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Gene: Nlrp5 (NLR family, pyrin domain containing 5) Rattus norvegicus
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Symbol: Nlrp5
Name: NLR family, pyrin domain containing 5
RGD ID: 1307446
Description: Predicted to have ATP binding activity. Predicted to be involved in several processes, including embryo implantation; regulation of RNA stability; and regulation of protein stability. Predicted to localize to several cellular components, including apical cortex; mitochondrion; and nucleolus. Orthologous to human NLRP5 (NLR family pyrin domain containing 5); INTERACTS WITH 1,2-dimethylhydrazine; bisphenol A; DDT.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC308325; NACHT, leucine rich repeat and PYD containing 5; NACHT, LRR and PYD domains-containing protein 5; Nalp5
Orthologs:
Homo sapiens (human) : NLRP5 (NLR family pyrin domain containing 5)  HGNC  Alliance
Mus musculus (house mouse) : Nlrp5 (NLR family, pyrin domain containing 5)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : NLRP5 (NLR family pyrin domain containing 5)
Canis lupus familiaris (dog) : NLRP5 (NLR family pyrin domain containing 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nlrp5 (NLR family pyrin domain containing 5)
Sus scrofa (pig) : NLRP5 (NLR family pyrin domain containing 5)
Chlorocebus sabaeus (African green monkey) : NLRP5 (NLR family pyrin domain containing 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0171,452,184 - 71,490,915 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl171,453,798 - 71,486,790 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0172,846,717 - 72,878,799 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,212,857 - 66,246,286 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1166,296,338 - 66,584,794 (-)NCBI
Celera165,519,807 - 65,552,240 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Nlrp5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307446
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.