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Gene: Pals1 (protein associated with LIN7 1, MAGUK p55 family member) Ictidomys tridecemlineatus

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Symbol:

Pals1

Name:

protein associated with LIN7 1, MAGUK p55 family member

RGD ID:

12513550

Description:

ENCODES a protein that exhibits identical protein binding (inferred); protein domain specific binding (inferred); INVOLVED IN myelin assembly (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); Leber congenital amaurosis (ortholog); Leber congenital amaurosis 13 (ortholog); FOUND IN protein-containing complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

MAGUK p55 subfamily member 5; membrane palmitoylated protein 5; membrane palmitoylated protein 5, transcript variant X1; membrane palmitoylated protein 5, transcript variant X2; membrane palmitoylated protein 5, transcript variant X3; Mpp5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	63,464,311 - 63,554,909 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	10,636,670 - 10,725,647 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	10,636,762 - 10,729,060 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pals1	Squirrel	cerebral palsy		ISO	PALS1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cerebral palsy	ClinVar	PMID:33073849
Pals1	Squirrel	Leber congenital amaurosis 13		ISO	PALS1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Leber congenital amaurosis 13	ClinVar	PMID:28492532
Pals1	Squirrel	Neurodevelopmental Disorders		ISO	PALS1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868 and PMID:33073849
Pals1	Squirrel	Rett Syndrome, Atypical		ISO	PALS1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Atypical Rett syndrome	ClinVar	PMID:25741868 and PMID:33073849

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pals1	Squirrel	Leber congenital amaurosis		ISO	Pals1 (Mus musculus)	9068941		MouseDO

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pals1	Squirrel	central nervous system neuron development	involved_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	cerebral cortex development	involved_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	gene expression	acts_upstream_of_or_within	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	morphogenesis of an epithelial sheet	involved_in	IEA	UniProtKB:Q8N3R9 and ensembl:ENSP00000261681	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	myelin assembly	involved_in	ISO	Pals1 (Rattus norvegicus)	9068941	PMID:20237282	BHF-UCL	PMID:20237282 and REF_RGD_ID:8554674
Pals1	Squirrel	peripheral nervous system myelin maintenance	involved_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	plasma membrane organization	acts_upstream_of_or_within	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	protein localization	acts_upstream_of_or_within	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	protein localization to myelin sheath abaxonal region	involved_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	protein localization to plasma membrane	involved_in	ISO	Pals1 (Rattus norvegicus)	9068941	PMID:20237282	BHF-UCL	PMID:20237282 and REF_RGD_ID:8554674
Pals1	Squirrel	regulation of transforming growth factor beta receptor signaling pathway	involved_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pals1	Squirrel	adherens junction	located_in	IEA	UniProtKB:Q8N3R9 more ...	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	anchoring junction	located_in	IEA	UniProtKB-KW:KW-0965	150520179		UniProt	GO_REF:0000043
Pals1	Squirrel	apical part of cell	is_active_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	apical plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0015	150520179		UniProt	GO_REF:0000044
Pals1	Squirrel	bicellular tight junction	located_in	IEA	UniProtKB-SubCell:SL-0265	150520179		UniProt	GO_REF:0000044
Pals1	Squirrel	bicellular tight junction	located_in	IEA	UniProtKB-KW:KW-0796	150520179		UniProt	GO_REF:0000043
Pals1	Squirrel	cytoplasm	located_in	IEA	UniProtKB:Q8N3R9 and ensembl:ENSP00000261681	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	lateral loop	located_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	myelin sheath adaxonal region	located_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	150520179		UniProt	GO_REF:0000044
Pals1	Squirrel	plasma membrane	located_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	protein-containing complex		ISO	Pals1 (Rattus norvegicus)	9068941		RGD	PMID:18621709 and REF_RGD_ID:5131983
Pals1	Squirrel	protein-containing complex	part_of	IEA	UniProtKB:Q8N3R9 and ensembl:ENSP00000261681	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	Schmidt-Lanterman incisure	located_in	IEA	UniProtKB:Q9JLB2 and ensembl:ENSMUSP00000080683	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pals1	Squirrel	identical protein binding	enables	IEA	UniProtKB:Q8N3R9 and ensembl:ENSP00000261681	150520179		Ensembl	GO_REF:0000107
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:Q9GZV5	9068941	PMID:21145499	UniProt	PMID:21145499
Pals1	Squirrel	protein binding	enables	ISO	PR:Q8K371 more ...	9068941	PMID:18824598	MGI	PMID:18824598
Pals1	Squirrel	protein binding	enables	ISO	PR:Q9CZN4	9068941	PMID:24498314	MGI	PMID:24498314
Pals1	Squirrel	protein binding	enables	ISO	PR:Q8VBX6	9068941	PMID:15316081 and PMID:19506035	MGI	PMID:15316081 and PMID:19506035
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:Q63ZW7 and UniProtKB:Q80YA8	9068941	PMID:20399730	UniProt	PMID:20399730
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:P59637 and UniProtKB:Q9BUF7-PRO_0000021005	9068941	PMID:20861307	IntAct	PMID:20861307
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:O14910 more ...	9068941	PMID:24366813	IntAct	PMID:24366813
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:O14910	9068941	PMID:25416956 and PMID:31515488	IntAct	PMID:25416956 and PMID:31515488
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:P0DTC4	9068941	PMID:34103506	IntAct	PMID:34103506
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:P0DTC4 and UniProtKB:P59637	9068941	PMID:32822073	IntAct	PMID:32822073
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:A0A286YEY3 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:P82279 and UniProtKB:Q8NI35	9068941	PMID:11927608	IntAct	PMID:11927608
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:O76024 more ...	9068941	PMID:32814053	IntAct	PMID:32814053
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:Q8NI35	9068941	PMID:21481793	IntAct	PMID:21481793
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:P0DTC4 more ...	9068941	PMID:33758649	IntAct	PMID:33758649
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:P82279 and UniProtKB:Q96JB8	9068941	PMID:15914641	IntAct	PMID:15914641
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:Q13368	9068941	PMID:16519681	UniProt	PMID:16519681
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:E2QYC9	9068941	PMID:15738264	UniProt	PMID:15738264
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:P82279 and UniProtKB:Q9HCM4	9068941	PMID:17920587	UniProt	PMID:17920587
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:Q00013	9068941	PMID:17584769	UniProt	PMID:17584769
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:Q96JB8	9068941	PMID:15914641	UniProt	PMID:15914641
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:O88910	9068941	PMID:16519681	UniProt	PMID:16519681
Pals1	Squirrel	protein binding	enables	ISO	UniProtKB:O14910 more ...	9068941	PMID:33961781	IntAct	PMID:33961781
Pals1	Squirrel	protein domain specific binding	enables	IEA	UniProtKB:Q8N3R9 and ensembl:ENSP00000261681	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

Pals1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	63,464,311 - 63,554,909 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	10,636,670 - 10,725,647 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	10,636,762 - 10,729,060 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PALS1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	67,241,435 - 67,336,061 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	67,240,713 - 67,336,061 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	67,708,152 - 67,802,778 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	66,777,774 - 66,872,289 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	66,777,773 - 66,872,288	NCBI
Celera	14	47,767,078 - 47,861,589 (+)	NCBI		Celera
Cytogenetic Map	14	q23.3	NCBI
HuRef	14	47,877,875 - 47,972,701 (+)	NCBI		HuRef
CHM1_1	14	67,646,631 - 67,741,468 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	61,448,560 - 61,543,185 (+)	NCBI		T2T-CHM13v2.0

Pals1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	78,795,606 - 78,887,488 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	78,795,681 - 78,887,488 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	78,748,882 - 78,840,714 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	78,748,907 - 78,840,714 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	79,849,934 - 79,941,701 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	79,667,864 - 79,756,927 (+)	NCBI		MGSCv36	mm8
Celera	12	80,213,557 - 80,305,293 (+)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	35.51	NCBI

Pals1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	103,327,965 - 103,384,543 (+)	NCBI		GRCr8
mRatBN7.2	6	97,548,133 - 97,654,163 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	97,548,630 - 97,653,305 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	98,031,311 - 98,081,039 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	98,330,473 - 98,380,201 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	97,710,535 - 97,767,135 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	101,923,675 - 102,029,705 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	101,923,785 - 102,028,592 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	111,299,821 - 111,404,519 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	101,414,657 - 101,471,504 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	101,370,971 - 101,477,629 (+)	NCBI
Celera	6	95,983,793 - 96,039,503 (+)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

Pals1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955466	2,874,058 - 2,918,122 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955466	2,871,445 - 2,937,296 (-)	NCBI	ChiLan1.0	ChiLan1.0

PALS1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	68,332,567 - 68,441,611 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	67,549,079 - 67,658,119 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	47,814,896 - 47,911,206 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	66,693,863 - 66,790,122 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	66,693,863 - 66,790,122 (+)	Ensembl	panpan1.1		panPan2

PALS1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	41,230,230 - 41,330,017 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	41,275,947 - 41,327,348 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	40,921,970 - 41,021,764 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	41,456,949 - 41,557,356 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	41,482,039 - 41,557,348 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	41,075,824 - 41,176,237 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	41,149,990 - 41,249,790 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	41,508,622 - 41,608,769 (+)	NCBI		UU_Cfam_GSD_1.0

PALS1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	90,984,394 - 91,055,620 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	90,955,524 - 91,055,923 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	97,264,802 - 97,365,354 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PALS1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	44,483,005 - 44,576,017 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	44,483,199 - 44,573,172 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	32,712,858 - 32,805,769 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pals1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	33,658,975 - 33,721,548 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	33,659,625 - 33,758,680 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005322808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013357509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021724819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040276118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000001554 ⟹ ENSSTOP00000001391

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936495	10,636,670 - 10,725,647 (+)	Ensembl

RefSeq Acc Id:

XM_005322808 ⟹ XP_005322865

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	63,464,311 - 63,554,909 (-)	NCBI
SpeTri2.0	NW_004936495	10,636,762 - 10,729,060 (+)	NCBI

Sequence:

show sequence

GCGGTCTCGAGTTGGAGTTGCTGGCGGCGACGGCCGCGACGGAGGAGGCTGGCGGTGGGGAGGGGGTGGAGACTAAAGATCCTGAGGTGGGGAATCGAGAGTTTCTGGATTCTTTATCCGGTATTTTG
AGGGCCACCGGAGGGCTGTGGCTTTTGCAGTGTTAAGGAGCAGCTGGGGCGCGAAGGTTGGCGGCGCCGTGGCGCGGAGAGTAAGAAAGTTATCCTGAGTTTTGTGAAAAAACAGAGAAGAGAAACTA
AGGATAGTAGACGAGGTTTTTTCCAGTTTGCATAATATTTCCCTCATGGATATTTTTTCATAGCATTATTATGTGATGTGAGAAGTTTTTTTGTTTTTGTTTTTGTTTTTGGTTTTTTTTTGTGTGAA
GTAACATGGATTTTATACTACAGAATCAAGAAAATTGGCTTTATAGGAAAAATTGATTTATAAAAAGTGGTACAGGTTTTTGTAGATAACCATGACAACATCCCATATGAATGGGCATGTTACAGAGG
AATCAGACAGCGAAGTAAAAAATGTTGGTCTTGCATCACCAGAGGAACACCAGAAGCACCGAGAGATGGCTGTTGACTGTCCTGGAGATTTGGGCACCAGGATGATGCCAGTAAGACGAAGTGCACAG
TTGGAGCGTATTCGACAGCAGCAGGAGGACATGAGACGTAGGAGAGAAGAAGAAGGGAAAAAGCAAGAACTTGACCTTAATTCTTCCATGAGACTCAAGAAACTAGCCCAAATTCCTCCAAAGACTGG
AATAGATAATCCTATGTTTGACACAGAAGAAGGAATTGTCTTAGAAAGCCCTCATTATACTGTGAAAATATTAGAAGTGGAAGACTTGTTTTCTTCACTTAAACATATCCAACATACTTTAGTAGATT
CTCAGAGCCAGGAGGATATTTCACTGCTCTTGCAACTTGTACAAAATAAAGATTTTCAGAATGCATTTAAGATACACAATGCTGTCACTGTACACATGAACAAGGCCAGTCCTCCATTTCCTCTTAGT
TCCAGTGCACAAGATCTTGCACAAGAGGTACAAACCATTTTGAGGCCAGTTCATCAGAAGGAAGGACAAGAATTAACTGCTTTGCTTAGTGCTCCACATATTCAGGCACTTTTATTGGCCCATGATAA
GGTTGCTGAGCAGGAAATGCAGCTAGAACCCATTACAGATGAAAAAGTTTATGAAAGCATTGGCCAGTATGGAGGAGAAACTGTAAAAATAGTTCGTATAGAAAAAGCTCGTGATATTCCATTGGGTG
CCACAGTTCGTAATGAAATGGATTCTGTCATCATTAGCCGGATAGTAAAAGGAGGTGCTGCAGAGAAAAGTGGTCTCTTACATGAAGGAGATGAAGTTCTGGAGATTAATGGCATTGAAATTAGGGGG
AAAGATGTCAATGAGGTTTTTGACTTGTTGTCTGATATGCATGGTACTTTGACATTTGTTCTGATTCCCAGTCAACAGATGAAGCCTCCTCCAGCCAAGGAAACAGTAATCCATGTTAAAGCTCATTT
TGACTATGACCCCTCAGATGATCCTTATGTTCCATGTCGAGAGTTAGGACTGTCGTTTCAAAAAGGGGACATACTTCATATCATCAGTCAAGAAGATCCAAACTGGTGGCAGGCCTACAGGGAAGGGG
ATGAAGATAATCAGCCTCTAGCTGGGCTTGTTCCAGGGAAAAGCTTTCAGCAGCAAAGGGAAGCCATGAAGCAAACCATAGAAGAAGATAAGGAGCCAGAAAAGTCAGGAAAACTATGGTGTGCAAAG
AAGAATAAAAAGAAAAGGAAAAAAGTTTTATATAATGCCAATAAAAATGATGATTATGACAATGAGGAGATCTTAACTTATGAAGAAATGTCACTTTATCATCAGCCAGCAAATAGGAAAAGACCTAT
CATCTTGATTGGTCCACAGAATTGTGGCCAGAATGAATTACGTCAAAAGCTCATGAACAAAGAAAAAGATCGATTTGCATCTGCAGTTCCTCATACAACTCGGAGTAGGAGAGACCATGAAGTGGCCG
GTAGAGATTACCACTTTGTTTCACGGCAAGCCTTTGAGGCAGATATAGCAGCTGGAAAGTTCATTGAGCACGGTGAATTTGAAAAAAATTTGTATGGAACCAGCATAGATTCTGTACGGCAAGTGATC
AACTCCGGAAAAATATGTCTTCTAAGTCTTCGTACACAGTCTTTGAAGACCCTCCGGAATTCAGATTTGAAACCATATATTATCTTCATTGCACCTCCTTCACAAGAAAGACTTCGGGCATTATTGGC
CAAAGAGGGCAAGAATCCAAAGCCTGAAGAGTTGAGAGAAATCATTGAAAAGACTAGAGAGATGGAGCAGAACAATGGCCACTACTTCGACACAGCAATTGTGAATTCAGATCTTGATAAAGCTTATC
AGGAATTGCTGAGATTAATTAACAAACTTGATACAGAACCTCAGTGGGTGCCATCCACTTGGCTGAGATGAAGGAAACATTCTTTCTGTGGCATGATTGGACTTGATCTGGCAAACTGCCATAGGAAG
ATGGCCCCAATACTTCAGCAAGATTGAGAATAAAGATGAAAGACAGCAGGACAAACTGCAGACCAGCTCTTAGATTTTTTTAACTAGTGAGAAGTCCCCTAAGGCTATTTGTGCACAACATTCTTCAT
TCTCTATACATGGCTTTAGGGGTTCTTGGCTCATTTGGGGATTTAAATGAAAGCCTTCAACAGAGCAGTTCCATTTTATCCTGGTAAAAACTTTTGTTTTCACCTAACTAAATCTTTTCTGATTGCTT
GATCATATTTCTATGAAAAACTTGTATGTATATACACAATATTCCATGTCTCAAATAGTTATAAATATTGCTGTTATTTAACATTTAACTTAAATGACTTCATTGGGAATATTTTGGGGTCTGTGCTT
CTATGCACTGAGCAAAAGCAGTATTTGCTTAGGAGACTGATTTAGTAATCAGAAATACTTTCCTAAAGAAGAAAAATAAAAATGGTGCGTGCCACTTTGGTTTGGAGCTGCTTTGGGGGTTTTTATCC
ATTTATGTGTCTTTTAATTCTTAAAAAACAAAACAAAAACATTCCATTAGAAGCACCATTTTTTAAGCTCAAACTTTGTGAATAAGACTGCACACTCAGCAGACTCTAATGTAGTTAAAGGTATAAAA
AACACACTGATCTTTTTAAAGATATAATTTTCTGAATATTTTTGTTAAATTGTCACAAGTGATTTGATAGCTTTGCTTCCTTTCTCTGATATGAATAGTACAAATAGGATGTATCAGTTATGCTTTTT
ATGAATGGCAAACGTTCAAACTGTGTGACTGTTTAAAAGTTTCTTCCTCGTGATGCAAATAGTTTTTTATATACATGGGAGGACATAGCACATTTGATTTTTTTGCAGTTTTACATATGAGCACAGTA
TTATTCTGACTGTGCTACATTAACAAACTGGAATTCTGTTGAGGACTATAGCTGCTGTGACATATACTAATATTAATAGATCAACAAATAGTCATTGATAACATTTGCTCAGCATTAGAATAAAATCA
CACACACACACACACACACACACACACACACACACACGGAATACCTTGACACTTGACTTTGAGATCAGAAGGAAAGGAAGACCTGAAAGTCATTTGAACATTTTAGGAAAATAACATTGGAAGGGAAA
AGTTACTAAGCACATAGAAACAGGTGTTTATCCTAACAATGTCTGCCTCTTGACTCAATTGAACAGTTTGCTAAGGTGTAAAAGAAATTTTAAGCTAATGGGATTTTTATACTGTCTCTGTAACTGTA
GCTTTAAAATGCAGTGTTATTGTCATAGAAAGTTTAATTTGTAGTCTTTTCGTGCCTTTAAGGTAGTGTGATGTGTGACAAACAACCACAAATGTGAATGCCTTATTTTTGTTTTTATAACAACTTTA
GCTACAGCATTTCCTGTTCCCAAAGCTAAACAAACACTGGAATGATACTGACTTGTCACTTAATTTAACACAAGCAACTGTTATTAATAATAAGTAGTTTGTCTCGGTGTCATGTATATATGTGATTT
TTTTCTCTTCTACATGGTTTTATTTGAACAAATGTAGACAGTTTATATGTTGCCTTTTTCTATTCAAATTTGCATGGCCTCTTCAGTTGGCTGGGGAGTGTGTCTTATCTGAAAATACTTTCAAGATA
ATATTCCTTGGGAAGAAGTAACATTCTTGGTTTGAGGAAAGGAATGCTATTCATACTGTCTCCTCAGGCCTAAAACACTCCAGCTGGTAGCAGGAAAATGTAAAGGACACACAATATTCTGCATTGAA
AAACAAGGAATATACTTAGCACTTAATTTCTTTTTCAGTTTTCCAGTTTTCTTTCTCAGGTACAAAAGGTAGTCTGTGGTCAACAGTGGAGTTTTGTGAACTGCATATTGTAACTGACAGCTGTTTTC
AACCTCAAGATTGAAAATTTTGACAGTCCATGGAAGTTTGAGTAAGGTTTTAGGTAGTGTCAGTAAGAGGCTGTTGTGCCACTGCTGATCGTAGGGCCCCACTAGGCTCCCATTTTATCAAGACGTGG
CTTTCACAAACAAAAGGAACCATGATGACGTCTAGAAACTCTAAGGTATTAGATATTTCCAGGAAAAATGAAGTCCTATAATTCTCTTATTCATCAGCAGAAGTAGGGGGATAGAAATGTTTGTCTTG
AACTTTCCTGAGTCCTAGTGATACAGATGTGCTGATATTCAACACAGTCCTTCAACAATATGAAAACTGTTGTGCCGACTGCCTCAGCAGAACACGGAGAAAAGCCGTGCTATACATCTGGTTGTACA
GCCATTTTAGCCAGTTCTATATCTTGTCCCTCCATGGTTCTGATTGGAAACTGCAGTCATGGAGGTTCTAAAAACTTATTATAGAAATTATACCAATAGCTAATGAAATATGCCTGGGAAATCCAAAC
CAGGAAGTGTCTTCATTTATTAAATTTTCATTAAGTCAGAACAAGTGGAAGAATATTATCTAGACGAATCCAGATTTACTTTCTATGAAAATTAACGTCTGGATTTTTTTCCCGTTTCTCCTGGCCTA
AGGAAAAAGTATTGATAAGGAATGAGTTGAATGTAATTTTATGAATGTGTGTGGAAAATATAAACCAGGGTTATAGCCTTAATGAAGGTAACCATTCTGACATCTGTTGTTAATCCCCTTTGTATTCT
TGTATCTGCACTGTTATTTTGAGATGTTATACTGCACACTGTATGGAAAAATAAAGAGTACAATTATATTTCAAATACAAAAAGCCACAGAGTACTTTGTTTTGCCATGTTTATATCCATTGCCATTC
AAGGTTTCTACATATATAAAGACCAATTTCTTGTTGCGAGTGTTCCCCAAAAGTAATACCATTGGAACCTCTGTGTAGAACACAAATTACCTTTTAGGCTATTGCTTATTGTGGAATGTTGCAACAGA
ATGTCCTCTGTTGGTACAGTAAGAAGGTCCTGTTCCATAATAGTTAAAACAACTACCAAAAATGGATAACTTAAGGCTGTGAACTTGAAAAGTTTTCAGGGGAATGAGATATATAATACTTGTAGCAA
ATTTACCTTAAATTAAACAGGAATTAAGGAAGCCAAGGATAGCATGTGAATTGTTGGCAAACACATAACATACTTCATTTTCCCTTTTTTCTACCAGATCATTCGGTATCTCCCAAAGGACATAAATC
ATATACCAGCAAAAAGTTTAATCCACATAAACACCTGCTACCCCATTCTATTTTTCAATTCCTATTCCTGATCTATCCCCTTCTCCTATGGATCAGATCACTCCAGTTCCATACAACAAACTGTCCAC
TATTTTCTCTTGATTTCTTTTTAATAAATGCTAAACCATAGGATCATTTGCAGTTGTAAAGGCAGTTTAAACAAGGCCAATAAACTCCAGAGCTTTTAAGAAATACTGAATTTATCTAAATGAAAATT
CACCAAATAATTCTGGTTCTATACCCCCATCTTCTTTTGCCTCTTGATTTCAGAAGCTTGTTTAAGCACCAAGCTTCTGAAATCAAGATACCACTTGACTTACACTGCAGTTATGCTGTTTGGCCCAT
CTAAGCCTCAATTTCCTCATCTGCAGAGTGAGTATAGGAGAATTTACCTCATCAAGATATTGGGGAATTAGAAGTTAAACAGCCAGTGTTGCCTATTTTTAAACTATTTGTGAATTCAATAATTGGTT
TTCTAATCACCAAAGAATTTATACTCAGAGTTTATTCTGTGAGCCAAGCTTTCTACCAATCATCTCCTGGATAGGTCCTAATTTTACCTTTAAATACCTTAAGTTTTAAACACATGGGAGGCACAAAG
GATAAAAGTTGAGGTATAAAAACTCTGAAACACACACCCATAATTCCAGCTGCTCAAGAGGCTGAGCTAGGAGAATGGTGAATTTAAGGCCAGCCTGGGCAACCTGGTGAGACCCCATGTCACCACTT
TTTAGCTTTTTAACCTAAGGCCATTACTGAAGTTCCCTGTCCTCAAACTTTTCCTCCATGAAATGGGGATTAAAGTATACCTTTTATGATTATTGTGATGACACATAATAACTAATCTATTATTTGAT
AGCAAGCATTAAATGTCTGTAAAATTATTTAGTACTTAAAAATAGCCTAAACTGTGAAATCGATTCATTAAAACATATTAAGGCTAGTGCCACAATTTAAAAACTATCCATTCCATGGATGTCATGCC
CAAAATGCCTGGAACTGACTGAAAGGCTGAGGAATCATAGGTAAATATGCCAAATCAAATAATACCAAAAACTTCAGTCATCACCTGTGATGGCCATTCACAAACCTCATCTTCATACATGATAGTTA
TTATTGCTTATAAAATAATAAAAAGTTACATTATTTATTTCAAAATGAAAATTTATGTTTAGGAAAGAATTATGAA

hide sequence

RefSeq Acc Id:

XM_013357509 ⟹ XP_013212963

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	63,464,311 - 63,554,908 (-)	NCBI
SpeTri2.0	NW_004936495	10,636,762 - 10,729,060 (+)	NCBI

Sequence:

show sequence

GCGGTCTCGAGTTGGAGTTGCTGGCGGCGACGGCCGCGACGGAGGAGGCTGGCGGTGGGGAGGGGGTGGAGACTAAAGATCCTGAGGTGGGGAATCGAGAGTTTCTGGATTCTTTATCCGGTATTTTG
AGGGCCACCGGAGGGCTGTGGCTTTTGCAGTGTTAAGGAGCAGCTGGGGCGCGAAGGTTGGCGGCGCCGTGGCGCGGAGAGTAAGAAAGTTATCCTGAGTTTTGTGAAAAAACAGAGAAGAGAAACTA
AGGATAGTAGACGAGGTTTTTTCCAGTTTGCATAATAGGAACACCAGAAGCACCGAGAGATGGCTGTTGACTGTCCTGGAGATTTGGGCACCAGGATGATGCCAGTAAGACGAAGTGCACAGTTGGAG
CGTATTCGACAGCAGCAGGAGGACATGAGACGTAGGAGAGAAGAAGAAGGGAAAAAGCAAGAACTTGACCTTAATTCTTCCATGAGACTCAAGAAACTAGCCCAAATTCCTCCAAAGACTGGAATAGA
TAATCCTATGTTTGACACAGAAGAAGGAATTGTCTTAGAAAGCCCTCATTATACTGTGAAAATATTAGAAGTGGAAGACTTGTTTTCTTCACTTAAACATATCCAACATACTTTAGTAGATTCTCAGA
GCCAGGAGGATATTTCACTGCTCTTGCAACTTGTACAAAATAAAGATTTTCAGAATGCATTTAAGATACACAATGCTGTCACTGTACACATGAACAAGGCCAGTCCTCCATTTCCTCTTAGTTCCAGT
GCACAAGATCTTGCACAAGAGGTACAAACCATTTTGAGGCCAGTTCATCAGAAGGAAGGACAAGAATTAACTGCTTTGCTTAGTGCTCCACATATTCAGGCACTTTTATTGGCCCATGATAAGGTTGC
TGAGCAGGAAATGCAGCTAGAACCCATTACAGATGAAAAAGTTTATGAAAGCATTGGCCAGTATGGAGGAGAAACTGTAAAAATAGTTCGTATAGAAAAAGCTCGTGATATTCCATTGGGTGCCACAG
TTCGTAATGAAATGGATTCTGTCATCATTAGCCGGATAGTAAAAGGAGGTGCTGCAGAGAAAAGTGGTCTCTTACATGAAGGAGATGAAGTTCTGGAGATTAATGGCATTGAAATTAGGGGGAAAGAT
GTCAATGAGGTTTTTGACTTGTTGTCTGATATGCATGGTACTTTGACATTTGTTCTGATTCCCAGTCAACAGATGAAGCCTCCTCCAGCCAAGGAAACAGTAATCCATGTTAAAGCTCATTTTGACTA
TGACCCCTCAGATGATCCTTATGTTCCATGTCGAGAGTTAGGACTGTCGTTTCAAAAAGGGGACATACTTCATATCATCAGTCAAGAAGATCCAAACTGGTGGCAGGCCTACAGGGAAGGGGATGAAG
ATAATCAGCCTCTAGCTGGGCTTGTTCCAGGGAAAAGCTTTCAGCAGCAAAGGGAAGCCATGAAGCAAACCATAGAAGAAGATAAGGAGCCAGAAAAGTCAGGAAAACTATGGTGTGCAAAGAAGAAT
AAAAAGAAAAGGAAAAAAGTTTTATATAATGCCAATAAAAATGATGATTATGACAATGAGGAGATCTTAACTTATGAAGAAATGTCACTTTATCATCAGCCAGCAAATAGGAAAAGACCTATCATCTT
GATTGGTCCACAGAATTGTGGCCAGAATGAATTACGTCAAAAGCTCATGAACAAAGAAAAAGATCGATTTGCATCTGCAGTTCCTCATACAACTCGGAGTAGGAGAGACCATGAAGTGGCCGGTAGAG
ATTACCACTTTGTTTCACGGCAAGCCTTTGAGGCAGATATAGCAGCTGGAAAGTTCATTGAGCACGGTGAATTTGAAAAAAATTTGTATGGAACCAGCATAGATTCTGTACGGCAAGTGATCAACTCC
GGAAAAATATGTCTTCTAAGTCTTCGTACACAGTCTTTGAAGACCCTCCGGAATTCAGATTTGAAACCATATATTATCTTCATTGCACCTCCTTCACAAGAAAGACTTCGGGCATTATTGGCCAAAGA
GGGCAAGAATCCAAAGCCTGAAGAGTTGAGAGAAATCATTGAAAAGACTAGAGAGATGGAGCAGAACAATGGCCACTACTTCGACACAGCAATTGTGAATTCAGATCTTGATAAAGCTTATCAGGAAT
TGCTGAGATTAATTAACAAACTTGATACAGAACCTCAGTGGGTGCCATCCACTTGGCTGAGATGAAGGAAACATTCTTTCTGTGGCATGATTGGACTTGATCTGGCAAACTGCCATAGGAAGATGGCC
CCAATACTTCAGCAAGATTGAGAATAAAGATGAAAGACAGCAGGACAAACTGCAGACCAGCTCTTAGATTTTTTTAACTAGTGAGAAGTCCCCTAAGGCTATTTGTGCACAACATTCTTCATTCTCTA
TACATGGCTTTAGGGGTTCTTGGCTCATTTGGGGATTTAAATGAAAGCCTTCAACAGAGCAGTTCCATTTTATCCTGGTAAAAACTTTTGTTTTCACCTAACTAAATCTTTTCTGATTGCTTGATCAT
ATTTCTATGAAAAACTTGTATGTATATACACAATATTCCATGTCTCAAATAGTTATAAATATTGCTGTTATTTAACATTTAACTTAAATGACTTCATTGGGAATATTTTGGGGTCTGTGCTTCTATGC
ACTGAGCAAAAGCAGTATTTGCTTAGGAGACTGATTTAGTAATCAGAAATACTTTCCTAAAGAAGAAAAATAAAAATGGTGCGTGCCACTTTGGTTTGGAGCTGCTTTGGGGGTTTTTATCCATTTAT
GTGTCTTTTAATTCTTAAAAAACAAAACAAAAACATTCCATTAGAAGCACCATTTTTTAAGCTCAAACTTTGTGAATAAGACTGCACACTCAGCAGACTCTAATGTAGTTAAAGGTATAAAAAACACA
CTGATCTTTTTAAAGATATAATTTTCTGAATATTTTTGTTAAATTGTCACAAGTGATTTGATAGCTTTGCTTCCTTTCTCTGATATGAATAGTACAAATAGGATGTATCAGTTATGCTTTTTATGAAT
GGCAAACGTTCAAACTGTGTGACTGTTTAAAAGTTTCTTCCTCGTGATGCAAATAGTTTTTTATATACATGGGAGGACATAGCACATTTGATTTTTTTGCAGTTTTACATATGAGCACAGTATTATTC
TGACTGTGCTACATTAACAAACTGGAATTCTGTTGAGGACTATAGCTGCTGTGACATATACTAATATTAATAGATCAACAAATAGTCATTGATAACATTTGCTCAGCATTAGAATAAAATCACACACA
CACACACACACACACACACACACACACACACGGAATACCTTGACACTTGACTTTGAGATCAGAAGGAAAGGAAGACCTGAAAGTCATTTGAACATTTTAGGAAAATAACATTGGAAGGGAAAAGTTAC
TAAGCACATAGAAACAGGTGTTTATCCTAACAATGTCTGCCTCTTGACTCAATTGAACAGTTTGCTAAGGTGTAAAAGAAATTTTAAGCTAATGGGATTTTTATACTGTCTCTGTAACTGTAGCTTTA
AAATGCAGTGTTATTGTCATAGAAAGTTTAATTTGTAGTCTTTTCGTGCCTTTAAGGTAGTGTGATGTGTGACAAACAACCACAAATGTGAATGCCTTATTTTTGTTTTTATAACAACTTTAGCTACA
GCATTTCCTGTTCCCAAAGCTAAACAAACACTGGAATGATACTGACTTGTCACTTAATTTAACACAAGCAACTGTTATTAATAATAAGTAGTTTGTCTCGGTGTCATGTATATATGTGATTTTTTTCT
CTTCTACATGGTTTTATTTGAACAAATGTAGACAGTTTATATGTTGCCTTTTTCTATTCAAATTTGCATGGCCTCTTCAGTTGGCTGGGGAGTGTGTCTTATCTGAAAATACTTTCAAGATAATATTC
CTTGGGAAGAAGTAACATTCTTGGTTTGAGGAAAGGAATGCTATTCATACTGTCTCCTCAGGCCTAAAACACTCCAGCTGGTAGCAGGAAAATGTAAAGGACACACAATATTCTGCATTGAAAAACAA
GGAATATACTTAGCACTTAATTTCTTTTTCAGTTTTCCAGTTTTCTTTCTCAGGTACAAAAGGTAGTCTGTGGTCAACAGTGGAGTTTTGTGAACTGCATATTGTAACTGACAGCTGTTTTCAACCTC
AAGATTGAAAATTTTGACAGTCCATGGAAGTTTGAGTAAGGTTTTAGGTAGTGTCAGTAAGAGGCTGTTGTGCCACTGCTGATCGTAGGGCCCCACTAGGCTCCCATTTTATCAAGACGTGGCTTTCA
CAAACAAAAGGAACCATGATGACGTCTAGAAACTCTAAGGTATTAGATATTTCCAGGAAAAATGAAGTCCTATAATTCTCTTATTCATCAGCAGAAGTAGGGGGATAGAAATGTTTGTCTTGAACTTT
CCTGAGTCCTAGTGATACAGATGTGCTGATATTCAACACAGTCCTTCAACAATATGAAAACTGTTGTGCCGACTGCCTCAGCAGAACACGGAGAAAAGCCGTGCTATACATCTGGTTGTACAGCCATT
TTAGCCAGTTCTATATCTTGTCCCTCCATGGTTCTGATTGGAAACTGCAGTCATGGAGGTTCTAAAAACTTATTATAGAAATTATACCAATAGCTAATGAAATATGCCTGGGAAATCCAAACCAGGAA
GTGTCTTCATTTATTAAATTTTCATTAAGTCAGAACAAGTGGAAGAATATTATCTAGACGAATCCAGATTTACTTTCTATGAAAATTAACGTCTGGATTTTTTTCCCGTTTCTCCTGGCCTAAGGAAA
AAGTATTGATAAGGAATGAGTTGAATGTAATTTTATGAATGTGTGTGGAAAATATAAACCAGGGTTATAGCCTTAATGAAGGTAACCATTCTGACATCTGTTGTTAATCCCCTTTGTATTCTTGTATC
TGCACTGTTATTTTGAGATGTTATACTGCACACTGTATGGAAAAATAAAGAGTACAATTATATTTCAAATACAAAAAGCCACAGAGTACTTTGTTTTGCCATGTTTATATCCATTGCCATTCAAGGTT
TCTACATATATAAAGACCAATTTCTTGTTGCGAGTGTTCCCCAAAAGTAATACCATTGGAACCTCTGTGTAGAACACAAATTACCTTTTAGGCTATTGCTTATTGTGGAATGTTGCAACAGAATGTCC
TCTGTTGGTACAGTAAGAAGGTCCTGTTCCATAATAGTTAAAACAACTACCAAAAATGGATAACTTAAGGCTGTGAACTTGAAAAGTTTTCAGGGGAATGAGATATATAATACTTGTAGCAAATTTAC
CTTAAATTAAACAGGAATTAAGGAAGCCAAGGATAGCATGTGAATTGTTGGCAAACACATAACATACTTCATTTTCCCTTTTTTCTACCAGATCATTCGGTATCTCCCAAAGGACATAAATCATATAC
CAGCAAAAAGTTTAATCCACATAAACACCTGCTACCCCATTCTATTTTTCAATTCCTATTCCTGATCTATCCCCTTCTCCTATGGATCAGATCACTCCAGTTCCATACAACAAACTGTCCACTATTTT
CTCTTGATTTCTTTTTAATAAATGCTAAACCATAGGATCATTTGCAGTTGTAAAGGCAGTTTAAACAAGGCCAATAAACTCCAGAGCTTTTAAGAAATACTGAATTTATCTAAATGAAAATTCACCAA
ATAATTCTGGTTCTATACCCCCATCTTCTTTTGCCTCTTGATTTCAGAAGCTTGTTTAAGCACCAAGCTTCTGAAATCAAGATACCACTTGACTTACACTGCAGTTATGCTGTTTGGCCCATCTAAGC
CTCAATTTCCTCATCTGCAGAGTGAGTATAGGAGAATTTACCTCATCAAGATATTGGGGAATTAGAAGTTAAACAGCCAGTGTTGCCTATTTTTAAACTATTTGTGAATTCAATAATTGGTTTTCTAA
TCACCAAAGAATTTATACTCAGAGTTTATTCTGTGAGCCAAGCTTTCTACCAATCATCTCCTGGATAGGTCCTAATTTTACCTTTAAATACCTTAAGTTTTAAACACATGGGAGGCACAAAGGATAAA
AGTTGAGGTATAAAAACTCTGAAACACACACCCATAATTCCAGCTGCTCAAGAGGCTGAGCTAGGAGAATGGTGAATTTAAGGCCAGCCTGGGCAACCTGGTGAGACCCCATGTCACCACTTTTTAGC
TTTTTAACCTAAGGCCATTACTGAAGTTCCCTGTCCTCAAACTTTTCCTCCATGAAATGGGGATTAAAGTATACCTTTTATGATTATTGTGATGACACATAATAACTAATCTATTATTTGATAGCAAG
CATTAAATGTCTGTAAAATTATTTAGTACTTAAAAATAGCCTAAACTGTGAAATCGATTCATTAAAACATATTAAGGCTAGTGCCACAATTTAAAAACTATCCATTCCATGGATGTCATGCCCAAAAT
GCCTGGAACTGACTGAAAGGCTGAGGAATCATAGGTAAATATGCCAAATCAAATAATACCAAAAACTTCAGTCATCACCTGTGATGGCCATTCACAAACCTCATCTTCATACATGATAGTTATTATTG
CTTATAAAATAATAAAAAGTTACATTATTTATTTCAAAATGAAAATTTATGTTTAGGAAAGAATTATGAA

hide sequence

RefSeq Acc Id:

XM_021724819 ⟹ XP_021580494

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	63,464,311 - 63,554,538 (-)	NCBI
SpeTri2.0	NW_004936495	10,637,092 - 10,729,060 (+)	NCBI

Sequence:

show sequence

CGGGGGCTGGACCCCCAGGCTGCCCGGCCAGCAGCGCCTGGCAGTGGGATCGGTAGCTGCGGCGGGTGCGAGTCCAACCTTTGTCCCTCAAAGGAACGCTGCCTGCGCGGTGCCCGCTCCCTGTGCCT
TGGCCAGGGACGCACCTTGGCGCGGGCTCCAGCCCGCCCCAGCTGAGTTGCGGGTCGCGCGGCTTTGAGTCGTCTGCCTGCTGAGCCTGGGCCGGGAGTTGGCGACACTGGGGACGCCTTTCTGGCCG
GTCGGGAAGTCGGCGGGGGAAACACTTTCCTTTAGAAGACGGAATGTAGCCGGCGTTCCACTGACTGAGTCAGCTCCTGAGTAAGAAAGTTATCCTGAGTTTTGTGAAAAAACAGAGAAGAGAAACTA
AGGATAGTAGACGAGGTTTTTTCCAGTTTGCATAATATTTCCCTCATGGATATTTTTTCATAGCATTATTATGTGATGTGAGAAGTTTTTTTGTTTTTGTTTTTGTTTTTGGTTTTTTTTTGTGTGAA
GTAACATGGATTTTATACTACAGAATCAAGAAAATTGGCTTTATAGGAAAAATTGATTTATAAAAAGTGGTACAGGTTTTTGTAGATAACCATGACAACATCCCATATGAATGGGCATGTTACAGAGG
AATCAGACAGCGAAGTAAAAAATGTTGGTCTTGCATCACCAGAGGAACACCAGAAGCACCGAGAGATGGCTGTTGACTGTCCTGGAGATTTGGGCACCAGGATGATGCCAGTAAGACGAAGTGCACAG
TTGGAGCGTATTCGACAGCAGCAGGAGGACATGAGACGTAGGAGAGAAGAAGAAGGGAAAAAGCAAGAACTTGACCTTAATTCTTCCATGAGACTCAAGAAACTAGCCCAAATTCCTCCAAAGACTGG
AATAGATAATCCTATGTTTGACACAGAAGAAGGAATTGTCTTAGAAAGCCCTCATTATACTGTGAAAATATTAGAAGTGGAAGACTTGTTTTCTTCACTTAAACATATCCAACATACTTTAGTAGATT
CTCAGAGCCAGGAGGATATTTCACTGCTCTTGCAACTTGTACAAAATAAAGATTTTCAGAATGCATTTAAGATACACAATGCTGTCACTGTACACATGAACAAGGCCAGTCCTCCATTTCCTCTTAGT
TCCAGTGCACAAGATCTTGCACAAGAGGTACAAACCATTTTGAGGCCAGTTCATCAGAAGGAAGGACAAGAATTAACTGCTTTGCTTAGTGCTCCACATATTCAGGCACTTTTATTGGCCCATGATAA
GGTTGCTGAGCAGGAAATGCAGCTAGAACCCATTACAGATGAAAAAGTTTATGAAAGCATTGGCCAGTATGGAGGAGAAACTGTAAAAATAGTTCGTATAGAAAAAGCTCGTGATATTCCATTGGGTG
CCACAGTTCGTAATGAAATGGATTCTGTCATCATTAGCCGGATAGTAAAAGGAGGTGCTGCAGAGAAAAGTGGTCTCTTACATGAAGGAGATGAAGTTCTGGAGATTAATGGCATTGAAATTAGGGGG
AAAGATGTCAATGAGGTTTTTGACTTGTTGTCTGATATGCATGGTACTTTGACATTTGTTCTGATTCCCAGTCAACAGATGAAGCCTCCTCCAGCCAAGGAAACAGTAATCCATGTTAAAGCTCATTT
TGACTATGACCCCTCAGATGATCCTTATGTTCCATGTCGAGAGTTAGGACTGTCGTTTCAAAAAGGGGACATACTTCATATCATCAGTCAAGAAGATCCAAACTGGTGGCAGGCCTACAGGGAAGGGG
ATGAAGATAATCAGCCTCTAGCTGGGCTTGTTCCAGGGAAAAGCTTTCAGCAGCAAAGGGAAGCCATGAAGCAAACCATAGAAGAAGATAAGGAGCCAGAAAAGTCAGGAAAACTATGGTGTGCAAAG
AAGAATAAAAAGAAAAGGAAAAAAGTTTTATATAATGCCAATAAAAATGATGATTATGACAATGAGGAGATCTTAACTTATGAAGAAATGTCACTTTATCATCAGCCAGCAAATAGGAAAAGACCTAT
CATCTTGATTGGTCCACAGAATTGTGGCCAGAATGAATTACGTCAAAAGCTCATGAACAAAGAAAAAGATCGATTTGCATCTGCAGTTCCTCATACAACTCGGAGTAGGAGAGACCATGAAGTGGCCG
GTAGAGATTACCACTTTGTTTCACGGCAAGCCTTTGAGGCAGATATAGCAGCTGGAAAGTTCATTGAGCACGGTGAATTTGAAAAAAATTTGTATGGAACCAGCATAGATTCTGTACGGCAAGTGATC
AACTCCGGAAAAATATGTCTTCTAAGTCTTCGTACACAGTCTTTGAAGACCCTCCGGAATTCAGATTTGAAACCATATATTATCTTCATTGCACCTCCTTCACAAGAAAGACTTCGGGCATTATTGGC
CAAAGAGGGCAAGAATCCAAAGCCTGAAGAGTTGAGAGAAATCATTGAAAAGACTAGAGAGATGGAGCAGAACAATGGCCACTACTTCGACACAGCAATTGTGAATTCAGATCTTGATAAAGCTTATC
AGGAATTGCTGAGATTAATTAACAAACTTGATACAGAACCTCAGTGGGTGCCATCCACTTGGCTGAGATGAAGGAAACATTCTTTCTGTGGCATGATTGGACTTGATCTGGCAAACTGCCATAGGAAG
ATGGCCCCAATACTTCAGCAAGATTGAGAATAAAGATGAAAGACAGCAGGACAAACTGCAGACCAGCTCTTAGATTTTTTTAACTAGTGAGAAGTCCCCTAAGGCTATTTGTGCACAACATTCTTCAT
TCTCTATACATGGCTTTAGGGGTTCTTGGCTCATTTGGGGATTTAAATGAAAGCCTTCAACAGAGCAGTTCCATTTTATCCTGGTAAAAACTTTTGTTTTCACCTAACTAAATCTTTTCTGATTGCTT
GATCATATTTCTATGAAAAACTTGTATGTATATACACAATATTCCATGTCTCAAATAGTTATAAATATTGCTGTTATTTAACATTTAACTTAAATGACTTCATTGGGAATATTTTGGGGTCTGTGCTT
CTATGCACTGAGCAAAAGCAGTATTTGCTTAGGAGACTGATTTAGTAATCAGAAATACTTTCCTAAAGAAGAAAAATAAAAATGGTGCGTGCCACTTTGGTTTGGAGCTGCTTTGGGGGTTTTTATCC
ATTTATGTGTCTTTTAATTCTTAAAAAACAAAACAAAAACATTCCATTAGAAGCACCATTTTTTAAGCTCAAACTTTGTGAATAAGACTGCACACTCAGCAGACTCTAATGTAGTTAAAGGTATAAAA
AACACACTGATCTTTTTAAAGATATAATTTTCTGAATATTTTTGTTAAATTGTCACAAGTGATTTGATAGCTTTGCTTCCTTTCTCTGATATGAATAGTACAAATAGGATGTATCAGTTATGCTTTTT
ATGAATGGCAAACGTTCAAACTGTGTGACTGTTTAAAAGTTTCTTCCTCGTGATGCAAATAGTTTTTTATATACATGGGAGGACATAGCACATTTGATTTTTTTGCAGTTTTACATATGAGCACAGTA
TTATTCTGACTGTGCTACATTAACAAACTGGAATTCTGTTGAGGACTATAGCTGCTGTGACATATACTAATATTAATAGATCAACAAATAGTCATTGATAACATTTGCTCAGCATTAGAATAAAATCA
CACACACACACACACACACACACACACACACACACACGGAATACCTTGACACTTGACTTTGAGATCAGAAGGAAAGGAAGACCTGAAAGTCATTTGAACATTTTAGGAAAATAACATTGGAAGGGAAA
AGTTACTAAGCACATAGAAACAGGTGTTTATCCTAACAATGTCTGCCTCTTGACTCAATTGAACAGTTTGCTAAGGTGTAAAAGAAATTTTAAGCTAATGGGATTTTTATACTGTCTCTGTAACTGTA
GCTTTAAAATGCAGTGTTATTGTCATAGAAAGTTTAATTTGTAGTCTTTTCGTGCCTTTAAGGTAGTGTGATGTGTGACAAACAACCACAAATGTGAATGCCTTATTTTTGTTTTTATAACAACTTTA
GCTACAGCATTTCCTGTTCCCAAAGCTAAACAAACACTGGAATGATACTGACTTGTCACTTAATTTAACACAAGCAACTGTTATTAATAATAAGTAGTTTGTCTCGGTGTCATGTATATATGTGATTT
TTTTCTCTTCTACATGGTTTTATTTGAACAAATGTAGACAGTTTATATGTTGCCTTTTTCTATTCAAATTTGCATGGCCTCTTCAGTTGGCTGGGGAGTGTGTCTTATCTGAAAATACTTTCAAGATA
ATATTCCTTGGGAAGAAGTAACATTCTTGGTTTGAGGAAAGGAATGCTATTCATACTGTCTCCTCAGGCCTAAAACACTCCAGCTGGTAGCAGGAAAATGTAAAGGACACACAATATTCTGCATTGAA
AAACAAGGAATATACTTAGCACTTAATTTCTTTTTCAGTTTTCCAGTTTTCTTTCTCAGGTACAAAAGGTAGTCTGTGGTCAACAGTGGAGTTTTGTGAACTGCATATTGTAACTGACAGCTGTTTTC
AACCTCAAGATTGAAAATTTTGACAGTCCATGGAAGTTTGAGTAAGGTTTTAGGTAGTGTCAGTAAGAGGCTGTTGTGCCACTGCTGATCGTAGGGCCCCACTAGGCTCCCATTTTATCAAGACGTGG
CTTTCACAAACAAAAGGAACCATGATGACGTCTAGAAACTCTAAGGTATTAGATATTTCCAGGAAAAATGAAGTCCTATAATTCTCTTATTCATCAGCAGAAGTAGGGGGATAGAAATGTTTGTCTTG
AACTTTCCTGAGTCCTAGTGATACAGATGTGCTGATATTCAACACAGTCCTTCAACAATATGAAAACTGTTGTGCCGACTGCCTCAGCAGAACACGGAGAAAAGCCGTGCTATACATCTGGTTGTACA
GCCATTTTAGCCAGTTCTATATCTTGTCCCTCCATGGTTCTGATTGGAAACTGCAGTCATGGAGGTTCTAAAAACTTATTATAGAAATTATACCAATAGCTAATGAAATATGCCTGGGAAATCCAAAC
CAGGAAGTGTCTTCATTTATTAAATTTTCATTAAGTCAGAACAAGTGGAAGAATATTATCTAGACGAATCCAGATTTACTTTCTATGAAAATTAACGTCTGGATTTTTTTCCCGTTTCTCCTGGCCTA
AGGAAAAAGTATTGATAAGGAATGAGTTGAATGTAATTTTATGAATGTGTGTGGAAAATATAAACCAGGGTTATAGCCTTAATGAAGGTAACCATTCTGACATCTGTTGTTAATCCCCTTTGTATTCT
TGTATCTGCACTGTTATTTTGAGATGTTATACTGCACACTGTATGGAAAAATAAAGAGTACAATTATATTTCAAATACAAAAAGCCACAGAGTACTTTGTTTTGCCATGTTTATATCCATTGCCATTC
AAGGTTTCTACATATATAAAGACCAATTTCTTGTTGCGAGTGTTCCCCAAAAGTAATACCATTGGAACCTCTGTGTAGAACACAAATTACCTTTTAGGCTATTGCTTATTGTGGAATGTTGCAACAGA
ATGTCCTCTGTTGGTACAGTAAGAAGGTCCTGTTCCATAATAGTTAAAACAACTACCAAAAATGGATAACTTAAGGCTGTGAACTTGAAAAGTTTTCAGGGGAATGAGATATATAATACTTGTAGCAA
ATTTACCTTAAATTAAACAGGAATTAAGGAAGCCAAGGATAGCATGTGAATTGTTGGCAAACACATAACATACTTCATTTTCCCTTTTTTCTACCAGATCATTCGGTATCTCCCAAAGGACATAAATC
ATATACCAGCAAAAAGTTTAATCCACATAAACACCTGCTACCCCATTCTATTTTTCAATTCCTATTCCTGATCTATCCCCTTCTCCTATGGATCAGATCACTCCAGTTCCATACAACAAACTGTCCAC
TATTTTCTCTTGATTTCTTTTTAATAAATGCTAAACCATAGGATCATTTGCAGTTGTAAAGGCAGTTTAAACAAGGCCAATAAACTCCAGAGCTTTTAAGAAATACTGAATTTATCTAAATGAAAATT
CACCAAATAATTCTGGTTCTATACCCCCATCTTCTTTTGCCTCTTGATTTCAGAAGCTTGTTTAAGCACCAAGCTTCTGAAATCAAGATACCACTTGACTTACACTGCAGTTATGCTGTTTGGCCCAT
CTAAGCCTCAATTTCCTCATCTGCAGAGTGAGTATAGGAGAATTTACCTCATCAAGATATTGGGGAATTAGAAGTTAAACAGCCAGTGTTGCCTATTTTTAAACTATTTGTGAATTCAATAATTGGTT
TTCTAATCACCAAAGAATTTATACTCAGAGTTTATTCTGTGAGCCAAGCTTTCTACCAATCATCTCCTGGATAGGTCCTAATTTTACCTTTAAATACCTTAAGTTTTAAACACATGGGAGGCACAAAG
GATAAAAGTTGAGGTATAAAAACTCTGAAACACACACCCATAATTCCAGCTGCTCAAGAGGCTGAGCTAGGAGAATGGTGAATTTAAGGCCAGCCTGGGCAACCTGGTGAGACCCCATGTCACCACTT
TTTAGCTTTTTAACCTAAGGCCATTACTGAAGTTCCCTGTCCTCAAACTTTTCCTCCATGAAATGGGGATTAAAGTATACCTTTTATGATTATTGTGATGACACATAATAACTAATCTATTATTTGAT
AGCAAGCATTAAATGTCTGTAAAATTATTTAGTACTTAAAAATAGCCTAAACTGTGAAATCGATTCATTAAAACATATTAAGGCTAGTGCCACAATTTAAAAACTATCCATTCCATGGATGTCATGCC
CAAAATGCCTGGAACTGACTGAAAGGCTGAGGAATCATAGGTAAATATGCCAAATCAAATAATACCAAAAACTTCAGTCATCACCTGTGATGGCCATTCACAAACCTCATCTTCATACATGATAGTTA
TTATTGCTTATAAAATAATAAAAAGTTACATTATTTATTTCAAAATGAAAATTTATGTTTAGGAAAGAATTATGAA

hide sequence

RefSeq Acc Id:

XM_040276118 ⟹ XP_040132052

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	63,464,311 - 63,554,536 (-)	NCBI


Protein RefSeqs	XP_005322865	(Get FASTA)	NCBI Sequence Viewer
	XP_013212963	(Get FASTA)	NCBI Sequence Viewer
	XP_021580494	(Get FASTA)	NCBI Sequence Viewer
	XP_040132052	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000001391.3
GenBank Protein	KAG3261263	(Get FASTA)	NCBI Sequence Viewer
	KAG3261264	(Get FASTA)	NCBI Sequence Viewer
	KAG3261265	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013212963 ⟸ XM_013357509

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAVDCPGDLGTRMMPVRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPMFDTEEGIVLESPHYTVKILEVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNA
FKIHNAVTVHMNKASPPFPLSSSAQDLAQEVQTILRPVHQKEGQELTALLSAPHIQALLLAHDKVAEQEMQLEPITDEKVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAE
KSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQMKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHIISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREA
MKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQKLMNKEKDRFASAVPHTTRSRRDHEVAGRDYHFVSRQAFEADIAAGKFI
EHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWL
R

hide sequence

RefSeq Acc Id:	XP_005322865 ⟸ XM_005322808
- Peptide Label:	isoform X1
- UniProtKB:	I3LYT1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTSHMNGHVTEESDSEVKNVGLASPEEHQKHREMAVDCPGDLGTRMMPVRRSAQLERIRQQQE DMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPMFDTEEGIVLESPHYTVKILEVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAVTVHMNKASPPFPLSSSAQDLAQE VQTILRPVHQKEGQELTALLSAPHIQALLLAHDKVAEQEMQLEPITDEKVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDL LSDMHGTLTFVLIPSQQMKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHIISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKV LYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQKLMNKEKDRFASAVPHTTRSRRDHEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLS LRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWLR hide sequence

RefSeq Acc Id:	XP_021580494 ⟸ XM_021724819
- Peptide Label:	isoform X1
- UniProtKB:	I3LYT1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTSHMNGHVTEESDSEVKNVGLASPEEHQKHREMAVDCPGDLGTRMMPVRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPMFDTEEGIVLESPHYTVKILEVEDLF SSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAVTVHMNKASPPFPLSSSAQDLAQEVQTILRPVHQKEGQELTALLSAPHIQALLLAHDKVAEQEMQLEPITDEKVYESIGQYGGETVKI VRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQMKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHIISQ EDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQKLMNKEKDRFASAVP HTTRSRRDHEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFD TAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWLR hide sequence

RefSeq Acc Id:	XP_040132052 ⟸ XM_040276118
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSSTOP00000001391 ⟸ ENSSTOT00000001554

Protein Domains

Guanylate kinase-like L27 PDZ SH3

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000001556	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000001554.3	UniProtKB/TrEMBL
Gene3D-CATH	2.30.42.10	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	L27 domain	UniProtKB/TrEMBL
	SH3 Domains	UniProtKB/TrEMBL
InterPro	GK/Ca_channel_bsu	UniProtKB/TrEMBL
	Guanylate_kin-like_dom	UniProtKB/TrEMBL
	Guanylate_kinase_CS	UniProtKB/TrEMBL
	L27_C	UniProtKB/TrEMBL
	L27_dom	UniProtKB/TrEMBL
	L27_dom_sf	UniProtKB/TrEMBL
	L27_N	UniProtKB/TrEMBL
	MAGUK	UniProtKB/TrEMBL
	MPP5_SH3	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	SH3-like_dom_sf	UniProtKB/TrEMBL
	SH3_domain	UniProtKB/TrEMBL
NCBI Gene	Mpp5	ENTREZGENE
PANTHER	MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK	UniProtKB/TrEMBL
Pfam	Guanylate_kin	UniProtKB/TrEMBL
	L27	UniProtKB/TrEMBL
	L27_N	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	SH3_2	UniProtKB/TrEMBL
PROSITE	GUANYLATE_KINASE_1	UniProtKB/TrEMBL
	GUANYLATE_KINASE_2	UniProtKB/TrEMBL
	L27	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
SMART	GuKc	UniProtKB/TrEMBL
	L27	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF101288	UniProtKB/TrEMBL
	SSF50044	UniProtKB/TrEMBL
	SSF50156	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	I3LYT1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-09-21	Pals1	protein associated with LIN7 1, MAGUK p55 family member	Pals1	protein associated with LIN7 1, MAGUK family member	Symbol and/or name change	5135510	APPROVED
2021-02-23	Pals1	protein associated with LIN7 1, MAGUK family member	Mpp5	membrane palmitoylated protein 5	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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