Symbol:
Ndufs4
Name:
NADH:ubiquinone oxidoreductase subunit S4
RGD ID:
12624650
Description:
ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN adult behavior (ortholog); adult walking behavior (ortholog); brain development (ortholog); ASSOCIATED WITH brain disease (ortholog); COVID-19 (ortholog); developmental coordination disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 204,892,598 - 204,995,733 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936480 13,827,743 - 13,932,238 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936480 13,829,093 - 13,932,202 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Ndufs4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 204,892,598 - 204,995,733 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936480 13,827,743 - 13,932,238 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936480 13,829,093 - 13,932,202 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
NDUFS4 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 5 53,560,639 - 53,683,338 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 5 53,560,633 - 53,683,338 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 5 52,856,469 - 52,979,168 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 52,892,242 - 53,014,925 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 5 52,892,241 - 53,014,924 NCBI Celera 5 49,810,070 - 49,932,765 (+) NCBI Celera Cytogenetic Map 5 q11.2 NCBI HuRef 5 49,829,192 - 49,951,782 (+) NCBI HuRef CHM1_1 5 52,859,382 - 52,982,064 (+) NCBI CHM1_1 T2T-CHM13v2.0 5 54,388,486 - 54,511,162 (+) NCBI T2T-CHM13v2.0
Ndufs4 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 13 114,424,331 - 114,524,630 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 13 114,424,331 - 114,524,794 (-) Ensembl GRCm39 Ensembl GRCm38 13 114,287,795 - 114,388,094 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 13 114,287,795 - 114,388,258 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 13 115,078,003 - 115,178,302 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 13 115,409,528 - 115,508,921 (-) NCBI MGSCv36 mm8 Celera 13 118,620,039 - 118,721,271 (-) NCBI Celera Cytogenetic Map 13 D2.2 NCBI cM Map 13 64.12 NCBI
Ndufs4 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 47,684,420 - 47,794,914 (-) NCBI GRCr8 mRatBN7.2 2 45,951,327 - 46,061,829 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 45,951,313 - 46,061,846 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 53,055,093 - 53,165,153 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 51,113,456 - 51,223,515 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 45,988,050 - 46,102,968 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 46,372,488 - 46,476,162 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 46,372,518 - 46,476,203 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 65,403,197 - 65,515,243 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 45,839,236 - 46,479,619 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 2 41,712,356 - 41,822,320 (-) NCBI Celera Cytogenetic Map 2 q14 NCBI
Ndufs4 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955446 13,764,907 - 13,864,824 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955446 13,764,907 - 13,864,824 (-) NCBI ChiLan1.0 ChiLan1.0
NDUFS4 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 4 60,256,021 - 60,378,662 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 5 58,409,645 - 58,532,287 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 5 60,344,363 - 60,467,008 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 5 61,966,124 - 62,088,388 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 5 61,966,124 - 62,088,375 (-) Ensembl panpan1.1 panPan2
NDUFS4 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 4 61,613,580 - 61,727,219 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 4 61,613,589 - 61,727,205 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 4 61,379,036 - 61,492,669 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 4 62,107,235 - 62,231,743 (-) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 4 61,884,352 - 61,997,681 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 4 62,012,344 - 62,126,203 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 4 62,529,496 - 62,643,162 (-) NCBI UU_Cfam_GSD_1.0
NDUFS4 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 16 32,874,450 - 32,987,828 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 16 32,874,418 - 32,985,638 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 16 34,963,225 - 34,992,577 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
NDUFS4 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 4 49,851,012 - 49,967,533 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 4 49,851,014 - 49,967,590 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666082 1,152,990 - 1,272,340 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Ndufs4 (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000005329 ⟹ ENSSTOP00000004777
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936480 13,827,743 - 13,932,238 (-) Ensembl
RefSeq Acc Id:
XM_005319642 ⟹ XP_005319699
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024407213 204,892,598 - 204,995,733 (-) NCBI SpeTri2.0 NW_004936480 13,829,093 - 13,932,202 (-) NCBI
Sequence:
CCCATCCTGCCATTTGCCTGCAGCAAGATGGCGGCTGTCTTAATGTCAGTGGCGCTGAAGCAGGCGTTATTGGGGAGAAGAGCAGCGGCTACAGCTGCTGTTTCCGTTTCCAGGGTTCAAACCAGATT GTTGAGCACATCCACATGGAGGCTGGCACAGGACCAAACTCGAGACACTCAACTTATAACAGTTGATGAAAAATTGGATATCACTACATTAACTGGTGTTCCAGAAGAGCATATCAAAACTAGAAAAG TCAGGATCTTTGTTCCTGCTCGAAATAACATGCAATCTGGAGTAAACAACACAAAGAAATGGAGGATGGAGTTTGATACCAGGGAACGATGGGAAAATCCTTTGATGGGTTGGGCATCAACGGCTGAT CCTTTGTCCAATATGGTTCTAACCTTCAGTACTAAAGAAGATGCAGCTGCCTTTGCAGAAAAAAATGGCTGGAGCTATGACATTGAAGAGAGAAAAGTTCCGAAACCCAAGTCCAAGTCTTATGGTGC AAACTTTTCTTGGAACAAAAGAACAAGAGTATCCACAAAATAGATTGGCACTGACTGTATCTCTACTTGACTGTGAATAAAGTCAGCTGTGCAGTATTTATAGCCCATGTATACATCTCTTAATCACC TAATAAATTTGACCTTAAAATTATAGATAGA
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RefSeq Acc Id:
XM_040272191 ⟹ XP_040128125
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024407213 204,892,598 - 204,995,412 (-) NCBI
RefSeq Acc Id:
XP_005319699 ⟸ XM_005319642
- Peptide Label:
isoform X2
- UniProtKB:
I3M5W5 (UniProtKB/TrEMBL)
- Sequence:
MAAVLMSVALKQALLGRRAAATAAVSVSRVQTRLLSTSTWRLAQDQTRDTQLITVDEKLDITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWRMEFDTRERWENPLMGWASTADPLSNMVLTF STKEDAAAFAEKNGWSYDIEERKVPKPKSKSYGANFSWNKRTRVSTK
hide sequence
RefSeq Acc Id:
XP_040128125 ⟸ XM_040272191
- Peptide Label:
isoform X1
Ensembl Acc Id:
ENSSTOP00000004777 ⟸ ENSSTOT00000005329