Symbol:
RBAK
Name:
RB associated KRAB zinc finger
RGD ID:
12416472
Description:
ENCODES a protein that exhibits metal ion binding (inferred); zinc ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); ASSOCIATED WITH Baraitser-Winter syndrome 1 (ortholog); megacolon (ortholog); prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
LOC489877; uncharacterized protein LOC489877; uncharacterized protein RBAK; zinc finger protein 316
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 12,072,465 - 12,097,422 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 12,073,368 - 12,093,811 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 18,326,735 - 18,342,501 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 12,166,066 - 12,194,774 (+) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 6 12,033,522 - 12,049,283 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 11,954,564 - 11,982,773 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 12,207,419 - 12,259,386 (+) NCBI UU_Cfam_GSD_1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
RBAK Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 12,072,465 - 12,097,422 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 12,073,368 - 12,093,811 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 18,326,735 - 18,342,501 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 12,166,066 - 12,194,774 (+) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 6 12,033,522 - 12,049,283 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 11,954,564 - 11,982,773 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 12,207,419 - 12,259,386 (+) NCBI UU_Cfam_GSD_1.0
RBAK Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 5,045,860 - 5,069,487 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 5,045,821 - 5,069,487 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 5,085,491 - 5,109,118 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 5,052,079 - 5,075,645 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 7 5,044,901 - 5,068,467 (+) NCBI Celera Cytogenetic Map 7 p22.1 NCBI HuRef 7 5,000,481 - 5,024,148 (+) NCBI HuRef CHM1_1 7 5,085,039 - 5,108,706 (+) NCBI CHM1_1 T2T-CHM13v2.0 7 5,163,659 - 5,187,282 (+) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 5,131,807 - 5,155,474 (+) NCBI
Rbak Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 143,157,941 - 143,166,530 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 143,157,941 - 143,166,530 (-) Ensembl GRCm39 Ensembl GRCm38 5 143,172,186 - 143,180,775 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 143,172,186 - 143,180,775 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 143,933,867 - 143,942,422 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 143,437,326 - 143,445,915 (-) NCBI MGSCv36 mm8 Celera 5 140,216,911 - 140,225,466 (-) NCBI Celera Cytogenetic Map 5 G2 NCBI cM Map 5 81.98 NCBI
Rbak Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 16,488,895 - 16,502,523 (+) NCBI GRCr8 mRatBN7.2 12 11,375,314 - 11,388,937 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 11,375,318 - 11,388,934 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 12 12,184,277 - 12,196,488 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 12,807,555 - 12,819,766 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 11,833,653 - 11,845,864 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 13,428,648 - 13,442,279 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 13,428,685 - 13,442,286 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 15,468,852 - 15,482,466 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 11,748,333 - 11,760,544 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 12 13,168,595 - 13,180,802 (+) NCBI Celera Cytogenetic Map 12 p11 NCBI
RBAK Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 10,013,378 - 10,037,654 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 58,338,781 - 58,358,815 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 5,304,827 - 5,328,372 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 5,332,884 - 5,356,307 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 5,344,120 - 5,356,307 (+) Ensembl panpan1.1 panPan2
Rbak
RBAK Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 4,422,784 - 4,439,945 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 4,422,481 - 4,439,943 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 144,137,154 - 144,154,400 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
RBAK
Rbak
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
6
5
5
23
22
16
6
6
6
6
33
22
12
14
10
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSCAFT00000048422 ⟹ ENSCAFP00000040690
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 6 12,085,556 - 12,093,811 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00000049871 ⟹ ENSCAFP00000042457
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 6 12,073,368 - 12,093,811 (+) Ensembl
RefSeq Acc Id:
XM_038478287 ⟹ XP_038334215
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UMICH_Zoey_3.1 6 12,033,522 - 12,049,283 (+) NCBI
RefSeq Acc Id:
XM_038478288 ⟹ XP_038334216
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UMICH_Zoey_3.1 6 12,047,568 - 12,049,283 (+) NCBI
RefSeq Acc Id:
XM_038539540 ⟹ XP_038395468
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 6 12,243,623 - 12,259,386 (+) NCBI
RefSeq Acc Id:
XM_038539541 ⟹ XP_038395469
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 6 12,230,840 - 12,259,386 (+) NCBI
RefSeq Acc Id:
XM_038539542 ⟹ XP_038395470
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 6 12,231,395 - 12,259,386 (+) NCBI
RefSeq Acc Id:
XM_038539543 ⟹ XP_038395471
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 6 12,207,419 - 12,259,386 (+) NCBI
RefSeq Acc Id:
XM_038539545 ⟹ XP_038395473
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 6 12,257,671 - 12,259,386 (+) NCBI
RefSeq Acc Id:
XM_038542211 ⟹ XP_038398139
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source Dog10K_Boxer_Tasha 6 18,326,735 - 18,342,501 (-) NCBI
RefSeq Acc Id:
XM_038542221 ⟹ XP_038398149
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source Dog10K_Boxer_Tasha 6 18,326,735 - 18,328,450 (-) NCBI
RefSeq Acc Id:
XM_038603624 ⟹ XP_038459552
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 6 11,967,467 - 11,982,773 (+) NCBI
RefSeq Acc Id:
XM_038603625 ⟹ XP_038459553
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 6 11,954,564 - 11,982,773 (+) NCBI
RefSeq Acc Id:
XM_038603626 ⟹ XP_038459554
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 6 11,954,968 - 11,982,773 (+) NCBI
RefSeq Acc Id:
XM_038603627 ⟹ XP_038459555
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 6 11,981,059 - 11,982,773 (+) NCBI
RefSeq Acc Id:
XM_038668326 ⟹ XP_038524254
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 6 12,179,007 - 12,194,774 (+) NCBI
RefSeq Acc Id:
XM_038668327 ⟹ XP_038524255
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 6 12,166,066 - 12,194,774 (+) NCBI
RefSeq Acc Id:
XM_038668328 ⟹ XP_038524256
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 6 12,166,477 - 12,194,774 (+) NCBI
RefSeq Acc Id:
XM_038668329 ⟹ XP_038524257
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 6 12,193,059 - 12,194,774 (+) NCBI
RefSeq Acc Id:
XR_005326736
Type:
NON-CODING
Position:
Dog Assembly Chr Position (strand) Source UMICH_Zoey_3.1 6 12,048,004 - 12,049,283 (+) NCBI
RefSeq Acc Id:
XR_005360624
Type:
NON-CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 6 12,258,107 - 12,259,386 (+) NCBI
RefSeq Acc Id:
XR_005361988
Type:
NON-CODING
Position:
Dog Assembly Chr Position (strand) Source Dog10K_Boxer_Tasha 6 18,326,735 - 18,328,014 (-) NCBI
RefSeq Acc Id:
XR_005395153
Type:
NON-CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 6 11,981,494 - 11,982,773 (+) NCBI
RefSeq Acc Id:
XR_005428289
Type:
NON-CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 6 12,193,495 - 12,194,774 (+) NCBI
Ensembl Acc Id:
ENSCAFP00000042457 ⟸ ENSCAFT00000049871
Ensembl Acc Id:
ENSCAFP00000040690 ⟸ ENSCAFT00000048422
RefSeq Acc Id:
XP_038334215 ⟸ XM_038478287
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038334216 ⟸ XM_038478288
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038459553 ⟸ XM_038603625
- Peptide Label:
isoform X4
RefSeq Acc Id:
XP_038459554 ⟸ XM_038603626
- Peptide Label:
isoform X4
RefSeq Acc Id:
XP_038459552 ⟸ XM_038603624
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038459555 ⟸ XM_038603627
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038524255 ⟸ XM_038668327
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038524256 ⟸ XM_038668328
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038524254 ⟸ XM_038668326
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038524257 ⟸ XM_038668329
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038398139 ⟸ XM_038542211
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038398149 ⟸ XM_038542221
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038395471 ⟸ XM_038539543
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038395469 ⟸ XM_038539541
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038395470 ⟸ XM_038539542
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038395468 ⟸ XM_038539540
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038395473 ⟸ XM_038539545
- Peptide Label:
isoform X3
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2017-09-12
RBAK
RB associated KRAB zinc finger
LOC489877
RB-associated KRAB zinc finger protein
Symbol and/or name change
5135510 APPROVED
