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Gene: Ctu1 (cytosolic thiouridylase subunit 1) Rattus norvegicus
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Symbol: Ctu1
Name: cytosolic thiouridylase subunit 1
Description: Predicted to have tRNA binding activity. Predicted to be involved in tRNA wobble position uridine thiolation. Predicted to localize to the cytosolic tRNA wobble base thiouridylase complex. Orthologous to human CTU1 (cytosolic thiouridylase subunit 1); INTERACTS WITH bisphenol A; vinclozolin; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP binding domain 3; ATP-binding domain-containing protein 3; Atpbd3; cytoplasmic tRNA 2-thiolation protein 1; cytoplasmic tRNA adenylyltransferase 1; cytosolic thiouridylase subunit 1 homolog; cytosolic thiouridylase subunit 1 homolog (S. pombe); LOC292847; RGD1308740; similar to cDNA sequence BC005752
Orthologs:
Homo sapiens (human) : CTU1 (cytosolic thiouridylase subunit 1)  HGNC  Alliance
Mus musculus (house mouse) : Ctu1 (cytosolic thiouridylase subunit 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ctu1 (cytosolic thiouridylase subunit 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CTU1 (cytosolic thiouridylase subunit 1)
Canis lupus familiaris (dog) : CTU1 (cytosolic thiouridylase subunit 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ctu1 (cytosolic thiouridylase subunit 1)
Sus scrofa (pig) : CTU1 (cytosolic thiouridylase subunit 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0199,599,608 - 99,605,412 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01100,668,356 - 100,674,148 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4194,083,641 - 94,089,433 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1194,163,849 - 94,166,542 (+)NCBI
Celera188,384,549 - 88,390,341 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ctu1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308740
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.