Ankrd10 (ankyrin repeat domain 10) - Rat Genome Database

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Gene: Ankrd10 (ankyrin repeat domain 10) Mus musculus
Analyze
Symbol: Ankrd10
Name: ankyrin repeat domain 10
RGD ID: 1321440
MGI Page MGI
Description: Predicted to be located in nucleoplasm. Is expressed in several structures, including brain; branchial arch; genitourinary system; limb; and maxillary process. Orthologous to human ANKRD10 (ankyrin repeat domain 10).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4833425P12Rik; ankyrin repeat domain-containing protein 10; AW549277
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39811,661,581 - 11,694,617 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl811,661,583 - 11,685,757 (-)EnsemblGRCm39 Ensembl
GRCm38811,611,581 - 11,635,926 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl811,611,583 - 11,635,757 (-)EnsemblGRCm38mm10GRCm38
MGSCv37811,611,583 - 11,635,754 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36811,611,555 - 11,635,661 (-)NCBIMGSCv36mm8
Celera811,786,923 - 11,811,099 (-)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map85.73NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
butanal  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
chlorpyrifos  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
crocidolite asbestos  (ISO)
crotonaldehyde  (ISO)
cyclosporin A  (EXP,ISO)
dibutyl phthalate  (ISO)
dioxygen  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
etoposide  (ISO)
flusilazole  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
furan  (ISO)
gentamycin  (ISO)
hexaconazole  (EXP)
lead diacetate  (ISO)
leflunomide  (ISO)
melphalan  (ISO)
mercury dichloride  (ISO)
methimazole  (ISO)
methotrexate  (EXP)
methylmercury chloride  (ISO)
miconazole  (EXP)
mifepristone  (ISO)
mono(2-ethyl-5-oxohexyl) phthalate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methylformamide  (EXP)
ozone  (EXP)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
picoxystrobin  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
silicon dioxide  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sulfadimethoxine  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
triadimefon  (EXP)
Tributyltin oxide  (EXP)
triphenyl phosphate  (ISO)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:16325481   PMID:17967808   PMID:20059953   PMID:21267068   PMID:38355793  


Genomics

Comparative Map Data
Ankrd10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39811,661,581 - 11,694,617 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl811,661,583 - 11,685,757 (-)EnsemblGRCm39 Ensembl
GRCm38811,611,581 - 11,635,926 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl811,611,583 - 11,635,757 (-)EnsemblGRCm38mm10GRCm38
MGSCv37811,611,583 - 11,635,754 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36811,611,555 - 11,635,661 (-)NCBIMGSCv36mm8
Celera811,786,923 - 11,811,099 (-)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map85.73NCBI
ANKRD10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813110,878,540 - 110,915,069 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13110,878,540 - 110,915,069 (-)EnsemblGRCh38hg38GRCh38
GRCh3713111,530,887 - 111,567,416 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3613110,328,888 - 110,365,417 (-)NCBINCBI36Build 36hg18NCBI36
Build 3413110,328,888 - 110,365,417NCBI
Celera1392,377,096 - 92,413,637 (-)NCBICelera
Cytogenetic Map13q34NCBI
HuRef1392,129,277 - 92,165,583 (-)NCBIHuRef
CHM1_113111,499,320 - 111,535,592 (-)NCBICHM1_1
T2T-CHM13v2.013110,108,631 - 110,144,952 (-)NCBIT2T-CHM13v2.0
Ankrd10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81684,566,021 - 84,591,849 (+)NCBIGRCr8
mRatBN7.21677,866,489 - 77,889,745 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1677,864,261 - 77,889,745 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1683,146,972 - 83,170,221 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01686,599,610 - 86,622,859 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01681,841,711 - 81,864,966 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01683,205,898 - 83,229,147 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1683,206,004 - 83,228,194 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01682,674,123 - 82,697,366 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41682,719,075 - 82,742,218 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11682,683,443 - 82,728,069 (+)NCBI
Celera1675,666,484 - 75,689,725 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
Ankrd10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554041,928,307 - 1,954,193 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554041,928,285 - 1,954,193 (+)NCBIChiLan1.0ChiLan1.0
ANKRD10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v214112,376,756 - 112,413,464 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan113111,058,602 - 111,105,031 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01392,017,092 - 92,053,485 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113111,130,933 - 111,177,018 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13111,130,933 - 111,177,018 (-)Ensemblpanpan1.1panPan2
ANKRD10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12259,059,329 - 59,092,225 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2259,059,519 - 59,092,192 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2258,769,806 - 58,802,697 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02259,682,861 - 59,715,796 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2259,682,861 - 59,715,782 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12259,184,535 - 59,217,419 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02259,176,685 - 59,209,568 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02259,212,161 - 59,245,075 (-)NCBIUU_Cfam_GSD_1.0
Ankrd10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945193,896,199 - 193,926,454 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364722,025,695 - 2,056,126 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364722,025,701 - 2,055,956 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1177,323,358 - 77,356,112 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11177,323,355 - 77,356,049 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ANKRD10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1389,094,308 - 89,130,685 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl389,094,218 - 89,130,686 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604645,862,635 - 45,899,111 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247932,046,912 - 2,071,784 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247932,046,796 - 2,072,603 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ankrd10
1237 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:768
Count of miRNA genes:485
Interacting mature miRNAs:560
Transcripts:ENSMUST00000033905, ENSMUST00000169782
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357525Pnhdlc3_mplasma non-HDL cholesterol 3 (mouse)Not determined8721249923753815Mouse
11533914Mts5_mmammary tumor susceptibility 5 (mouse)8130447432Mouse
13432571Scvg1_msubcutaneous vessel growth QTL 1 (mouse)8124751082Mouse
14700791Mencq6_mmeniscus calcification QTL 6 (mouse)81102200012200000Mouse
14697703Stsl1_mSalmonella typhimurium susceptibility locus 1 (mouse)81135000017050016Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8798418941984342Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8810320142103372Mouse
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8495000035067154Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8810320142103372Mouse
4140978Nilac5_mnicotine induced locomotor activity 5 (mouse)Not determined8131773288Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8721249935110107Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8810320142103372Mouse

Markers in Region
AW549277  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38811,611,903 - 11,612,044UniSTSGRCm38
MGSCv37811,611,903 - 11,612,044UniSTSGRCm37
Celera811,787,243 - 11,787,384UniSTS
Cytogenetic Map8A1.1UniSTS
Whitehead/MRC_RH8138.13UniSTS
Ankrd10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8A1.1UniSTS
cM Map8 UniSTS
UniSTS:224894  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38811,611,731 - 11,611,923UniSTSGRCm38
MGSCv37811,611,731 - 11,611,923UniSTSGRCm37
Celera811,787,071 - 11,787,263UniSTS
Cytogenetic Map8A1.1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001167967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001281974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001281975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_030781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV319211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC033266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000033905   ⟹   ENSMUSP00000033905
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,661,584 - 11,685,754 (-)Ensembl
GRCm38.p6 Ensembl811,611,584 - 11,635,754 (-)Ensembl
Ensembl Acc Id: ENSMUST00000169782   ⟹   ENSMUSP00000131657
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,661,583 - 11,685,757 (-)Ensembl
GRCm38.p6 Ensembl811,611,583 - 11,635,757 (-)Ensembl
Ensembl Acc Id: ENSMUST00000209915   ⟹   ENSMUSP00000147518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,669,259 - 11,685,030 (-)Ensembl
GRCm38.p6 Ensembl811,619,259 - 11,635,030 (-)Ensembl
Ensembl Acc Id: ENSMUST00000210530   ⟹   ENSMUSP00000147908
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,661,583 - 11,685,754 (-)Ensembl
GRCm38.p6 Ensembl811,611,583 - 11,635,754 (-)Ensembl
Ensembl Acc Id: ENSMUST00000210876   ⟹   ENSMUSP00000147649
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,678,515 - 11,683,950 (-)Ensembl
GRCm38.p6 Ensembl811,628,515 - 11,633,950 (-)Ensembl
Ensembl Acc Id: ENSMUST00000211174   ⟹   ENSMUSP00000147295
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,661,584 - 11,685,754 (-)Ensembl
GRCm38.p6 Ensembl811,611,584 - 11,635,754 (-)Ensembl
Ensembl Acc Id: ENSMUST00000211389
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,677,669 - 11,685,754 (-)Ensembl
GRCm38.p6 Ensembl811,627,669 - 11,635,754 (-)Ensembl
Ensembl Acc Id: ENSMUST00000211445
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,664,963 - 11,685,036 (-)Ensembl
GRCm38.p6 Ensembl811,614,963 - 11,635,036 (-)Ensembl
Ensembl Acc Id: ENSMUST00000211690
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl811,661,585 - 11,674,626 (-)Ensembl
GRCm38.p6 Ensembl811,611,585 - 11,624,626 (-)Ensembl
RefSeq Acc Id: NM_001167967   ⟹   NP_001161439
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,663,841 - 11,685,757 (-)NCBI
GRCm38811,613,841 - 11,635,757 (-)NCBI
MGSCv37811,611,583 - 11,635,754 (-)RGD
Celera811,786,921 - 11,811,102 (-)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001281974   ⟹   NP_001268903
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,581 - 11,685,757 (-)NCBI
GRCm38811,611,581 - 11,635,757 (-)NCBI
Celera811,786,921 - 11,811,102 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001281975   ⟹   NP_001268904
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,581 - 11,685,757 (-)NCBI
GRCm38811,611,581 - 11,635,757 (-)NCBI
Celera811,786,921 - 11,811,102 (-)NCBI
Sequence:
RefSeq Acc Id: NM_133971   ⟹   NP_598732
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,581 - 11,685,757 (-)NCBI
GRCm38811,611,581 - 11,635,757 (-)NCBI
MGSCv37811,611,583 - 11,635,754 (-)RGD
Celera811,786,921 - 11,811,102 (-)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_030781
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,663,841 - 11,685,036 (-)NCBI
GRCm38811,613,841 - 11,635,036 (-)NCBI
MGSCv37811,611,583 - 11,635,754 (-)RGD
Celera811,786,921 - 11,811,102 (-)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006508685   ⟹   XP_006508748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,694,617 (-)NCBI
GRCm38811,611,583 - 11,635,926 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006508686   ⟹   XP_006508749
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,685,337 (-)NCBI
GRCm38811,611,583 - 11,635,339 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006508687   ⟹   XP_006508750
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,662,855 - 11,694,617 (-)NCBI
GRCm38811,612,880 - 11,635,926 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006508688   ⟹   XP_006508751
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,685,337 (-)NCBI
GRCm38811,611,583 - 11,635,340 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006508691   ⟹   XP_006508754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,685,337 (-)NCBI
GRCm38811,611,583 - 11,635,340 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243218   ⟹   XP_030099078
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,685,332 (-)NCBI
GRCm38811,611,583 - 11,635,335 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243221   ⟹   XP_030099081
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,685,332 (-)NCBI
GRCm38811,611,583 - 11,635,335 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243222   ⟹   XP_030099082
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,685,332 (-)NCBI
GRCm38811,611,583 - 11,635,335 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153709   ⟹   XP_036009602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39811,661,583 - 11,685,332 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001161439 (Get FASTA)   NCBI Sequence Viewer  
  NP_001268903 (Get FASTA)   NCBI Sequence Viewer  
  NP_001268904 (Get FASTA)   NCBI Sequence Viewer  
  NP_598732 (Get FASTA)   NCBI Sequence Viewer  
  XP_006508748 (Get FASTA)   NCBI Sequence Viewer  
  XP_006508749 (Get FASTA)   NCBI Sequence Viewer  
  XP_006508750 (Get FASTA)   NCBI Sequence Viewer  
  XP_006508751 (Get FASTA)   NCBI Sequence Viewer  
  XP_006508754 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099078 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099081 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099082 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009602 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH02198 (Get FASTA)   NCBI Sequence Viewer  
  BAC27561 (Get FASTA)   NCBI Sequence Viewer  
  BAC28396 (Get FASTA)   NCBI Sequence Viewer  
  BAC29941 (Get FASTA)   NCBI Sequence Viewer  
  BAC30470 (Get FASTA)   NCBI Sequence Viewer  
  BAC34485 (Get FASTA)   NCBI Sequence Viewer  
  BAC38664 (Get FASTA)   NCBI Sequence Viewer  
  BAC40310 (Get FASTA)   NCBI Sequence Viewer  
  EDL22072 (Get FASTA)   NCBI Sequence Viewer  
  EDL22073 (Get FASTA)   NCBI Sequence Viewer  
  EDL22074 (Get FASTA)   NCBI Sequence Viewer  
  EDL22075 (Get FASTA)   NCBI Sequence Viewer  
  EDL22076 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000033905
  ENSMUSP00000033905.6
  ENSMUSP00000131657
  ENSMUSP00000131657.2
  ENSMUSP00000147295.2
  ENSMUSP00000147518.2
  ENSMUSP00000147649.2
  ENSMUSP00000147908.2
GenBank Protein Q99LW0 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_598732   ⟸   NM_133971
- Peptide Label: isoform 1
- UniProtKB: Q99LW0 (UniProtKB/Swiss-Prot),   Q8BGB6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161439   ⟸   NM_001167967
- Peptide Label: isoform 2
- UniProtKB: Q8BG46 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001268903   ⟸   NM_001281974
- Peptide Label: isoform 3
- UniProtKB: Q99LW0 (UniProtKB/Swiss-Prot),   Q8BG46 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001268904   ⟸   NM_001281975
- Peptide Label: isoform 4
- UniProtKB: Q8BG46 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006508748   ⟸   XM_006508685
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006508749   ⟸   XM_006508686
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006508751   ⟸   XM_006508688
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006508754   ⟸   XM_006508691
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006508750   ⟸   XM_006508687
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_030099078   ⟸   XM_030243218
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030099082   ⟸   XM_030243222
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030099081   ⟸   XM_030243221
- Peptide Label: isoform X6
Ensembl Acc Id: ENSMUSP00000147295   ⟸   ENSMUST00000211174
Ensembl Acc Id: ENSMUSP00000147649   ⟸   ENSMUST00000210876
Ensembl Acc Id: ENSMUSP00000147908   ⟸   ENSMUST00000210530
Ensembl Acc Id: ENSMUSP00000033905   ⟸   ENSMUST00000033905
Ensembl Acc Id: ENSMUSP00000147518   ⟸   ENSMUST00000209915
Ensembl Acc Id: ENSMUSP00000131657   ⟸   ENSMUST00000169782
RefSeq Acc Id: XP_036009602   ⟸   XM_036153709
- Peptide Label: isoform X8

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99LW0-F1-model_v2 AlphaFold Q99LW0 1-415 view protein structure

Promoters
RGD ID:6842768
Promoter ID:MM_KWN:53623
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001167967,   NM_133971,   NR_030779,   NR_030780,   NR_030781,   UC009KVS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36811,635,006 - 11,636,652 (-)MPROMDB
RGD ID:8666435
Promoter ID:EPDNEW_M11249
Type:initiation region
Name:Ankrd10_1
Description:Mus musculus ankyrin repeat domain 10 , transcript variant 1,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38811,635,754 - 11,635,814EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921840 AgrOrtholog
Ensembl Genes ENSMUSG00000031508 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000033905 ENTREZGENE
  ENSMUST00000033905.13 UniProtKB/Swiss-Prot
  ENSMUST00000169782 ENTREZGENE
  ENSMUST00000169782.3 UniProtKB/TrEMBL
  ENSMUST00000209915.2 UniProtKB/TrEMBL
  ENSMUST00000210530.2 UniProtKB/TrEMBL
  ENSMUST00000210876.2 UniProtKB/TrEMBL
  ENSMUST00000211174.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:102334 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1921840 ENTREZGENE
NCBI Gene Ankrd10 ENTREZGENE
PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANKYRIN REPEAT FAMILY PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ank UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ankrd10 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1B0GQX7_MOUSE UniProtKB/TrEMBL
  A0A1B0GRG9_MOUSE UniProtKB/TrEMBL
  A0A1B0GRT0_MOUSE UniProtKB/TrEMBL
  A0A1B0GSE9_MOUSE UniProtKB/TrEMBL
  ANR10_MOUSE UniProtKB/Swiss-Prot
  Q8BG46 ENTREZGENE, UniProtKB/TrEMBL
  Q8BGB6 ENTREZGENE
  Q8BYG1_MOUSE UniProtKB/TrEMBL
  Q99LW0 ENTREZGENE
UniProt Secondary Q8BGB6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Ankrd10  ankyrin repeat domain 10  4833425P12Rik  RIKEN cDNA 4833425P12 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 4833425P12Rik  RIKEN cDNA 4833425P12 gene  Ankrd10  ankyrin repeat domain 10  Symbol and/or name change 5135510 APPROVED