GWAS1156623_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1156623_H (FEV/FVC ratio QTL GWAS1156623 (human)) Homo sapiens

Symbol: GWAS1156623_H
Name: FEV/FVC ratio QTL GWAS1156623 (human)
RGD ID: 597060549
Trait: FEV/FVC ratio
Measurement Type: forced expiratory volume to forced vital capacity ratio   (CMO:0000241)    
LOD Score: Not Available
P Value: 3.0E-13
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381550,426,364 - 50,426,365RGD_MAPPER_PIPELINEGRCh38
GRCh371550,718,561 - 50,718,562RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1156623_HHumanforced expiratory volume to forced vital capacity ratio  IAGPrs7164347405850206 GWAS_CATALOGPMID:30595370

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1156623_HHumanFEV/FVC ratio  IAGPrs7164347405850206 GWAS_CATALOGPMID:30595370

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1312730USP8ubiquitin specific peptidase 8155042440550514421Human


Peak: (rs7164347)
Human AssemblyChrPosition (strand)Source
GRCh381550,426,364 - 50,426,365RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
597060549GWAS1156623_HFEV/FVC ratio QTL GWAS1156623 (human)3e-13FEV/FVC ratioforced expiratory volume to forced vital capacity ratio (CMO:0000241)155042636450426365Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1156623_H GCST007080 Lung function (FEV1/FVC) approximately 370,000 European ancestry individuals ? NR 3E-13 12.523 rs7164347 N/A FEV/FVC ratio (EFO:0004713)
 PMID:30595370
Database
Acc Id
Source(s)
GWAS Catalog GCST007080 GWAS Catalog

Note Type Note Reference