Gene: Pkd2l2 (polycystin 2 like 2, transient receptor potential cation channel) Rattus norvegicus
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Symbol: Pkd2l2
Name: polycystin 2 like 2, transient receptor potential cation channel
Description: ENCODES a protein that exhibits calcium ion binding (inferred); INVOLVED IN calcium ion transmembrane transport (inferred); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN integral component of membrane (inferred); INTERACTS WITH bisphenol A; cocaine; 2,3,7,8-tetrachlorodibenzodioxine (ortholog)
AGR Description: Predicted to have calcium channel activity; predicted to be involved in detection of mechanical stimulus; predicted to localize to the membrane; orthologous to human PKD2L2 (polycystin 2 like 2, transient receptor potential cation channel).
Merged Description: Predicted to have calcium channel activity; predicted to be involved in detection of mechanical stimulus; predicted to localize to the membrane; orthologous to human PKD2L2 (polycystin 2 like 2, transient receptor potential cation channel); INTERACTS WITH bisphenol A; cocaine; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC291683; polycystic kidney disease 2-like 2
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01827,190,661 - 27,225,488 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01826,904,093 - 26,938,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41826,876,459 - 26,911,433 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11826,884,533 - 26,934,194 (+)NCBI
Celera1825,748,845 - 25,782,225 (+)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pkd2l2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310272
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.