Symbol: |
Trib1 |
Name: |
tribbles pseudokinase 1 |
RGD ID: |
12662117 |
Description: |
ENCODES a protein that exhibits transcription regulator inhibitor activity (ortholog); INVOLVED IN negative regulation of DNA-binding transcription factor activity (ortholog); negative regulation of JNK cascade (ortholog); regulation of MAP kinase activity (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Hypertriglyceridemia (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
tribbles homolog 1 |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 14,975,282 - 14,983,509 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 22,401,379 - 22,409,490 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 22,401,713 - 22,408,808 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Trib1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 14,975,282 - 14,983,509 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 22,401,379 - 22,409,490 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 22,401,713 - 22,408,808 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TRIB1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 125,430,358 - 125,438,403 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 125,430,358 - 125,438,403 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 126,442,600 - 126,450,645 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 126,511,745 - 126,519,827 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 126,511,744 - 126,519,824 | NCBI | | | | | Celera | 8 | 122,631,533 - 122,639,615 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24.13 | NCBI | | | | | HuRef | 8 | 121,766,406 - 121,774,484 (+) | NCBI | | HuRef | | | CHM1_1 | 8 | 126,482,807 - 126,490,884 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 126,563,804 - 126,571,849 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Trib1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 59,520,503 - 59,528,948 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 59,520,199 - 59,528,948 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 59,648,654 - 59,657,099 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 59,648,350 - 59,657,099 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 59,480,209 - 59,488,654 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 59,478,335 - 59,486,780 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 61,178,271 - 61,186,716 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | D1 | NCBI | | | | | cM Map | 15 | 25.41 | NCBI | | | | |
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Trib1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 93,096,001 - 93,102,547 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 91,206,579 - 91,213,126 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 91,206,579 - 91,214,731 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 93,092,395 - 93,098,946 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 95,293,606 - 95,300,157 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 95,125,539 - 95,132,086 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 99,954,492 - 99,961,026 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 99,954,492 - 99,961,026 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 100,534,391 - 100,540,925 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 96,442,239 - 96,448,785 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 96,477,093 - 96,482,772 (+) | NCBI | | | | | Celera | 7 | 87,967,385 - 87,973,931 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q33 | NCBI | | | | |
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Trib1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955461 | 494,003 - 501,990 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955461 | 494,003 - 501,928 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRIB1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 142,852,443 - 142,860,884 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 118,364,202 - 118,371,720 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 122,115,194 - 122,123,319 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 124,867,334 - 124,874,863 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 124,867,359 - 124,872,924 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TRIB1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 13 | 23,337,788 - 23,346,304 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 23,337,788 - 23,346,304 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 23,310,655 - 23,319,064 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 23,683,492 - 23,691,935 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 23,682,916 - 23,691,935 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 23,404,842 - 23,413,262 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 23,511,711 - 23,520,081 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 23,755,679 - 23,764,091 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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TRIB1 (Sus scrofa - pig) |
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TRIB1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 8 | 120,013,757 - 120,021,823 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 120,014,339 - 120,019,887 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 20,151,213 - 20,159,305 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Trib1 (Heterocephalus glaber - naked mole-rat) |
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Ensembl Acc Id: |
ENSSTOT00000023063 ⟹ ENSSTOP00000015980 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
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SpeTri2.0 Ensembl | NW_004936470 | 22,401,379 - 22,409,490 (-) | Ensembl |
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RefSeq Acc Id: |
XM_005316159 ⟹ XP_005316216 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
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HiC_Itri_2 | NW_024405303 | 14,975,282 - 14,983,509 (-) | NCBI | SpeTri2.0 | NW_004936470 | 22,401,713 - 22,408,808 (-) | NCBI |
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Sequence: |
CGGGCTGGAAGGAGTCGCAGCGCCGGCGTCAAGCCCGAAGCACCTTCCTGAGCAGAGCAGGGGACGTACGAAGCCGGGGCCGCCCTGGCCGCGGACGCGATGAGGGTTGGCCCCGTGCGCTCTGCCAT GAGCGGCGCCTCGCAGCCCGGCGGTCCGGCCCTGCTCCTCCCGGCCACTCGGGGCAATCCAGCCAAACGCCTGCTGGACGCCGACGACGCGGCGGCGGTGGCTGCCAAGTGCCCGCGCCTCTCGGAGT GCTCCAGTCCCCCGGACTACCTCAGCCCCCCCGGCTCGCCCTGCAGCCCACAGCCCCCTCCTACCGCTCCAGGGGCCGGCGGCGGCTCCGGGAGCGCACCGGGGCCCAGCCGCATAGCCGACTACCTG CTGCTGCCCCTAGCCGAGCGCGAGCATGTGTCCCGGGCGCTTTGCATCCACACCGGCCGCGAGCTGCGCTGCAAGGTGTTTCCCATTAAACACTACCAGGACAAAATCAGGCCTTACATCCAGCTGCC ATCGCACAGGAACATCACTGGCATCGTGGAAGTGATACTTGGGGAAACCAAGGCCTACGTGTTCTTCGAGAGAGACTTTGGGGACATGCACTCCTATGTGCGAAGCCGGAAGAGGCTGCGGGAAGAGG AGGCTGCCCGGCTCTTCAAGCAGATTGTGTCCGCCGTGGCCCACTGCCACCAGTCGGCTATTGTGCTGGGGGACCTGAAGCTTAGGAAGTTCGTCTTCTCCACGGGGGAGAGAACCCAGCTCCGACTG GAAAGTCTGGAAGATACGCACATCATCAAGGGCGAAGATGATGCTTTGTCAGACAAGCATGGCTGCCCAGCTTACGTGAGCCCCGAGATCCTCAACACCACCGGGACCTACTCCGGAAAGGCGGCGGA CGTTTGGAGCCTCGGGGTGATGCTCTACACCCTTTTGGTCGGACGATACCCCTTCCATGACTCGGACCCTAGTGCTCTCTTCTCCAAAATCCGACGCGGACAGTTCTGCATTCCCGACCACATTTCCC CCAAAGCCAGGTGCCTCATTCGCAGCCTCCTGAGACGGGAGCCTTCCGAGAGACTCACTGCTCCTGAGATCTTACTCCATCCCTGGTTTGAGTCTGCCCTGGAGCCTGGGTACGTTGACTCAGAAATA GGAACTTCAGACCAGATTGTTCCAGAGTACGAGGAGGACAGTGACATGAGTTCCTTCTTCTGCTAATCCCAAAAACCTCAGAAACCTCATAATTCTCACTCATGGCATTTCCATTTCTCAAGATGGAC GGGCCCCTCTGGCACGGTGCCAGCCAGAAGTCCGGACGGAGGGCACCAAGGTTGTCTCCGCAGAACTCACCGTGGAACCCTGTCTCACAGTGGGGGAGGAGCGACTGTTGATTTGAGCAGCACGACCC TCTGACTTAACTGCAGAGTCGTTCCCTTCTTTACCAACTACCCTCAACTCTGTCTTTGTCAGATCTGGGGCGTTCTGTGTCTTTCAAAGGTGGCAAAGAGGGTAGCGTGGACATCCCACGCTGTGTGG TCAAGTGTCATGAACTTGAACATTCACATGGGAAAGGCAGGAAGTCACCCAGTGGCATTTTGGGCAATAACCATGTTTTAATGGGGTGGCAGATCACTTGGGTCAATAAGCCTGCCATCTTAGAAAAA AACTCCTTCGTAGCTGGACTTGTCGCTGCAGTTTCTCCCATCAGAAAGCCCGCTCTTGCTCTTGGTTTGTTGCGACATCTGTCTTTGCCTCATGGTCACACTTAACCAACAACTCTGCTCTGTTGTCT GAGCAGACTGAGGAGCTCAGGAGCCTGCCTGAACCCTGACCCTACTCTACTCCTGCCCTGCTCCCATCTCACATGCAATAATGCCTTGTCCTTGACCTTGAAACTTGCCCCCTGCAGCTATGAAAGTA CTTGCCAGCTAATCGTTGAAAAGTGCAGAAAAAATGCGGAACTCTTGGCTATTTCAGAACTCTGAGCTCCAGTAGAGACTGCCATTAAAAAACAAACAAAAAAACCAATTTGATCACTTGGAAACCTT TGGCATTTTCAGTTTCCTTCTAGTGTGCTGGGGCTTAGCCTTTAATTTTCCCCCCACAAGATCTCAGGGTGGAACATGTTGTCCAGGAAGAGAAAGGAGACTCCCCACCCTGCTCTCCCAGGAGCAAA GGGTAAACCTCTTTGTGCTTTAAAGAAAGTGAATTTTGGACAGCATTAGGATTCCCAGACTAAGTTCCAGAATGATACTGTGCCCCGCCCTGTGTGGGCATCCTGGGTGCACTTGGGGTTTTGCGAGG TGGGTTGTTGGTACAAGTGGTGTGGTCTCTGACTACACATCTGTGCAGCCGGCTGCTGGGGTGGAATAGTGAGCCCCCAGGTATTTCAAGTTGGAAGGACTTTGACAATCATCCGATCCAACTTCTCC TCGCTGCCACCTCCCACTGCAGAAATCCTCACCTTCAGCTTCTTTCCCAGGTGAGAATCCAACCTCTGTTTGAATGCTTCTAGAGACAGAAACTCACTCCCTACAAAAGGTAGAACTTCACGGAGAGA CTGCAACTTGCATTAAAAAACAAGGACAGATGAAGAGTCAGTCGCTGTCTCAGACGGTGCCGAAATCAGGTGGATAAACGGGTAAACAAATATACTGTATTTGAAGAAATGGCACAAACCAGGCAGGC ATCTTCAAGGGCTACGCCTACGCGAACTACTAACCTGCATTGTAAGAATGCTGTGTATACCTCATGTACTGTGTACTCTGTACATATATTTTACCTTTTATACCTA
hide sequence
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RefSeq Acc Id: |
XP_005316216 ⟸ XM_005316159 |
- UniProtKB: |
I3MV35 (UniProtKB/TrEMBL) |
- Sequence: |
MRVGPVRSAMSGASQPGGPALLLPATRGNPAKRLLDADDAAAVAAKCPRLSECSSPPDYLSPPGSPCSPQPPPTAPGAGGGSGSAPGPSRIADYLLLPLAEREHVSRALCIHTGRELRCKVFPIKHYQ DKIRPYIQLPSHRNITGIVEVILGETKAYVFFERDFGDMHSYVRSRKRLREEEAARLFKQIVSAVAHCHQSAIVLGDLKLRKFVFSTGERTQLRLESLEDTHIIKGEDDALSDKHGCPAYVSPEILNT TGTYSGKAADVWSLGVMLYTLLVGRYPFHDSDPSALFSKIRRGQFCIPDHISPKARCLIRSLLRREPSERLTAPEILLHPWFESALEPGYVDSEIGTSDQIVPEYEEDSDMSSFFC
hide sequence
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Ensembl Acc Id: |
ENSSTOP00000015980 ⟸ ENSSTOT00000023063 |
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