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Gene: Slc35c1 (solute carrier family 35 member C1) Rattus norvegicus
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Symbol: Slc35c1
Name: solute carrier family 35 member C1
Description: Predicted to have GDP-fucose transmembrane transporter activity and antiporter activity. Predicted to be involved in several processes, including GDP-fucose import into Golgi lumen; lipid glycosylation; and protein O-linked fucosylation. Predicted to localize to Golgi apparatus. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIc. Orthologous to human SLC35C1 (solute carrier family 35 member C1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GDP-fucose transporter 1; LOC311204; solute carrier family 35 (GDP-fucose transporter), member C1; solute carrier family 35, member C1
Orthologs:
Homo sapiens (human) : SLC35C1 (solute carrier family 35 member C1)  HGNC  Alliance
Mus musculus (house mouse) : Slc35c1 (solute carrier family 35, member C1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc35c1 (solute carrier family 35 member C1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC35C1 (solute carrier family 35 member C1)
Canis lupus familiaris (dog) : SLC35C1 (solute carrier family 35 member C1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc35c1 (solute carrier family 35 member C1)
Sus scrofa (pig) : SLC35C1 (solute carrier family 35 member C1)
Chlorocebus sabaeus (African green monkey) : SLC35C1 (solute carrier family 35 member C1)
Heterocephalus glaber (naked mole-rat) : Slc35c1 (solute carrier family 35 member C1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0381,361,080 - 81,369,010 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl381,361,056 - 81,368,442 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0388,065,131 - 88,073,052 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4376,847,879 - 76,854,414 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1376,744,291 - 76,759,292 (-)NCBI
Celera377,623,903 - 77,630,438 (-)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc35c1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309463
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.