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Gene: Trim2 (tripartite motif-containing 2) Rattus norvegicus
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Symbol: Trim2
Name: tripartite motif-containing 2
Description: Predicted to have ubiquitin protein ligase activity. Involved in regulation of neuron apoptotic process. Predicted to localize to the cytoplasm. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2R. Orthologous to human TRIM2 (tripartite motif containing 2); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase TRIM2; LOC361970; RING-type E3 ubiquitin transferase TRIM2; tripartite motif protein 2; tripartite motif-containing protein 2
Orthologs:
Homo sapiens (human) : TRIM2 (tripartite motif containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Trim2 (tripartite motif-containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim2 (tripartite motif containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM2 (tripartite motif containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim2 (tripartite motif containing 2)
Sus scrofa (pig) : TRIM2 (tripartite motif containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02183,145,096 - 183,223,819 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2183,145,089 - 183,213,228 (-)Ensembl
Rnor_5.02202,557,491 - 202,635,138 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42175,908,880 - 175,974,709 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12175,863,388 - 175,937,931 (-)NCBI
Celera2163,500,875 - 163,564,336 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310981
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.