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Gene: Tspan12 (tetraspanin 12) Ictidomys tridecemlineatus

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Symbol:

Tspan12

Name:

tetraspanin 12

RGD ID:

12575966

Description:

ENCODES a protein that exhibits Wnt receptor activity (ortholog); INVOLVED IN angiogenesis (inferred); cell surface receptor signaling pathway (inferred); maintenance of blood-brain barrier (inferred); ASSOCIATED WITH Disease Susceptibility (ortholog); early myoclonic encephalopathy (ortholog); exudative vitreoretinopathy (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tetraspanin-12

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TSPAN12 (tetraspanin 12)	NCBI	Ortholog
Mus musculus (house mouse):	Tspan12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tspan12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tspan12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TSPAN12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TSPAN12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TSPAN12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TSPAN12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tspan12 (tetraspanin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	47,865,412 - 47,938,462 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936605	4,265,316 - 4,338,526 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936605	4,265,475 - 4,338,518 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Tspan12	Squirrel	early myoclonic encephalopathy		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Early myoclonic encephalopathy	ClinVar	PMID:28492532
Tspan12	Squirrel	exudative vitreoretinopathy		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Familial exudative vitreoretinopathy	ClinVar	PMID:25250762\|PMID:25741868\|PMID:28041643\|PMID:28492532
Tspan12	Squirrel	exudative vitreoretinopathy 5		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Exudative vitreoretinopathy 5 \| ClinVar Annotator: match by term: TSPAN12-related more ...	ClinVar	PMID:15665352\|PMID:20159111\|PMID:20159112\|PMID:21334594\|PMID:21552475\|PMID:22427576\|PMID:25250762\|PMID:25352738\|PMID:25741868\|PMID:28002565\|PMID:28041643\|PMID:28492532\|PMID:28494495\|PMID:31106028\|PMID:31987760\|PMID:34738848
Tspan12	Squirrel	fundus dystrophy		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Retinal dystrophy	ClinVar	PMID:17576681\|PMID:20159112\|PMID:21334594\|PMID:25741868\|PMID:27316669\|PMID:28492532\|PMID:9536098
Tspan12	Squirrel	genetic disease		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:28492532
Tspan12	Squirrel	Norrie disease		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Atrophia bulborum hereditaria	ClinVar	PMID:25250762\|PMID:25741868
Tspan12	Squirrel	optic atrophy		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Optic atrophy	ClinVar	PMID:25741868
Tspan12	Squirrel	Persistent Hyperplastic Primary Vitreous, Autosomal Recessive		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Persistent hyperplastic primary vitreous, autosomal recessive	ClinVar	PMID:25250762\|PMID:25741868
Tspan12	Squirrel	pleomorphic xanthoastrocytoma		ISO	RGD:1322379	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Tspan12	Squirrel	Disease Susceptibility		ISO	RGD:1322379	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:20130021

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Tspan12	Squirrel	exudative vitreoretinopathy 5		ISO	RGD:1322379	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Tspan12	Squirrel	angiogenesis	involved_in	IEA	UniProtKB-KW:KW-0037	150520179		UniProt	GO_REF:0000043
Tspan12	Squirrel	cell surface receptor signaling pathway	involved_in	IEA	UniProtKB:Q8BKT6\|ensembl:ENSMUSP00000031678	150520179		Ensembl	GO_REF:0000107
Tspan12	Squirrel	maintenance of blood-brain barrier	acts_upstream_of_or_within	IEA	UniProtKB:Q8BKT6\|ensembl:ENSMUSP00000031678	150520179		Ensembl	GO_REF:0000107
Tspan12	Squirrel	Norrin signaling pathway	acts_upstream_of_or_within	IEA	UniProtKB:Q8BKT6\|ensembl:ENSMUSP00000031678	150520179		Ensembl	GO_REF:0000107
Tspan12	Squirrel	regulation of angiogenesis	involved_in	IEA	UniProtKB:Q8BKT6\|ensembl:ENSMUSP00000031678	150520179		Ensembl	GO_REF:0000107
Tspan12	Squirrel	retina layer formation	involved_in	IEA	UniProtKB:Q8BKT6\|ensembl:ENSMUSP00000031678	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Tspan12	Squirrel	membrane	located_in	IEA	UniRule:UR000049408	150520179		UniProt	GO_REF:0000104
Tspan12	Squirrel	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
Tspan12	Squirrel	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	150520179		UniProt	GO_REF:0000044
Tspan12	Squirrel	membrane	located_in	IEA	InterPro:IPR000301\|InterPro:IPR008952\|InterPro:IPR018499\|InterPro:IPR018503	150520179		InterPro	GO_REF:0000002
Tspan12	Squirrel	plasma membrane	located_in	IEA	UniProtKB:Q8BKT6\|ensembl:ENSMUSP00000031678	150520179		Ensembl	GO_REF:0000107
Tspan12	Squirrel	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	150520179		UniProt	GO_REF:0000044
Tspan12	Squirrel	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	150520179		UniProt	GO_REF:0000043
Tspan12	Squirrel	plasma membrane	located_in	IEA	PANTHER:PTN000445614	150520179		TreeGrafter	GO_REF:0000118

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Tspan12	Squirrel	protein binding	enables	ISO	UniProtKB:Q12800	9068941	PMID:25416956	IntAct	PMID:25416956
Tspan12	Squirrel	protein binding	enables	ISO	UniProtKB:A2RU14\|UniProtKB:O00155\|UniProtKB:O14880\|UniProtKB:O60883\|UniProtKB:O95674\|UniProtKB:P24593\|UniProtKB:P54852\|UniProtKB:Q01453\|UniProtKB:Q4LDR2\|UniProtKB:Q6ZP80\|UniProtKB:Q8N8N0\|UniProtKB:Q96AA3\|UniProtKB:Q9BQA9\|UniProtKB:Q9BVK8\|UniProtKB:Q9NV12\|UniProtKB:Q9NZG7\|UniProtKB:Q9P0N8\|UniProtKB:Q9UNK0\|UniProtKB:Q9Y6I9	9068941	PMID:32296183	IntAct	PMID:32296183
Tspan12	Squirrel	protein binding	enables	ISO	UniProtKB:O14672\|UniProtKB:O14672-PRO_0000029067	9068941	PMID:19587294	IntAct	PMID:19587294
Tspan12	Squirrel	Wnt receptor activity	NOT\|enables	ISO	RGD:1551712	9068941	PMID:19837033	UniProt	PMID:19837033

PMID:22301074	PMID:30032202

Tspan12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	47,865,412 - 47,938,462 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936605	4,265,316 - 4,338,526 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936605	4,265,475 - 4,338,518 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSPAN12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	120,787,320 - 120,858,335 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	120,787,320 - 120,858,402 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	120,427,374 - 120,498,198 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	120,214,610 - 120,285,413 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	120,021,325 - 120,092,128	NCBI
Celera	7	115,236,877 - 115,307,696 (-)	NCBI		Celera
Cytogenetic Map	7	q31.31	NCBI
HuRef	7	114,790,536 - 114,861,356 (-)	NCBI		HuRef
CHM1_1	7	120,360,669 - 120,431,498 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	122,102,649 - 122,173,766 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	119,822,450 - 119,893,269 (-)	NCBI

Tspan12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	21,771,390 - 21,879,557 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	21,771,394 - 21,852,514 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	21,771,391 - 21,879,596 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	21,771,395 - 21,852,515 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	21,721,395 - 21,802,515 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	21,721,396 - 21,802,516 (-)	NCBI		MGSCv36	mm8
Celera	6	21,825,255 - 21,906,372 (-)	NCBI		Celera
Cytogenetic Map	6	A3.1	NCBI
cM Map	6	8.73	NCBI

Tspan12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	51,279,562 - 51,355,030 (-)	NCBI		GRCr8
mRatBN7.2	4	50,313,768 - 50,389,246 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	50,313,772 - 50,389,246 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	55,292,888 - 55,371,672 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	51,213,970 - 51,292,754 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	49,642,270 - 49,717,776 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	48,852,823 - 48,953,240 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	48,852,827 - 48,928,372 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	48,641,401 - 48,715,044 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	48,084,836 - 48,164,956 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	48,315,410 - 48,395,530 (-)	NCBI
Celera	4	45,518,037 - 45,592,649 (-)	NCBI		Celera
Cytogenetic Map	4	q22	NCBI

Tspan12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955479	2,570,937 - 2,635,857 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955479	2,570,937 - 2,636,884 (-)	NCBI	ChiLan1.0	ChiLan1.0

TSPAN12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	157,651,672 - 157,722,565 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	9,661,929 - 9,732,821 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	112,790,606 - 112,861,730 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	125,478,472 - 125,549,091 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	125,478,472 - 125,549,091 (-)	Ensembl	panpan1.1		panPan2

TSPAN12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	58,941,658 - 59,005,507 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	58,941,551 - 59,005,463 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	58,358,992 - 58,423,887 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	58,977,034 - 59,042,565 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	58,976,838 - 59,041,886 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	59,071,214 - 59,136,845 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	58,694,898 - 58,759,920 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	59,073,370 - 59,138,262 (-)	NCBI		UU_Cfam_GSD_1.0

TSPAN12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	26,046,703 - 26,112,918 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	26,046,645 - 26,112,924 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	27,651,287 - 27,717,509 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TSPAN12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	89,609,229 - 89,680,446 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	89,609,124 - 89,680,297 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	13,900,003 - 13,970,881 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tspan12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624783	15,226,852 - 15,285,931 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624783	15,226,927 - 15,285,931 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005333953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000000207 ⟹ ENSSTOP00000000183

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936605	4,266,784 - 4,337,274 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000036996 ⟹ ENSSTOP00000032657

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936605	4,265,316 - 4,338,526 (+)	Ensembl

RefSeq Acc Id:

XM_005333953 ⟹ XP_005334010

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	47,865,412 - 47,938,462 (-)	NCBI
SpeTri2.0	NW_004936605	4,265,475 - 4,338,518 (+)	NCBI

Sequence:

show sequence

AGAGTTTGTGCAGCTGGCCCTGGCCGCCACTGCTGCCTTGTCCGGACTTGGCGAGGACTTGGGAGGGACAGCGGCGCTGGGAGGTGGCTTAGCAGAGAGACTTTCCAGCAACTGCTGCCCAGGACTCT
TTTTTTTTTTTTTTTTCCTTTTTCCCAGGAGGCGGCGACGGCGGCGGGGGGAGAGGAAGAGAAGGAAGCGTCTGCAGCTTGAGTCAATGCAGCCCTTCGGCTCTCCGGGAATAGCGTTCCAACCCCGA
TGAGTCCTCTCCGTGCGTCCCCAACTATCCCCGGGAGGGAGTGGGGCACGGAGCCCAGCGCCGACGACCGCTGCTACTTTGCCTGTGGGAGTAGAATGTGGTGAAAGGATGGGGCTTCTCCCTCCTGA
GGCTCACAATGGCCAGAGAAGATTCCGTGAAGTGCTTGCGCTGCTTGCTGTACGCCCTCAATTTGCTCTTTTGGTTAATGTCCATCAGTGTGTTGGCAGTTTCTGCTTGGATGAGGGACTACCTGAAT
AACGTTCTCACTTTAACTGCAGAAACAAGGGTGGAGGAGGCAGTCATCTTGACTTACTTTCCTGTGGTTCATCCGGTCATGATTGCTGTGTGCTGTTTCCTTATCATTGTGGGGATGTTGGGATATTG
TGGAACAGTGAAGAGAAATCTGTTGCTTCTTGCATGGTACTTTGGAAGTCTCCTTGTCATTTTCTGCGTAGAACTGGCTTGTGGTGTTTGGACATATGAGCAGGAACTTGTGGTACCAGTACAGTGGT
CAGATATGGTCACTTTGAAAGCCAGAATGACAAACTACGGCTTACCTAGATATCGGTGGCTTACTCATGCTTGGAATTTTTTTCAGAGAGAGTTTAAGTGCTGTGGAGTGGTGTATTTCACTGACTGG
TTAGAAATGACTGAGATGGACTGGCCTCCGGATTCCTGCTGTGTCAGGGAATTCCCAGGATGCTCCAAACAGGCCCACCAGCAAGATCTCAGTGACCTTTATCAAGAGGGTTGTGGGAAGAAAATGTA
TTCTTTTCTGAGAGGAACCAAACAACTGCAAGTACTAAGATTTCTAGGGATCTCTATTGGAGTGACACAAATCCTGGCTATGATTCTCACCATTACTCTGCTCTGGGCTCTGTATTATGACAGAAGAG
AGCCAGGGACAGACCAAATGATGTCCCTAAAGAATGACAACTCTCAGCACCTGTCATGTCACTCAGTAGAACTGTTGAAACCAAGTCTTTCAAGGATTTTTGAACACACATCCATGGCCAACAGCTTT
AATACACACTTTGAGATGGAAGAATTATAAAAAATGTCAAAGAAAGAATCAAACTTGTTTTATGGGACTTGTGAATTTTTGATTACAGTTTTTTGCTTCAGAAATTTGCAGATGTAAAAAATGTCTAA
GTATATGATTTTCTACTCTTTAAAATTGAGAGAAAAAGTTTCTTACGTCACCACCTGGACAATAACTGATGCCCTTTACGATGCTAAGGACAGATCTAATAGCCACTTTATAGCTCTTATAAGATTTT
TACTGAATACAGTTATGTTCTGAGGTAGTATGATTTGGTTGGCATTTCTGCATCCATGTAAATGAGACATATATATTCAGATTAGAGCTACATAAAGGTTGATTTTCTTCCACTGGCTAGTATATAAT
GTATCAATTAACTGCTAACATAGGAAGTTAAACAGTACTAATGACTTGTATTATTTGGTAATGTATTCTTTTGAGGGTGACTAGATTATACATATGAACATTTCAAATTGGTGTCAACCGAATTGTGA
TTTTTGCTGGTTATTGAAATGTTCTTAACATCTATAAGAGCAAACACATTGTCTTTAACTGATCAGGGAAATATGTGTATATAAATCTGTTCTAAGTTTGTATAATTCAGTAGATTTCAATTCTTATA
ATGTTAAGAGTAACAATTGTGAGAAGGATAAATTTGTCTTGTATAGCACCATTATTTTTTAGTCTTTCCTGTTCATAGAGCTTTTAAGTTCTGTCTTGAGTCTACATTATAACTGTTAATTTAAGTAC
TTAACCACTAATTTTGAAAATTACCAGTGTGATACATAGGAATCATTTTAATTCTGAATACAATCTGGTCTCTAGGAAGTATTAACAAGAAAATTCACGCATAATTTAGTTGATTTAGTAAAGACTTG
GATGCCATTTTCTTTGAAGCAAAGATTCTTTTTGACAATGAACATGCTTTAAAAGAGCTTATATTTGCCTTTTCCAAAAAGAAGTAACAGTCTTCAAGTCAATATAATTTTACAGAAAGTAATTTTCT
TTGTCCCCAGAAAAATGCCTGTAAGAAACATTAAAATAAGTGACAATTTAACAAGAGATTATCTTTGCTTTATTTCACTGATTAATATACTATGGTGAATTACACAGATTATTAATTTTTTACAAAGG
TAAAATATATTTATTTGAAATGGGAAAAGTGCATTTTACTGTATTTTGTGTATTATGTTGTTTATTTCAGATTATGGAAAGAAAATTAAAACAACTGTCAATAAATATTTTCTAGAGAGTAA

hide sequence

RefSeq Acc Id:

XM_040291598 ⟹ XP_040147532

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	47,865,412 - 47,937,911 (-)	NCBI


Protein RefSeqs	XP_005334010	(Get FASTA)	NCBI Sequence Viewer
	XP_040147532	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000000183.3
	ENSSTOP00000032657.1
GenBank Protein	KAG3277706	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005334010 ⟸ XM_005333953

- UniProtKB:

A0A287DGL5 (UniProtKB/TrEMBL), I3LW58 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAREDSVKCLRCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGSLLVIFCVELACGVWTYEQELVVPVQWSDM
VTLKARMTNYGLPRYRWLTHAWNFFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQQDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRREPG
TDQMMSLKNDNSQHLSCHSVELLKPSLSRIFEHTSMANSFNTHFEMEEL

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RefSeq Acc Id:	XP_040147532 ⟸ XM_040291598
- UniProtKB:	A0A287DGL5 (UniProtKB/TrEMBL), I3LW58 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000000183 ⟸ ENSSTOT00000000207

Ensembl Acc Id:

ENSSTOP00000032657 ⟸ ENSSTOT00000036996

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000000209	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000000207.3	UniProtKB/TrEMBL
	ENSSTOT00000036996.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1450.10	UniProtKB/TrEMBL
InterPro	Tetraspanin/Peripherin	UniProtKB/TrEMBL
	Tetraspanin_animals	UniProtKB/TrEMBL
	Tetraspanin_CS	UniProtKB/TrEMBL
	Tetraspanin_EC2_sf	UniProtKB/TrEMBL
NCBI Gene	Tspan12	ENTREZGENE
PANTHER	PTHR19282	UniProtKB/TrEMBL
	TETRASPANIN-12	UniProtKB/TrEMBL
Pfam	Tetraspanin	UniProtKB/TrEMBL
PIRSF	Tetraspanin	UniProtKB/TrEMBL
PRINTS	TMFOUR	UniProtKB/TrEMBL
PROSITE	TM4_1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48652	UniProtKB/TrEMBL
UniProt	A0A287DGL5	ENTREZGENE, UniProtKB/TrEMBL
	I3LW58	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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