USP8 (ubiquitin specific peptidase 8) - Rat Genome Database

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Gene: USP8 (ubiquitin specific peptidase 8) Homo sapiens
Analyze
Symbol: USP8
Name: ubiquitin specific peptidase 8
RGD ID: 1312730
HGNC Page HGNC:12631
Description: Enables K48-linked deubiquitinase activity; K63-linked deubiquitinase activity; and cysteine-type deubiquitinase activity. Involved in several processes, including positive regulation of canonical Wnt signaling pathway; protein deubiquitination; and regulation of protein metabolic process. Acts upstream of or within mitotic cytokinesis and protein deubiquitination. Located in early endosome and midbody. Is active in cytosol. Implicated in ACTH-secreting pituitary adenoma.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: deubiquitinating enzyme 8; FLJ34456; hUBPy; HumORF8; KIAA0055; MGC129718; PITA4; SPG59; ubiquitin carboxyl-terminal hydrolase 8; ubiquitin isopeptidase Y; ubiquitin specific protease 8; ubiquitin thioesterase 8; ubiquitin thiolesterase 8; ubiquitin-specific-processing protease 8; UBPY
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: USP8P1   USP8P2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381550,424,405 - 50,514,421 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1550,424,380 - 50,514,421 (+)EnsemblGRCh38hg38GRCh38
GRCh371550,716,602 - 50,806,618 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361548,503,871 - 48,579,265 (+)NCBINCBI36Build 36hg18NCBI36
Build 341548,503,870 - 48,579,263NCBI
Celera1527,609,144 - 27,685,855 (+)NCBICelera
Cytogenetic Map15q21.2NCBI
HuRef1527,547,372 - 27,623,683 (+)NCBIHuRef
CHM1_11550,834,671 - 50,911,286 (+)NCBICHM1_1
T2T-CHM13v2.01548,232,513 - 48,322,500 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
USP8HumanACTH-secreting pituitary adenoma  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: USP8-related conditionClinVarPMID:25741868 and PMID:28492532
USP8HumanACTH-secreting pituitary adenoma  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: USP8-related conditionClinVarPMID:28492532
USP8HumanBloom syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Bloom syndromeClinVarPMID:28492532
USP8Humancolorectal cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Familial colorectal cancerClinVarPMID:28492532
USP8Humanhereditary spastic paraplegia  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary spastic paraplegiaClinVarPMID:17576681 more ...
USP8Humanhereditary spastic paraplegia  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
USP8Humanhereditary spastic paraplegia  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Hereditary spastic paraplegiaClinVarPMID:25741868 and PMID:28492532
USP8Humanhereditary spastic paraplegia 59  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive spastic paraplegia type 59ClinVarPMID:25741868 and PMID:28492532
USP8Humanpituitary-dependent Cushing's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Pituitary dependent hypercortisolismClinVar 
USP8Humanpituitary-dependent Cushing's disease  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Pituitary dependent hypercortisolismClinVarPMID:25675982 and PMID:25942478
USP8Humanpituitary-dependent Cushing's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Pituitary dependent hypercortisolismClinVarPMID:25741868 and PMID:28492532
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Original Reference(s)
USP8HumanACTH-secreting pituitary adenoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:25485838
USP8Humanesophagus squamous cell carcinoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:35022897
USP8Humanpituitary-dependent Cushing's disease  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:25485838
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Original Reference(s)
USP8HumanACTH-secreting pituitary adenoma  IAGP 7240710 OMIM 

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Original Reference(s)
USP8Human(+)-schisandrin B multiple interactionsISOUsp8 (Rattus norvegicus)6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of USP8 mRNA]CTDPMID:31150632
USP8Human1,2-dimethylhydrazine decreases expressionISOUsp8 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of USP8 mRNACTDPMID:22206623
USP8Human17alpha-ethynylestradiol affects expressionISOUsp8 (Mus musculus)6480464Ethinyl Estradiol affects the expression of USP8 mRNACTDPMID:17555576
USP8Human17beta-estradiol decreases expressionISOUsp8 (Mus musculus)6480464Estradiol results in decreased expression of USP8 mRNACTDPMID:39298647
USP8Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOUsp8 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of USP8 mRNACTDPMID:21570461
USP8Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOUsp8 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of USP8 mRNACTDPMID:34747641
USP8Human2,4,6-trinitrobenzenesulfonic acid decreases expressionISOUsp8 (Rattus norvegicus)6480464Trinitrobenzenesulfonic Acid results in decreased expression of USP8 mRNACTDPMID:23537331
USP8Human2-hydroxypropanoic acid decreases expressionEXP 6480464Lactic Acid results in decreased expression of USP8 mRNACTDPMID:30851411
USP8Human3-chloropropane-1,2-diol increases expressionISOUsp8 (Rattus norvegicus)6480464alpha-Chlorohydrin results in increased expression of USP8 proteinCTDPMID:34915118
USP8Human3-isobutyl-1-methyl-7H-xanthine multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of USP8 mRNACTDPMID:28628672
USP8HumanAroclor 1254 decreases expressionISOUsp8 (Mus musculus)6480464Chlorodiphenyl (54% Chlorine) results in decreased expression of USP8 mRNACTDPMID:23650126
USP8Humanbafilomycin A1 multiple interactionsEXP 6480464[Cysteine Proteinase Inhibitors results in decreased activity of USP8 protein] promotes the reaction [bafilomycin A1 results in increased cleavage of PARP1 protein] and bafilomycin A1 promotes the reaction [[Cysteine Proteinase Inhibitors results in decreased activity of USP8 protein] which results in increased cleavage of PARP1 protein]CTDPMID:35022897
USP8Humanbenzo[a]pyrene increases expressionEXP 6480464Benzo(a)pyrene results in increased expression of USP8 mRNACTDPMID:17879257
USP8Humanbis(2-ethylhexyl) phthalate decreases expressionISOUsp8 (Mus musculus)6480464Diethylhexyl Phthalate results in decreased expression of USP8 mRNACTDPMID:33754040
USP8Humanbisphenol A increases expressionISOUsp8 (Rattus norvegicus)6480464bisphenol A results in increased expression of USP8 mRNACTDPMID:25181051 more ...
USP8Humanbisphenol A decreases expressionISOUsp8 (Mus musculus)6480464bisphenol A results in decreased expression of USP8 mRNACTDPMID:33221593
USP8Humanbisphenol A affects methylationISOUsp8 (Mus musculus)6480464bisphenol A affects the methylation of USP8 promoterCTDPMID:27334623
USP8Humanbisphenol F multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of USP8 mRNACTDPMID:28628672
USP8Humancaffeine decreases phosphorylationEXP 6480464Caffeine results in decreased phosphorylation of USP8 proteinCTDPMID:35688186
USP8Humanchloroquine multiple interactionsEXP 6480464[Cysteine Proteinase Inhibitors results in decreased activity of USP8 protein] promotes the reaction [Chloroquine results in increased cleavage of PARP1 protein] and Chloroquine promotes the reaction [[Cysteine Proteinase Inhibitors results in decreased activity of USP8 protein] which results in increased cleavage of PARP1 protein]CTDPMID:35022897

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Biological Process
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Original Reference(s)
USP8Humancellular response to dexamethasone stimulus  ISOUsp8 (Rattus norvegicus)9068941 RGDPMID:19527720 and REF_RGD_ID:13208949
USP8Humancellular response to dexamethasone stimulus involved_inIEAUniProtKB:A6HPZ0 more ...150520179 EnsemblGO_REF:0000107
USP8Humancellular response to nerve growth factor stimulus involved_inIEAUniProtKB:A6HPZ0 more ...150520179 EnsemblGO_REF:0000107
USP8Humancellular response to nerve growth factor stimulus  ISOUsp8 (Rattus norvegicus)9068941 RGDPMID:25662281 and REF_RGD_ID:11053004
USP8Humanendosome organization involved_inIBAMGI:1934029 and PANTHER:PTN008578257150520179 GO_CentralGO_REF:0000033
USP8Humanendosome organization involved_inIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
USP8Humanmitotic cytokinesis acts_upstream_of_or_withinIMP 150520179 PMID:18388320MGIPMID:18388320
USP8Humannegative regulation of lysosomal protein catabolic process involved_inIMP 150520179 PMID:27444016FlyBasePMID:27444016
USP8Humanpositive regulation of amyloid fibril formation involved_inIMP 150520179 PMID:27444016FlyBasePMID:27444016
USP8Humanpositive regulation of canonical Wnt signaling pathway involved_inIMP 150520179 PMID:20495530FlyBasePMID:20495530
USP8Humanprotein deubiquitination involved_inIMP 150520179 PMID:27302062UniProtPMID:27302062
USP8Humanprotein deubiquitination involved_inIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
USP8Humanprotein deubiquitination involved_inIEAARBA:ARBA00027879150520179 UniProtGO_REF:0000117
USP8Humanprotein deubiquitination involved_inIEAInterPro:IPR001394150520179 InterProGO_REF:0000002
USP8Humanprotein deubiquitination acts_upstream_of_or_withinIMP 150520179 PMID:18388320MGIPMID:18388320
USP8Humanprotein K48-linked deubiquitination involved_inIDA 150520179 PMID:16520378UniProtPMID:16520378
USP8Humanprotein K63-linked deubiquitination involved_inIDA 150520179 PMID:16520378UniProtPMID:16520378
USP8Humanproteolysis involved_inIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
USP8HumanRas protein signal transduction involved_inIBAMGI:1934029 and PANTHER:PTN008578257150520179 GO_CentralGO_REF:0000033
USP8HumanRas protein signal transduction acts_upstream_of_or_withinIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
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Cellular Component
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Original Reference(s)
USP8Humanacrosomal membrane located_inIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
USP8Humancytoplasm located_inIDA 150520179 PMID:18388320MGIPMID:18388320
USP8Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
USP8Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
USP8Humancytosol is_active_inIDA 150520179 PMID:16520378UniProtPMID:16520378
USP8Humancytosol located_inIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
USP8Humancytosol is_active_inIBAMGI:1934029 more ...150520179 GO_CentralGO_REF:0000033
USP8Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-1358791 more ...
USP8Humancytosol located_inIDA 150520179 PMID:27444016FlyBasePMID:27444016
USP8Humanearly endosome located_inIEAUniProtKB:A6HPZ0 more ...150520179 EnsemblGO_REF:0000107
USP8Humanearly endosome located_inIDA 150520179 PMID:16520378UniProtPMID:16520378
USP8Humanendosome located_inIEAUniProtKB-KW:KW-0967150520179 UniProtGO_REF:0000043
USP8Humanendosome membrane located_inIEAUniProtKB-SubCell:SL-0100150520179 UniProtGO_REF:0000044
USP8Humanendosome membrane located_inIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
USP8Humanglutamatergic synapse is_active_inIEAUniProtKB:A6HPZ0 more ...150520179 EnsemblGO_REF:0000107
USP8Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
USP8Humanmidbody located_inIDA 150520179 PMID:18388320MGIPMID:18388320
USP8Humanmidbody located_inIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
USP8Humanmidbody is_active_inIBAMGI:1934029 more ...150520179 GO_CentralGO_REF:0000033
USP8Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
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Molecular Function
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Original Reference(s)
USP8Humancadherin binding enablesHDA 150520179 PMID:25468996BHF-UCLPMID:25468996
USP8Humancysteine-type deubiquitinase activity enablesIEAInterPro:IPR001394 and InterPro:IPR018200150520179 InterProGO_REF:0000002
USP8Humancysteine-type deubiquitinase activity enablesIEAUniProtKB:Q80U87 and ensembl:ENSMUSP00000028841150520179 EnsemblGO_REF:0000107
USP8Humancysteine-type deubiquitinase activity enablesIBAMGI:1934029 more ...150520179 GO_CentralGO_REF:0000033
USP8Humancysteine-type deubiquitinase activity enablesIDA 150520179 PMID:16520378 more ...MGIPMID:16520378 more ...
USP8Humancysteine-type deubiquitinase activity enablesTAS 150520179 PMID:9628861ReactomePMID:9628861 more ...
USP8Humancysteine-type deubiquitinase activity enablesIEAEC:3.4.19.12150520179 UniProtGO_REF:0000003
USP8Humancysteine-type endopeptidase activity enablesTAS 150520179 PMID:9827704PINCPMID:9827704
USP8Humancysteine-type peptidase activity enablesIEAUniProtKB-KW:KW-0788150520179 UniProtGO_REF:0000043
USP8Humancysteine-type peptidase activity enablesIEAARBA:ARBA00027409150520179 UniProtGO_REF:0000117
USP8Humandeubiquitinase activity enablesIEAARBA:ARBA00026566150520179 UniProtGO_REF:0000117
USP8Humanhydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
USP8HumanK48-linked deubiquitinase activity enablesIDA 150520179 PMID:16520378UniProtPMID:16520378
USP8HumanK63-linked deubiquitinase activity enablesIDA 150520179 PMID:16520378UniProtPMID:16520378
USP8Humanpeptidase activity enablesIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
USP8Humanprotein binding enablesIPIUniProtKB:P63104150520179 PMID:15161933 more ...IntActPMID:15161933 more ...
USP8Humanprotein binding enablesIPIUniProtKB:P31947150520179 PMID:15778465IntActPMID:15778465
USP8Humanprotein binding enablesIPIUniProtKB:P31947 more ...150520179 PMID:36931259IntActPMID:36931259
USP8Humanprotein binding enablesIPIUniProtKB:Q7LBR1 more ...150520179 PMID:17711858 and PMID:19302785IntActPMID:17711858 and PMID:19302785
USP8Humanprotein binding enablesIPIUniProtKB:Q14596150520179 PMID:19427866IntActPMID:19427866
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RGD Manual Annotations


  
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Original Reference(s)
USP8Humanmitochondrial autophagy pathway   TAS 10401790 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
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Reference
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Original Reference(s)
USP8Humanendocytosis pathway  IEA 6907045 KEGGhsa:04144
1 to 20 of 105 rows
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Original Reference(s)
USP8HumanAbdominal obesity  IAGP 8699517 HPOORPHA:96253
USP8HumanAbdominal obesity  IAGP 8699517 HPOMIM:219090
USP8HumanAbnormal cerebellum morphology  IAGP 8699517 HPOORPHA:401795
USP8HumanAbnormal cerebral white matter morphology  IAGP 8699517 HPOORPHA:401795
USP8HumanAbnormal fear-induced behavior  IAGP 8699517 HPOMIM:219090
USP8HumanAbnormal libido  IAGP 8699517 HPOORPHA:96253
USP8HumanAbnormality of the cardiovascular system  IAGP 8699517 HPOORPHA:96253
USP8HumanAbnormality of the respiratory system  IAGP 8699517 HPOORPHA:96253
USP8HumanAcne  IAGP 8699517 HPOORPHA:96253
USP8HumanAdrenal hyperplasia  IAGP 8699517 HPOORPHA:96253
USP8HumanAlkalosis  IAGP 8699517 HPOMIM:219090
USP8HumanAmenorrhea  IAGP 8699517 HPOORPHA:96253
USP8HumanAtypical behavior  IAGP 8699517 HPOORPHA:96253
USP8HumanAutosomal dominant inheritance  IAGP 8699517 HPOMIM:219090
USP8HumanAutosomal recessive inheritance  IAGP 8699517 HPOMIM:219090
USP8HumanAvascular necrosis  IAGP 8699517 HPOORPHA:96253
USP8HumanBiconcave vertebral bodies  IAGP 8699517 HPOMIM:219090
USP8HumanBruising susceptibility  IAGP 8699517 HPOORPHA:96253
USP8HumanBruising susceptibility  IAGP 8699517 HPOMIM:219090
USP8HumanCapillary fragility  IAGP 8699517 HPOORPHA:96253
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#
Reference Title
Reference Citation
1. The three 'P's of mitophagy: PARKIN, PINK1, and post-translational modifications. Durcan TM and Fon EA, Genes Dev. 2015 May 15;29(10):989-99. doi: 10.1101/gad.262758.115.
2. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
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PMID:7584044   PMID:8889548   PMID:9582025   PMID:9628861   PMID:9827704   PMID:10982817   PMID:11500497   PMID:12176364   PMID:12477932   PMID:12773374   PMID:12838346   PMID:13129930  
PMID:14661020   PMID:14702039   PMID:15161933   PMID:15314180   PMID:15324660   PMID:15342353   PMID:15489334   PMID:15778465   PMID:16120644   PMID:16341674   PMID:16344560   PMID:16520378  
PMID:16771824   PMID:17035239   PMID:17121848   PMID:17210635   PMID:17353931   PMID:17711858   PMID:17720156   PMID:17979178   PMID:18029348   PMID:18329369   PMID:18388320   PMID:18728397  
PMID:19302785   PMID:19427866   PMID:19523899   PMID:19608861   PMID:19615732   PMID:19684015   PMID:20301682   PMID:20495530   PMID:20736164   PMID:20876529   PMID:21448666   PMID:21828287  
PMID:21873635   PMID:22118674   PMID:22195557   PMID:22253573   PMID:22626734   PMID:22779921   PMID:22841719   PMID:22863883   PMID:22939629   PMID:23153581   PMID:23287719   PMID:23297398  
PMID:23333852   PMID:23472066   PMID:23477725   PMID:23748694   PMID:23750007   PMID:24255178   PMID:24270891   PMID:24344018   PMID:24378640   PMID:24482476   PMID:24825905   PMID:24828152  
PMID:24894536   PMID:25170077   PMID:25216678   PMID:25468996   PMID:25485838   PMID:25527291   PMID:25675982   PMID:25700639   PMID:25733871   PMID:25853104   PMID:25863102   PMID:25921289  
PMID:25930709   PMID:25942478   PMID:26186194   PMID:26214742   PMID:26285834   PMID:26344197   PMID:26459808   PMID:26472760   PMID:26496610   PMID:26507658   PMID:26571504   PMID:26578638  
PMID:26683461   PMID:26701869   PMID:27173435   PMID:27302062   PMID:27321185   PMID:27444016   PMID:27501351   PMID:28505279   PMID:28514442   PMID:28515276   PMID:28544031   PMID:28710116  
PMID:28850717   PMID:28973533   PMID:28982703   PMID:29180353   PMID:29472535   PMID:29473952   PMID:29507755   PMID:29560723   PMID:29568061   PMID:29576527   PMID:29604273   PMID:29626091  
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USP8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381550,424,405 - 50,514,421 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1550,424,380 - 50,514,421 (+)EnsemblGRCh38hg38GRCh38
GRCh371550,716,602 - 50,806,618 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361548,503,871 - 48,579,265 (+)NCBINCBI36Build 36hg18NCBI36
Build 341548,503,870 - 48,579,263NCBI
Celera1527,609,144 - 27,685,855 (+)NCBICelera
Cytogenetic Map15q21.2NCBI
HuRef1527,547,372 - 27,623,683 (+)NCBIHuRef
CHM1_11550,834,671 - 50,911,286 (+)NCBICHM1_1
T2T-CHM13v2.01548,232,513 - 48,322,500 (+)NCBIT2T-CHM13v2.0
Usp8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392126,549,280 - 126,601,234 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2126,549,248 - 126,601,217 (+)EnsemblGRCm39 Ensembl
GRCm382126,707,201 - 126,759,314 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2126,707,328 - 126,759,297 (+)EnsemblGRCm38mm10GRCm38
MGSCv372126,533,099 - 126,585,033 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362126,398,804 - 126,450,738 (+)NCBIMGSCv36mm8
Celera2127,946,958 - 127,999,152 (+)NCBICelera
Cytogenetic Map2F1NCBI
cM Map261.76NCBI
Usp8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83134,413,832 - 134,463,040 (+)NCBIGRCr8
mRatBN7.23113,962,136 - 114,009,683 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3113,962,164 - 114,009,666 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3117,845,850 - 117,893,311 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03126,441,377 - 126,488,837 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03124,101,758 - 124,149,218 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03119,173,818 - 119,222,499 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3119,173,818 - 119,222,484 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03125,699,400 - 125,747,055 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43114,237,065 - 114,284,543 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13114,103,490 - 114,189,451 (+)NCBI
Celera3112,804,623 - 112,852,132 (+)NCBICelera
Cytogenetic Map3q36NCBI
Usp8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554093,840,007 - 3,891,284 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554093,839,308 - 3,903,595 (-)NCBIChiLan1.0ChiLan1.0
USP8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21639,669,333 - 39,746,278 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11543,850,502 - 43,939,848 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01529,374,945 - 29,451,235 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11547,699,282 - 47,790,624 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1547,713,997 - 47,790,624 (+)Ensemblpanpan1.1panPan2
USP8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13016,341,970 - 16,408,246 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3016,342,009 - 16,408,012 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3016,268,046 - 16,334,339 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03016,485,884 - 16,552,179 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3016,485,928 - 16,552,172 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13016,408,382 - 16,474,666 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03016,525,850 - 16,592,342 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03016,632,281 - 16,698,545 (+)NCBIUU_Cfam_GSD_1.0
Usp8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864094,615,145 - 94,673,337 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647112,463,120 - 12,520,674 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647112,463,189 - 12,524,148 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
USP8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1121,306,032 - 121,413,223 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11121,306,031 - 121,376,154 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21134,747,956 - 134,815,830 (-)NCBISscrofa10.2Sscrofa10.2susScr3
USP8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12632,829,627 - 32,906,493 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2632,829,523 - 32,866,073 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048108,247,584 - 108,324,662 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Usp8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247319,613,227 - 9,679,404 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247319,615,963 - 9,678,969 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in USP8
167 total Variants

1 to 10 of 211 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_005154.5(USP8):c.1328A>G (p.Asp443Gly) single nucleotide variant Hereditary spastic paraplegia [RCV000542854]|not provided [RCV004715256] Chr15:50481590 [GRCh38]
Chr15:50481590..50481591 [GRCh38]
Chr15:50773787 [GRCh37]
Chr15:50773787..50773788 [GRCh37]
Chr15:15q21.2
benign
NM_005154.5(USP8):c.2658+5_2658+8dup duplication Hereditary spastic paraplegia [RCV000550889]|not provided [RCV001356127] Chr15:50494282..50494283 [GRCh38]
Chr15:50786479..50786480 [GRCh37]
Chr15:15q21.2
likely benign|uncertain significance
NM_005154.5(USP8):c.928C>A (p.Gln310Lys) single nucleotide variant not provided [RCV000087331] Chr15:50476927 [GRCh38]
Chr15:50769124 [GRCh37]
Chr15:15q21.2
uncertain significance
GRCh38/hg38 15q21.1-21.3(chr15:46042302-54195828)x1 copy number loss See cases [RCV000051619] Chr15:46042302..54195828 [GRCh38]
Chr15:46334500..54488025 [GRCh37]
Chr15:44121792..52275317 [NCBI36]
Chr15:15q21.1-21.3
pathogenic
GRCh38/hg38 15q21.1-21.3(chr15:48695331-53923002)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051620]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051620]|See cases [RCV000051620] Chr15:48695331..53923002 [GRCh38]
Chr15:48987528..54215199 [GRCh37]
Chr15:46774820..52002491 [NCBI36]
Chr15:15q21.1-21.3
pathogenic
NM_001128610.2(USP8):c.687-1732G>T single nucleotide variant Lung cancer [RCV000099539] Chr15:50469901 [GRCh38]
Chr15:50762098 [GRCh37]
Chr15:15q21.2
uncertain significance
NM_005154.5(USP8):c.3292T>G (p.Ser1098Ala) single nucleotide variant Hereditary spastic paraplegia [RCV001348238] Chr15:50499023 [GRCh38]
Chr15:50791220 [GRCh37]
Chr15:15q21.2
uncertain significance
NM_005154.5(USP8):c.2152TCC[1] (p.Ser719del) microsatellite Pituitary dependent hypercortisolism [RCV000149416] Chr15:50490442..50490444 [GRCh38]
Chr15:50782639..50782641 [GRCh37]
Chr15:15q21.2
pathogenic
NM_005154.5(USP8):c.2152T>C (p.Ser718Pro) single nucleotide variant Pituitary dependent hypercortisolism [RCV000149417] Chr15:50490443 [GRCh38]
Chr15:50782640 [GRCh37]
Chr15:15q21.2
pathogenic
NM_005154.5(USP8):c.2153C>G (p.Ser718Cys) single nucleotide variant Pituitary dependent hypercortisolism [RCV000149418] Chr15:50490444 [GRCh38]
Chr15:50782641 [GRCh37]
Chr15:15q21.2
pathogenic
1 to 10 of 211 rows

Predicted Target Of
Summary Value
Count of predictions:3547
Count of miRNA genes:952
Interacting mature miRNAs:1157
Transcripts:ENST00000307179, ENST00000396444, ENST00000419830, ENST00000425032, ENST00000433963, ENST00000558091, ENST00000558892, ENST00000559242, ENST00000559329, ENST00000560297, ENST00000560379, ENST00000560527, ENST00000560730, ENST00000560885, ENST00000560954, ENST00000560982, ENST00000561206, ENST00000561211, ENST00000561330
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 50 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597610390GWAS1667250_Hmonocyte count QTL GWAS1667250 (human)4e-11monocyte quantity (VT:0000223)blood monocyte count (CMO:0000032)155047805750478058Human
597341843GWAS1437917_Hosteoarthritis QTL GWAS1437917 (human)6e-08osteoarthritis155048736250487363Human
597027358GWAS1123432_Hsystolic blood pressure QTL GWAS1123432 (human)2e-08systolic blood pressuresystolic blood pressure (CMO:0000004)155046871350468714Human
597460625GWAS1556699_Hosteoarthritis, knee QTL GWAS1556699 (human)0.000005osteoarthritis, hip, osteoarthritis, knee155049522850495229Human
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
597339914GWAS1435988_Hosteoarthritis QTL GWAS1435988 (human)1e-10osteoarthritis155048736250487363Human
597360777GWAS1456851_Hneutrophil count, eosinophil count QTL GWAS1456851 (human)6e-12eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)155050789850507899Human
597176843GWAS1272917_Hprotein measurement QTL GWAS1272917 (human)1e-16protein measurement155049281950492820Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
597361282GWAS1457356_Hgranulocyte count QTL GWAS1457356 (human)2e-11granulocyte count155050789850507899Human

1 to 10 of 50 rows
D15S1200  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371550,791,702 - 50,791,951UniSTSGRCh37
Build 361548,578,994 - 48,579,243RGDNCBI36
Celera1527,684,281 - 27,684,529RGD
Cytogenetic Map15q21.2UniSTS
HuRef1527,622,109 - 27,622,357UniSTS
GeneMap99-GB4 RH Map15177.97UniSTS
Whitehead-RH Map15141.9UniSTS
Whitehead-YAC Contig Map15 UniSTS
NCBI RH Map15218.3UniSTS
D15S712E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371550,791,747 - 50,791,845UniSTSGRCh37
Build 361548,579,039 - 48,579,137RGDNCBI36
Celera1527,684,326 - 27,684,423RGD
Cytogenetic Map15q21.2UniSTS
HuRef1527,622,154 - 27,622,251UniSTS
GeneMap99-GB4 RH Map15177.42UniSTS
RH104427  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371550,786,316 - 50,786,469UniSTSGRCh37
GRCh37631,245,679 - 31,245,829UniSTSGRCh37
Build 36631,353,658 - 31,353,808RGDNCBI36
Celera632,844,349 - 32,844,499RGD
Celera1527,678,896 - 27,679,049UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map6p21.33UniSTS
HuRef1527,616,782 - 27,616,935UniSTS
HuRef631,046,299 - 31,046,449UniSTS
GeneMap99-GB4 RH Map15178.53UniSTS
G07414  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371550,791,499 - 50,791,839UniSTSGRCh37
GRCh37631,246,745 - 31,247,082UniSTSGRCh37
Build 36631,354,724 - 31,355,061RGDNCBI36
Celera1527,684,079 - 27,684,417UniSTS
Celera632,845,415 - 32,845,752RGD
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map15q21.2UniSTS
HuRef1527,621,907 - 27,622,245UniSTS
HuRef631,047,365 - 31,047,695UniSTS
RH25289  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37631,245,553 - 31,245,676UniSTSGRCh37
GRCh371550,785,035 - 50,786,313UniSTSGRCh37
Build 36631,353,532 - 31,353,655RGDNCBI36
Celera1527,677,615 - 27,678,893UniSTS
Celera632,844,223 - 32,844,346RGD
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map15q21.2UniSTS
HuRef631,046,173 - 31,046,296UniSTS
HuRef1527,615,501 - 27,616,779UniSTS
GeneMap99-GB4 RH Map6117.96UniSTS
NCBI RH Map6428.4UniSTS
RH45725  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371550,793,098 - 50,793,247UniSTSGRCh37
Build 361548,580,390 - 48,580,539RGDNCBI36
Celera1527,685,676 - 27,685,825RGD
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map15q21.2UniSTS
HuRef1527,623,504 - 27,623,653UniSTS
GeneMap99-GB4 RH Map15179.43UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4973 1726 2351 6 624 1951 465 2269 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 30 of 38 rows
RefSeq Transcripts NG_047101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001128610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001283049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006720761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006720762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011522193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017022718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017022719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017022720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017022721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017022722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA399951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AA399952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AA773713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC012170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI276208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK091775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK292400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK300590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM751645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 38 rows

Ensembl Acc Id: ENST00000307179   ⟹   ENSP00000302239
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,405 - 50,514,421 (+)Ensembl
Ensembl Acc Id: ENST00000396444   ⟹   ENSP00000379721
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,382 - 50,514,419 (+)Ensembl
Ensembl Acc Id: ENST00000419830
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,493,185 - 50,499,695 (+)Ensembl
Ensembl Acc Id: ENST00000425032   ⟹   ENSP00000412682
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,387 - 50,499,415 (+)Ensembl
Ensembl Acc Id: ENST00000558091   ⟹   ENSP00000454059
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,426,894 - 50,459,070 (+)Ensembl
Ensembl Acc Id: ENST00000558892
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,399 - 50,444,616 (+)Ensembl
Ensembl Acc Id: ENST00000559242   ⟹   ENSP00000453320
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,439,026 - 50,462,310 (+)Ensembl
Ensembl Acc Id: ENST00000559329   ⟹   ENSP00000454003
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,405 - 50,481,702 (+)Ensembl
Ensembl Acc Id: ENST00000560297   ⟹   ENSP00000453206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,380 - 50,449,440 (+)Ensembl
Ensembl Acc Id: ENST00000560379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,498,497 - 50,499,407 (+)Ensembl
Ensembl Acc Id: ENST00000560527
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,458,503 - 50,471,735 (+)Ensembl
Ensembl Acc Id: ENST00000560730   ⟹   ENSP00000452950
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,415 - 50,481,705 (+)Ensembl
Ensembl Acc Id: ENST00000560885
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,405 - 50,462,305 (+)Ensembl
Ensembl Acc Id: ENST00000560954
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,382 - 50,459,134 (+)Ensembl
Ensembl Acc Id: ENST00000560982   ⟹   ENSP00000453427
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,448 - 50,441,463 (+)Ensembl
Ensembl Acc Id: ENST00000561206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,489,494 - 50,490,430 (+)Ensembl
Ensembl Acc Id: ENST00000561211   ⟹   ENSP00000457345
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,494 - 50,465,173 (+)Ensembl
Ensembl Acc Id: ENST00000561330   ⟹   ENSP00000453460
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,439,043 - 50,481,705 (+)Ensembl
Ensembl Acc Id: ENST00000625664   ⟹   ENSP00000485810
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1550,424,427 - 50,481,682 (+)Ensembl
RefSeq Acc Id: NM_001128610   ⟹   NP_001122082
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381550,424,405 - 50,514,421 (+)NCBI
GRCh371550,716,579 - 50,793,280 (+)NCBI
HuRef1527,547,367 - 27,623,686 (+)NCBI
CHM1_11550,834,666 - 50,911,289 (+)NCBI
T2T-CHM13v2.01548,232,513 - 48,322,500 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001283049   ⟹   NP_001269978
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381550,424,405 - 50,514,421 (+)NCBI
HuRef1527,547,367 - 27,623,686 (+)NCBI
CHM1_11550,834,666 - 50,911,289 (+)NCBI
T2T-CHM13v2.01548,232,513 - 48,322,500 (+)NCBI
Sequence:
RefSeq Acc Id: NM_005154   ⟹   NP_005145
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381550,424,405 - 50,514,421 (+)NCBI
GRCh371550,716,579 - 50,793,280 (+)NCBI
Build 361548,503,871 - 48,579,265 (+)NCBI Archive
HuRef1527,547,367 - 27,623,686 (+)NCBI
CHM1_11550,834,666 - 50,911,289 (+)NCBI
T2T-CHM13v2.01548,232,513 - 48,322,500 (+)NCBI
Sequence:
1 to 5 of 15 rows
1 to 5 of 15 rows
RefSeq Acc Id: NP_001122082   ⟸   NM_001128610
- Peptide Label: isoform a
- UniProtKB: Q86VA0 (UniProtKB/Swiss-Prot),   Q7Z3U2 (UniProtKB/Swiss-Prot),   Q2TB31 (UniProtKB/Swiss-Prot),   B4DKA8 (UniProtKB/Swiss-Prot),   Q8IWI7 (UniProtKB/Swiss-Prot),   P40818 (UniProtKB/Swiss-Prot),   A8K8N5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_005145   ⟸   NM_005154
- Peptide Label: isoform a
- UniProtKB: Q86VA0 (UniProtKB/Swiss-Prot),   Q7Z3U2 (UniProtKB/Swiss-Prot),   Q2TB31 (UniProtKB/Swiss-Prot),   B4DKA8 (UniProtKB/Swiss-Prot),   Q8IWI7 (UniProtKB/Swiss-Prot),   P40818 (UniProtKB/Swiss-Prot),   A8K8N5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001269978   ⟸   NM_001283049
- Peptide Label: isoform b
- UniProtKB: A8K8N5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000412682   ⟸   ENST00000425032
Ensembl Acc Id: ENSP00000302239   ⟸   ENST00000307179
MIT   Rhodanese   USP   USP8 dimerisation

Name Modeler Protein Id AA Range Protein Structure
AF-P40818-F1-model_v2 AlphaFold P40818 1-1118 view protein structure

RGD ID:6792713
Promoter ID:HG_KWN:21353
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000396444,   NM_001128611,   NM_005154,   UC001ZYK.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361548,503,036 - 48,503,972 (+)MPROMDB
RGD ID:7229469
Promoter ID:EPDNEW_H20480
Type:initiation region
Name:USP8_1
Description:ubiquitin specific peptidase 8
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381550,424,405 - 50,424,465EPDNEW


1 to 40 of 62 rows
Database
Acc Id
Source(s)
COSMIC USP8 COSMIC
Ensembl Genes ENSG00000138592 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000307179 ENTREZGENE
  ENST00000307179.9 UniProtKB/Swiss-Prot
  ENST00000396444 ENTREZGENE
  ENST00000396444.7 UniProtKB/Swiss-Prot
  ENST00000425032 ENTREZGENE
  ENST00000425032.7 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.250.10 UniProtKB/Swiss-Prot
  Cysteine proteinases UniProtKB/Swiss-Prot
  Phosphotransferase system, lactose/cellobiose-type IIA subunit UniProtKB/Swiss-Prot
GTEx ENSG00000138592 GTEx
HGNC ID HGNC:12631 ENTREZGENE
Human Proteome Map USP8 Human Proteome Map
InterPro Papain-like_cys_pep_sf UniProtKB/Swiss-Prot
  Peptidase_C19_UCH UniProtKB/Swiss-Prot
  Rhodanese-like_dom UniProtKB/Swiss-Prot
  Rhodanese-like_dom_sf UniProtKB/Swiss-Prot
  Ub_carboxyl-term_hydrolase UniProtKB/Swiss-Prot
  USP8_dimer UniProtKB/Swiss-Prot
  USP_CS UniProtKB/Swiss-Prot
  USP_dom UniProtKB/Swiss-Prot
  WW_USP8 UniProtKB/Swiss-Prot
KEGG Report hsa:9101 UniProtKB/Swiss-Prot
NCBI Gene 9101 ENTREZGENE
OMIM 603158 OMIM
PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE UniProtKB/Swiss-Prot
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 8 UniProtKB/Swiss-Prot
Pfam Rhodanese UniProtKB/Swiss-Prot
  UCH UniProtKB/Swiss-Prot
  USP8_dimer UniProtKB/Swiss-Prot
  WW_USP8 UniProtKB/Swiss-Prot
PharmGKB PA37256 PharmGKB
PROSITE RHODANESE_3 UniProtKB/Swiss-Prot
  USP_1 UniProtKB/Swiss-Prot
  USP_2 UniProtKB/Swiss-Prot
  USP_3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF52821 UniProtKB/Swiss-Prot
  SSF54001 UniProtKB/Swiss-Prot
  USP8 N-terminal domain-like UniProtKB/Swiss-Prot
1 to 40 of 62 rows