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Gene: Prkcsh (protein kinase C substrate 80K-H) Rattus norvegicus
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Symbol: Prkcsh
Name: protein kinase C substrate 80K-H
Description: Predicted to have several functions, including calcium ion binding activity; ion channel binding activity; and protein kinase C binding activity. Predicted to be involved in several processes, including N-glycan processing; liver development; and negative regulation of neuron projection development. Predicted to localize to the glucosidase II complex. Human ortholog(s) of this gene implicated in liver disease and polycystic liver disease. Orthologous to human PRKCSH (protein kinase C substrate 80K-H); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 2,5-hexanedione; bisphenol A; Brodifacoum.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: glucosidase 2 subunit beta; LOC300445
Orthologs:
Homo sapiens (human) : PRKCSH (protein kinase C substrate 80K-H)  HGNC  Alliance
Mus musculus (house mouse) : Prkcsh (protein kinase C substrate 80K-H)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prkcsh (protein kinase C substrate 80K-H)
Pan paniscus (bonobo/pygmy chimpanzee) : PRKCSH (protein kinase C substrate 80K-H)
Canis lupus familiaris (dog) : PRKCSH (protein kinase C substrate 80K-H)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prkcsh (protein kinase C substrate 80K-H)
Sus scrofa (pig) : PRKCSH (protein kinase C substrate 80K-H)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0823,014,802 - 23,026,507 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl823,014,956 - 23,026,503 (+)Ensembl
Rnor_5.0823,069,586 - 23,081,291 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4821,107,041 - 21,144,270 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1821,106,881 - 21,117,476 (+)NCBI
Celera821,925,450 - 21,937,160 (+)NCBICelera
Cytogenetic Map8q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Prkcsh
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309628
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.