Symbol: |
CHURC1 |
Name: |
churchill domain containing 1 |
RGD ID: |
1312958 |
HGNC Page |
HGNC:20099 |
Description: |
Predicted to enable zinc ion binding activity. Predicted to be involved in fibroblast growth factor receptor signaling pathway. |
Type: |
protein-coding
|
RefSeq Status: |
VALIDATED |
Previously known as: |
C14orf52; chch; FLJ33064; FLJ51978; FLJ78804; My015; protein Churchill |
RGD Orthologs |
|
Alliance Orthologs |
|
More Info |
more info ...
|
More Info |
Species |
Gene symbol and name |
Data Source |
Assertion derived from |
less info ...
|
Orthologs 1 |
Mus musculus (house mouse): |
Churc1 (churchill domain containing 1) |
HGNC |
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam |
Rattus norvegicus (Norway rat): |
Churc1 (churchill domain containing 1) |
HGNC |
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam |
Chinchilla lanigera (long-tailed chinchilla): |
Churc1 (churchill domain containing 1) |
NCBI |
Ortholog |
Pan paniscus (bonobo/pygmy chimpanzee): |
CHURC1 (churchill domain containing 1) |
NCBI |
Ortholog |
Canis lupus familiaris (dog): |
CHURC1 (churchill domain containing 1) |
HGNC |
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam |
Ictidomys tridecemlineatus (thirteen-lined ground squirrel): |
Churc1 (churchill domain containing 1) |
NCBI |
Ortholog |
Sus scrofa (pig): |
CHURC1 (churchill domain containing 1) |
HGNC |
EggNOG, Ensembl, NCBI, OMA, Panther, Treefam |
Chlorocebus sabaeus (green monkey): |
CHURC1 (churchill domain containing 1) |
NCBI |
Ortholog |
Heterocephalus glaber (naked mole-rat): |
Churc1 (churchill domain containing 1) |
NCBI |
Ortholog |
Other homologs 2 |
Rattus norvegicus (Norway rat): |
Fntb (farnesyltransferase, CAAX box, subunit beta) |
HGNC |
EggNOG, Inparanoid, OrthoDB, Treefam |
Mus musculus (house mouse): |
Fntb (farnesyltransferase, CAAX box, beta) |
HGNC |
OrthoDB |
Alliance orthologs 3 |
Rattus norvegicus (Norway rat): |
Churc1 (churchill domain containing 1)
|
Alliance |
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid) |
Mus musculus (house mouse): |
Churc1 (churchill domain containing 1)
|
Alliance |
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid) |
Danio rerio (zebrafish): |
churc1 (churchill domain containing 1)
|
Alliance |
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid|ZFIN) |
Xenopus laevis (African clawed frog): |
churc1.S
|
Alliance |
DIOPT (Xenbase) |
Xenopus tropicalis (tropical clawed frog): |
churc1
|
Alliance |
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid) |
|
Allele / Splice: |
See ClinVar data |
Latest Assembly: |
GRCh38 - Human Genome Assembly GRCh38 |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 14 | 64,914,455 - 64,935,368 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 64,914,361 - 64,944,591 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 65,381,173 - 65,402,086 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 64,450,893 - 64,471,666 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 64,450,892 - 64,471,666 | NCBI | | | | | Celera | 14 | 45,435,725 - 45,456,498 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q23.3 | NCBI | | | | | HuRef | 14 | 45,550,703 - 45,571,710 (+) | NCBI | | HuRef | | | CHM1_1 | 14 | 65,319,246 - 65,340,255 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 59,119,323 - 59,140,237 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
JBrowse: |
View Region in Genome Browser (JBrowse)
|
Model |
|
CHURC1 | Human | 1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [2 more ... | CTD | PMID:25510870 | CHURC1 | Human | 1,2-dimethylhydrazine | decreases expression | ISO | Churc1 (Mus musculus) | 6480464 | 1 and 2-Dimethylhydrazine results in decreased expression of CHURC1 mRNA | CTD | PMID:22206623 | CHURC1 | Human | 1,2-dimethylhydrazine | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of CHURC1 mRNA | CTD | PMID:22206623 | CHURC1 | Human | 2,2',4,4',5,5'-hexachlorobiphenyl | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [2 more ... | CTD | PMID:25510870 | CHURC1 | Human | 2,2',5,5'-tetrachlorobiphenyl | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [2 more ... | CTD | PMID:25510870 | CHURC1 | Human | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | ISO | Churc1 (Mus musculus) | 6480464 | Tetrachlorodibenzodioxin affects the expression of CHURC1 mRNA | CTD | PMID:21570461 | CHURC1 | Human | 2,3,7,8-tetrachlorodibenzodioxine | decreases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | Tetrachlorodibenzodioxin results in decreased expression of CHURC1 mRNA | CTD | PMID:34747641 | CHURC1 | Human | 2,4,4'-trichlorobiphenyl | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [2 more ... | CTD | PMID:25510870 | CHURC1 | Human | 3H-1,2-dithiole-3-thione | decreases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | 1 and 2-dithiol-3-thione results in decreased expression of CHURC1 mRNA | CTD | PMID:19162173 | CHURC1 | Human | 4,4'-sulfonyldiphenol | increases expression | ISO | Churc1 (Mus musculus) | 6480464 | bisphenol S results in increased expression of CHURC1 mRNA | CTD | PMID:39298647 | CHURC1 | Human | acetamide | decreases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | acetamide results in decreased expression of CHURC1 mRNA | CTD | PMID:31881176 | CHURC1 | Human | aristolochic acid A | increases expression | EXP | | 6480464 | aristolochic acid I results in increased expression of CHURC1 mRNA | CTD | PMID:33212167 | CHURC1 | Human | benzo[a]pyrene | affects methylation | EXP | | 6480464 | Benzo(a)pyrene affects the methylation of CHURC1 promoter | CTD | PMID:27901495 | CHURC1 | Human | bisphenol A | affects expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | bisphenol A affects the expression of CHURC1 mRNA | CTD | PMID:25181051 | CHURC1 | Human | bisphenol A | decreases expression | ISO | Churc1 (Mus musculus) | 6480464 | bisphenol A results in decreased expression of CHURC1 mRNA | CTD | PMID:32156529 | CHURC1 | Human | bisphenol A | increases expression | ISO | Churc1 (Mus musculus) | 6480464 | bisphenol A results in increased expression of CHURC1 mRNA | CTD | PMID:33221593 and PMID:38074096 | CHURC1 | Human | buspirone | increases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | Buspirone results in increased expression of CHURC1 mRNA | CTD | PMID:24136188 | CHURC1 | Human | CGP 52608 | multiple interactions | EXP | | 6480464 | CGP 52608 promotes the reaction [RORA protein binds to CHURC1 gene] | CTD | PMID:28238834 | CHURC1 | Human | choline | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CHURC1 gene | CTD | PMID:20938992 | CHURC1 | Human | cocaine | decreases expression | EXP | | 6480464 | Cocaine results in decreased expression of CHURC1 mRNA | CTD | PMID:15009677 and PMID:16710320 | CHURC1 | Human | disodium selenite | increases expression | EXP | | 6480464 | Sodium Selenite results in increased expression of CHURC1 mRNA | CTD | PMID:18175754 | CHURC1 | Human | diuron | increases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | Diuron results in increased expression of CHURC1 mRNA | CTD | PMID:21551480 | CHURC1 | Human | folic acid | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [1 more ... | CTD | PMID:20938992 and PMID:22206623 | CHURC1 | Human | folic acid | decreases expression | ISO | Churc1 (Mus musculus) | 6480464 | Folic Acid results in decreased expression of CHURC1 mRNA | CTD | PMID:25629700 | CHURC1 | Human | heroin | decreases expression | EXP | | 6480464 | Heroin results in decreased expression of CHURC1 mRNA | CTD | PMID:16710320 | CHURC1 | Human | L-methionine | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CHURC1 gene | CTD | PMID:20938992 | CHURC1 | Human | leflunomide | increases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | leflunomide results in increased expression of CHURC1 mRNA | CTD | PMID:24136188 | CHURC1 | Human | methylmercury chloride | decreases expression | EXP | | 6480464 | methylmercuric chloride results in decreased expression of CHURC1 mRNA | CTD | PMID:28001369 | CHURC1 | Human | methylparaben | decreases expression | EXP | | 6480464 | methylparaben results in decreased expression of CHURC1 mRNA | CTD | PMID:31745603 | CHURC1 | Human | nefazodone | increases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | nefazodone results in increased expression of CHURC1 mRNA | CTD | PMID:24136188 | CHURC1 | Human | nimesulide | increases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | nimesulide results in increased expression of CHURC1 mRNA | CTD | PMID:24136188 | CHURC1 | Human | okadaic acid | decreases expression | EXP | | 6480464 | Okadaic Acid results in decreased expression of CHURC1 mRNA | CTD | PMID:38832940 | CHURC1 | Human | PCB138 | multiple interactions | ISO | Churc1 (Mus musculus) | 6480464 | [2 more ... | CTD | PMID:25510870 | CHURC1 | Human | sunitinib | decreases expression | EXP | | 6480464 | Sunitinib results in decreased expression of CHURC1 mRNA | CTD | PMID:31533062 | CHURC1 | Human | tetrachloromethane | decreases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | Carbon Tetrachloride results in decreased expression of CHURC1 mRNA | CTD | PMID:33387578 | CHURC1 | Human | thalidomide | decreases expression | ISO | Churc1 (Mus musculus) | 6480464 | Thalidomide results in decreased expression of CHURC1 mRNA | CTD | PMID:26217789 | CHURC1 | Human | thioacetamide | decreases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | Thioacetamide results in decreased expression of CHURC1 mRNA | CTD | PMID:34492290 | CHURC1 | Human | titanium dioxide | decreases methylation | ISO | Churc1 (Mus musculus) | 6480464 | titanium dioxide results in decreased methylation of CHURC1 gene and titanium dioxide results in decreased methylation of CHURC1 promoter | CTD | PMID:35295148 | CHURC1 | Human | tolcapone | decreases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | tolcapone results in decreased expression of CHURC1 mRNA | CTD | PMID:24136188 | CHURC1 | Human | toluene | decreases expression | ISO | Churc1 (Rattus norvegicus) | 6480464 | Toluene results in decreased expression of CHURC1 mRNA | CTD | PMID:22967744 | CHURC1 | Human | tremolite asbestos | increases expression | ISO | Churc1 (Mus musculus) | 6480464 | tremolite results in increased expression of CHURC1 mRNA | CTD | PMID:29279043 | CHURC1 | Human | tungsten | increases expression | ISO | Churc1 (Mus musculus) | 6480464 | Tungsten results in increased expression of CHURC1 mRNA | CTD | PMID:30912803 | CHURC1 | Human | uranium atom | increases expression | EXP | | 6480464 | Uranium results in increased expression of CHURC1 mRNA | CTD | PMID:15672453 | CHURC1 | Human | urethane | decreases expression | EXP | | 6480464 | Urethane results in decreased expression of CHURC1 mRNA | CTD | PMID:28818685 | CHURC1 | Human | valproic acid | affects expression | EXP | | 6480464 | Valproic Acid affects the expression of CHURC1 mRNA | CTD | PMID:25979313 | CHURC1 | Human | valproic acid | increases expression | EXP | | 6480464 | Valproic Acid results in increased expression of CHURC1 mRNA | CTD | PMID:23179753 and PMID:27188386 |
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO) | 1,2-dimethylhydrazine (ISO) | 2,2',4,4',5,5'-hexachlorobiphenyl (ISO) | 2,2',5,5'-tetrachlorobiphenyl (ISO) | 2,3,7,8-tetrachlorodibenzodioxine (ISO) | 2,4,4'-trichlorobiphenyl (ISO) | 3H-1,2-dithiole-3-thione (ISO) | 4,4'-sulfonyldiphenol (ISO) | acetamide (ISO) | aristolochic acid A (EXP) | benzo[a]pyrene (EXP) | bisphenol A (ISO) | buspirone (ISO) | CGP 52608 (EXP) | choline (ISO) | cocaine (EXP) | disodium selenite (EXP) | diuron (ISO) | folic acid (ISO) | heroin (EXP) | L-methionine (ISO) | leflunomide (ISO) | methylmercury chloride (EXP) | methylparaben (EXP) | nefazodone (ISO) | nimesulide (ISO) | okadaic acid (EXP) | PCB138 (ISO) | sunitinib (EXP) | tetrachloromethane (ISO) | thalidomide (ISO) | thioacetamide (ISO) | titanium dioxide (ISO) | tolcapone (ISO) | toluene (ISO) | tremolite asbestos (ISO) | tungsten (ISO) | uranium atom (EXP) | urethane (EXP) | valproic acid (EXP) |
CHURC1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 14 | 64,914,455 - 64,935,368 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 64,914,361 - 64,944,591 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 65,381,173 - 65,402,086 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 64,450,893 - 64,471,666 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 64,450,892 - 64,471,666 | NCBI | | | | | Celera | 14 | 45,435,725 - 45,456,498 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q23.3 | NCBI | | | | | HuRef | 14 | 45,550,703 - 45,571,710 (+) | NCBI | | HuRef | | | CHM1_1 | 14 | 65,319,246 - 65,340,255 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 59,119,323 - 59,140,237 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Churc1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 12 | 76,812,312 - 76,829,954 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 76,812,312 - 76,829,954 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 76,765,538 - 76,783,180 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 76,765,538 - 76,783,180 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 77,866,560 - 77,884,167 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 77,684,387 - 77,702,020 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 77,847,888 - 77,865,485 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | C3 | NCBI | | | | | cM Map | 12 | 33.73 | NCBI | | | | |
|
Churc1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 101,203,778 - 101,218,364 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 95,464,488 - 95,485,208 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 95,470,683 - 95,619,586 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 95,859,353 - 95,873,851 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 96,157,893 - 96,172,388 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 95,586,691 - 95,601,186 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 99,817,439 - 99,831,574 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 99,817,431 - 99,831,576 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 109,213,899 - 109,228,034 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 99,349,205 - 99,364,032 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 99,352,657 - 99,367,493 (+) | NCBI | | | | | Celera | 6 | 93,889,940 - 93,904,373 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q24 | NCBI | | | | |
|
Churc1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955466 | 4,855,509 - 5,013,568 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955466 | 4,991,571 - 5,013,568 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
CHURC1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 15 | 66,028,203 - 66,048,812 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 65,244,726 - 65,265,325 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 45,497,783 - 45,518,393 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 64,377,180 - 64,406,694 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 64,377,180 - 64,398,135 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
CHURC1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 8 | 39,301,090 - 39,318,352 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 38,993,476 - 39,010,423 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 39,524,123 - 39,541,093 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 39,523,840 - 39,541,089 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 39,145,417 - 39,162,376 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 39,218,253 - 39,235,185 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 39,577,289 - 39,594,268 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Churc1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 65,604,640 - 65,623,823 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936495 | 8,567,894 - 8,713,978 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936495 | 8,567,908 - 8,587,059 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
CHURC1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 88,985,083 - 89,012,131 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 88,985,019 - 89,013,119 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 95,365,933 - 95,394,085 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
CHURC1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 24 | 42,127,080 - 42,155,572 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 42,127,093 - 42,148,474 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 30,297,389 - 30,326,344 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Churc1 (Heterocephalus glaber - naked mole-rat) |
|
.
Predicted Target Of
Count of predictions: | 4574 | Count of miRNA genes: | 1047 | Interacting mature miRNAs: | 1258 | Transcripts: | ENST00000359118, ENST00000547625, ENST00000548752, ENST00000549115, ENST00000551093, ENST00000551947, ENST00000552002, ENST00000556089, ENST00000607599 | Prediction methods: | Miranda, Rnahybrid, Targetscan | Result types: | miRGate_prediction |
597481016 | GWAS1577090_H | protein measurement QTL GWAS1577090 (human) | | 6e-09 | protein measurement | | 14 | 64931887 | 64931888 | Human |
Cda1ka10 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,401,517 - 65,401,649 | UniSTS | GRCh37 | Build 36 | 14 | 64,471,270 - 64,471,402 | RGD | NCBI36 | Celera | 14 | 45,456,102 - 45,456,234 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,571,141 - 45,571,273 | UniSTS | | GeneMap99-GB4 RH Map | 14 | 153.24 | UniSTS | | NCBI RH Map | 14 | 647.8 | UniSTS | |
|
RH68912 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,400,640 - 65,400,776 | UniSTS | GRCh37 | Build 36 | 14 | 64,470,393 - 64,470,529 | RGD | NCBI36 | Celera | 14 | 45,455,225 - 45,455,361 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,570,264 - 45,570,400 | UniSTS | | GeneMap99-GB4 RH Map | 14 | 153.24 | UniSTS | | NCBI RH Map | 14 | 647.8 | UniSTS | |
|
RH123549 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,393,684 - 65,394,003 | UniSTS | GRCh37 | Build 36 | 14 | 64,463,437 - 64,463,756 | RGD | NCBI36 | Celera | 14 | 45,448,269 - 45,448,588 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,563,308 - 45,563,627 | UniSTS | | TNG Radiation Hybrid Map | 14 | 20810.0 | UniSTS | |
|
D14S712E |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,399,957 - 65,400,064 | UniSTS | GRCh37 | Build 36 | 14 | 64,469,710 - 64,469,817 | RGD | NCBI36 | Celera | 14 | 45,454,542 - 45,454,649 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,569,581 - 45,569,688 | UniSTS | |
|
SHGC-33304 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,398,889 - 65,399,018 | UniSTS | GRCh37 | Build 36 | 14 | 64,468,642 - 64,468,771 | RGD | NCBI36 | Celera | 14 | 45,453,474 - 45,453,603 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,568,513 - 45,568,642 | UniSTS | | TNG Radiation Hybrid Map | 14 | 20813.0 | UniSTS | | Stanford-G3 RH Map | 14 | 2258.0 | UniSTS | | NCBI RH Map | 14 | 653.0 | UniSTS | | GeneMap99-G3 RH Map | 14 | 2306.0 | UniSTS | |
|
RH44676 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,398,851 - 65,399,018 | UniSTS | GRCh37 | Build 36 | 14 | 64,468,604 - 64,468,771 | RGD | NCBI36 | Celera | 14 | 45,453,436 - 45,453,603 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,568,475 - 45,568,642 | UniSTS | | GeneMap99-GB4 RH Map | 14 | 153.04 | UniSTS | | NCBI RH Map | 14 | 647.8 | UniSTS | |
|
SGC33171 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,399,760 - 65,399,909 | UniSTS | GRCh37 | Build 36 | 14 | 64,469,513 - 64,469,662 | RGD | NCBI36 | Celera | 14 | 45,454,345 - 45,454,494 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,569,384 - 45,569,533 | UniSTS | | GeneMap99-GB4 RH Map | 14 | 153.24 | UniSTS | | Whitehead-RH Map | 14 | 228.7 | UniSTS | | NCBI RH Map | 14 | 647.8 | UniSTS | |
|
A006H20 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,399,098 - 65,399,318 | UniSTS | GRCh37 | Build 36 | 14 | 64,468,851 - 64,469,071 | RGD | NCBI36 | Celera | 14 | 45,453,683 - 45,453,903 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,568,722 - 45,568,942 | UniSTS | | GeneMap99-GB4 RH Map | 14 | 153.24 | UniSTS | | NCBI RH Map | 14 | 647.8 | UniSTS | |
|
A002U27 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,401,592 - 65,401,698 | UniSTS | GRCh37 | Build 36 | 14 | 64,471,345 - 64,471,451 | RGD | NCBI36 | Celera | 14 | 45,456,177 - 45,456,283 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,571,216 - 45,571,322 | UniSTS | | GeneMap99-GB4 RH Map | 14 | 153.04 | UniSTS | | NCBI RH Map | 14 | 647.8 | UniSTS | |
|
WI-11285 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,399,188 - 65,399,337 | UniSTS | GRCh37 | Build 36 | 14 | 64,468,941 - 64,469,090 | RGD | NCBI36 | Celera | 14 | 45,453,773 - 45,453,922 | RGD | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,568,812 - 45,568,961 | UniSTS | | GeneMap99-GB4 RH Map | 14 | 153.24 | UniSTS | | Whitehead-RH Map | 14 | 228.7 | UniSTS | | NCBI RH Map | 14 | 647.8 | UniSTS | |
|
G32354 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 14 | 65,399,098 - 65,399,318 | UniSTS | GRCh37 | Celera | 14 | 45,453,683 - 45,453,903 | UniSTS | | Cytogenetic Map | 14 | q23.3 | UniSTS | | HuRef | 14 | 45,568,722 - 45,568,942 | UniSTS | |
|
D11S3316 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
Cytogenetic Map | 6 | p21 | UniSTS | | Cytogenetic Map | 16 | q24 | UniSTS | | Cytogenetic Map | 12 | q24.31 | UniSTS | | Cytogenetic Map | 14 | q23.3 | UniSTS | | Cytogenetic Map | 22 | q13.1 | UniSTS | | Cytogenetic Map | 16 | p13.3 | UniSTS | | Cytogenetic Map | 17 | q22 | UniSTS | | Cytogenetic Map | 17 | p13.1 | UniSTS | | Cytogenetic Map | 5 | q33.3 | UniSTS | | Cytogenetic Map | 10 | q11.1 | UniSTS | | Cytogenetic Map | X | p11.4 | UniSTS | | Cytogenetic Map | 1 | q23.1 | UniSTS | | Cytogenetic Map | 10 | q22 | UniSTS | | Cytogenetic Map | 2 | q31.1 | UniSTS | | Cytogenetic Map | 3 | q21.3 | UniSTS | | Cytogenetic Map | 7 | p15-p14 | UniSTS | | Cytogenetic Map | 2 | p11.2 | UniSTS | | Cytogenetic Map | 4 | p12 | UniSTS | | Cytogenetic Map | 1 | q42.1 | UniSTS | | Cytogenetic Map | 16 | q22.1 | UniSTS | | Cytogenetic Map | 18 | q11.2 | UniSTS | | Cytogenetic Map | 11 | q24.2 | UniSTS | | Cytogenetic Map | 7 | q22.1 | UniSTS | | Cytogenetic Map | 2 | p12-p11.2 | UniSTS | | Cytogenetic Map | 19 | q13.3 | UniSTS | | Cytogenetic Map | X | p22 | UniSTS | | Cytogenetic Map | 11 | q23.3 | UniSTS | | Cytogenetic Map | 11 | q13.2 | UniSTS | | Cytogenetic Map | 11 | q13 | UniSTS | | Cytogenetic Map | 12 | q13-q14 | UniSTS | | Cytogenetic Map | 8 | p11.22 | UniSTS | | Cytogenetic Map | 1 | q32 | UniSTS | | Cytogenetic Map | 11 | q12-q13.2 | UniSTS | | Cytogenetic Map | 1 | p34 | UniSTS | | Cytogenetic Map | 20 | p13 | UniSTS | | Cytogenetic Map | 12 | q22 | UniSTS | | Cytogenetic Map | 1 | p36.32 | UniSTS | | Cytogenetic Map | 20 | q13.13 | UniSTS | | Cytogenetic Map | 6 | q22.31 | UniSTS | | Cytogenetic Map | 2 | q11.2 | UniSTS | | Cytogenetic Map | 1 | p21 | UniSTS | | Cytogenetic Map | 11 | q22.3 | UniSTS | | Cytogenetic Map | 16 | q12.2 | UniSTS | | Cytogenetic Map | 19 | q13.32 | UniSTS | | Cytogenetic Map | 4 | q31.3 | UniSTS | | Cytogenetic Map | 20 | q13.1 | UniSTS | | Cytogenetic Map | 16 | p11.2 | UniSTS | | Cytogenetic Map | 12 | q13.11-q14.3 | UniSTS | | Cytogenetic Map | 3 | q13.33 | UniSTS | | Cytogenetic Map | 6 | p22.2 | UniSTS | | Cytogenetic Map | 3 | q26.33 | UniSTS | | Cytogenetic Map | 6 | p21.3 | UniSTS | | Cytogenetic Map | 8 | q24.11 | UniSTS | | Cytogenetic Map | 15 | q13.1 | UniSTS | | Cytogenetic Map | 10 | q22.2 | UniSTS | | Cytogenetic Map | 2 | p14 | UniSTS | | Cytogenetic Map | 15 | q11.2 | UniSTS | | Cytogenetic Map | 19 | q13.12 | UniSTS | | Cytogenetic Map | 7 | q11.23 | UniSTS | | Cytogenetic Map | 11 | p15.5 | UniSTS | | Cytogenetic Map | 9 | q33.3 | UniSTS | | Cytogenetic Map | X | q24 | UniSTS | | Cytogenetic Map | 17 | q25.3 | UniSTS | | Cytogenetic Map | 10 | q26.13 | UniSTS | | Cytogenetic Map | 19 | p13.3 | UniSTS | | Cytogenetic Map | 16 | p13.2 | UniSTS | | Cytogenetic Map | 15 | q14-q15 | UniSTS | | Cytogenetic Map | 15 | q21.2 | UniSTS | | Cytogenetic Map | 19 | q13 | UniSTS | | Cytogenetic Map | 6 | p21.31 | UniSTS | | Cytogenetic Map | 2 | p15 | UniSTS | | Cytogenetic Map | 5 | q13 | UniSTS | | Cytogenetic Map | 5 | q13.2 | UniSTS | | Cytogenetic Map | 17 | q25.1 | UniSTS | | Cytogenetic Map | 10 | q26.1 | UniSTS | | Cytogenetic Map | 4 | q26 | UniSTS | | Cytogenetic Map | 1 | q25.2 | UniSTS | | Cytogenetic Map | 4 | q21.1 | UniSTS | | Cytogenetic Map | 22 | q11.23 | UniSTS | | Cytogenetic Map | 19 | p13.2 | UniSTS | | Cytogenetic Map | 15 | q25.2 | UniSTS | | Cytogenetic Map | 13 | q13.1 | UniSTS | | Cytogenetic Map | 6 | p21.2 | UniSTS | | Cytogenetic Map | 11 | q13.1 | UniSTS | | Cytogenetic Map | 16 | p12.2 | UniSTS | | Cytogenetic Map | 13 | q14 | UniSTS | | Cytogenetic Map | 7 | q21-q22 | UniSTS | | Cytogenetic Map | 12 | q | UniSTS | | Cytogenetic Map | 10 | q11.23 | UniSTS | | Cytogenetic Map | 1 | p34.1 | UniSTS | | Cytogenetic Map | 3 | p21.31 | UniSTS | | Cytogenetic Map | 14 | q31 | UniSTS | |
|
|
alimentary part of gastrointestinal system
| | | | | |
entire extraembryonic component
| | | | | | | | | | | | | | |
1204
|
2439
|
2788
|
2253
|
4974
|
1726
|
2351
|
6
|
624
|
1951
|
465
|
2270
|
7306
|
6472
|
53
|
3734
|
1
|
852
|
1744
|
1617
|
175
|
1
|
Ensembl Acc Id: |
ENST00000547625 ⟹ ENSP00000449184 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,924,010 - 64,930,937 (+) | Ensembl |
|
Ensembl Acc Id: |
ENST00000548752 ⟹ ENSP00000450165 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,914,415 - 64,932,320 (+) | Ensembl |
|
Ensembl Acc Id: |
ENST00000549115 ⟹ ENSP00000448050 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,914,455 - 64,935,368 (+) | Ensembl |
|
Ensembl Acc Id: |
ENST00000551093 ⟹ ENSP00000446610 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,914,477 - 64,944,056 (+) | Ensembl |
|
Ensembl Acc Id: |
ENST00000551947 ⟹ ENSP00000446697 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,914,443 - 64,944,591 (+) | Ensembl |
|
Ensembl Acc Id: |
ENST00000552002 ⟹ ENSP00000450144 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,914,455 - 64,935,368 (+) | Ensembl |
|
Ensembl Acc Id: |
ENST00000556089 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,914,458 - 64,924,484 (+) | Ensembl |
|
Ensembl Acc Id: |
ENST00000607599 ⟹ ENSP00000475473 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 14 | 64,914,361 - 64,935,368 (+) | Ensembl |
|
RefSeq Acc Id: |
NM_001204064 ⟹ NP_001190993 |
RefSeq Status: |
VALIDATED |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38 | 14 | 64,914,455 - 64,935,368 (+) | NCBI | GRCh37 | 14 | 65,381,079 - 65,410,635 (+) | NCBI | HuRef | 14 | 45,550,703 - 45,571,710 (+) | ENTREZGENE | CHM1_1 | 14 | 65,319,246 - 65,340,255 (+) | NCBI | T2T-CHM13v2.0 | 14 | 59,119,323 - 59,140,237 (+) | NCBI |
|
Sequence: |
CCCGGAAGCGTTGGAGGACATTCCCTGTTGACTGCGTCGCGATGTGTGGCGACTGTGTGGAGAAGGAATATCCCAACCGGGGTAATACCTGCCTGGAGAATGGATCTTTCTTACTGAACTTTACAGGC TGTGCAGTGTGCAGTAAGCGGGATTTTATGCTGATCACAAACAAATCCTTGAAAGAAGAAGATGGAGAAGAAATAGTTACCTATGATCGAGTATACCATGCTGTGTCTGTTATGCGGCAAAGCCGAAG ATACTATCAGTATTCTCCCTGATGACCCCCGACAAATGACTCTCTTATTCTAAGGATCCTTCTACAGATCTGTTATAACTATATTGTGTTGGTTTACAATACAGCAAGCCTGATGGTTTGTCTTATTT CATTCATACTGAAAATTCTTTGCATATTTTTTTTCTGCTTAGACTTACTTATTCTTTGAGGAAAAAAGGTAATGTAGGAGCTCATTGTTCTCTAGAGCTGAGCTCTTCTGCTAAAGTTCAAAGTTCAC ATCAGTGTAGCCAGAGTGAAGCATCTTTGTTAGCAGTTATGTGGTCAGAAAACAACTAGAATGGGAGCACACCTGGTGCCCAGATTTTGGTTTCCAATAAAAGGAACCAGGACTCCTTAGAAAATGAA CTGATTCTAGAACTGGGATATGAACTGTACAAGATGAGCCTAGAGTATCTTGTGCCACAGAAAAATGAAGTACTGAAATTAAAAAAAAAAAATCATAGTGATTGGGAGTATGTCAGCATGATCGAACT GAAGGATCTCTGAAAGGCCACAGCTGGAGCAATTTGAGTAACAAAATAAAGTAGTATTGGGTTATAACCCAAACTATATAATAAATATTTACAAGCCCAAACTAATATAAATGATTGAATGGGAACAA ATCTCTTGTGCAGAAGAATTTCAAATAATTTATGTAGATACTCCCCACTTAGTGGGCTCTGCATAGTGACTTCCTTGCAGAGTATAATATGGAAAGGGGGGAAAAGAGTAACTTTACAGTGGAGAAAT CTGACAGACACCAGCTCAGCCAGGTGATTGAGGTTAACATCATCCATGATAAGCCCTTTTGATAGCATGTATCCTTGATAGCATCACATCATACAGAATGTGATAAGAATGGCACTTTACCTCTGTGG TCCTCCTCCCCAGAACTCAGAACCCAAGTCTGATCAGGAGAAAAACATCACACAAATTCCAATTGAGAAGCATTCTTTAAAATACCTAACCAGTACTTCTCAAAACTATCAAGGCCATAAAAAACAAG GAAAATCTGAGACATGGTCACAGCCAAGAGGAGCCTGAGAAGACATGACTGCTAGATGTAATGTGGTATCCTACATGGAATTATATACCACGAAAAGAAAAAAAGGTCATTTGGTAGAAACTAGGGAA ATCTGAATACAGTGTGGACTTCAGTTAATATAAATGAGAAAATGGTTTCATTGGCTTTAAAGGGATTTTAGAATATCTTACTTTGCATAGTTTCATGAGCACTGGCCAGGAGGTTATAAACTGGCATT TAGGCCTCTCTGCCATTTAGTAGCAGTATAGTCATTAAGCAAAGCATTACTCTGGACTTTATTGTCCTGTTTCTATCAAATTGGACTAACAAAAATTGATATAATACATTCATCACAGTATTGTTAGG AGATTTAAATGAATTAGTGAATGTAAGATACTTTAGAAAGCATGTAAAGTACTAGAAACAATGAGGTGGCTTCAATTAGTGCTCATTCTGAGACCTAAATTTAAAGGGTCAGGCATTAGAAACAAAAG TGTTTCTTCATATCTAGGAGATTTGGAAATTCTGAACTAAGGTCTTATAAGAACAAGAAATGAGCAAAGTGTTCATTGTAGATACTAGGGAAAAGCTTTGTTGAATAACAGTAATGATGATAATATCT GAGCTTTATTAAGTACTTACTACATGCTAAGAGCTTTTTAAGCACTTATTTAATCCTCATTAACAAATTCATAAGGTAGGTGCTATTGATAGTTTAGCCATAACCAGATATGGCTTGTTATTTGTAAG TTATCATGAAAAGGTTTATATTCACTATTCTTTATTTCAGTGTAGCACTTTTAGAGCCAAAAAAACTCAGGCACAAAGAAGTTAAATAACTTGCCGGGTGCGGTGGCTCACCCCTGTAATCCCAGCAC TTTGGGAGGCCAAAGCAGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCGGGCCAACATGGTGCAACCTCGTCTTTACTAAAAATACAAAAACAAAAATTAGCCAGGGGTGGTGGTATGCACCT GCAGTCCCAGCAACATGGGAGGCTGAACAGGAGAATCGCTTGAACCCGCGACAGGGAGGTTGTGATGAGCCAAGGTCATGCCACTGCACTCCAGCCTGGGAGACAGAGCAAGACTCCATCTCAAAAAC AAAAACAAAACAAAACAACAACAAAAAAAGAAGTTAAATAACTTGTTTAAGATCACACAGCTAGTGCAGTTACCCCCTCTCAGTAATTATGTTTGGCAAATATGAAATACAAGGATCTGGCAAGGTTA GGAAGAGGTTAAGAATATCAGTGACAGTACTCTGAGGCATCTGGGCATGTCAGATGAAGATTTATTATTCAGAAAAGTTAAGTCAGCTGTTGCAGGGATCAGTTGTTTTATTCCTGGAAAATGTTTTT CATTTTGCTGCAAATCTATATCTGACCTGCTGAGGAAATCGTTTGGTGAAATGAATCCAGAAAGCAGAGAAAATGCTTCATTACTTTAAATAGCAGCATTAAGCCCATTATAGCCTCTGAATTGTCCC TTCCTTGAGTTTGCTAATGCTTCCAACTTAGTCATTTGAAGCCCAAGAGTCTAATTTTATATGCCCTGCCAATGTCCTCATCTATTGCAGAATGTATAATTATCTATTTGTTTTGGACTATATGTTAC AAAAATTTAAAACATAAGATCCTCTCTCTATATTTCATTATTGGTGAACCCACATTGTGCTGTGTTTTGTGATATTTTATCATTTTCTAGATTCTTATGTGGATCTAATAACGACCACTTGAACCCAG TTTCACAGAATCCTTATTTTTCTGTTCAAATTAGGAATTAGGGACATGGATGAAATTGGAAATCTTCATTCTCAGTAAACTATCGCAAGGACAAAAAACCAAACACCACATGTTCTCACTCATAGATA GGAATTGAACAATGAGAACACATGGAGACAGGAAGGGGAACATCACACTCTAGGGACTGTTGTGGGGTGAGGGGAGGGGTGAGGGATAGCATTAGGAGATATACCTGATGCTAAATGACGAGTTAGTG GGTGCAGCACACCAGCATGGCACATGTATACGTATGTAACTAACCTGCACATCGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAAAATAAAAAAAAAGGAATTAGGCAAAA
hide sequence
|
RefSeq Acc Id: |
NM_001386928 ⟹ NP_001373857 |
RefSeq Status: |
VALIDATED |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38 | 14 | 64,914,455 - 64,935,368 (+) | NCBI | T2T-CHM13v2.0 | 14 | 59,119,323 - 59,140,237 (+) | NCBI |
|
Sequence: |
CCCGGAAGCGTTGGAGGACATTCCCTGTTGACTGCGTCGCGATGTGTGGCGACTGTGTGGAGAAGGAATATCCCAACCGGGGTAATACCTGCCTGGAGAATGGATCTTTCTTACTGAACTTTACAGGC TGTGCAGTGTGCAGTAAGCGGGATTTTATGCTGATCACAAACAAATCCTTGAAAGAAGAAGATGGAGAAGAAATAGTTACCTATGATCATTTGTGTAAGAATTGTCATCATGTAATAGCCAGACATGA GTATACATTCAGTATCATGGATGAATTTCAGGAGTATACCATGCTGTGTCTGTTATGCGGCAAAGCCGAAGATACTATCAGTATTCTCCCTGATGACCCCCGACAAATGACTCTCTTATTCTAAGGAT CCTTCTACAGATCTGTTATAACTATATTGTGTTGGTTTACAATACAGCAAGCCTGATGGTTTGTCTTATTTCATTCATACTGAAAATTCTTTGCATATTTTTTTTCTGCTTAGACTTACTTATTCTTT GAGGAAAAAAGGTAATGTAGGAGCTCATTGTTCTCTAGAGCTGAGCTCTTCTGCTAAAGTTCAAAGTTCACATCAGTGTAGCCAGAGTGAAGCATCTTTGTTAGCAGTTATGTGGTCAGAAAACAACT AGAATGGGAGCACACCTGGTGCCCAGATTTTGGTTTCCAATAAAAGGAACCAGGACTCCTTAGAAAATGAACTGATTCTAGAACTGGGATATGAACTGTACAAGATGAGCCTAGAGTATCTTGTGCCA CAGAAAAATGAAGTACTGAAATTAAAAAAAAAAAATCATAGTGATTGGGAGTATGTCAGCATGATCGAACTGAAGGATCTCTGAAAGGCCACAGCTGGAGCAATTTGAGTAACAAAATAAAGTAGTAT TGGGTTATAACCCAAACTATATAATAAATATTTACAAGCCCAAACTAATATAAATGATTGAATGGGAACAAATCTCTTGTGCAGAAGAATTTCAAATAATTTATGTAGATACTCCCCACTTAGTGGGC TCTGCATAGTGACTTCCTTGCAGAGTATAATATGGAAAGGGGGGAAAAGAGTAACTTTACAGTGGAGAAATCTGACAGACACCAGCTCAGCCAGGTGATTGAGGTTAACATCATCCATGATAAGCCCT TTTGATAGCATGTATCCTTGATAGCATCACATCATACAGAATGTGATAAGAATGGCACTTTACCTCTGTGGTCCTCCTCCCCAGAACTCAGAACCCAAGTCTGATCAGGAGAAAAACATCACACAAAT TCCAATTGAGAAGCATTCTTTAAAATACCTAACCAGTACTTCTCAAAACTATCAAGGCCATAAAAAACAAGGAAAATCTGAGACATGGTCACAGCCAAGAGGAGCCTGAGAAGACATGACTGCTAGAT GTAATGTGGTATCCTACATGGAATTATATACCACGAAAAGAAAAAAAGGTCATTTGGTAGAAACTAGGGAAATCTGAATACAGTGTGGACTTCAGTTAATATAAATGAGAAAATGGTTTCATTGGCTT TAAAGGGATTTTAGAATATCTTACTTTGCATAGTTTCATGAGCACTGGCCAGGAGGTTATAAACTGGCATTTAGGCCTCTCTGCCATTTAGTAGCAGTATAGTCATTAAGCAAAGCATTACTCTGGAC TTTATTGTCCTGTTTCTATCAAATTGGACTAACAAAAATTGATATAATACATTCATCACAGTATTGTTAGGAGATTTAAATGAATTAGTGAATGTAAGATACTTTAGAAAGCATGTAAAGTACTAGAA ACAATGAGGTGGCTTCAATTAGTGCTCATTCTGAGACCTAAATTTAAAGGGTCAGGCATTAGAAACAAAAGTGTTTCTTCATATCTAGGAGATTTGGAAATTCTGAACTAAGGTCTTATAAGAACAAG AAATGAGCAAAGTGTTCATTGTAGATACTAGGGAAAAGCTTTGTTGAATAACAGTAATGATGATAATATCTGAGCTTTATTAAGTACTTACTACATGCTAAGAGCTTTTTAAGCACTTATTTAATCCT CATTAACAAATTCATAAGGTAGGTGCTATTGATAGTTTAGCCATAACCAGATATGGCTTGTTATTTGTAAGTTATCATGAAAAGGTTTATATTCACTATTCTTTATTTCAGTGTAGCACTTTTAGAGC CAAAAAAACTCAGGCACAAAGAAGTTAAATAACTTGCCGGGTGCGGTGGCTCACCCCTGTAATCCCAGCACTTTGGGAGGCCAAAGCAGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCGGGC CAACATGGTGCAACCTCGTCTTTACTAAAAATACAAAAACAAAAATTAGCCAGGGGTGGTGGTATGCACCTGCAGTCCCAGCAACATGGGAGGCTGAACAGGAGAATCGCTTGAACCCGCGACAGGGA GGTTGTGATGAGCCAAGGTCATGCCACTGCACTCCAGCCTGGGAGACAGAGCAAGACTCCATCTCAAAAACAAAAACAAAACAAAACAACAACAAAAAAAGAAGTTAAATAACTTGTTTAAGATCACA CAGCTAGTGCAGTTACCCCCTCTCAGTAATTATGTTTGGCAAATATGAAATACAAGGATCTGGCAAGGTTAGGAAGAGGTTAAGAATATCAGTGACAGTACTCTGAGGCATCTGGGCATGTCAGATGA AGATTTATTATTCAGAAAAGTTAAGTCAGCTGTTGCAGGGATCAGTTGTTTTATTCCTGGAAAATGTTTTTCATTTTGCTGCAAATCTATATCTGACCTGCTGAGGAAATCGTTTGGTGAAATGAATC CAGAAAGCAGAGAAAATGCTTCATTACTTTAAATAGCAGCATTAAGCCCATTATAGCCTCTGAATTGTCCCTTCCTTGAGTTTGCTAATGCTTCCAACTTAGTCATTTGAAGCCCAAGAGTCTAATTT TATATGCCCTGCCAATGTCCTCATCTATTGCAGAATGTATAATTATCTATTTGTTTTGGACTATATGTTACAAAAATTTAAAACATAAGATCCTCTCTCTATATTTCATTATTGGTGAACCCACATTG TGCTGTGTTTTGTGATATTTTATCATTTTCTAGATTCTTATGTGGATCTAATAACGACCACTTGAACCCAGTTTCACAGAATCCTTATTTTTCTGTTCAAATTAGGAATTAGGGACATGGATGAAATT GGAAATCTTCATTCTCAGTAAACTATCGCAAGGACAAAAAACCAAACACCACATGTTCTCACTCATAGATAGGAATTGAACAATGAGAACACATGGAGACAGGAAGGGGAACATCACACTCTAGGGAC TGTTGTGGGGTGAGGGGAGGGGTGAGGGATAGCATTAGGAGATATACCTGATGCTAAATGACGAGTTAGTGGGTGCAGCACACCAGCATGGCACATGTATACGTATGTAACTAACCTGCACATCGTGC ACATGTACCCTAAAACTTAAAGTATAATAATAATAAAATAAAAAAAAAGGAATTAGGCAAAA
hide sequence
|
RefSeq Acc Id: |
NM_145165 ⟹ NP_660148 |
RefSeq Status: |
VALIDATED |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38 | 14 | 64,914,455 - 64,935,368 (+) | NCBI | GRCh37 | 14 | 65,381,079 - 65,410,635 (+) | NCBI | Build 36 | 14 | 64,450,893 - 64,471,666 (+) | NCBI Archive | Celera | 14 | 45,435,725 - 45,456,498 (+) | RGD | HuRef | 14 | 45,550,703 - 45,571,710 (+) | ENTREZGENE | CHM1_1 | 14 | 65,319,246 - 65,340,255 (+) | NCBI | T2T-CHM13v2.0 | 14 | 59,119,323 - 59,140,237 (+) | NCBI |
|
Sequence: |
CCCGGAAGCGTTGGAGGACATTCCCTGTTGACTGCGTCGCGATGTGTGGCGACTGTGTGGAGAA GGAATATCCCAACCGGGGTAATACCTGCCTGGAGAATGGATCTTTCTTACTGAACTTTACAGGCTGTGCAGTGTGCAGTAAGCGGGATTTTATGCTGATCACAAACAAATCCTTGAAAGAAGAAGATG GAGAAGAAATAGTTACCTATGATCCAGATTTGTGTAAGAATTGTCATCATGTAATAGCCAGACATGAGTATACATTCAGTATCATGGATGAATTTCAGGAGTATACCATGCTGTGTCTGTTATGCGGC AAAGCCGAAGATACTATCAGTATTCTCCCTGATGACCCCCGACAAATGACTCTCTTATTCTAAGGATCCTTCTACAGATCTGTTATAACTATATTGTGTTGGTTTACAATACAGCAAGCCTGATGGTT TGTCTTATTTCATTCATACTGAAAATTCTTTGCATATTTTTTTTCTGCTTAGACTTACTTATTCTTTGAGGAAAAAAGGTAATGTAGGAGCTCATTGTTCTCTAGAGCTGAGCTCTTCTGCTAAAGTT CAAAGTTCACATCAGTGTAGCCAGAGTGAAGCATCTTTGTTAGCAGTTATGTGGTCAGAAAACAACTAGAATGGGAGCACACCTGGTGCCCAGATTTTGGTTTCCAATAAAAGGAACCAGGACTCCTT AGAAAATGAACTGATTCTAGAACTGGGATATGAACTGTACAAGATGAGCCTAGAGTATCTTGTGCCACAGAAAAATGAAGTACTGAAATTAAAAAAAAAAAATCATAGTGATTGGGAGTATGTCAGCA TGATCGAACTGAAGGATCTCTGAAAGGCCACAGCTGGAGCAATTTGAGTAACAAAATAAAGTAGTATTGGGTTATAACCCAAACTATATAATAAATATTTACAAGCCCAAACTAATATAAATGATTGA ATGGGAACAAATCTCTTGTGCAGAAGAATTTCAAATAATTTATGTAGATACTCCCCACTTAGTGGGCTCTGCATAGTGACTTCCTTGCAGAGTATAATATGGAAAGGGGGGAAAAGAGTAACTTTACA GTGGAGAAATCTGACAGACACCAGCTCAGCCAGGTGATTGAGGTTAACATCATCCATGATAAGCCCTTTTGATAGCATGTATCCTTGATAGCATCACATCATACAGAATGTGATAAGAATGGCACTTT ACCTCTGTGGTCCTCCTCCCCAGAACTCAGAACCCAAGTCTGATCAGGAGAAAAACATCACACAAATTCCAATTGAGAAGCATTCTTTAAAATACCTAACCAGTACTTCTCAAAACTATCAAGGCCAT AAAAAACAAGGAAAATCTGAGACATGGTCACAGCCAAGAGGAGCCTGAGAAGACATGACTGCTAGATGTAATGTGGTATCCTACATGGAATTATATACCACGAAAAGAAAAAAAGGTCATTTGGTAGA AACTAGGGAAATCTGAATACAGTGTGGACTTCAGTTAATATAAATGAGAAAATGGTTTCATTGGCTTTAAAGGGATTTTAGAATATCTTACTTTGCATAGTTTCATGAGCACTGGCCAGGAGGTTATA AACTGGCATTTAGGCCTCTCTGCCATTTAGTAGCAGTATAGTCATTAAGCAAAGCATTACTCTGGACTTTATTGTCCTGTTTCTATCAAATTGGACTAACAAAAATTGATATAATACATTCATCACAG TATTGTTAGGAGATTTAAATGAATTAGTGAATGTAAGATACTTTAGAAAGCATGTAAAGTACTAGAAACAATGAGGTGGCTTCAATTAGTGCTCATTCTGAGACCTAAATTTAAAGGGTCAGGCATTA GAAACAAAAGTGTTTCTTCATATCTAGGAGATTTGGAAATTCTGAACTAAGGTCTTATAAGAACAAGAAATGAGCAAAGTGTTCATTGTAGATACTAGGGAAAAGCTTTGTTGAATAACAGTAATGAT GATAATATCTGAGCTTTATTAAGTACTTACTACATGCTAAGAGCTTTTTAAGCACTTATTTAATCCTCATTAACAAATTCATAAGGTAGGTGCTATTGATAGTTTAGCCATAACCAGATATGGCTTGT TATTTGTAAGTTATCATGAAAAGGTTTATATTCACTATTCTTTATTTCAGTGTAGCACTTTTAGAGCCAAAAAAACTCAGGCACAAAGAAGTTAAATAACTTGCCGGGTGCGGTGGCTCACCCCTGTA ATCCCAGCACTTTGGGAGGCCAAAGCAGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCGGGCCAACATGGTGCAACCTCGTCTTTACTAAAAATACAAAAACAAAAATTAGCCAGGGGTGGTG GTATGCACCTGCAGTCCCAGCAACATGGGAGGCTGAACAGGAGAATCGCTTGAACCCGCGACAGGGAGGTTGTGATGAGCCAAGGTCATGCCACTGCACTCCAGCCTGGGAGACAGAGCAAGACTCCA TCTCAAAAACAAAAACAAAACAAAACAACAACAAAAAAAGAAGTTAAATAACTTGTTTAAGATCACACAGCTAGTGCAGTTACCCCCTCTCAGTAATTATGTTTGGCAAATATGAAATACAAGGATCT GGCAAGGTTAGGAAGAGGTTAAGAATATCAGTGACAGTACTCTGAGGCATCTGGGCATGTCAGATGAAGATTTATTATTCAGAAAAGTTAAGTCAGCTGTTGCAGGGATCAGTTGTTTTATTCCTGGA AAATGTTTTTCATTTTGCTGCAAATCTATATCTGACCTGCTGAGGAAATCGTTTGGTGAAATGAATCCAGAAAGCAGAGAAAATGCTTCATTACTTTAAATAGCAGCATTAAGCCCATTATAGCCTCT GAATTGTCCCTTCCTTGAGTTTGCTAATGCTTCCAACTTAGTCATTTGAAGCCCAAGAGTCTAATTTTATATGCCCTGCCAATGTCCTCATCTATTGCAGAATGTATAATTATCTATTTGTTTTGGAC TATATGTTACAAAAATTTAAAACATAAGATCCTCTCTCTATATTTCATTATTGGTGAACCCACATTGTGCTGTGTTTTGTGATATTTTATCATTTTCTAGATTCTTATGTGGATCTAATAACGACCAC TTGAACCCAGTTTCACAGAATCCTTATTTTTCTGTTCAAATTAGGAATTAGGGACATGGATGAAATTGGAAATCTTCATTCTCAGTAAACTATCGCAAGGACAAAAAACCAAACACCACATGTTCTCA CTCATAGATAGGAATTGAACAATGAGAACACATGGAGACAGGAAGGGGAACATCACACTCTAGGGACTGTTGTGGGGTGAGGGGAGGGGTGAGGGATAGCATTAGGAGATATACCTGATGCTAAATGA CGAGTTAGTGGGTGCAGCACACCAGCATGGCACATGTATACGTATGTAACTAACCTGCACATCGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAAAATAAAAAAAAAGGAATTAGGCAAA A
hide sequence
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RefSeq Acc Id: |
NP_660148 ⟸ NM_145165 |
- Peptide Label: |
isoform 1 |
- Sequence: |
MRQPYLSSREVSSSRKRWRTFPVDCVAMCGDCVEKEYPNRGNTCLENGSFLLNFTGCAVCSKRDFMLITNKSLKEEDGEEIVTYDPDLCKNCHHVIARHEYTFSIMDEFQEYTMLCLLCGKAEDTISI LPDDPRQMTLLF
hide sequence
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RefSeq Acc Id: |
NP_001190993 ⟸ NM_001204064 |
- Peptide Label: |
isoform 3 |
- Sequence: |
MRQPYLSSREVSSSRKRWRTFPVDCVAMCGDCVEKEYPNRGNTCLENGSFLLNFTGCAVCSKRD FMLITNKSLKEEDGEEIVTYDRVYHAVSVMRQSRRYYQYSP
hide sequence
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Ensembl Acc Id: |
ENSP00000449184 ⟸ ENST00000547625 |
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Ensembl Acc Id: |
ENSP00000450165 ⟸ ENST00000548752 |
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Ensembl Acc Id: |
ENSP00000448050 ⟸ ENST00000549115 |
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Ensembl Acc Id: |
ENSP00000446610 ⟸ ENST00000551093 |
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Ensembl Acc Id: |
ENSP00000446697 ⟸ ENST00000551947 |
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Ensembl Acc Id: |
ENSP00000450144 ⟸ ENST00000552002 |
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Ensembl Acc Id: |
ENSP00000475473 ⟸ ENST00000607599 |
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RefSeq Acc Id: |
NP_001373857 ⟸ NM_001386928 |
- Peptide Label: |
isoform 2 |
- UniProtKB: |
Q8WUH1 (UniProtKB/Swiss-Prot), G3V214 (UniProtKB/Swiss-Prot), G3V1X3 (UniProtKB/Swiss-Prot), B3KQ81 (UniProtKB/Swiss-Prot), A0A0C4DGJ7 (UniProtKB/Swiss-Prot), Q9H3K7 (UniProtKB/Swiss-Prot) |
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RGD ID: | 6791374 |
Promoter ID: | HG_KWN:19591 |
Type: | CpG-Island |
SO ACC ID: | SO:0000170 |
Source: | MPROMDB |
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4 |
Transcripts: | NM_145165, UC001XHW.1, UC010AQJ.1 |
Position: | Human Assembly | Chr | Position (strand) | Source |
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Build 36 | 14 | 64,450,651 - 64,451,151 (+) | MPROMDB |
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RGD ID: | 7227887 |
Promoter ID: | EPDNEW_H19690 |
Type: | initiation region |
Name: | CHURC1_1 |
Description: | churchill domain containing 1 |
SO ACC ID: | SO:0000170 |
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) |
Alternative Promoters: | null; see alsoEPDNEW_H19692 |
Experiment Methods: | Single-end sequencing. |
Position: | Human Assembly | Chr | Position (strand) | Source |
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GRCh38 | 14 | 64,914,458 - 64,914,518 | EPDNEW |
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RGD ID: | 7227893 |
Promoter ID: | EPDNEW_H19692 |
Type: | initiation region |
Name: | CHURC1_2 |
Description: | churchill domain containing 1 |
SO ACC ID: | SO:0000170 |
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) |
Alternative Promoters: | null; see alsoEPDNEW_H19690 |
Experiment Methods: | Single-end sequencing.; Paired-end sequencing. |
Position: | Human Assembly | Chr | Position (strand) | Source |
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GRCh38 | 14 | 64,923,991 - 64,924,051 | EPDNEW |
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