Scara3 (scavenger receptor class A, member 3) - Rat Genome Database

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Gene: Scara3 (scavenger receptor class A, member 3) Mus musculus
Analyze
Symbol: Scara3
Name: scavenger receptor class A, member 3
RGD ID: 1319521
MGI Page MGI
Description: Predicted to be an extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in extracellular matrix organization. Predicted to be located in endoplasmic reticulum. Predicted to be part of collagen trimer. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including brain; embryo mesenchyme; jaw skeleton; long bone; and sensory organ. Orthologous to human SCARA3 (scavenger receptor class A member 3).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: APC7; C130058N24Rik; CSR; CSR1; MSLR1; MSRL1; scavenger receptor class A member 3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391466,156,844 - 66,191,427 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1466,156,843 - 66,191,384 (-)EnsemblGRCm39 Ensembl
GRCm381465,919,394 - 65,953,978 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1465,919,394 - 65,953,935 (-)EnsemblGRCm38mm10GRCm38
MGSCv371466,538,232 - 66,572,581 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361464,873,505 - 64,907,854 (-)NCBIMGSCv36mm8
Celera1463,672,278 - 63,706,586 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1434.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Scara3Mouseautosomal dominant nocturnal frontal lobe epilepsy  ISOSCARA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal dominant nocturnal frontal lobe epilepsyClinVarPMID:28492532
Scara3Mousebenign familial infantile seizures 6  ISOSCARA3 (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal dominant nocturnal frontal lobe epilepsyClinVarPMID:28492532

1 to 20 of 107 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Scara3Mouse1,2-dichloroethane decreases expressionEXP 6480464ethylene dichloride results in decreased expression of SCARA3 mRNACTDPMID:28960355
Scara3Mouse1-naphthyl isothiocyanate increases expressionISOScara3 (Rattus norvegicus)64804641-Naphthylisothiocyanate results in increased expression of SCARA3 mRNACTDPMID:30723492
Scara3Mouse17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of SCARA3 mRNACTDPMID:19484750
Scara3Mouse17beta-estradiol multiple interactionsISOScara3 (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SCARA3 mRNACTDPMID:32741896
Scara3Mouse17beta-estradiol 3-benzoate multiple interactionsISOScara3 (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SCARA3 mRNACTDPMID:32741896
Scara3Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of SCARA3 mRNACTDPMID:26290441
Scara3Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOSCARA3 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of SCARA3 mRNACTDPMID:29704546
Scara3Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOSCARA3 (Homo sapiens)6480464[Tetrachlorodibenzodioxin co-treated with 2-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide] results in increased expression of SCARA3 mRNACTDPMID:29704546
Scara3Mouse2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionEXP 64804642 more ...CTDPMID:38648751
Scara3Mouse2-palmitoylglycerol increases expressionISOSCARA3 (Homo sapiens)64804642-palmitoylglycerol results in increased expression of SCARA3 mRNACTDPMID:37199045
Scara3Mouse3,4-methylenedioxymethamphetamine increases expressionEXP 6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of SCARA3 mRNACTDPMID:20188158
Scara3Mouse3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOSCARA3 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of SCARA3 mRNACTDPMID:28628672
Scara3Mouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of SCARA3 mRNACTDPMID:30951980
Scara3Mouse5-aza-2'-deoxycytidine decreases methylationISOSCARA3 (Homo sapiens)6480464Decitabine results in decreased methylation of SCARA3 promoterCTDPMID:18676679
Scara3Mouse6-propyl-2-thiouracil decreases expressionISOScara3 (Rattus norvegicus)6480464Propylthiouracil results in decreased expression of SCARA3 mRNACTDPMID:24780913
Scara3Mouseacrylamide decreases expressionISOSCARA3 (Homo sapiens)6480464Acrylamide results in decreased expression of SCARA3 mRNACTDPMID:32763439
Scara3Mouseaflatoxin B1 decreases methylationISOSCARA3 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of SCARA3 geneCTDPMID:27153756
Scara3Mouseamphetamine increases expressionISOScara3 (Rattus norvegicus)6480464Amphetamine results in increased expression of SCARA3 mRNACTDPMID:30779732
Scara3Mousearsenous acid decreases expressionISOSCARA3 (Homo sapiens)6480464Arsenic Trioxide results in decreased expression of SCARA3 mRNACTDPMID:26705709
Scara3Mouseavobenzone increases expressionISOSCARA3 (Homo sapiens)6480464avobenzone results in increased expression of SCARA3 mRNACTDPMID:31016361

1 to 20 of 107 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Scara3Mouseextracellular matrix organization involved_inIBAPANTHER:PTN001166351 more ...2290270 GO_CentralGO_REF:0000033
Scara3Mousetoll-like receptor 3 signaling pathway NOT|involved_inISOSCARA3 (Homo sapiens)9068941 PMID:25204797UniProtPMID:25204797

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Scara3Mousecollagen trimer part_ofIEAUniProtKB-KW:KW-01762290270 UniProtGO_REF:0000043
Scara3Mousecollagen-containing extracellular matrix is_active_inIBAPANTHER:PTN001166351 more ...2290270 GO_CentralGO_REF:0000033
Scara3Mouseendoplasmic reticulum located_inISOUniProtKB:Q6AZY72290270 GO_CentralGO_REF:0000119
Scara3Mouseendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-00972290270 UniProtGO_REF:0000044
Scara3Mouseextracellular space is_active_inIBAPANTHER:PTN008390299 more ...2290270 GO_CentralGO_REF:0000033
Scara3MouseGolgi membrane located_inIEAUniProtKB-SubCell:SL-01342290270 UniProtGO_REF:0000044

Molecular Function

  


#
Reference Title
Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18287559   PMID:18554416   PMID:18973680  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:22008794   PMID:23341629   PMID:24563502   PMID:24952961   PMID:25600960   PMID:27689697   PMID:34254370   PMID:34321999   PMID:38355793  



Scara3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391466,156,844 - 66,191,427 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1466,156,843 - 66,191,384 (-)EnsemblGRCm39 Ensembl
GRCm381465,919,394 - 65,953,978 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1465,919,394 - 65,953,935 (-)EnsemblGRCm38mm10GRCm38
MGSCv371466,538,232 - 66,572,581 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361464,873,505 - 64,907,854 (-)NCBIMGSCv36mm8
Celera1463,672,278 - 63,706,586 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1434.36NCBI
SCARA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38827,633,463 - 27,734,141 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl827,633,868 - 27,676,776 (+)EnsemblGRCh38hg38GRCh38
GRCh37827,491,419 - 27,534,288 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36827,547,496 - 27,590,205 (+)NCBINCBI36Build 36hg18NCBI36
Build 34827,547,495 - 27,590,205NCBI
Celera826,451,665 - 26,494,373 (+)NCBICelera
Cytogenetic Map8p21.1NCBI
HuRef826,036,621 - 26,079,326 (+)NCBIHuRef
CHM1_1827,693,466 - 27,736,166 (+)NCBICHM1_1
T2T-CHM13v2.0827,910,729 - 28,013,971 (+)NCBIT2T-CHM13v2.0
Scara3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81544,315,422 - 44,348,416 (-)NCBIGRCr8
mRatBN7.21540,139,873 - 40,172,866 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1540,140,161 - 40,172,894 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1542,003,656 - 42,038,124 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01543,153,858 - 43,188,322 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01541,600,182 - 41,633,171 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01542,605,505 - 42,638,409 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1542,605,473 - 42,638,392 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01548,953,960 - 48,986,864 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41545,344,539 - 45,377,576 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11545,360,319 - 45,393,691 (-)NCBI
Celera1539,811,744 - 39,844,508 (-)NCBICelera
Cytogenetic Map15p12NCBI
Scara3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540350,185,037 - 50,226,030 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540350,185,857 - 50,223,340 (+)NCBIChiLan1.0ChiLan1.0
SCARA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2746,164,427 - 46,242,582 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1821,878,654 - 21,975,188 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0826,903,924 - 27,032,048 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1824,106,075 - 24,148,465 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl824,106,075 - 24,148,465 (+)Ensemblpanpan1.1panPan2
SCARA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12529,891,099 - 29,966,846 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2529,917,335 - 29,968,076 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2530,504,063 - 30,553,337 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02530,107,667 - 30,156,993 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2530,107,681 - 30,157,514 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12530,037,969 - 30,087,201 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02529,918,813 - 29,968,236 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02530,085,179 - 30,134,524 (-)NCBIUU_Cfam_GSD_1.0
Scara3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049438,025,043 - 8,050,941 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936675535,210 - 561,119 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936675541,829 - 561,110 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SCARA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1411,367,427 - 11,410,978 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11411,367,402 - 11,403,173 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21412,546,504 - 12,582,044 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SCARA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1825,741,988 - 25,779,224 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl825,742,127 - 25,782,247 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605216,360,511 - 16,399,973 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Scara3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475822,454,213 - 22,488,452 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475822,454,181 - 22,488,431 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Scara3
1076 total Variants

Predicted Target Of
Summary Value
Count of predictions:514
Count of miRNA genes:336
Interacting mature miRNAs:388
Transcripts:ENSMUST00000042046
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 21 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301489Lbm10_mlean body mass 10 (mouse)Not determined145376129687761529Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
4142364Pbwg18_mpostnatal body weight growth 18 (mouse)Not determined145228198486282125Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
10043889Cia52_mcollagen induced arthritis QTL 52 (mouse)Not determined145608238190082509Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse

1 to 10 of 21 rows





1 to 26 of 26 rows
RefSeq Transcripts NM_172604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC125058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC126444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 26 of 26 rows

Ensembl Acc Id: ENSMUST00000042046   ⟹   ENSMUSP00000046525
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1466,156,843 - 66,191,384 (-)Ensembl
GRCm38.p6 Ensembl1465,919,394 - 65,953,935 (-)Ensembl
RefSeq Acc Id: NM_172604   ⟹   NP_766192
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391466,156,844 - 66,191,193 (-)NCBI
GRCm381465,919,395 - 65,953,744 (-)NCBI
MGSCv371466,538,232 - 66,572,581 (-)RGD
Celera1463,672,278 - 63,706,586 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036158569   ⟹   XP_036014462
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391466,160,980 - 66,191,427 (-)NCBI
Sequence:
1 to 10 of 10 rows
Protein RefSeqs NP_766192 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014462 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH26446 (Get FASTA)   NCBI Sequence Viewer  
  AAH51636 (Get FASTA)   NCBI Sequence Viewer  
  BAC33332 (Get FASTA)   NCBI Sequence Viewer  
  BAC35687 (Get FASTA)   NCBI Sequence Viewer  
  EDL36010 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000046525
  ENSMUSP00000046525.4
GenBank Protein Q8C850 (Get FASTA)   NCBI Sequence Viewer  
1 to 10 of 10 rows
RefSeq Acc Id: NP_766192   ⟸   NM_172604
- UniProtKB: Q8C6N1 (UniProtKB/Swiss-Prot),   Q8C850 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000046525   ⟸   ENSMUST00000042046
RefSeq Acc Id: XP_036014462   ⟸   XM_036158569
- Peptide Label: isoform X1
Collagen-like

Name Modeler Protein Id AA Range Protein Structure
AF-Q8C850-F1-model_v2 AlphaFold Q8C850 1-606 view protein structure

RGD ID:8682778
Promoter ID:EPDNEW_M19420
Type:initiation region
Name:Scara3_1
Description:Mus musculus scavenger receptor class A, member 3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381465,953,743 - 65,953,803EPDNEW


1 to 17 of 17 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000034463 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000042046 ENTREZGENE
  ENSMUST00000042046.5 UniProtKB/Swiss-Prot
InterPro Collagen UniProtKB/Swiss-Prot
  Oxidative_Scav/Glycosyltrans UniProtKB/Swiss-Prot
KEGG Report mmu:219151 UniProtKB/Swiss-Prot
MGD MGI:2444418 ENTREZGENE
NCBI Gene 219151 ENTREZGENE
PANTHER PHOSPHOLIPASE C-BETA-2-RELATED UniProtKB/Swiss-Prot
  ZF-RING_7 DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot
Pfam Collagen UniProtKB/Swiss-Prot
PhenoGen Scara3 PhenoGen
UniProt Q8C6N1 ENTREZGENE
  Q8C850 ENTREZGENE
  Q8R374_MOUSE UniProtKB/TrEMBL
  SCAR3_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8C6N1 UniProtKB/Swiss-Prot
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