ARMC3 (armadillo repeat containing 3) - Rat Genome Database

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Gene: ARMC3 (armadillo repeat containing 3) Homo sapiens
Analyze
Symbol: ARMC3
Name: armadillo repeat containing 3
RGD ID: 1312695
HGNC Page HGNC:30964
Description: Predicted to be involved in flagellated sperm motility; ribophagy; and spermatid development. Located in extracellular exosome.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: armadillo repeat-containing protein 3; beta-catenin-like protein; cancer/testis antigen 81; CT81; FLJ25845; FLJ32827; KU-CT-1; RP11-300B11.1; VAC8
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381022,928,053 - 23,038,523 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1022,928,024 - 23,038,523 (+)EnsemblGRCh38hg38GRCh38
GRCh371023,216,982 - 23,327,452 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361023,256,966 - 23,366,520 (+)NCBINCBI36Build 36hg18NCBI36
Build 341023,256,965 - 23,366,520NCBI
Celera1022,904,614 - 23,014,160 (+)NCBICelera
Cytogenetic Map10p12.2NCBI
HuRef1022,877,824 - 22,986,594 (+)NCBIHuRef
CHM1_11023,217,435 - 23,327,017 (+)NCBICHM1_1
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ARMC3HumanFamilial Persistent Stuttering 4  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Stuttering more ...ClinVar 

1 to 20 of 36 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ARMC3Human1,2-dimethylhydrazine decreases expressionISOArmc3 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of ARMC3 mRNACTDPMID:22206623
ARMC3Human17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of ARMC3 mRNACTDPMID:31614463
ARMC3Human2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOArmc3 (Rattus norvegicus)64804642 more ...CTDPMID:32109520
ARMC3Human4,4'-sulfonyldiphenol increases expressionISOArmc3 (Mus musculus)6480464bisphenol S results in increased expression of ARMC3 mRNACTDPMID:30951980
ARMC3Human4,4'-sulfonyldiphenol affects methylationISOArmc3 (Mus musculus)6480464bisphenol S affects the methylation of ARMC3 geneCTDPMID:31683443
ARMC3Human6-propyl-2-thiouracil increases expressionISOArmc3 (Rattus norvegicus)6480464Propylthiouracil results in increased expression of ARMC3 mRNACTDPMID:24780913
ARMC3Humanacetamide increases expressionISOArmc3 (Rattus norvegicus)6480464acetamide results in increased expression of ARMC3 mRNACTDPMID:31881176
ARMC3Humanacrolein decreases expressionISOArmc3 (Rattus norvegicus)6480464Acrolein results in decreased expression of ARMC3 mRNACTDPMID:38090360
ARMC3Humanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of ARMC3 geneCTDPMID:27153756
ARMC3HumanAflatoxin B2 alpha decreases methylationEXP 6480464aflatoxin B2 results in decreased methylation of ARMC3 intronCTDPMID:30157460
ARMC3Humanaristolochic acid A decreases expressionEXP 6480464aristolochic acid I results in decreased expression of ARMC3 mRNACTDPMID:33212167
ARMC3Humanbenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of ARMC3 mRNACTDPMID:22316170
ARMC3Humanbenzo[a]pyrene increases methylationEXP 6480464Benzo(a)pyrene results in increased methylation of ARMC3 3' UTR more ...CTDPMID:27901495
ARMC3Humanbenzo[a]pyrene increases expressionISOArmc3 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of ARMC3 mRNACTDPMID:27195522
ARMC3Humanbis(2-ethylhexyl) phthalate increases expressionISOArmc3 (Mus musculus)6480464Diethylhexyl Phthalate results in increased expression of ARMC3 mRNACTDPMID:34319233
ARMC3Humanbisphenol A increases expressionISOArmc3 (Mus musculus)6480464bisphenol A results in increased expression of ARMC3 mRNACTDPMID:30951980 and PMID:35598803
ARMC3Humanbisphenol A increases expressionISOArmc3 (Rattus norvegicus)6480464bisphenol A results in increased expression of ARMC3 mRNACTDPMID:34947998
ARMC3Humanbisphenol A decreases expressionISOArmc3 (Rattus norvegicus)6480464bisphenol A results in decreased expression of ARMC3 mRNACTDPMID:30816183
ARMC3Humanbisphenol F increases expressionISOArmc3 (Mus musculus)6480464bisphenol F results in increased expression of ARMC3 mRNACTDPMID:30951980
ARMC3Humancadmium atom multiple interactionsEXP 6480464[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of ARMC3 mRNACTDPMID:35301059

1 to 20 of 36 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ARMC3Humanautophagy involved_inIEAUniProtKB-KW:KW-0072150520179 UniProtGO_REF:0000043
ARMC3Humancell differentiation involved_inIEAUniProtKB-KW:KW-0221150520179 UniProtGO_REF:0000043
ARMC3Humanflagellated sperm motility involved_inISSUniProtKB:A2AU72150520179 UniProtGO_REF:0000024
ARMC3Humanribophagy involved_inISSUniProtKB:A2AU72150520179 UniProtGO_REF:0000024
ARMC3Humanspermatid development involved_inISSUniProtKB:A2AU72150520179 UniProtGO_REF:0000024
ARMC3Humanspermatogenesis involved_inIEAUniProtKB-KW:KW-0744150520179 UniProtGO_REF:0000043

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ARMC3Humanextracellular exosome located_inHDA 150520179 PMID:19056867UniProtPMID:19056867

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ARMC3Humanprotein binding enablesISOUniProtKB:O88597 more ...9068941 PMID:34428398UniProtPMID:34428398


#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8889548   PMID:12477932   PMID:14702039   PMID:16385451   PMID:16397042   PMID:16915934   PMID:19056867   PMID:20379614   PMID:23382691   PMID:26923438   PMID:30021884   PMID:32393512  
PMID:32616903   PMID:33961781   PMID:34705610   PMID:35575683   PMID:36553564   PMID:39221575  



ARMC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381022,928,053 - 23,038,523 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1022,928,024 - 23,038,523 (+)EnsemblGRCh38hg38GRCh38
GRCh371023,216,982 - 23,327,452 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361023,256,966 - 23,366,520 (+)NCBINCBI36Build 36hg18NCBI36
Build 341023,256,965 - 23,366,520NCBI
Celera1022,904,614 - 23,014,160 (+)NCBICelera
Cytogenetic Map10p12.2NCBI
HuRef1022,877,824 - 22,986,594 (+)NCBIHuRef
CHM1_11023,217,435 - 23,327,017 (+)NCBICHM1_1
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBIT2T-CHM13v2.0
Armc3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39219,203,676 - 19,315,054 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl219,204,113 - 19,315,052 (+)EnsemblGRCm39 Ensembl
GRCm38219,198,865 - 19,310,243 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl219,199,302 - 19,310,241 (+)EnsemblGRCm38mm10GRCm38
MGSCv37219,120,745 - 19,231,861 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36219,116,872 - 19,227,988 (+)NCBIMGSCv36mm8
Celera219,104,793 - 19,208,375 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map213.2NCBI
Armc3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81786,722,436 - 86,825,899 (+)NCBIGRCr8
mRatBN7.21781,814,087 - 81,917,534 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1781,832,518 - 81,917,531 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1785,297,704 - 85,382,538 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01789,133,120 - 89,217,975 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01783,149,878 - 83,234,738 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01785,895,841 - 86,009,403 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1785,914,410 - 86,009,396 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01787,610,808 - 87,726,061 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41793,278,359 - 93,361,623 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1781,103,766 - 81,187,813 (+)NCBICelera
Cytogenetic Map17q12.3NCBI
Armc3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554295,947,940 - 6,051,038 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554295,949,180 - 6,050,690 (-)NCBIChiLan1.0ChiLan1.0
ARMC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2835,527,861 - 35,721,296 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11035,533,182 - 35,724,736 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01023,085,591 - 23,196,943 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11023,460,342 - 23,570,908 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1023,460,348 - 23,570,908 (+)Ensemblpanpan1.1panPan2
ARMC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1210,201,347 - 10,302,951 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl210,202,329 - 10,302,733 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha28,895,514 - 8,996,035 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.028,400,242 - 8,500,787 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl28,400,246 - 8,500,665 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.127,765,696 - 7,866,137 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.027,848,514 - 7,949,051 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.028,016,960 - 8,117,519 (-)NCBIUU_Cfam_GSD_1.0
Armc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934422,746,484 - 22,844,963 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365205,116,628 - 5,211,163 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365205,116,628 - 5,211,163 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARMC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1051,959,610 - 52,049,425 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11051,959,571 - 52,050,071 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21057,615,066 - 57,704,928 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARMC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1922,683,911 - 22,800,051 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl922,685,028 - 22,800,926 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605128,442,972 - 28,564,471 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Armc3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247965,678,701 - 5,778,443 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247965,679,159 - 5,781,173 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in ARMC3
73 total Variants

1 to 10 of 86 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_173081.5(ARMC3):c.1676C>G (p.Thr559Ser) single nucleotide variant not specified [RCV004157926] Chr10:23003359 [GRCh38]
Chr10:23292288 [GRCh37]
Chr10:10p12.2
uncertain significance
GRCh38/hg38 10p15.3-12.1(chr10:90421-29058318)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053512]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053512]|See cases [RCV000053512] Chr10:90421..29058318 [GRCh38]
Chr10:224406..29347247 [GRCh37]
Chr10:126361..29387253 [NCBI36]
Chr10:10p15.3-12.1
pathogenic
NM_173081.4(ARMC3):c.1575C>T (p.Ile525=) single nucleotide variant Malignant melanoma [RCV000068890] Chr10:23003258 [GRCh38]
Chr10:23292187 [GRCh37]
Chr10:23332193 [NCBI36]
Chr10:10p12.2
not provided
GRCh38/hg38 10p15.3-12.1(chr10:90205-26339978)x3 copy number gain See cases [RCV000138428] Chr10:90205..26339978 [GRCh38]
Chr10:224406..26628907 [GRCh37]
Chr10:126145..26668913 [NCBI36]
Chr10:10p15.3-12.1
pathogenic
GRCh38/hg38 10p12.31-11.22(chr10:19088161-32732293)x3 copy number gain See cases [RCV000139427] Chr10:19088161..32732293 [GRCh38]
Chr10:19377090..33021221 [GRCh37]
Chr10:19417096..33061227 [NCBI36]
Chr10:10p12.31-11.22
likely pathogenic
GRCh38/hg38 10p15.1-q11.22(chr10:4604734-48074662)x3 copy number gain See cases [RCV000141497] Chr10:4604734..48074662 [GRCh38]
Chr10:4646926..47531169 [GRCh37]
Chr10:4636926..47125152 [NCBI36]
Chr10:10p15.1-q11.22
benign
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143) copy number gain See cases [RCV000511389] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic|uncertain significance
GRCh37/hg19 10p15.3-11.23(chr10:100026-30278548)x3 copy number gain See cases [RCV000447131] Chr10:100026..30278548 [GRCh37]
Chr10:10p15.3-11.23
pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:93297-135378918)x3 copy number gain See cases [RCV000448750] Chr10:93297..135378918 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)x3 copy number gain See cases [RCV000510861] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
1 to 10 of 86 rows

Predicted Target Of
Summary Value
Count of predictions:1257
Count of miRNA genes:705
Interacting mature miRNAs:831
Transcripts:ENST00000298032, ENST00000376528, ENST00000409049, ENST00000409983, ENST00000447081, ENST00000464017, ENST00000465729, ENST00000468003, ENST00000473919, ENST00000483596, ENST00000484642, ENST00000491803, ENST00000496741
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 10 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597438732GWAS1534806_Hsystemic lupus erythematosus QTL GWAS1534806 (human)0.0000002systemic lupus erythematosus102296018022960181Human
597255064GWAS1351138_Hage at first sexual intercourse measurement QTL GWAS1351138 (human)1e-19age at first sexual intercourse measurement102296392222963928Human
1643515BW287_HBody Weight QTL 287 (human)2.450.0004Body weightBMI101842411044424110Human
597380584GWAS1476658_Hserum IgG glycosylation measurement QTL GWAS1476658 (human)0.000006serum IgG glycosylation measurement102301432423014325Human
597331999GWAS1428073_HS-6-hydroxywarfarin measurement QTL GWAS1428073 (human)0.000001S-6-hydroxywarfarin measurement102292951922929520Human
597403996GWAS1500070_Hprotein measurement QTL GWAS1500070 (human)3e-08protein measurement102296028922960290Human
597380259GWAS1476333_Hserum IgG glycosylation measurement QTL GWAS1476333 (human)0.0000006serum IgG glycosylation measurement102301432423014325Human
1300009BW22_HBody weight QTL 22 (human)2.32Body weightbody mass index101842411044424110Human
597375623GWAS1471697_Hserum IgG glycosylation measurement QTL GWAS1471697 (human)0.000002serum IgG glycosylation measurement102301432423014325Human
597380582GWAS1476656_Hserum IgG glycosylation measurement QTL GWAS1476656 (human)0.000003serum IgG glycosylation measurement102301432423014325Human

1 to 10 of 10 rows
RH103830  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371023,321,338 - 23,321,431UniSTSGRCh37
Build 361023,361,344 - 23,361,437RGDNCBI36
Celera1023,008,984 - 23,009,077RGD
Cytogenetic Map10p12.31UniSTS
HuRef1022,981,418 - 22,981,511UniSTS
GeneMap99-GB4 RH Map10135.41UniSTS
G65505  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371023,256,729 - 23,257,005UniSTSGRCh37
Build 361023,296,735 - 23,297,011RGDNCBI36
Celera1022,944,385 - 22,944,661RGD
Cytogenetic Map10p12.31UniSTS
HuRef1022,917,611 - 22,917,887UniSTS
AB070084  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371023,287,135 - 23,287,234UniSTSGRCh37
Build 361023,327,141 - 23,327,240RGDNCBI36
Celera1022,974,792 - 22,974,891RGD
HuRef1022,948,019 - 22,948,118UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
533 1839 1496 1544 3817 1100 1716 1 277 1120 142 1050 4333 3895 12 3521 612 1424 1363 141


1 to 30 of 33 rows
RefSeq Transcripts NM_001282745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_173081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005252380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005252381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011519350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011519351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017015831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017015832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017015833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA628128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC079269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK098711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL139815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY436643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX115364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB240778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 33 rows

Ensembl Acc Id: ENST00000298032   ⟹   ENSP00000298032
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,053 - 23,038,523 (+)Ensembl
Ensembl Acc Id: ENST00000376528   ⟹   ENSP00000365711
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,024 - 23,038,523 (+)Ensembl
Ensembl Acc Id: ENST00000409049   ⟹   ENSP00000387288
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,064 - 23,014,489 (+)Ensembl
Ensembl Acc Id: ENST00000409983   ⟹   ENSP00000386943
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,037 - 23,037,589 (+)Ensembl
Ensembl Acc Id: ENST00000447081   ⟹   ENSP00000396629
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,085 - 22,961,966 (+)Ensembl
Ensembl Acc Id: ENST00000464017
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,955,196 - 22,961,727 (+)Ensembl
Ensembl Acc Id: ENST00000465729
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,931,996 - 22,946,683 (+)Ensembl
Ensembl Acc Id: ENST00000468003
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,085 - 22,968,342 (+)Ensembl
Ensembl Acc Id: ENST00000473919
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1023,030,631 - 23,031,195 (+)Ensembl
Ensembl Acc Id: ENST00000483596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,086 - 22,962,067 (+)Ensembl
Ensembl Acc Id: ENST00000484642
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,077 - 22,981,608 (+)Ensembl
Ensembl Acc Id: ENST00000491803
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1023,006,735 - 23,008,374 (+)Ensembl
Ensembl Acc Id: ENST00000496741
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1022,928,077 - 22,981,453 (+)Ensembl
RefSeq Acc Id: NM_001282745   ⟹   NP_001269674
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,038,523 (+)NCBI
HuRef1022,877,823 - 22,987,532 (+)NCBI
CHM1_11023,217,434 - 23,327,955 (+)NCBI
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282746   ⟹   NP_001269675
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,014,477 (+)NCBI
HuRef1022,877,823 - 22,987,532 (+)NCBI
CHM1_11023,217,434 - 23,303,912 (+)NCBI
T2T-CHM13v2.01022,947,064 - 23,033,438 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282747   ⟹   NP_001269676
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,038,523 (+)NCBI
HuRef1022,877,823 - 22,987,532 (+)NCBI
CHM1_11023,217,434 - 23,327,955 (+)NCBI
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBI
Sequence:
RefSeq Acc Id: NM_173081   ⟹   NP_775104
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,038,523 (+)NCBI
GRCh371023,216,954 - 23,327,452 (+)NCBI
Build 361023,256,966 - 23,366,520 (+)NCBI Archive
Celera1022,904,614 - 23,014,160 (+)RGD
HuRef1022,877,823 - 22,987,532 (+)NCBI
CHM1_11023,217,434 - 23,327,955 (+)NCBI
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005252380   ⟹   XP_005252437
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,038,523 (+)NCBI
GRCh371023,216,954 - 23,327,452 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005252381   ⟹   XP_005252438
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,038,523 (+)NCBI
GRCh371023,216,954 - 23,327,452 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011519350   ⟹   XP_011517652
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,016,939 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011519351   ⟹   XP_011517653
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,995,953 - 23,038,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017015831   ⟹   XP_016871320
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,038,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017015832   ⟹   XP_016871321
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,014,477 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017015833   ⟹   XP_016871322
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,053 - 23,014,477 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054365001   ⟹   XP_054220976
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBI
RefSeq Acc Id: XM_054365002   ⟹   XP_054220977
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBI
RefSeq Acc Id: XM_054365003   ⟹   XP_054220978
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01022,947,064 - 23,057,478 (+)NCBI
RefSeq Acc Id: XM_054365004   ⟹   XP_054220979
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01022,947,064 - 23,035,900 (+)NCBI
RefSeq Acc Id: XM_054365005   ⟹   XP_054220980
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01022,947,064 - 23,033,438 (+)NCBI
RefSeq Acc Id: XM_054365006   ⟹   XP_054220981
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01022,947,064 - 23,033,438 (+)NCBI
RefSeq Acc Id: XM_054365007   ⟹   XP_054220982
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01023,014,965 - 23,057,478 (+)NCBI
1 to 30 of 35 rows
Protein RefSeqs NP_001269674 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269675 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269676 (Get FASTA)   NCBI Sequence Viewer  
  NP_775104 (Get FASTA)   NCBI Sequence Viewer  
  XP_005252437 (Get FASTA)   NCBI Sequence Viewer  
  XP_005252438 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517652 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517653 (Get FASTA)   NCBI Sequence Viewer  
  XP_016871320 (Get FASTA)   NCBI Sequence Viewer  
  XP_016871321 (Get FASTA)   NCBI Sequence Viewer  
  XP_016871322 (Get FASTA)   NCBI Sequence Viewer  
  XP_054220976 (Get FASTA)   NCBI Sequence Viewer  
  XP_054220977 (Get FASTA)   NCBI Sequence Viewer  
  XP_054220978 (Get FASTA)   NCBI Sequence Viewer  
  XP_054220979 (Get FASTA)   NCBI Sequence Viewer  
  XP_054220980 (Get FASTA)   NCBI Sequence Viewer  
  XP_054220981 (Get FASTA)   NCBI Sequence Viewer  
  XP_054220982 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH39312 (Get FASTA)   NCBI Sequence Viewer  
  AAR99738 (Get FASTA)   NCBI Sequence Viewer  
  BAB71463 (Get FASTA)   NCBI Sequence Viewer  
  BAC05389 (Get FASTA)   NCBI Sequence Viewer  
  BAG63485 (Get FASTA)   NCBI Sequence Viewer  
  BAG64125 (Get FASTA)   NCBI Sequence Viewer  
  EAW86137 (Get FASTA)   NCBI Sequence Viewer  
  EAW86138 (Get FASTA)   NCBI Sequence Viewer  
  EAW86139 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000298032
  ENSP00000298032.5
  ENSP00000365711
1 to 30 of 35 rows
1 to 5 of 23 rows
1 to 5 of 23 rows
RefSeq Acc Id: NP_775104   ⟸   NM_173081
- Peptide Label: isoform 1
- UniProtKB: Q8N7B0 (UniProtKB/Swiss-Prot),   Q8IXS5 (UniProtKB/Swiss-Prot),   B7ZBN7 (UniProtKB/Swiss-Prot),   B7ZBN6 (UniProtKB/Swiss-Prot),   B4DZL3 (UniProtKB/Swiss-Prot),   A6NH64 (UniProtKB/Swiss-Prot),   A0PG76 (UniProtKB/Swiss-Prot),   Q96M49 (UniProtKB/Swiss-Prot),   Q5W041 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005252437   ⟸   XM_005252380
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005252438   ⟸   XM_005252381
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001269674   ⟸   NM_001282745
- Peptide Label: isoform 2
- UniProtKB: Q5W041 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001269676   ⟸   NM_001282747
- Peptide Label: isoform 4
- UniProtKB: B4DXS3 (UniProtKB/TrEMBL)
- Sequence:
Name Modeler Protein Id AA Range Protein Structure
AF-Q5W041-F1-model_v2 AlphaFold Q5W041 1-872 view protein structure

RGD ID:7217173
Promoter ID:EPDNEW_H14333
Type:initiation region
Name:ARMC3_2
Description:armadillo repeat containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14334  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,927,924 - 22,927,984EPDNEW
RGD ID:7217175
Promoter ID:EPDNEW_H14334
Type:initiation region
Name:ARMC3_1
Description:armadillo repeat containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14333  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381022,928,074 - 22,928,134EPDNEW
RGD ID:6787359
Promoter ID:HG_KWN:8848
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:ENST00000376523,   ENST00000376528,   ENST00000409049,   ENST00000409983,   OTTHUMT00000047197,   OTTHUMT00000047203,   OTTHUMT00000334597,   OTTHUMT00000334598,   OTTHUMT00000334599,   OTTHUMT00000334600
Position:
Human AssemblyChrPosition (strand)Source
Build 361023,256,616 - 23,257,116 (+)MPROMDB


1 to 40 of 49 rows
Database
Acc Id
Source(s)
COSMIC ARMC3 COSMIC
Ensembl Genes ENSG00000165309 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000298032 ENTREZGENE
  ENST00000298032.10 UniProtKB/Swiss-Prot
  ENST00000376528 ENTREZGENE
  ENST00000409049 ENTREZGENE
  ENST00000409049.7 UniProtKB/Swiss-Prot
  ENST00000409983 ENTREZGENE
  ENST00000409983.7 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot
GTEx ENSG00000165309 GTEx
HGNC ID HGNC:30964 ENTREZGENE
Human Proteome Map ARMC3 Human Proteome Map
InterPro ARM-like UniProtKB/Swiss-Prot
  ARM-type_fold UniProtKB/Swiss-Prot
  Armadillo UniProtKB/Swiss-Prot
  Armadillo-Ser/Thr_Kinase UniProtKB/Swiss-Prot
  EDR1/CTR1/ARMC3-like_pept-like UniProtKB/Swiss-Prot
KEGG Report hsa:219681 UniProtKB/Swiss-Prot
NCBI Gene 219681 ENTREZGENE
OMIM 611226 OMIM
PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 UniProtKB/Swiss-Prot
  ARMADILLO REPEAT-CONTAINING PROTEIN 3 UniProtKB/Swiss-Prot
Pfam Arm UniProtKB/Swiss-Prot
  EDR1 UniProtKB/Swiss-Prot
PharmGKB PA134917281 PharmGKB
PROSITE ARM_REPEAT UniProtKB/Swiss-Prot
SMART ARM UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot
UniProt A0PG76 ENTREZGENE
  A6NH64 ENTREZGENE
  ARMC3_HUMAN UniProtKB/Swiss-Prot
  B4DXS3 ENTREZGENE, UniProtKB/TrEMBL
  B4DZL3 ENTREZGENE
  B7ZBN6 ENTREZGENE
  B7ZBN7 ENTREZGENE
  C9JC46_HUMAN UniProtKB/TrEMBL
  Q5W041 ENTREZGENE
  Q8IXS5 ENTREZGENE
  Q8N7B0 ENTREZGENE
1 to 40 of 49 rows