GRCh38/hg38 1q22-23.1(chr1:156593261-156653428)x3 |
copy number gain |
See cases [RCV000051554] |
Chr1:156593261..156653428 [GRCh38] Chr1:156563053..156623220 [GRCh37] Chr1:154829677..154889844 [NCBI36] Chr1:1q22-23.1 |
uncertain significance |
NM_144772.3(NAXE):c.435del (p.Arg145fs) |
deletion |
not provided [RCV005078542] |
Chr1:156592588 [GRCh38] Chr1:156562380 [GRCh37] Chr1:1q22 |
pathogenic |
GRCh38/hg38 1q22-23.1(chr1:156256495-156681863)x1 |
copy number loss |
See cases [RCV000138561] |
Chr1:156256495..156681863 [GRCh38] Chr1:156226286..156651655 [GRCh37] Chr1:154492910..154918279 [NCBI36] Chr1:1q22-23.1 |
likely pathogenic |
GRCh38/hg38 1q21.3-23.1(chr1:154566501-157624084)x3 |
copy number gain |
See cases [RCV000139902] |
Chr1:154566501..157624084 [GRCh38] Chr1:154538977..157593874 [GRCh37] Chr1:152805601..155860498 [NCBI36] Chr1:1q21.3-23.1 |
pathogenic |
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 |
copy number gain |
See cases [RCV000143515] |
Chr1:149854269..180267197 [GRCh38] Chr1:149825831..180236332 [GRCh37] Chr1:148092455..178502955 [NCBI36] Chr1:1q21.2-25.2 |
pathogenic |
NM_144772.3(NAXE):c.653A>T (p.Asp218Val) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004576941] |
Chr1:156593544 [GRCh38] Chr1:156563336 [GRCh37] Chr1:1q22 |
pathogenic|not provided |
NM_144772.3(NAXE):c.177C>A (p.Tyr59Ter) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004576936] |
Chr1:156591981 [GRCh38] Chr1:156561773 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.804_807delinsA (p.Lys270del) |
indel |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004576939]|Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV000258817] |
Chr1:156594021..156594024 [GRCh38] Chr1:156563813..156563816 [GRCh37] Chr1:1q22 |
pathogenic|conflicting interpretations of pathogenicity |
NM_144772.3(NAXE):c.196C>T (p.Gln66Ter) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004576937] |
Chr1:156592114 [GRCh38] Chr1:156561906 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.743del (p.Ala248fs) |
deletion |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004576940] |
Chr1:156593960 [GRCh38] Chr1:156563752 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.516+1G>A |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004576938] |
Chr1:156592671 [GRCh38] Chr1:156562463 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.281C>A (p.Ala94Asp) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004576934] |
Chr1:156592199 [GRCh38] Chr1:156561991 [GRCh37] Chr1:1q22 |
pathogenic|uncertain significance |
Single allele |
inversion |
Pediatric metastatic thyroid tumour [RCV000585807] |
Chr1:154130985..156843877 [GRCh37] Chr1:1q21.3-23.1 |
likely pathogenic |
GRCh37/hg19 1q21.3-23.1(chr1:153751465-156660462)x3 |
copy number gain |
not provided [RCV000585385] |
Chr1:153751465..156660462 [GRCh37] Chr1:1q21.3-23.1 |
likely pathogenic |
NM_144772.3(NAXE):c.733A>C (p.Lys245Gln) |
single nucleotide variant |
not provided [RCV000484708] |
Chr1:156593950 [GRCh38] Chr1:156563742 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.468_478delinsATCCCTTTCCTTGGGG (p.Gln157fs) |
indel |
not provided [RCV000479500] |
Chr1:156592622..156592632 [GRCh38] Chr1:156562414..156562424 [GRCh37] Chr1:1q22 |
pathogenic |
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 |
copy number gain |
See cases [RCV000510383] |
Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) |
copy number gain |
See cases [RCV000510926] |
Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
GRCh37/hg19 1q22-23.1(chr1:155636337-158024499)x1 |
copy number loss |
not provided [RCV000684658] |
Chr1:155636337..158024499 [GRCh37] Chr1:1q22-23.1 |
pathogenic |
GRCh37/hg19 1q22-23.1(chr1:155999570-156844432)x3 |
copy number gain |
not provided [RCV000684659] |
Chr1:155999570..156844432 [GRCh37] Chr1:1q22-23.1 |
uncertain significance |
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 |
copy number gain |
not provided [RCV000736295] |
Chr1:47851..249228449 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 |
copy number gain |
not provided [RCV000736305] |
Chr1:82154..249218992 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
LMNA-NTRK1 fusion |
fusion |
Congenital fibrosarcoma [RCV000754610] |
Chr1:156100565..156844697 [GRCh37] Chr1:1q22-23.1 |
pathogenic |
NM_144772.3(NAXE):c.565G>A (p.Gly189Ser) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001095389] |
Chr1:156593456 [GRCh38] Chr1:156563248 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.*116C>G |
single nucleotide variant |
not provided [RCV001609488] |
Chr1:156594200 [GRCh38] Chr1:156563992 [GRCh37] Chr1:1q22 |
benign |
NC_000001.11:g.156591769CCGGG[5] |
microsatellite |
not provided [RCV001708926] |
Chr1:156591765..156591766 [GRCh38] Chr1:156561557..156561558 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.796G>A (p.Ala266Thr) |
single nucleotide variant |
not provided [RCV000900422] |
Chr1:156594013 [GRCh38] Chr1:156563805 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.516+9C>A |
single nucleotide variant |
not provided [RCV000881145] |
Chr1:156592679 [GRCh38] Chr1:156562471 [GRCh37] Chr1:1q22 |
benign|likely benign |
NM_144772.3(NAXE):c.354G>C (p.Gly118=) |
single nucleotide variant |
not provided [RCV000880360] |
Chr1:156592427 [GRCh38] Chr1:156562219 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.597G>A (p.Pro199=) |
single nucleotide variant |
not provided [RCV000923805] |
Chr1:156593488 [GRCh38] Chr1:156563280 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.326dup (p.Thr110fs) |
duplication |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV001267663]|Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV000785167]|NAXE-related disorder [RCV003411725]|not provided [RCV001873197] |
Chr1:156592393..156592394 [GRCh38] Chr1:156562185..156562186 [GRCh37] Chr1:1q22 |
pathogenic|likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 1q22-23.1(chr1:155770505-156652136)x3 |
copy number gain |
not provided [RCV000848811] |
Chr1:155770505..156652136 [GRCh37] Chr1:1q22-23.1 |
uncertain significance |
NM_144772.3(NAXE):c.490C>A (p.Pro164Thr) |
single nucleotide variant |
See cases [RCV003232997] |
Chr1:156592644 [GRCh38] Chr1:156562436 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.517-219T>C |
single nucleotide variant |
not provided [RCV001679403] |
Chr1:156593189 [GRCh38] Chr1:156562981 [GRCh37] Chr1:1q22 |
benign |
NC_000001.11:g.156591768_156591769insTCGGGCCGGG |
insertion |
not provided [RCV001649722] |
Chr1:156591765..156591766 [GRCh38] Chr1:156561557..156561558 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.213G>A (p.Glu71=) |
single nucleotide variant |
not provided [RCV000932639] |
Chr1:156592131 [GRCh38] Chr1:156561923 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.756C>T (p.Thr252=) |
single nucleotide variant |
not provided [RCV000916880] |
Chr1:156593973 [GRCh38] Chr1:156563765 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.473G>C (p.Cys158Ser) |
single nucleotide variant |
See cases [RCV003232627] |
Chr1:156592627 [GRCh38] Chr1:156562419 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.257T>C (p.Leu86Pro) |
single nucleotide variant |
Inborn genetic diseases [RCV002570707]|not provided [RCV001556033] |
Chr1:156592175 [GRCh38] Chr1:156561967 [GRCh37] Chr1:1q22 |
uncertain significance |
NC_000001.11:g.156591769CCGGG[6] |
microsatellite |
not provided [RCV001636424] |
Chr1:156591765..156591766 [GRCh38] Chr1:156561557..156561558 [GRCh37] Chr1:1q22 |
benign |
NC_000001.11:g.156591622T>C |
single nucleotide variant |
not provided [RCV001677829] |
Chr1:156591622 [GRCh38] Chr1:156561414 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.664+57T>G |
single nucleotide variant |
not provided [RCV001698657] |
Chr1:156593612 [GRCh38] Chr1:156563404 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.664+94G>A |
single nucleotide variant |
not provided [RCV001641106] |
Chr1:156593649 [GRCh38] Chr1:156563441 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.664+114A>T |
single nucleotide variant |
not provided [RCV001714086] |
Chr1:156593669 [GRCh38] Chr1:156563461 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.664+28G>A |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554162]|not provided [RCV001694106] |
Chr1:156593583 [GRCh38] Chr1:156563375 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.517-175A>G |
single nucleotide variant |
not provided [RCV001652433] |
Chr1:156593233 [GRCh38] Chr1:156563025 [GRCh37] Chr1:1q22 |
benign |
NC_000001.11:g.156597920C>T |
single nucleotide variant |
not provided [RCV003409150] |
Chr1:156597920 [GRCh38] Chr1:156567712 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.*22T>C |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554166]|not provided [RCV001694107] |
Chr1:156594106 [GRCh38] Chr1:156563898 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.430A>C (p.Lys144Gln) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001330393] |
Chr1:156592584 [GRCh38] Chr1:156562376 [GRCh37] Chr1:1q22 |
uncertain significance |
NC_000001.10:g.(?_130980840)_(248900000_?)dup |
duplication |
Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] |
Chr1:130980840..248900000 [GRCh37] Chr1:1q12-44 |
uncertain significance |
NM_144772.3(NAXE):c.385C>G (p.Arg129Gly) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001330392] |
Chr1:156592458 [GRCh38] Chr1:156562250 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.651C>T (p.Ile217=) |
single nucleotide variant |
not provided [RCV001499263] |
Chr1:156593542 [GRCh38] Chr1:156563334 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.292-14G>A |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554161]|not provided [RCV001515840] |
Chr1:156592351 [GRCh38] Chr1:156562143 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.846G>A (p.Glu282=) |
single nucleotide variant |
not provided [RCV001467121] |
Chr1:156594063 [GRCh38] Chr1:156563855 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.55G>C (p.Val19Leu) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554159]|not provided [RCV001517520] |
Chr1:156591859 [GRCh38] Chr1:156561651 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.291+7G>A |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554160]|not provided [RCV001517521] |
Chr1:156592216 [GRCh38] Chr1:156562008 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.717A>C (p.Ile239=) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554163]|not provided [RCV001517522] |
Chr1:156593934 [GRCh38] Chr1:156563726 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.804G>A (p.Glu268=) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554164]|not provided [RCV001517523] |
Chr1:156594021 [GRCh38] Chr1:156563813 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.843C>T (p.Thr281=) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001554165]|not provided [RCV001517524] |
Chr1:156594060 [GRCh38] Chr1:156563852 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.128C>A (p.Ser43Ter) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV003236334]|not provided [RCV004725695] |
Chr1:156591932 [GRCh38] Chr1:156561724 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.776G>A (p.Gly259Glu) |
single nucleotide variant |
not provided [RCV001772641] |
Chr1:156593993 [GRCh38] Chr1:156563785 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.668G>A (p.Trp223Ter) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001782498] |
Chr1:156593885 [GRCh38] Chr1:156563677 [GRCh37] Chr1:1q22 |
likely pathogenic |
NM_144772.3(NAXE):c.611T>C (p.Leu204Pro) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001775336] |
Chr1:156593502 [GRCh38] Chr1:156563294 [GRCh37] Chr1:1q22 |
likely pathogenic |
NM_144772.3(NAXE):c.229del (p.Gln77fs) |
deletion |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001775337] |
Chr1:156592146 [GRCh38] Chr1:156561938 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.180_182+1del |
deletion |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001782499] |
Chr1:156591984..156591987 [GRCh38] Chr1:156561776..156561779 [GRCh37] Chr1:1q22 |
likely pathogenic |
NM_144772.3(NAXE):c.536dup (p.Tyr180fs) |
duplication |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001808873] |
Chr1:156593426..156593427 [GRCh38] Chr1:156563218..156563219 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.811T>C (p.Tyr271His) |
single nucleotide variant |
not provided [RCV001896500] |
Chr1:156594028 [GRCh38] Chr1:156563820 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.536T>C (p.Leu179Pro) |
single nucleotide variant |
not provided [RCV001911359] |
Chr1:156593427 [GRCh38] Chr1:156563219 [GRCh37] Chr1:1q22 |
uncertain significance |
NC_000001.10:g.(?_155581953)_(156851434_?)del |
deletion |
Charcot-Marie-Tooth disease type 2 [RCV001983077] |
Chr1:155581953..156851434 [GRCh37] Chr1:1q22-23.1 |
pathogenic |
NM_144772.3(NAXE):c.559A>G (p.Ile187Val) |
single nucleotide variant |
not provided [RCV001911538] |
Chr1:156593450 [GRCh38] Chr1:156563242 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.262G>T (p.Gly88Trp) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV001844359] |
Chr1:156592180 [GRCh38] Chr1:156561972 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.310A>C (p.Met104Leu) |
single nucleotide variant |
not provided [RCV001907744] |
Chr1:156592383 [GRCh38] Chr1:156562175 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.541G>A (p.Glu181Lys) |
single nucleotide variant |
not provided [RCV001983749] |
Chr1:156593432 [GRCh38] Chr1:156563224 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.484G>C (p.Asp162His) |
single nucleotide variant |
not provided [RCV002041546] |
Chr1:156592638 [GRCh38] Chr1:156562430 [GRCh37] Chr1:1q22 |
uncertain significance |
NC_000001.10:g.(?_149895434)_(156851434_?)dup |
duplication |
Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001958273]|Congenital neutropenia-myelofibrosis-nephromegaly syndrome [RCV001958271]|Kostmann syndrome [RCV003120769]|MHC class II deficiency [RCV001992607] |
Chr1:149895434..156851434 [GRCh37] Chr1:1q21.2-23.1 |
uncertain significance |
NM_144772.3(NAXE):c.761G>A (p.Arg254His) |
single nucleotide variant |
not provided [RCV001963410] |
Chr1:156593978 [GRCh38] Chr1:156563770 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.412C>T (p.Pro138Ser) |
single nucleotide variant |
not provided [RCV002000922] |
Chr1:156592566 [GRCh38] Chr1:156562358 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.842_843delinsTT (p.Thr281Ile) |
indel |
not provided [RCV001931703] |
Chr1:156594059..156594060 [GRCh38] Chr1:156563851..156563852 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.641T>C (p.Ile214Thr) |
single nucleotide variant |
not provided [RCV001875591] |
Chr1:156593532 [GRCh38] Chr1:156563324 [GRCh37] Chr1:1q22 |
uncertain significance |
NC_000001.10:g.(?_154141761)_(156851434_?)dup |
duplication |
Charcot-Marie-Tooth disease type 2 [RCV001990060] |
Chr1:154141761..156851434 [GRCh37] Chr1:1q21.3-23.1 |
uncertain significance |
NM_144772.3(NAXE):c.1A>G (p.Met1Val) |
single nucleotide variant |
not provided [RCV002009905] |
Chr1:156591805 [GRCh38] Chr1:156561597 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.845A>T (p.Glu282Val) |
single nucleotide variant |
not provided [RCV001865208] |
Chr1:156594062 [GRCh38] Chr1:156563854 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.61C>T (p.Arg21Trp) |
single nucleotide variant |
not provided [RCV001974898] |
Chr1:156591865 [GRCh38] Chr1:156561657 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.20T>C (p.Leu7Pro) |
single nucleotide variant |
not provided [RCV001932560] |
Chr1:156591824 [GRCh38] Chr1:156561616 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.166G>C (p.Val56Leu) |
single nucleotide variant |
not provided [RCV001979524] |
Chr1:156591970 [GRCh38] Chr1:156561762 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.202G>C (p.Val68Leu) |
single nucleotide variant |
NAXE-related disorder [RCV003948853]|not provided [RCV001975652] |
Chr1:156592120 [GRCh38] Chr1:156561912 [GRCh37] Chr1:1q22 |
likely benign|uncertain significance |
NM_144772.3(NAXE):c.26_40del (p.Gly9_Leu13del) |
deletion |
not provided [RCV002028700] |
Chr1:156591822..156591836 [GRCh38] Chr1:156561614..156561628 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.560T>C (p.Ile187Thr) |
single nucleotide variant |
not provided [RCV001998777] |
Chr1:156593451 [GRCh38] Chr1:156563243 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.533A>G (p.Glu178Gly) |
single nucleotide variant |
not provided [RCV001906374] |
Chr1:156593424 [GRCh38] Chr1:156563216 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.241G>C (p.Asp81His) |
single nucleotide variant |
not provided [RCV001973041] |
Chr1:156592159 [GRCh38] Chr1:156561951 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.846G>C (p.Glu282Asp) |
single nucleotide variant |
not provided [RCV001992717] |
Chr1:156594063 [GRCh38] Chr1:156563855 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.487A>G (p.Ile163Val) |
single nucleotide variant |
not provided [RCV002013584] |
Chr1:156592641 [GRCh38] Chr1:156562433 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.191A>C (p.Glu64Ala) |
single nucleotide variant |
not provided [RCV001921552] |
Chr1:156592109 [GRCh38] Chr1:156561901 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.590G>A (p.Arg197Gln) |
single nucleotide variant |
not provided [RCV001917993] |
Chr1:156593481 [GRCh38] Chr1:156563273 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.291+6_291+7inv |
inversion |
not provided [RCV001897384] |
Chr1:156592215..156592216 [GRCh38] Chr1:156562007..156562008 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.246A>G (p.Gln82=) |
single nucleotide variant |
not provided [RCV002147023] |
Chr1:156592164 [GRCh38] Chr1:156561956 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.330T>C (p.Thr110=) |
single nucleotide variant |
not provided [RCV002192155] |
Chr1:156592403 [GRCh38] Chr1:156562195 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.517-15C>T |
single nucleotide variant |
not provided [RCV002116456]|not specified [RCV005239269] |
Chr1:156593393 [GRCh38] Chr1:156563185 [GRCh37] Chr1:1q22 |
benign|likely benign |
NM_144772.3(NAXE):c.825G>A (p.Leu275=) |
single nucleotide variant |
not provided [RCV002192183] |
Chr1:156594042 [GRCh38] Chr1:156563834 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.306G>A (p.Thr102=) |
single nucleotide variant |
not provided [RCV002195868] |
Chr1:156592379 [GRCh38] Chr1:156562171 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.165G>A (p.Thr55=) |
single nucleotide variant |
not provided [RCV002132438] |
Chr1:156591969 [GRCh38] Chr1:156561761 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.627A>G (p.Gly209=) |
single nucleotide variant |
not provided [RCV002219869] |
Chr1:156593518 [GRCh38] Chr1:156563310 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.665-12C>T |
single nucleotide variant |
not provided [RCV002143846] |
Chr1:156593870 [GRCh38] Chr1:156563662 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.402+14G>A |
single nucleotide variant |
not provided [RCV002082925] |
Chr1:156592489 [GRCh38] Chr1:156562281 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.57G>A (p.Val19=) |
single nucleotide variant |
not provided [RCV002199474] |
Chr1:156591861 [GRCh38] Chr1:156561653 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.182+14T>C |
single nucleotide variant |
not provided [RCV002183030] |
Chr1:156592000 [GRCh38] Chr1:156561792 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.516+10T>C |
single nucleotide variant |
not provided [RCV002120558] |
Chr1:156592680 [GRCh38] Chr1:156562472 [GRCh37] Chr1:1q22 |
likely benign |
NC_000001.10:g.(?_156554669)_(156568838_?)del |
deletion |
not provided [RCV003113644] |
Chr1:156554669..156568838 [GRCh37] Chr1:1q23.1 |
pathogenic |
NM_144772.3(NAXE):c.724A>G (p.Thr242Ala) |
single nucleotide variant |
not provided [RCV002296809] |
Chr1:156593941 [GRCh38] Chr1:156563733 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.113C>T (p.Pro38Leu) |
single nucleotide variant |
not provided [RCV002303370] |
Chr1:156591917 [GRCh38] Chr1:156561709 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.516+14G>A |
single nucleotide variant |
not provided [RCV002726891] |
Chr1:156592684 [GRCh38] Chr1:156562476 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.516+4G>C |
single nucleotide variant |
not provided [RCV002618578] |
Chr1:156592674 [GRCh38] Chr1:156562466 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.342C>T (p.Ile114=) |
single nucleotide variant |
not provided [RCV002795007] |
Chr1:156592415 [GRCh38] Chr1:156562207 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.524C>T (p.Thr175Met) |
single nucleotide variant |
not provided [RCV002968089] |
Chr1:156593415 [GRCh38] Chr1:156563207 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.703C>T (p.Pro235Ser) |
single nucleotide variant |
not provided [RCV002815374] |
Chr1:156593920 [GRCh38] Chr1:156563712 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.370G>T (p.Gly124Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV002839852] |
Chr1:156592443 [GRCh38] Chr1:156562235 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.182+13C>G |
single nucleotide variant |
not provided [RCV002617514] |
Chr1:156591999 [GRCh38] Chr1:156561791 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.174G>A (p.Lys58=) |
single nucleotide variant |
not provided [RCV002695065] |
Chr1:156591978 [GRCh38] Chr1:156561770 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.757G>A (p.Gly253Ser) |
single nucleotide variant |
not provided [RCV002800382] |
Chr1:156593974 [GRCh38] Chr1:156563766 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.842C>T (p.Thr281Ile) |
single nucleotide variant |
Inborn genetic diseases [RCV002868197]|not provided [RCV003883906] |
Chr1:156594059 [GRCh38] Chr1:156563851 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.758del (p.Gly253fs) |
deletion |
not provided [RCV002591083] |
Chr1:156593974 [GRCh38] Chr1:156563766 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.402+7A>T |
single nucleotide variant |
not provided [RCV002760167] |
Chr1:156592482 [GRCh38] Chr1:156562274 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.856C>T (p.Arg286Cys) |
single nucleotide variant |
not provided [RCV002953059] |
Chr1:156594073 [GRCh38] Chr1:156563865 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.582C>T (p.Gly194=) |
single nucleotide variant |
NAXE-related disorder [RCV003963492]|not provided [RCV002954056] |
Chr1:156593473 [GRCh38] Chr1:156563265 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.23T>C (p.Leu8Pro) |
single nucleotide variant |
Inborn genetic diseases [RCV002713673] |
Chr1:156591827 [GRCh38] Chr1:156561619 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.306G>T (p.Thr102=) |
single nucleotide variant |
not provided [RCV002852192] |
Chr1:156592379 [GRCh38] Chr1:156562171 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.294A>G (p.Ala98=) |
single nucleotide variant |
not provided [RCV002914974] |
Chr1:156592367 [GRCh38] Chr1:156562159 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.5C>T (p.Ser2Phe) |
single nucleotide variant |
not provided [RCV002740994] |
Chr1:156591809 [GRCh38] Chr1:156561601 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.676G>C (p.Glu226Gln) |
single nucleotide variant |
not provided [RCV002828568] |
Chr1:156593893 [GRCh38] Chr1:156563685 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.701A>G (p.Gln234Arg) |
single nucleotide variant |
Inborn genetic diseases [RCV002742216] |
Chr1:156593918 [GRCh38] Chr1:156563710 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.71G>A (p.Ser24Asn) |
single nucleotide variant |
not provided [RCV003005830] |
Chr1:156591875 [GRCh38] Chr1:156561667 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.183-6C>G |
single nucleotide variant |
not provided [RCV002596244] |
Chr1:156592095 [GRCh38] Chr1:156561887 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.848G>T (p.Cys283Phe) |
single nucleotide variant |
not provided [RCV002574308] |
Chr1:156594065 [GRCh38] Chr1:156563857 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.760C>T (p.Arg254Cys) |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV003330110]|Inborn genetic diseases [RCV002918159]|not provided [RCV002900513] |
Chr1:156593977 [GRCh38] Chr1:156563769 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.59C>A (p.Pro20Gln) |
single nucleotide variant |
not provided [RCV002595382] |
Chr1:156591863 [GRCh38] Chr1:156561655 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.658C>G (p.Pro220Ala) |
single nucleotide variant |
not provided [RCV003057851] |
Chr1:156593549 [GRCh38] Chr1:156563341 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.108G>T (p.Trp36Cys) |
single nucleotide variant |
not provided [RCV003087207] |
Chr1:156591912 [GRCh38] Chr1:156561704 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.664+18G>T |
single nucleotide variant |
not provided [RCV002938022] |
Chr1:156593573 [GRCh38] Chr1:156563365 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.192G>A (p.Glu64=) |
single nucleotide variant |
not provided [RCV003027775] |
Chr1:156592110 [GRCh38] Chr1:156561902 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.765C>T (p.Tyr255=) |
single nucleotide variant |
not provided [RCV002649293] |
Chr1:156593982 [GRCh38] Chr1:156563774 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.664+4C>G |
single nucleotide variant |
not provided [RCV003009191] |
Chr1:156593559 [GRCh38] Chr1:156563351 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.54_55delinsTC (p.Val19Leu) |
indel |
not provided [RCV002672132] |
Chr1:156591858..156591859 [GRCh38] Chr1:156561650..156561651 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.237C>G (p.Ser79Arg) |
single nucleotide variant |
not provided [RCV002770083]|not specified [RCV005239501] |
Chr1:156592155 [GRCh38] Chr1:156561947 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.717A>T (p.Ile239=) |
single nucleotide variant |
not provided [RCV002580019] |
Chr1:156593934 [GRCh38] Chr1:156563726 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.164C>T (p.Thr55Met) |
single nucleotide variant |
not provided [RCV003051425] |
Chr1:156591968 [GRCh38] Chr1:156561760 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.473G>A (p.Cys158Tyr) |
single nucleotide variant |
not provided [RCV003129091] |
Chr1:156592627 [GRCh38] Chr1:156562419 [GRCh37] Chr1:1q22 |
uncertain significance |
NAXE, (GGGCC)n REPEAT EXPANSION, PROMOTER |
microsatellite |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV004795361] |
|
pathogenic |
GRCh37/hg19 1q12-23.1(chr1:142535935-157648813)x3 |
copy number gain |
Chromosome 1q21.1 duplication syndrome [RCV003329522] |
Chr1:142535935..157648813 [GRCh37] Chr1:1q12-23.1 |
pathogenic |
NM_144772.3(NAXE):c.779del (p.Gly260fs) |
deletion |
not specified [RCV003331727] |
Chr1:156593991 [GRCh38] Chr1:156563783 [GRCh37] Chr1:1q22 |
uncertain significance |
NC_000001.11:g.156598254C>T |
single nucleotide variant |
not provided [RCV003409152] |
Chr1:156598254 [GRCh38] Chr1:156568046 [GRCh37] Chr1:1q22 |
uncertain significance |
GRCh37/hg19 1q22-23.1(chr1:156486831-156590431)x1 |
copy number loss |
not provided [RCV003483416] |
Chr1:156486831..156590431 [GRCh37] Chr1:1q22-23.1 |
uncertain significance |
NM_144772.3(NAXE):c.73C>T (p.Gln25Ter) |
single nucleotide variant |
NAXE-related disorder [RCV003403045] |
Chr1:156591877 [GRCh38] Chr1:156561669 [GRCh37] Chr1:1q22 |
likely pathogenic |
NM_144772.3(NAXE):c.182+11G>A |
single nucleotide variant |
not provided [RCV003547111] |
Chr1:156591997 [GRCh38] Chr1:156561789 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.184C>T (p.Gln62Ter) |
single nucleotide variant |
not provided [RCV003813753] |
Chr1:156592102 [GRCh38] Chr1:156561894 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.531T>C (p.Asp177=) |
single nucleotide variant |
not provided [RCV003672015] |
Chr1:156593422 [GRCh38] Chr1:156563214 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.27C>T (p.Gly9=) |
single nucleotide variant |
not provided [RCV003723570] |
Chr1:156591831 [GRCh38] Chr1:156561623 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.22C>T (p.Leu8=) |
single nucleotide variant |
not provided [RCV003734446] |
Chr1:156591826 [GRCh38] Chr1:156561618 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.540T>G (p.Tyr180Ter) |
single nucleotide variant |
not provided [RCV003728155] |
Chr1:156593431 [GRCh38] Chr1:156563223 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.665-19A>G |
single nucleotide variant |
not provided [RCV003821604] |
Chr1:156593863 [GRCh38] Chr1:156563655 [GRCh37] Chr1:1q22 |
benign |
NM_144772.3(NAXE):c.460T>C (p.Leu154=) |
single nucleotide variant |
not provided [RCV003821934] |
Chr1:156592614 [GRCh38] Chr1:156562406 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.862C>T (p.Gln288Ter) |
single nucleotide variant |
not provided [RCV003863258] |
Chr1:156594079 [GRCh38] Chr1:156563871 [GRCh37] Chr1:1q22 |
uncertain significance |
GRCh37/hg19 1q21.1-23.1(chr1:144368497-158992086)x3 |
copy number gain |
not specified [RCV003986717] |
Chr1:144368497..158992086 [GRCh37] Chr1:1q21.1-23.1 |
pathogenic |
NM_144772.3(NAXE):c.645C>T (p.Ala215=) |
single nucleotide variant |
not provided [RCV003722267] |
Chr1:156593536 [GRCh38] Chr1:156563328 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.234C>T (p.Phe78=) |
single nucleotide variant |
not provided [RCV003712442] |
Chr1:156592152 [GRCh38] Chr1:156561944 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.807G>A (p.Lys269=) |
single nucleotide variant |
not provided [RCV003862824] |
Chr1:156594024 [GRCh38] Chr1:156563816 [GRCh37] Chr1:1q22 |
likely benign |
GRCh37/hg19 1q21.3-23.1(chr1:154302443-156868186)x1 |
copy number loss |
not specified [RCV003986928] |
Chr1:154302443..156868186 [GRCh37] Chr1:1q21.3-23.1 |
pathogenic |
GRCh37/hg19 1q21.1-23.1(chr1:146577511-157155587)x3 |
copy number gain |
not specified [RCV003987261] |
Chr1:146577511..157155587 [GRCh37] Chr1:1q21.1-23.1 |
pathogenic |
NM_144772.3(NAXE):c.303C>T (p.Pro101=) |
single nucleotide variant |
not provided [RCV003710955] |
Chr1:156592376 [GRCh38] Chr1:156562168 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.183-6C>T |
single nucleotide variant |
NAXE-related disorder [RCV003893956] |
Chr1:156592095 [GRCh38] Chr1:156561887 [GRCh37] Chr1:1q22 |
likely benign |
GRCh37/hg19 1q22-23.2(chr1:155709113-159191078)x3 |
copy number gain |
not provided [RCV004577444] |
Chr1:155709113..159191078 [GRCh37] Chr1:1q22-23.2 |
likely pathogenic |
NM_144772.3(NAXE):c.589C>T (p.Arg197Trp) |
single nucleotide variant |
Inborn genetic diseases [RCV004470028] |
Chr1:156593480 [GRCh38] Chr1:156563272 [GRCh37] Chr1:1q22 |
uncertain significance |
NM_144772.3(NAXE):c.516+15T>C |
single nucleotide variant |
not provided [RCV005062607] |
Chr1:156592685 [GRCh38] Chr1:156562477 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.664+2T>A |
single nucleotide variant |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy [RCV005250480] |
Chr1:156593557 [GRCh38] Chr1:156563349 [GRCh37] Chr1:1q22 |
likely pathogenic |
NM_144772.3(NAXE):c.502dup (p.Glu168fs) |
duplication |
Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy, 1 [RCV005233249] |
Chr1:156592652..156592653 [GRCh38] Chr1:156562444..156562445 [GRCh37] Chr1:1q22 |
likely pathogenic |
NM_144772.3(NAXE):c.459A>G (p.Ala153=) |
single nucleotide variant |
not provided [RCV005080683] |
Chr1:156592613 [GRCh38] Chr1:156562405 [GRCh37] Chr1:1q22 |
likely benign |
NM_144772.3(NAXE):c.7_23dup (p.Leu10fs) |
duplication |
not provided [RCV005163239] |
Chr1:156591810..156591811 [GRCh38] Chr1:156561602..156561603 [GRCh37] Chr1:1q22 |
pathogenic |
NM_144772.3(NAXE):c.672C>T (p.Asp224=) |
single nucleotide variant |
not provided [RCV005194282] |
Chr1:156593889 [GRCh38] Chr1:156563681 [GRCh37] Chr1:1q22 |
likely benign |