DIAPH1 (diaphanous related formin 1) - Rat Genome Database

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Gene: DIAPH1 (diaphanous related formin 1) Homo sapiens
Analyze
Symbol: DIAPH1
Name: diaphanous related formin 1
RGD ID: 1321771
HGNC Page HGNC:2876
Description: Enables transmembrane transporter binding activity. Involved in several processes, including cellular response to histamine; protein localization to microtubule; and regulation of release of sequestered calcium ion into cytosol. Located in mitotic spindle. Implicated in autosomal dominant nonsyndromic deafness 1 and sensorineural hearing loss.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DFNA1; DIA1; diaphanous homolog 1; diaphanous-related formin 1; diaphanous-related formin-1; DRF1; FLJ25265; hDIA1; LFHL1; mammalian diaphanous related formin 1; mDia1; SCBMS
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385141,515,021 - 141,619,000 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5141,515,016 - 141,619,055 (-)EnsemblGRCh38hg38GRCh38
GRCh375140,894,588 - 140,998,567 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,874,772 - 140,978,747 (-)NCBINCBI36Build 36hg18NCBI36
Build 345140,874,772 - 140,978,691NCBI
Celera5136,971,324 - 137,075,350 (-)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5136,039,428 - 136,143,262 (-)NCBIHuRef
CHM1_15140,327,865 - 140,431,904 (-)NCBICHM1_1
T2T-CHM13v2.05142,041,005 - 142,145,005 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
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Original Reference(s)
DIAPH1Humansensorineural hearing loss susceptibilityIAGP 1601058autosomal dominant nonsyndromic sensorineural deafness 1 more ...RGD 
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Original Reference(s)
DIAPH1Humanautosomal dominant intellectual developmental disorder 31  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: NEURODEVELOPMENTAL DISORDER WITH NEONATAL RESPIRATORY INSUFFICIENCY more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Deafness and autosomal dominant 1ClinVarPMID:25741868 more ...
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: DEAFNESS more ...ClinVarPMID:17576681 more ...
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:25741868
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: DEAFNESS more ...ClinVarPMID:16199547 more ...
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVar 
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Deafness and autosomal dominant 1ClinVarPMID:24033266 more ...
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:24033266 more ...
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:17576681 more ...
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: KONIGSMARK SYNDROMEClinVarPMID:25741868 more ...
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Original Reference(s)
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  EXP 11554173CTD Direct Evidence: marker/mechanismCTD 
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Original Reference(s)
DIAPH1Humanautosomal dominant nonsyndromic deafness 1  IAGP 7240710 OMIM 
DIAPH1HumanSeizures, Cortical Blindness, and Microcephaly Syndrome  IAGP 7240710 OMIM 

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Original Reference(s)
DIAPH1Human1,2-dimethylhydrazine multiple interactionsISODiaph1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of DIAPH1 mRNACTDPMID:22206623
DIAPH1Human1-chloro-2,4-dinitrobenzene affects bindingEXP 6480464Dinitrochlorobenzene binds to DIAPH1 proteinCTDPMID:32991956
DIAPH1Human17beta-estradiol decreases expressionISODiaph1 (Rattus norvegicus)6480464Estradiol results in decreased expression of DIAPH1 mRNACTDPMID:32145629
DIAPH1Human17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of DIAPH1 mRNACTDPMID:31614463
DIAPH1Human17beta-estradiol increases expressionISODiaph1 (Mus musculus)6480464Estradiol results in increased expression of DIAPH1 mRNACTDPMID:39298647
DIAPH1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISODiaph1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of DIAPH1 mRNACTDPMID:21570461
DIAPH1Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISODiaph1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of DIAPH1 mRNACTDPMID:33387578
DIAPH1Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISODiaph1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of DIAPH1 mRNACTDPMID:34747641
DIAPH1Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISODiaph1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of DIAP1 mRNACTDPMID:26290441
DIAPH1Human2,4,6-tribromophenol decreases expressionEXP 64804642 more ...CTDPMID:31675489
DIAPH1Human2,4-dinitrotoluene affects expressionISODiaph1 (Rattus norvegicus)64804642 and 4-dinitrotoluene affects the expression of DIAPH1 mRNACTDPMID:21346803
DIAPH1Human2,6-dinitrotoluene affects expressionISODiaph1 (Rattus norvegicus)64804642 and 6-dinitrotoluene affects the expression of DIAPH1 mRNACTDPMID:21346803
DIAPH1Human2-palmitoylglycerol increases expressionEXP 64804642-palmitoylglycerol results in increased expression of DIAPH1 mRNACTDPMID:37199045
DIAPH1Human3-chloropropane-1,2-diol increases expressionISODiaph1 (Rattus norvegicus)6480464alpha-Chlorohydrin results in increased expression of DIAPH1 proteinCTDPMID:34915118
DIAPH1Human3-isobutyl-1-methyl-7H-xanthine multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of DIAPH1 mRNACTDPMID:28628672
DIAPH1Human3-methylcholanthrene multiple interactionsEXP 6480464Methylcholanthrene promotes the reaction [AHR protein binds to DIAPH1 promoter]CTDPMID:20348232
DIAPH1Human4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of DIAPH1 mRNACTDPMID:28628672
DIAPH1Human4,4'-sulfonyldiphenol increases expressionISODiaph1 (Mus musculus)6480464bisphenol S results in increased expression of DIAPH1 mRNACTDPMID:39298647
DIAPH1Human4-vinylcyclohexene dioxide affects expressionISODiaph1 (Mus musculus)64804644-vinyl-1-cyclohexene dioxide affects the expression of DIAPH1 mRNACTDPMID:20829426
DIAPH1Human6-propyl-2-thiouracil increases expressionISODiaph1 (Rattus norvegicus)6480464Propylthiouracil results in increased expression of DIAPH1 mRNACTDPMID:22504374

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Biological Process
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Original Reference(s)
DIAPH1Humanactin cytoskeleton organization acts_upstream_of_or_withinISODiaph1 (Mus musculus)9068941 PMID:9214622MGIPMID:9214622
DIAPH1Humanactin cytoskeleton organization involved_inISSUniProtKB:O08808150520179 UniProtGO_REF:0000024
DIAPH1Humanactin cytoskeleton organization involved_inIEAInterPro:IPR010473150520179 InterProGO_REF:0000002
DIAPH1Humanactin filament polymerization involved_inISSUniProtKB:O08808150520179 UniProtGO_REF:0000024
DIAPH1Humanactin filament polymerization acts_upstream_of_or_withinISODiaph1 (Mus musculus)9068941 PMID:14992721MGIPMID:14992721
DIAPH1Humanactin filament polymerization involved_inIBAMGI:1194490 more ...150520179 GO_CentralGO_REF:0000033
DIAPH1Humanactin nucleation acts_upstream_of_or_withinISODiaph1 (Mus musculus)9068941 PMID:21278336MGIPMID:21278336
DIAPH1Humanaxon midline choice point recognition acts_upstream_of_or_withinISOMGI:18585009068941 PMID:23890216MGIPMID:23890216
DIAPH1Humanbrain development involved_inISODiaph1 (Mus musculus)9068941 PMID:24781755UniProtPMID:24781755
DIAPH1Humancellular response to histamine involved_inIMP 150520179 PMID:15123714BHF-UCLPMID:15123714
DIAPH1Humancytoskeleton organization involved_inISSUniProtKB:O08808150520179 UniProtGO_REF:0000024
DIAPH1Humancytoskeleton organization involved_inIMP 150520179 PMID:21834987UniProtPMID:21834987
DIAPH1Humanephrin receptor signaling pathway acts_upstream_of_or_withinISOMGI:18585009068941 PMID:23890216MGIPMID:23890216
DIAPH1Humangene expression acts_upstream_of_or_withinISODiaph1 (Mus musculus)9068941 PMID:21278336MGIPMID:21278336
DIAPH1Humanmulticellular organismal locomotion acts_upstream_of_or_withinISOMGI:18585009068941 PMID:23890216MGIPMID:23890216
DIAPH1Humannegative regulation of neuron projection regeneration acts_upstream_of_or_withinISOMGI:18585009068941 PMID:23890216MGIPMID:23890216
DIAPH1Humanneuron projection development involved_inISODiaph1 (Mus musculus)9068941 PMID:18572016UniProtPMID:18572016
DIAPH1Humanneuron projection retraction acts_upstream_of_or_withinISOMGI:18585009068941 PMID:23890216MGIPMID:23890216
DIAPH1Humanpositive regulation of cell migration  ISODiaph1 (Rattus norvegicus)9068941 RGDPMID:16943426 and REF_RGD_ID:1601059
DIAPH1Humanprotein localization acts_upstream_of_or_withinISOMGI:18585009068941 PMID:23890216MGIPMID:23890216
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Cellular Component
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Original Reference(s)
DIAPH1Humanactin filament is_active_inIBAMGI:1927222 more ...150520179 GO_CentralGO_REF:0000033
DIAPH1Humanbrush border located_inISODiaph1 (Mus musculus)9068941 PMID:22114352UniProtPMID:22114352
DIAPH1Humancell projection located_inIEAUniProtKB-KW:KW-0966150520179 UniProtGO_REF:0000043
DIAPH1Humancentrosome located_inIEAUniProtKB-SubCell:SL-0048150520179 UniProtGO_REF:0000044
DIAPH1Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
DIAPH1Humancytoplasm located_inISSUniProtKB:O08808150520179 UniProtGO_REF:0000024
DIAPH1Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
DIAPH1Humancytoskeleton located_inIEAUniProtKB-SubCell:SL-0090150520179 UniProtGO_REF:0000044
DIAPH1Humancytoskeleton located_inIEAUniProtKB-KW:KW-0206150520179 UniProtGO_REF:0000043
DIAPH1Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-5665982 more ...
DIAPH1Humanficolin-1-rich granule membrane located_inTAS 150520179 ReactomeReactome:R-HSA-6800426
DIAPH1Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
DIAPH1Humanmicrotubule cytoskeleton located_inISODIAPH1 (Sus scrofa)9068941 PMID:15123714BHF-UCLPMID:15123714
DIAPH1Humanmitotic spindle located_inIDA 150520179 PMID:15123714BHF-UCLPMID:15123714
DIAPH1Humanneuron projection located_inISODiaph1 (Mus musculus)9068941 PMID:18572016UniProtPMID:18572016
DIAPH1Humannucleus located_inISSUniProtKB:O08808150520179 UniProtGO_REF:0000024
DIAPH1Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
DIAPH1Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
DIAPH1Humanplasma membrane located_inIEAUniProtKB-KW:KW-1003150520179 UniProtGO_REF:0000043
DIAPH1Humanplasma membrane located_inIEAUniProtKB-SubCell:SL-0039150520179 UniProtGO_REF:0000044
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Molecular Function
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Imported Annotations - KEGG (archival)

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Original Reference(s)
DIAPH1HumanShigella infection pathway  IEA 6907045 KEGGhsa:05131

Imported Annotations - PID (archival)

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Original Reference(s)
DIAPH1HumanE-cadherin signaling pathway  EXP 6484113 PIDPID:200182
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Original Reference(s)
DIAPH1HumanAbnormal cerebral vascular morphology  IAGP 8699517 HPOORPHA:2573
DIAPH1HumanAutosomal dominant inheritance  IAGP 8699517 HPOMIM:124900 and PMID:26912466
DIAPH1HumanAutosomal recessive inheritance  IAGP 8699517 HPOMIM:616632 and PMID:24781755
DIAPH1HumanB-cell lymphoma  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanBrain atrophy  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanBronchiectasis  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanBronchiectasis  IAGP 8699517 HPOMIM:616632 and PMID:26463574
DIAPH1HumanCerebral visual impairment  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanCerebral visual impairment  IAGP 8699517 HPOMIM:616632 and PMID:24781755
DIAPH1HumanChildhood onset  IAGP 8699517 HPOMIM:124900 and PMID:26912466
DIAPH1HumanCombined immunodeficiency  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanDecreased body weight  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanDecreased proportion of CD4-positive T cells  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanDelayed puberty  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanEnamel hypomineralization  IAGP 8699517 HPOORPHA:494444
DIAPH1HumanFailure to thrive in infancy  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanGlobal developmental delay  IAGP 8699517 HPOMIM:616632 and PMID:24781755
DIAPH1HumanGlobal developmental delay  IAGP 8699517 HPOORPHA:477814
DIAPH1HumanGrowth delay  IAGP 8699517 HPOMIM:616632 and PMID:24781755
DIAPH1HumanHypoplasia of the corpus callosum  IAGP 8699517 HPOMIM:616632 and PMID:24781755
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1 to 12 of 12 rows
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Original Reference(s)
DIAPH1HumanFailure to thrive  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Failure to thriveClinVarPMID:24781755 more ...
DIAPH1HumanGlobal developmental delay  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Global developmental delayClinVarPMID:24781755 more ...
DIAPH1HumanHearing impairment  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Hearing impairmentClinVarPMID:30311386
DIAPH1HumanHearing impairment  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: DeafnessClinVarPMID:25741868 and PMID:26463574
DIAPH1HumanHearing impairment  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Hearing impairmentClinVarPMID:24781755 more ...
DIAPH1HumanHearing impairment  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Hearing impairmentClinVarPMID:28492532 and PMID:30311386
DIAPH1HumanHearing impairment  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Hearing impairmentClinVarPMID:32581362
DIAPH1HumanMicrocephaly  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: MicrocephalyClinVarPMID:24781755 more ...
DIAPH1HumanMicrocephaly  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: MicrocephalyClinVarPMID:25741868 more ...
DIAPH1HumanNeonatal seizure  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neonatal seizureClinVar 
DIAPH1HumanNeonatal seizure  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neonatal seizureClinVar 
DIAPH1HumanSeizure  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: EpilepsyClinVarPMID:24781755 more ...
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#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Nonsyndromic deafness DFNA1 associated with mutation of a human homolog of the Drosophila gene diaphanous. Lynch ED, etal., Science. 1997 Nov 14;278(5341):1315-8.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
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PMID:1350680   PMID:7737110   PMID:8619474   PMID:9110174   PMID:10814512   PMID:11171383   PMID:11590143   PMID:11992112   PMID:12065429   PMID:12324464   PMID:12477932   PMID:12665801  
PMID:12773565   PMID:12847276   PMID:14592989   PMID:14702039   PMID:15085137   PMID:15096506   PMID:15123714   PMID:15231748   PMID:15864301   PMID:16055720   PMID:16109481   PMID:16344560  
PMID:16887337   PMID:17182868   PMID:17301291   PMID:17940061   PMID:18194650   PMID:18218625   PMID:18230650   PMID:18922799   PMID:18955552   PMID:19041431   PMID:19102128   PMID:19158278  
PMID:19160018   PMID:19240061   PMID:19470376   PMID:19738201   PMID:19913427   PMID:20030946   PMID:20071339   PMID:20223827   PMID:20301607   PMID:20467437   PMID:20591975   PMID:20937854  
PMID:21680709   PMID:21706016   PMID:21834987   PMID:21873635   PMID:22179776   PMID:22190034   PMID:22194616   PMID:22266902   PMID:22454521   PMID:22658674   PMID:22863883   PMID:22939629  
PMID:22944692   PMID:23325789   PMID:24105619   PMID:24126053   PMID:24317603   PMID:24403606   PMID:24550385   PMID:24639526   PMID:24781755   PMID:24891322   PMID:24950964   PMID:25281560  
PMID:25298036   PMID:25458010   PMID:25670202   PMID:25921289   PMID:26124177   PMID:26186194   PMID:26201082   PMID:26344197   PMID:26349808   PMID:26463574   PMID:26496610   PMID:26564775  
PMID:26566078   PMID:26831064   PMID:26893363   PMID:26912466   PMID:27177153   PMID:27524199   PMID:27684187   PMID:27705803   PMID:27707755   PMID:27808407   PMID:27911711   PMID:27956147  
PMID:27967251   PMID:28003573   PMID:28329679   PMID:28378594   PMID:28514442   PMID:28515276   PMID:28524877   PMID:28581483   PMID:28751768   PMID:28760985   PMID:28815995   PMID:28827448  
PMID:28982779   PMID:29035824   PMID:29117863   PMID:29239839   PMID:29467282   PMID:29490301   PMID:29507755   PMID:29509190   PMID:29568061   PMID:29669786   PMID:29966194   PMID:30021884  
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DIAPH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385141,515,021 - 141,619,000 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5141,515,016 - 141,619,055 (-)EnsemblGRCh38hg38GRCh38
GRCh375140,894,588 - 140,998,567 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,874,772 - 140,978,747 (-)NCBINCBI36Build 36hg18NCBI36
Build 345140,874,772 - 140,978,691NCBI
Celera5136,971,324 - 137,075,350 (-)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5136,039,428 - 136,143,262 (-)NCBIHuRef
CHM1_15140,327,865 - 140,431,904 (-)NCBICHM1_1
T2T-CHM13v2.05142,041,005 - 142,145,005 (-)NCBIT2T-CHM13v2.0
Diaph1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391837,976,654 - 38,068,573 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1837,976,654 - 38,068,529 (-)EnsemblGRCm39 Ensembl
GRCm381837,843,601 - 37,935,622 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1837,843,601 - 37,935,476 (-)EnsemblGRCm38mm10GRCm38
MGSCv371838,004,478 - 38,095,065 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361837,970,798 - 38,061,385 (-)NCBIMGSCv36mm8
Celera1839,188,303 - 39,278,736 (-)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1819.71NCBI
Diaph1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81829,920,889 - 30,020,280 (-)NCBIGRCr8
mRatBN7.21829,669,659 - 29,769,070 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1829,669,659 - 29,769,172 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1829,773,984 - 29,873,376 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01830,535,964 - 30,635,353 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01829,871,305 - 29,970,698 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01830,972,907 - 31,071,371 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1830,972,907 - 31,071,371 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01830,663,859 - 30,762,658 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41830,757,191 - 30,855,548 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11830,784,366 - 30,882,101 (-)NCBI
Celera1829,313,748 - 29,412,995 (-)NCBICelera
Cytogenetic Map18p11NCBI
Diaph1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541512,156,152 - 12,272,961 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541512,156,152 - 12,272,961 (+)NCBIChiLan1.0ChiLan1.0
DIAPH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24136,764,381 - 136,867,993 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15134,960,673 - 135,007,628 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05136,876,396 - 136,980,097 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15142,990,248 - 143,092,558 (-)NCBIpanpan1.1PanPan1.1panPan2
DIAPH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1236,483,781 - 36,581,390 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl236,485,571 - 36,581,320 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha233,535,791 - 33,633,355 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0236,937,687 - 37,035,539 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl236,937,690 - 37,035,611 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1234,012,555 - 34,110,155 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0234,824,079 - 34,921,683 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0235,631,288 - 35,728,900 (-)NCBIUU_Cfam_GSD_1.0
Diaph1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213150,974,209 - 151,071,265 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650412,548,452 - 12,643,399 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650412,548,452 - 12,645,236 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DIAPH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2143,158,585 - 143,271,147 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12143,158,691 - 143,271,110 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22149,363,162 - 149,473,567 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DIAPH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12344,139,495 - 44,244,505 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2344,139,360 - 44,244,490 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603433,608,326 - 33,713,597 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Diaph1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624774739,206 - 845,272 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624774738,717 - 845,187 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in DIAPH1
1515 total Variants

1 to 10 of 1731 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_005219.5(DIAPH1):c.2099T>A (p.Ile700Asn) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000546849]|not provided [RCV003480691] Chr5:141573751 [GRCh38]
Chr5:140953318 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.3003C>G (p.Ile1001Met) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000549611] Chr5:141528717 [GRCh38]
Chr5:140908284 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.1985G>A (p.Gly662Asp) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000554102]|Autosomal dominant nonsyndromic hearing loss 1 [RCV001157174]|not provided [RCV001562152]|not specified [RCV001195316] Chr5:141573865 [GRCh38]
Chr5:140953432 [GRCh37]
Chr5:5q31.3
benign|likely benign|uncertain significance
NM_005219.5(DIAPH1):c.118-9G>A single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000547762] Chr5:141588259 [GRCh38]
Chr5:140967826 [GRCh37]
Chr5:5q31.3
likely benign
NM_005219.5(DIAPH1):c.1269C>G (p.Asp423Glu) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000526185]|Progressive microcephaly-seizures-cortical blindness-developmental delay syndrome [RCV001420579] Chr5:141577486 [GRCh38]
Chr5:140957053 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.1659G>A (p.Lys553=) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000524722]|not provided [RCV001548203]|not specified [RCV001195574] Chr5:141574191 [GRCh38]
Chr5:140953758 [GRCh37]
Chr5:5q31.3
benign|likely benign
NM_005219.5(DIAPH1):c.3701C>T (p.Ala1234Val) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000548020] Chr5:141516969 [GRCh38]
Chr5:140896536 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.3574+6G>C single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV001043216]|not specified [RCV000602632] Chr5:141526032 [GRCh38]
Chr5:140905599 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.2877T>G (p.Ser959=) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000546409] Chr5:141528843 [GRCh38]
Chr5:140908410 [GRCh37]
Chr5:5q31.3
likely benign
NM_005219.5(DIAPH1):c.2158C>T (p.Leu720Phe) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000652763]|Inborn genetic diseases [RCV002525173]|not provided [RCV001722443]|not specified [RCV000519502] Chr5:141573692 [GRCh38]
Chr5:140953259 [GRCh37]
Chr5:5q31.3
likely benign|conflicting interpretations of pathogenicity|uncertain significance
1 to 10 of 1731 rows

Predicted Target Of
Summary Value
Count of predictions:11998
Count of miRNA genes:1183
Interacting mature miRNAs:1504
Transcripts:ENST00000253811, ENST00000389054, ENST00000389057, ENST00000398557, ENST00000398562, ENST00000398566, ENST00000448451, ENST00000468119, ENST00000472516, ENST00000476339, ENST00000491754, ENST00000494967, ENST00000518047, ENST00000518484, ENST00000520569, ENST00000521457, ENST00000523100, ENST00000524301
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 20 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
407018434GWAS667410_Hbody mass index QTL GWAS667410 (human)1e-08body mass indexbody mass index (BMI) (CMO:0000105)5141610541141610542Human
597142966GWAS1239040_Htriglyceride measurement QTL GWAS1239040 (human)8e-09triglyceride measurementblood triglyceride level (CMO:0000118)5141554225141554226Human
596976468GWAS1095987_Hbody height QTL GWAS1095987 (human)7e-10body height5141575387141575388Human
597226076GWAS1322150_Hself reported educational attainment QTL GWAS1322150 (human)1e-10self reported educational attainment5141566788141566789Human
597116819GWAS1212893_Hself reported educational attainment QTL GWAS1212893 (human)1e-10self reported educational attainment5141594912141594913Human
597192080GWAS1288154_Heducational attainment QTL GWAS1288154 (human)3e-24educational attainment5141610541141610542Human
597029884GWAS1125958_Hbody mass index QTL GWAS1125958 (human)3e-08body mass indexbody mass index (BMI) (CMO:0000105)5141610541141610542Human
597167507GWAS1263581_Hserum alanine aminotransferase measurement QTL GWAS1263581 (human)5e-08serum alanine aminotransferase measurementserum alanine aminotransferase activity level (CMO:0000575)5141538066141538068Human
596960671GWAS1080190_Hmetabolic syndrome QTL GWAS1080190 (human)6e-09metabolic syndrome5141541844141541845Human
597023928GWAS1120002_Hallergic disease QTL GWAS1120002 (human)6e-11allergic disease5141545795141545796Human

1 to 10 of 20 rows
RH92360  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,972,205 - 140,972,325UniSTSGRCh37
Build 365140,952,389 - 140,952,509RGDNCBI36
Celera5137,048,933 - 137,049,053RGD
Cytogenetic Map5q31UniSTS
HuRef5136,116,850 - 136,116,970UniSTS
GeneMap99-GB4 RH Map5531.52UniSTS
SHGC-79378  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,898,472 - 140,898,815UniSTSGRCh37
Build 365140,878,656 - 140,878,999RGDNCBI36
Celera5136,975,206 - 136,975,549RGD
Cytogenetic Map5q31UniSTS
HuRef5136,043,310 - 136,043,653UniSTS
PMC115182P3  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,981,641 - 140,982,196UniSTSGRCh37
Build 365140,961,825 - 140,962,380RGDNCBI36
Celera5137,058,369 - 137,058,924RGD
Cytogenetic Map5q31UniSTS
HuRef5136,126,286 - 136,126,841UniSTS
PMC115182P7  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,981,802 - 140,981,949UniSTSGRCh37
Build 365140,961,986 - 140,962,133RGDNCBI36
Celera5137,058,530 - 137,058,677RGD
Cytogenetic Map5q31UniSTS
HuRef5136,126,447 - 136,126,594UniSTS
D5S2318  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,894,684 - 140,894,885UniSTSGRCh37
Build 365140,874,868 - 140,875,069RGDNCBI36
Celera5136,971,420 - 136,971,621RGD
Cytogenetic Map5q31UniSTS
HuRef5136,039,524 - 136,039,725UniSTS
Whitehead-YAC Contig Map5 UniSTS
RH78579  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,895,649 - 140,895,802UniSTSGRCh37
Build 365140,875,833 - 140,875,986RGDNCBI36
Celera5136,972,385 - 136,972,538RGD
Cytogenetic Map5q31UniSTS
HuRef5136,040,489 - 136,040,642UniSTS
GeneMap99-GB4 RH Map5531.52UniSTS
NCBI RH Map5889.1UniSTS
RH15897  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,894,682 - 140,894,806UniSTSGRCh37
Build 365140,874,866 - 140,874,990RGDNCBI36
Celera5136,971,418 - 136,971,542RGD
Cytogenetic Map5q31UniSTS
HuRef5136,039,522 - 136,039,646UniSTS
GeneMap99-GB4 RH Map5531.52UniSTS
NCBI RH Map5889.1UniSTS
RH66450  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,988,378 - 140,988,494UniSTSGRCh37
Build 365140,968,562 - 140,968,678RGDNCBI36
Celera5137,065,106 - 137,065,222RGD
Cytogenetic Map5q31UniSTS
HuRef5136,133,023 - 136,133,139UniSTS
GeneMap99-GB4 RH Map5531.22UniSTS
NCBI RH Map5889.1UniSTS
D5S1539  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,935,502 - 140,935,752UniSTSGRCh37
Build 365140,915,686 - 140,915,936RGDNCBI36
Celera5137,012,237 - 137,012,487RGD
Cytogenetic Map5q31UniSTS
HuRef5136,080,149 - 136,080,399UniSTS
Whitehead-YAC Contig Map5 UniSTS
DIAPH1__4737  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,894,585 - 140,895,261UniSTSGRCh37
Build 365140,874,769 - 140,875,445RGDNCBI36
Celera5136,971,321 - 136,971,997RGD
HuRef5136,039,425 - 136,040,101UniSTS
WI-17153  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,937,162 - 140,937,683UniSTSGRCh37
Celera5137,013,897 - 137,014,418UniSTS
Cytogenetic Map5q31UniSTS
HuRef5136,081,809 - 136,082,330UniSTS
GeneMap99-GB4 RH Map5531.32UniSTS
Whitehead-RH Map5441.9UniSTS
NCBI RH Map5889.1UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2438 2788 2251 4973 1726 2351 5 624 1951 465 2269 7302 6469 53 3734 1 852 1743 1617 175 1


1 to 30 of 41 rows
RefSeq Transcripts NG_011594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001079812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001314007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054351936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054351937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB209482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB839039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC008781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF051782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK094264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL050086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY007129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY360322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY363395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 41 rows

Ensembl Acc Id: ENST00000253811   ⟹   ENSP00000253811
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,022 - 141,619,055 (-)Ensembl
Ensembl Acc Id: ENST00000389054   ⟹   ENSP00000373706
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,021 - 141,619,000 (-)Ensembl
Ensembl Acc Id: ENST00000389057   ⟹   ENSP00000373709
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,022 - 141,619,055 (-)Ensembl
Ensembl Acc Id: ENST00000398557   ⟹   ENSP00000381565
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,022 - 141,619,055 (-)Ensembl
Ensembl Acc Id: ENST00000448451   ⟹   ENSP00000408159
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,055 - 141,524,510 (-)Ensembl
Ensembl Acc Id: ENST00000468119   ⟹   ENSP00000493546
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,516,572 - 141,524,770 (-)Ensembl
Ensembl Acc Id: ENST00000472516
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,577,989 - 141,579,129 (-)Ensembl
Ensembl Acc Id: ENST00000476339
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,016 - 141,524,755 (-)Ensembl
Ensembl Acc Id: ENST00000491754
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,528,544 - 141,560,701 (-)Ensembl
Ensembl Acc Id: ENST00000494967
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,528,545 - 141,534,488 (-)Ensembl
Ensembl Acc Id: ENST00000518047   ⟹   ENSP00000428268
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,975 - 141,618,914 (-)Ensembl
Ensembl Acc Id: ENST00000518484
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,528,800 - 141,557,854 (-)Ensembl
Ensembl Acc Id: ENST00000523100   ⟹   ENSP00000428208
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,577,493 - 141,618,999 (-)Ensembl
Ensembl Acc Id: ENST00000524301
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,583,519 - 141,587,485 (-)Ensembl
Ensembl Acc Id: ENST00000643312   ⟹   ENSP00000495191
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,516,625 - 141,524,730 (-)Ensembl
Ensembl Acc Id: ENST00000643718
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,073 - 141,524,729 (-)Ensembl
Ensembl Acc Id: ENST00000647330   ⟹   ENSP00000494308
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,574,032 - 141,587,176 (-)Ensembl
Ensembl Acc Id: ENST00000647433   ⟹   ENSP00000494675
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,515,021 - 141,619,055 (-)Ensembl
RefSeq Acc Id: NM_001079812   ⟹   NP_001073280
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,515,021 - 141,619,000 (-)NCBI
GRCh375140,894,588 - 140,998,622 (-)ENTREZGENE
Build 365140,874,772 - 140,978,747 (-)NCBI Archive
HuRef5136,039,428 - 136,143,262 (-)ENTREZGENE
CHM1_15140,327,865 - 140,431,904 (-)NCBI
T2T-CHM13v2.05142,041,005 - 142,145,005 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001314007   ⟹   NP_001300936
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,515,021 - 141,619,000 (-)NCBI
CHM1_15140,327,865 - 140,431,904 (-)NCBI
T2T-CHM13v2.05142,041,005 - 142,145,005 (-)NCBI
Sequence:
RefSeq Acc Id: NM_005219   ⟹   NP_005210
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,515,021 - 141,619,000 (-)NCBI
GRCh375140,894,588 - 140,998,622 (-)ENTREZGENE
Build 365140,874,772 - 140,978,747 (-)NCBI Archive
HuRef5136,039,428 - 136,143,262 (-)ENTREZGENE
CHM1_15140,327,865 - 140,431,904 (-)NCBI
T2T-CHM13v2.05142,041,005 - 142,145,005 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047416884   ⟹   XP_047272840
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,515,021 - 141,588,162 (-)NCBI
RefSeq Acc Id: XM_047416885   ⟹   XP_047272841
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,515,021 - 141,618,296 (-)NCBI
RefSeq Acc Id: XM_054351936   ⟹   XP_054207911
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.05142,041,005 - 142,114,151 (-)NCBI
RefSeq Acc Id: XM_054351937   ⟹   XP_054207912
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.05142,041,005 - 142,144,301 (-)NCBI
1 to 29 of 29 rows
Protein RefSeqs NP_001073280 (Get FASTA)   NCBI Sequence Viewer  
  NP_001300936 (Get FASTA)   NCBI Sequence Viewer  
  NP_005210 (Get FASTA)   NCBI Sequence Viewer  
  XP_047272840 (Get FASTA)   NCBI Sequence Viewer  
  XP_047272841 (Get FASTA)   NCBI Sequence Viewer  
  XP_054207911 (Get FASTA)   NCBI Sequence Viewer  
  XP_054207912 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC05373 (Get FASTA)   NCBI Sequence Viewer  
  AAH07411 (Get FASTA)   NCBI Sequence Viewer  
  AAI17258 (Get FASTA)   NCBI Sequence Viewer  
  AAI43414 (Get FASTA)   NCBI Sequence Viewer  
  AAP35982 (Get FASTA)   NCBI Sequence Viewer  
  AAQ63049 (Get FASTA)   NCBI Sequence Viewer  
  AAQ64023 (Get FASTA)   NCBI Sequence Viewer  
  AAZ23039 (Get FASTA)   NCBI Sequence Viewer  
  AAZ23040 (Get FASTA)   NCBI Sequence Viewer  
  BAB14533 (Get FASTA)   NCBI Sequence Viewer  
  BAD92719 (Get FASTA)   NCBI Sequence Viewer  
  BAG62775 (Get FASTA)   NCBI Sequence Viewer  
  BAG65149 (Get FASTA)   NCBI Sequence Viewer  
  BAV60993 (Get FASTA)   NCBI Sequence Viewer  
  EAW61919 (Get FASTA)   NCBI Sequence Viewer  
  EAW61920 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000373706
  ENSP00000373706.4
  ENSP00000428268
  ENSP00000428268.2
  ENSP00000494675
GenBank Protein O60610 (Get FASTA)   NCBI Sequence Viewer  
1 to 29 of 29 rows
1 to 5 of 18 rows
1 to 5 of 18 rows
RefSeq Acc Id: NP_001073280   ⟸   NM_001079812
- Peptide Label: isoform 2
- UniProtKB: A0RZB8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_005210   ⟸   NM_005219
- Peptide Label: isoform 1
- UniProtKB: Q59FH8 (UniProtKB/Swiss-Prot),   Q17RN4 (UniProtKB/Swiss-Prot),   E9PEZ2 (UniProtKB/Swiss-Prot),   B7ZKW2 (UniProtKB/Swiss-Prot),   A6NF18 (UniProtKB/Swiss-Prot),   Q9UC76 (UniProtKB/Swiss-Prot),   O60610 (UniProtKB/Swiss-Prot),   Q6URC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001300936   ⟸   NM_001314007
- Peptide Label: isoform 3
- UniProtKB: A0A2R8Y5N1 (UniProtKB/TrEMBL),   A0A1E1ERW3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000381565   ⟸   ENST00000398557
Ensembl Acc Id: ENSP00000253811   ⟸   ENST00000253811
DAD   FH1   FH2   GBD/FH3

Name Modeler Protein Id AA Range Protein Structure
AF-O60610-F1-model_v2 AlphaFold O60610 1-1272 view protein structure

RGD ID:6802999
Promoter ID:HG_KWN:51360
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000313775,   OTTHUMT00000313779
Position:
Human AssemblyChrPosition (strand)Source
Build 365140,884,041 - 140,885,042 (-)MPROMDB
RGD ID:6803260
Promoter ID:HG_KWN:51361
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:NB4
Transcripts:UC010JFZ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 365140,885,591 - 140,886,092 (-)MPROMDB
RGD ID:6803001
Promoter ID:HG_KWN:51364
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000313778
Position:
Human AssemblyChrPosition (strand)Source
Build 365140,920,591 - 140,921,091 (-)MPROMDB
RGD ID:6803000
Promoter ID:HG_KWN:51368
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000253811,   ENST00000389054,   ENST00000398557,   ENST00000398562,   ENST00000398566,   NM_001079812,   NM_005219,   UC003LLB.2,   UC003LLC.2,   UC010JGB.1
Position:
Human AssemblyChrPosition (strand)Source
Build 365140,978,671 - 140,979,792 (-)MPROMDB


1 to 40 of 67 rows
Database
Acc Id
Source(s)
COSMIC DIAPH1 COSMIC
Ensembl Genes ENSG00000131504 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000389054 ENTREZGENE
  ENST00000389054.8 UniProtKB/Swiss-Prot
  ENST00000518047 ENTREZGENE
  ENST00000518047.5 UniProtKB/Swiss-Prot
  ENST00000647433 ENTREZGENE
Gene3D-CATH 1.10.20.40 UniProtKB/Swiss-Prot
  1.20.58.2220 UniProtKB/Swiss-Prot
  1.20.58.630 UniProtKB/Swiss-Prot
  1.25.10.10 UniProtKB/Swiss-Prot
  6.10.30.30 UniProtKB/Swiss-Prot
  Formin, FH3 diaphanous domain UniProtKB/Swiss-Prot
GTEx ENSG00000131504 GTEx
HGNC ID HGNC:2876 ENTREZGENE
Human Proteome Map DIAPH1 Human Proteome Map
InterPro ARM-like UniProtKB/Swiss-Prot
  ARM-type_fold UniProtKB/Swiss-Prot
  DAD_dom UniProtKB/Swiss-Prot
  DIA_GBD_sf UniProtKB/Swiss-Prot
  FH2_Formin UniProtKB/Swiss-Prot
  FH2_Formin_sf UniProtKB/Swiss-Prot
  FH3_dom UniProtKB/Swiss-Prot
  Formin_Homology_Diaphanous_sf UniProtKB/Swiss-Prot
  GBD/FH3_dom UniProtKB/Swiss-Prot
  GTPase-bd UniProtKB/Swiss-Prot
KEGG Report hsa:1729 UniProtKB/Swiss-Prot
NCBI Gene 1729 ENTREZGENE
OMIM 602121 OMIM
PANTHER PROTEIN DIAPHANOUS UniProtKB/Swiss-Prot
  PTHR45691:SF4 UniProtKB/Swiss-Prot
Pfam Drf_FH1 UniProtKB/Swiss-Prot
  Drf_FH3 UniProtKB/Swiss-Prot
  Drf_GBD UniProtKB/Swiss-Prot
  FH2 UniProtKB/Swiss-Prot
PharmGKB PA27333 PharmGKB
PROSITE DAD UniProtKB/Swiss-Prot
  FH2 UniProtKB/Swiss-Prot
  GBD_FH3 UniProtKB/Swiss-Prot
SMART Drf_FH3 UniProtKB/Swiss-Prot
1 to 40 of 67 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 DIAPH1  diaphanous related formin 1  DIAPH1  diaphanous-related formin 1  Symbol and/or name change 5135510 APPROVED
2013-06-04 DIAPH1  diaphanous-related formin 1  DIAPH1  diaphanous homolog 1 (Drosophila)  Symbol and/or name change 5135510 APPROVED