSTS
Cytogenetic Map19q13.31UniSTS
HuRef1940,462,515 - 40,462,678UniSTS
Marshfield Genetic Map1966.07RGD
ETHE1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371944,012,137 - 44,012,959UniSTSGRCh37
Celera1940,812,890 - 40,813,714UniSTS
HuRef1940,441,721 - 40,442,548UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 20 of 20 rows
RefSeq Transcripts NG_008141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001320869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005258687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC018758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI879202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG706505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP252912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D83198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 20 of 20 rows

Ensembl Acc Id: ENST00000292147   ⟹   ENSP00000292147
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1943,506,719 - 43,527,201 (-)Ensembl
Ensembl Acc Id: ENST00000594342   ⟹   ENSP00000469652
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1943,506,792 - 43,527,205 (-)Ensembl
Ensembl Acc Id: ENST00000595115
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1943,526,201 - 43,527,230 (-)Ensembl
Ensembl Acc Id: ENST00000598330   ⟹   ENSP00000469219
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1943,507,637 - 43,527,222 (-)Ensembl
Ensembl Acc Id: ENST00000600651   ⟹   ENSP00000469037
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1943,507,628 - 43,527,201 (-)Ensembl
Ensembl Acc Id: ENST00000602138   ⟹   ENSP00000468964
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1943,511,469 - 43,527,192 (-)Ensembl
RefSeq Acc Id: NM_001320867   ⟹   NP_001307796
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381943,506,719 - 43,527,201 (-)NCBI
CHM1_11944,012,533 - 44,033,070 (-)NCBI
T2T-CHM13v2.01946,327,106 - 46,348,731 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001320868   ⟹   NP_001307797
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381943,506,719 - 43,527,201 (-)NCBI
CHM1_11944,012,533 - 44,033,070 (-)NCBI
T2T-CHM13v2.01946,327,106 - 46,348,731 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001320869   ⟹   NP_001307798
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381943,506,719 - 43,527,201 (-)NCBI
CHM1_11944,012,533 - 44,033,070 (-)NCBI
T2T-CHM13v2.01946,327,106 - 46,348,731 (-)NCBI
Sequence:
RefSeq Acc Id: NM_014297   ⟹   NP_055112
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381943,506,719 - 43,527,201 (-)NCBI
GRCh371944,010,871 - 44,031,408 (-)NCBI
Build 361948,702,711 - 48,723,236 (-)NCBI Archive
Celera1940,811,624 - 40,834,029 (-)RGD
HuRef1940,440,766 - 40,462,063 (-)RGD
CHM1_11944,012,533 - 44,033,070 (-)NCBI
T2T-CHM13v2.01946,327,106 - 46,348,731 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005258687   ⟹   XP_005258744
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381943,506,719 - 43,527,201 (-)NCBI
GRCh371944,010,871 - 44,031,408 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054320398   ⟹   XP_054176373
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01946,327,106 - 46,348,785 (-)NCBI
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_055112   ⟸   NM_014297
- Peptide Label: isoform 1
- UniProtKB: Q96HR0 (UniProtKB/Swiss-Prot),   Q9H001 (UniProtKB/Swiss-Prot),   O95571 (UniProtKB/Swiss-Prot),   A0A0S2Z5B3 (UniProtKB/TrEMBL),   M0QXB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005258744   ⟸   XM_005258687
- Peptide Label: isoform X1
- UniProtKB: B2RCZ7 (UniProtKB/TrEMBL),   M0QXB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307798   ⟸   NM_001320869
- Peptide Label: isoform 4
- UniProtKB: A0A0S2Z5N8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001307797   ⟸   NM_001320868
- Peptide Label: isoform 3
- UniProtKB: O95571 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001307796   ⟸   NM_001320867
- Peptide Label: isoform 2
- UniProtKB: A0A0S2Z580 (UniProtKB/TrEMBL),   M0QXB5 (UniProtKB/TrEMBL)
- Sequence:
Metallo-beta-lactamase

Name Modeler Protein Id AA Range Protein Structure
AF-O95571-F1-model_v2 AlphaFold O95571 1-254 view protein structure

RGD ID:7240229
Promoter ID:EPDNEW_H25861
Type:initiation region
Name:ETHE1_1
Description:ETHE1, persulfide dioxygenase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381943,527,198 - 43,527,258EPDNEW
RGD ID:6795536
Promoter ID:HG_KWN:30150
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_014297,   UC010EIU.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361948,722,909 - 48,723,409 (-)MPROMDB


1 to 34 of 34 rows
Database
Acc Id
Source(s)
COSMIC ETHE1 COSMIC
Ensembl Genes ENSG00000105755 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000292147 ENTREZGENE
  ENST00000292147.7 UniProtKB/Swiss-Prot
Gene3D-CATH 3.60.15.10 UniProtKB/Swiss-Prot
GTEx ENSG00000105755 GTEx
HGNC ID HGNC:23287 ENTREZGENE
Human Proteome Map ETHE1 Human Proteome Map
InterPro Metallo-B-lactamas UniProtKB/Swiss-Prot
  Mito_Persulfide_Diox UniProtKB/Swiss-Prot
  POD-like_MBL-fold UniProtKB/Swiss-Prot
  RibonucZ/Hydroxyglut_hydro UniProtKB/Swiss-Prot
KEGG Report hsa:23474 UniProtKB/Swiss-Prot
NCBI Gene 23474 ENTREZGENE
OMIM 608451 OMIM
PANTHER PERSULFIDE DIOXYGENASE ETHE1 UniProtKB/Swiss-Prot
  PERSULFIDE DIOXYGENASE ETHE1, MITOCHONDRIAL UniProtKB/Swiss-Prot
Pfam Lactamase_B UniProtKB/Swiss-Prot
PharmGKB PA134879650 PharmGKB
SMART Lactamase_B UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56281 UniProtKB/Swiss-Prot
UniProt A0A0S2Z580 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z5B3 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z5N8 ENTREZGENE, UniProtKB/TrEMBL
  B2RCZ7 ENTREZGENE, UniProtKB/TrEMBL
  ETHE1_HUMAN UniProtKB/Swiss-Prot
  M0QX80_HUMAN UniProtKB/TrEMBL
  M0QXB5 ENTREZGENE, UniProtKB/TrEMBL
  M0QY80_HUMAN UniProtKB/TrEMBL
  O95571 ENTREZGENE
  Q96HR0 ENTREZGENE
  Q9H001 ENTREZGENE
UniProt Secondary Q96HR0 UniProtKB/Swiss-Prot
  Q9H001 UniProtKB/Swiss-Prot
1 to 34 of 34 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-01-29 ETHE1  ETHE1 persulfide dioxygenase  ETHE1  ETHE1, persulfide dioxygenase  Symbol and/or name change 5135510 APPROVED
2016-05-03 ETHE1  ETHE1, persulfide dioxygenase  ETHE1  ethylmalonic encephalopathy 1  Symbol and/or name change 5135510 APPROVED