DIAPH1 (diaphanous related formin 1) - Rat Genome Database

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Gene: DIAPH1 (diaphanous related formin 1) Pan paniscus
Analyze
Symbol: DIAPH1
Name: diaphanous related formin 1
RGD ID: 11686387
Description: ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); actin nucleation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); autosomal dominant nonsyndromic deafness 1 (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100980841; LOC129397819; protein diaphanous homolog 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24136,764,381 - 136,867,993 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15134,960,673 - 135,007,628 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05136,876,396 - 136,980,097 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15142,990,248 - 143,092,558 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DIAPH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24136,764,381 - 136,867,993 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15134,960,673 - 135,007,628 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05136,876,396 - 136,980,097 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15142,990,248 - 143,092,558 (-)NCBIpanpan1.1PanPan1.1panPan2
DIAPH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385141,515,021 - 141,619,000 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5141,515,016 - 141,619,055 (-)EnsemblGRCh38hg38GRCh38
GRCh375140,894,588 - 140,998,567 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,874,772 - 140,978,747 (-)NCBINCBI36Build 36hg18NCBI36
Build 345140,874,772 - 140,978,691NCBI
Celera5136,971,324 - 137,075,350 (-)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5136,039,428 - 136,143,262 (-)NCBIHuRef
CHM1_15140,327,865 - 140,431,904 (-)NCBICHM1_1
T2T-CHM13v2.05142,041,005 - 142,145,005 (-)NCBIT2T-CHM13v2.0
Diaph1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391837,976,654 - 38,068,573 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1837,976,654 - 38,068,529 (-)EnsemblGRCm39 Ensembl
GRCm381837,843,601 - 37,935,622 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1837,843,601 - 37,935,476 (-)EnsemblGRCm38mm10GRCm38
MGSCv371838,004,478 - 38,095,065 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361837,970,798 - 38,061,385 (-)NCBIMGSCv36mm8
Celera1839,188,303 - 39,278,736 (-)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1819.71NCBI
Diaph1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81829,920,889 - 30,020,280 (-)NCBIGRCr8
mRatBN7.21829,669,659 - 29,769,070 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1829,669,659 - 29,769,172 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1829,773,984 - 29,873,376 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01830,535,964 - 30,635,353 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01829,871,305 - 29,970,698 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01830,972,907 - 31,071,371 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1830,972,907 - 31,071,371 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01830,663,859 - 30,762,658 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41830,757,191 - 30,855,548 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11830,784,366 - 30,882,101 (-)NCBI
Celera1829,313,748 - 29,412,995 (-)NCBICelera
Cytogenetic Map18p11NCBI
Diaph1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541512,156,152 - 12,272,961 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541512,156,152 - 12,272,961 (+)NCBIChiLan1.0ChiLan1.0
DIAPH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1236,483,781 - 36,581,390 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl236,485,571 - 36,581,320 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha233,535,791 - 33,633,355 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0236,937,687 - 37,035,539 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl236,937,690 - 37,035,611 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1234,012,555 - 34,110,155 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0234,824,079 - 34,921,683 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0235,631,288 - 35,728,900 (-)NCBIUU_Cfam_GSD_1.0
Diaph1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213150,974,209 - 151,071,265 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650412,548,452 - 12,643,399 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650412,548,452 - 12,645,236 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DIAPH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2143,158,585 - 143,271,147 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12143,158,691 - 143,271,110 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22149,363,162 - 149,473,567 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DIAPH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12344,139,495 - 44,244,505 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2344,139,360 - 44,244,490 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603433,608,326 - 33,713,597 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Diaph1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624774739,206 - 845,272 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624774738,717 - 845,187 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034960649   ⟹   XP_034816540
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24136,764,381 - 136,867,993 (-)NCBI
NHGRI_mPanPan15134,960,673 - 135,007,628 (-)NCBI
Mhudiblu_PPA_v05136,876,396 - 136,979,828 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034816540 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_034816540   ⟸   XM_034960649


Additional Information

Database Acc Id Source(s)
NCBI Gene DIAPH1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-14 DIAPH1  diaphanous related formin 1  LOC129397819  protein diaphanous homolog 1  Data Merged 737654 PROVISIONAL
2024-03-13 DIAPH1  diaphanous related formin 1  LOC100980841  protein diaphanous homolog 1  Symbol and/or name change 5135510 APPROVED
2023-05-02 LOC100980841  protein diaphanous homolog 1  DIAPH1  diaphanous related formin 1  Symbol and/or name change 5135510 APPROVED