CTDP1 (CTD phosphatase subunit 1)

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Gene: CTDP1 (CTD phosphatase subunit 1) Canis lupus familiaris

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Symbol:

CTDP1

Name:

CTD phosphatase subunit 1

RGD ID:

12401377

Description:

ENCODES a protein that exhibits hydrolase activity (inferred); RNA polymerase II CTD heptapeptide repeat phosphatase activity (inferred); Tat protein binding (inferred); INVOLVED IN negative regulation of cell growth involved in cardiac muscle cell development (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Burn-McKeown syndrome (ortholog); Charcot-Marie-Tooth disease (ortholog); chromosome 18q deletion syndrome (ortholog); FOUND IN centrosome (inferred); intracellular membrane-bounded organelle (inferred); midbody (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

RNA polymerase II subunit A C-terminal domain phosphatase

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CTDP1 (CTD phosphatase subunit 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ctdp1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ctdp1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ctdp1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CTDP1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ctdp1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CTDP1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CTDP1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ctdp1 (CTD phosphatase subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	886,973 - 945,994 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	762,020 - 946,142 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	1,890,781 - 1,949,811 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	686,920 - 745,968 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	563,434 - 745,698 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	745,299 - 798,384 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	685,224 - 744,377 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	856,454 - 915,492 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Burn-McKeown syndrome (ISO)

Charcot-Marie-Tooth disease (ISO)

chromosome 18q deletion syndrome (ISO)

Congenital Cataracts, Facial Dysmorphism, and Neuropathy (ISO)

intestinal volvulus (ISO)

Neurodevelopmental Disorders (ISO)

Oculootofacial Dysplasia (ISO)

pulmonary valve stenosis (ISO)

Volvulus Of Midgut (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

exit from mitosis (IEA)

negative regulation of cell growth involved in cardiac muscle cell development (ISO)

positive regulation by host of viral transcription (IEA)

protein dephosphorylation (ISO)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

centrosome (IEA)

intracellular membrane-bounded organelle (IEA)

midbody (IEA)

nucleoplasm (IEA)

nucleus (IEA)

protein-containing complex (IEA)

spindle (IEA)

spindle midzone (IEA)

spindle pole (IEA)

Molecular Function

hydrolase activity (IEA)

protein binding (ISO)

RNA polymerase II CTD heptapeptide repeat phosphatase activity (IEA)

Tat protein binding (IEA)

TFIIF-class transcription factor complex binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

RNA polymerase II transcription pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CTDP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	886,973 - 945,994 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	762,020 - 946,142 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	1,890,781 - 1,949,811 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	686,920 - 745,968 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	563,434 - 745,698 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	745,299 - 798,384 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	685,224 - 744,377 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	856,454 - 915,492 (-)	NCBI		UU_Cfam_GSD_1.0

CTDP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	79,676,768 - 79,756,625 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	79,679,803 - 79,754,503 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	77,439,803 - 77,516,625 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	75,540,789 - 75,615,495 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	75,540,852 - 75,615,495	NCBI
Celera	18	74,215,047 - 74,287,164 (+)	NCBI		Celera
Cytogenetic Map	18	q23	NCBI
HuRef	18	74,064,930 - 74,138,466 (+)	NCBI		HuRef
CHM1_1	18	77,434,835 - 77,507,005 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	79,950,566 - 80,031,824 (+)	NCBI		T2T-CHM13v2.0

Ctdp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	80,451,174 - 80,522,959 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	80,451,174 - 80,512,910 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	80,407,959 - 80,478,739 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	80,407,959 - 80,469,695 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	80,604,698 - 80,666,406 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	80,570,018 - 80,631,726 (-)	NCBI		MGSCv36	mm8
Celera	18	81,529,536 - 81,591,205 (-)	NCBI		Celera
Cytogenetic Map	18	E3	NCBI
cM Map	18	53.48	NCBI

Ctdp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	76,129,243 - 76,193,404 (-)	NCBI		GRCr8
mRatBN7.2	18	73,854,277 - 73,916,232 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	73,854,282 - 73,916,457 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	75,956,857 - 76,017,952 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	76,626,207 - 76,687,291 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	74,471,831 - 74,532,918 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	76,922,913 - 76,985,095 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	76,922,934 - 76,984,203 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	71,827,648 - 71,889,829 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	77,304,752 - 77,365,895 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	77,378,694 - 77,439,016 (-)	NCBI
Celera	18	72,513,356 - 72,574,466 (-)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI

Ctdp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	62,817,974 - 62,914,276 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	62,817,822 - 62,914,250 (+)	NCBI	ChiLan1.0	ChiLan1.0

CTDP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	97,299,366 - 97,377,470 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	82,991,978 - 83,070,099 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	73,279,510 - 73,357,718 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	76,646,641 - 76,720,928 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	76,646,641 - 76,722,573 (+)	Ensembl	panpan1.1		panPan2

Ctdp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	15,048,180 - 15,085,958 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936616	369,893 - 407,093 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936616	369,306 - 407,083 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTDP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	145,769,771 - 145,811,678 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	145,769,763 - 145,811,673 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	311,558,184 - 311,582,528 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CTDP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	479,476 - 549,546 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	478,543 - 544,258 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666060	25,723,426 - 25,796,410 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ctdp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624806	621,804 - 719,942 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624806	621,087 - 720,044 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CTDP1
487 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005615279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005615282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005615285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038463123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038653837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038653838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038653839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038653840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038653841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038653842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_533365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000000012 ⟹ ENSCAFP00000000011

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	887,406 - 945,737 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000072357 ⟹ ENSCAFP00000065181

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	892,576 - 945,737 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000079013 ⟹ ENSCAFP00000053805

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	892,576 - 913,429 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000080007 ⟹ ENSCAFP00000051283

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	762,020 - 945,737 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000084187 ⟹ ENSCAFP00000044691

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	899,032 - 945,737 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000090738 ⟹ ENSCAFP00000065442

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	892,576 - 946,142 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845000078 ⟹ ENSCAFP00845000059

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	563,434 - 745,698 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845000080 ⟹ ENSCAFP00845000061

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	692,539 - 745,698 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845000083 ⟹ ENSCAFP00845000062

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	692,539 - 745,698 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845000091 ⟹ ENSCAFP00845000066

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	692,539 - 743,407 (-)	Ensembl

RefSeq Acc Id:

XM_005615279 ⟹ XP_005615336

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	886,973 - 945,889 (-)	NCBI
Dog10K_Boxer_Tasha	1	1,890,781 - 1,949,552 (-)	NCBI

Sequence:

show sequence

GCCGGGCGGCGGGTGGAAGCCGGTGCCGGAGCGCGAATTGCCGGGCGGTCGTCTTCGCCTCCCG
GGCCGGGGCCGCCGTCCCGCCCGCGATGGGCGCCGGGCCCTGAGCGCCCAGTCCGCCGACCTTC
CCGCAGCGACCCCGCCCGGCCGCGATGGAGGCGCCGCCCGCGGGCCGCGTTCCCGCCGAGGGCG
CCCCGCCGGCGGCCGTGGCCGAGGTGCGCTGCCCGGGCCCCGGGCCGCTGCGCCTGCTCGAGTG
GAGGGTTGCGGCGGGCGCGGCCGTGCGCATCGGCTCGGTGTTGGCGGTGTGTGAGGCCGCCGCC
TCCGCGCAGCCCGCGGGGTCCGCCCCTGCCCGCGCCGGCTCCGGGGGCTGCGTGCGCGCCGAGC
GCAGGCTGAGGTCGGAGCGTGCCGGTGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGT
GGTCCCCGGGGCGGTTCTGGTACGGTTGGAAGGATGTAGCCACCCGGTTGTCATGAAAGGCCTG
TGTGCTGAGTGCGGCCAGGACCTAACCCAGCTGCAGAGTAAGAACGGGCAGCAGCAGGTCCCTC
TGTCCACAGCCACTGTGTCCATGGTGCACAGCGTCCCGGAGCTGATGGTGAGCTCTGAGCAAGC
TGAGCAGCTGGGAAGGGAAGACCAGCAGCGTCTACATCGAAACAGAAAGCTGGTGCTCATGGTG
GACTTGGACCAGACGCTGATCCACACGACCGAGCAGCACTGCCAGCAGATGTCGAACAAAGGCA
TCTTCCACTTCCAGCTGGGCCGGGGCGAGCCAATGCTGCACACCCGCGTGCGTCCCCACTGCAG
GGAGTTCCTGGAGAAGATTGCCAGGCTGTACGAGCTTCATGTCTTCACCTTTGGGAGCCGGCTG
TATGCCCACACCATTGCAGGCTTTTTAGACCCTGAAAAGAAGCTTTTTTCTCATCGAATATTAT
CAAGGGACGAATGTATTGACCCGTTTTCTAAAACAGGGAACCTCAGAAATCTCTTTCCCTGTGG
AGACTCAATGGTCTGCATCATTGATGATCGAGAAGATGTCTGGAAGTTTGCCCCCAATCTGATC
ACCGTGAAGAAATACGTCTACTTCCAGGGCATAGGAGACATCAACGCTCCCTCTGGGTCTCGGG
AGTCCCAGGCAAGAAGGAAAGTAAATCAGTCTTCAAGAGGTGCTGATGGCCCAGAACAAGCTCC
GTCCATCAGGGAGATCGAGGAAGGACGGCAGGTTTCTGGGGTTGAGCAAAGTAATGGCCTTGGG
AAGCCCATGAGGGAGCTCAATGGGGGCGCCTCTCCACGAGGGGACTGGCCCCTGCCTGGGCAGG
AGGAGGAGAGAGGAGCCCGGCCCACCACCCGTGGCCCCTTGGCTGATGGCAAGGGGCCCCCCGC
CTGTGCTCAGCAGCATGGTCGGACATTGCCGGAAAAGCGACCTGCTCAGGGCACGGCCAGTGGT
GACCTGGACTTTGACCTCTCCAGCGACAGCGAATCAGACGCCCAGTCATCTGATGGTGAAAGCG
GGGAGGGGAAAAGCCTGGAAAGGCCTCAAGGAGCACGAGATGCAGGAAAGGCGGCACAGCGGGG
CGGCCCCTCTGGCCCAGGAGGGGAGAGGCCCACAGGAGTGAGTCCATGTGCAGAGTCAGCCCCA
GATGCGCAGGAGGAGGGCGAGCGGGATGGCCTATGCGGGCTGGCCGGTGGCTCCGCGGACAGGA
AGGAAGCCGAGACGGAGTCGCAGAACAGCGAGCAGTCGGGCATCACGGCGGGCGAGTCTCTGGA
CCAGAGCGTGGAGGAAGAGGAAGATGACGAGGACGACGGGGACGAGGACGACCACCTGGTCTAC
CTGGAGGAGATCCTTGCCCGAGTGCATTCCGACTACTATGCCAAATATGACCGGTACCTCCGTG
GGGACAGCCAGGAAGCCCCCGACATAAGGAAGATCGTCCCAGAGCTCAAGAGCAGAGTGCTGGC
AGACGTTGCCATAATATTTAGTGGGCTACACCCAACAAATTTTCCGATCGAGAAGACACGGGAG
CATTACCATGCCACGGCCCTTGGAGCCAAGATCCTCACTCAGCTAGTGCTGGACCCTGACAACC
CCGACAGGGCCACCCACCTGATCGCGGCACGTGCAGGCACAGAGAAGGTGCGCCAGGCCCAGGA
GTGTGGGCAGCTGCATGTGGTCAACCCCGACTGGCTATGGAGCTGCCTGGAGCGCTGGGACAGG
GTGGAGGAGCAGCTCTTCCCTCTCAGGGACGACTATGGCCGAGCGCAGAGAGAAGACGGCCCAG
CAGCCTTTCCTGACAGGCAGGGTGCACTTCCCACTGCCTTGTTCCACCCGACGCCCGTCCACCC
CAGGACCCAACCAGGGCCGGAAGTTCGCATCTATGACGCCAATACGGGCAAGCTCATCCGGAAA
GGTGCTGTGGGCCCTGGGCCCCCTGGCTCCCTGGCGGTGCACACGGAGCACTCCTCCTTCAGAG
TGGTTCAGCCGCCGCGGCAGATGCTTGCGCAAGAGCTGCCAGATAGCCGACCTGGAGAGCAGCC
CGGCCCCAGTGGACGGAAGCGACAGCCCAGCATGTCAGAGACAATGCCGCTGTACACGCTGTGT
AAGGAGGACTTAGAGAGTATGGACAAAGAGGTGGATGACATCCTAGGAGAGGGCAGTGACGACA
GCGACAATGAGAAGAGGAGACCAGAGGAGGAGCGGAAGGAGCGGCCCCCACCCCGGGAGCCCCA
GGCCACACCCGAGGCCACACCAAGCAGCGAGAGGACCAGGGCAGGCAGCCGGGGGCCCAGGTGC
TGCTTCCAGCTCCTGATGCGGTTGGGCTGCACGGGATGATCTGTGTCCTCAGTCACCTCACCAG
GGTTGGTCTTTAGTGAATGTCCTAGACAGAGCTGCCACTTCCCACACCCCTCACAGGCCAGCAG
GGCCATGTCTGTGGACAGAACCTTCCAGGAGCCCTGCAGGCCACCAGCCTTCCCTGACCGTCTC
CAGGACCTGAGTCCCGCACTCAATGGACTGACCTTTCAAATCCTGCCCTGTCCTCGTGCATGTG
GATGACCAGTCATGGTCCCAAGACAGGAAGATACTCTCCTTCCCTGCGGGCCATTCCTAGATAA
GGTGTGGACCCCCAGAGTGCGGGCTGGGTGCAGTGCACACACTCTGGCCACCTCCCTGCAAGAC
TTGGGCACCTGCCTGGTCAGGCGGCGTTTTCTCCACCTCGGGCAACATGTGCATACAGCAGGGG
CTCAGTAAAGGCTGGAGAAGATTC

hide sequence

RefSeq Acc Id:

XM_005615285 ⟹ XP_005615342

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	901,349 - 945,889 (-)	NCBI
Dog10K_Boxer_Tasha	1	1,905,159 - 1,949,552 (-)	NCBI

Sequence:

show sequence

GCCGGGCGGCGGGTGGAAGCCGGTGCCGGAGCGCGAATTGCCGGGCGGTCGTCTTCGCCTCCCG
GGCCGGGGCCGCCGTCCCGCCCGCGATGGGCGCCGGGCCCTGAGCGCCCAGTCCGCCGACCTTC
CCGCAGCGACCCCGCCCGGCCGCGATGGAGGCGCCGCCCGCGGGCCGCGTTCCCGCCGAGGGCG
CCCCGCCGGCGGCCGTGGCCGAGGTGCGCTGCCCGGGCCCCGGGCCGCTGCGCCTGCTCGAGTG
GAGGGTTGCGGCGGGCGCGGCCGTGCGCATCGGCTCGGTGTTGGCGGTGTGTGAGGCCGCCGCC
TCCGCGCAGCCCGCGGGGTCCGCCCCTGCCCGCGCCGGCTCCGGGGGCTGCGTGCGCGCCGAGC
GCAGGCTGAGGTCGGAGCGTGCCGGTGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGT
GGTCCCCGGGGCGGTTCTGGTACGGTTGGAAGGATGTAGCCACCCGGTTGTCATGAAAGGCCTG
TGTGCTGAGTGCGGCCAGGACCTAACCCAGCTGCAGAGTAAGAACGGGCAGCAGCAGGTCCCTC
TGTCCACAGCCACTGTGTCCATGGTGCACAGCGTCCCGGAGCTGATGGTGAGCTCTGAGCAAGC
TGAGCAGCTGGGAAGGGAAGACCAGCAGCGTCTACATCGAAACAGAAAGCTGGTGCTCATGGTG
GACTTGGACCAGACGCTGATCCACACGACCGAGCAGCACTGCCAGCAGATGTCGAACAAAGGCA
TCTTCCACTTCCAGCTGGGCCGGGGCGAGCCAATGCTGCACACCCGCGTGCGTCCCCACTGCAG
GGAGTTCCTGGAGAAGATTGCCAGGCTGTACGAGCTTCATGTCTTCACCTTTGGGAGCCGGCTG
TATGCCCACACCATTGCAGGCTTTTTAGACCCTGAAAAGAAGCTTTTTTCTCATCGAATATTAT
CAAGGGACGAATGTATTGACCCGTTTTCTAAAACAGGGAACCTCAGAAATCTCTTTCCCTGTGG
AGACTCAATGGTCTGCATCATTGATGATCGAGAAGATGTCTGGAAGTTTGCCCCCAATCTGATC
ACCGTGAAGAAATACGTCTACTTCCAGGGCATAGGAGACATCAACGCTCCCTCTGGGTCTCGGG
AGTCCCAGGCAAGAAGGAAAGTAAATCAGTCTTCAAGAGGTGCTGATGGCCCAGAACAAGCTCC
GTCCATCAGGGAGATCGAGGAAGGACGGCAGGTTTCTGGGGTTGAGCAAAGTAATGGCCTTGGG
AAGCCCATGAGGGAGCTCAATGGGGGCGCCTCTCCACGAGGGGACTGGCCCCTGCCTGGGCAGG
AGGAGGAGAGAGGAGCCCGGCCCACCACCCGTGGCCCCTTGGCTGATGGCAAGGGGCCCCCCGC
CTGTGCTCAGCAGCATGGTCGGACATTGCCGGAAAAGCGACCTGCTCAGGGCACGGCCAGTGGT
GACCTGGACTTTGACCTCTCCAGCGACAGCGAATCAGACGCCCAGTCATCTGATGGTGAAAGCG
GGGAGGGGAAAAGCCTGGAAAGGCCTCAAGGAGCACGAGATGCAGGAAAGGCGGCACAGCGGGG
CGGCCCCTCTGGCCCAGGAGGGGAGAGGCCCACAGGAGTGAGTCCATGTGCAGAGTCAGCCCCA
GATGCGCAGGAGGAGGGCGAGCGGGATGGCCTATGCGGGCTGGCCGGTGGCTCCGCGGACAGGA
AGGAAGCCGAGACGGAGTCGCAGAACAGCGAGCAGTCGGGCATCACGGCGGGCGAGTCTCTGGA
CCAGAGCGTGGAGGAAGAGGAAGATGACGAGGACGACGGGGACGAGGACGACCACCTGGTCTAC
CTGGAGGAGATCCTTGCCCGAGTGCATTCCGACTACTATGCCAAATATGACCGGTACCTCCGTG
GGGACAGCCAGGAAGCCCCCGACATAAGGAAGATCGTCCCAGAGCTCAAGAGCAGAGTGCTGGC
AGACGTTGCCATAATATTTAGTGGGCTACACCCAACAAATTTTCCGATCGAGAAGACACGGGAG
CATTACCATGCCACGGCCCTTGGAGCCAAGATCCTCACTCAGCTAGTGCTGGACCCTGACAACC
CCGACAGGGCCACCCACCTGATCGCGGCACGTGCAGGCACAGAGAAGGTGCGCCAGGCCCAGGA
GTGTGGGCAGCTGCATGTGGTCAACCCCGACTGGCTATGGAGCTGCCTGGAGCGCTGGGACAGG
GTGGAGGAGCAGCTCTTCCCTCTCAGGGACGACTATGGCCGAGCGCAGAGAGAAGACGGCCCAG
CAGCCTTTCCTGACAGGCAGGGTGCACTTCCCACTGCCTTGTTCCACCCGACGCCCGTCCACCC
CAGGACCCAACCAGGGCCGGAAGTTCGCATCTATGACGCCAATACGGGCAAGCTCATCCGGAAA
GGTGCTGTGGGCCCTGGGCCCCCTGGCTCCCTGGCGGTGCACACGGAGCACTCCTCCTTCAGGT
GGATGACATCCTAGGAGAGGGCAGTGACGACAGCGACAATGAGAAGAGGAGACCAGAGGAGGAG
CGGAAGGAGCGGCCCCCACCCCGGGAGCCCCAGGCCACACCCGAGGCCACACCAAGCAGCGAGA
GGACCAGGGCAGGCAGCCGGGG

hide sequence

RefSeq Acc Id:

XM_022408189 ⟹ XP_022263897

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	897,001 - 945,890 (-)	NCBI
Dog10K_Boxer_Tasha	1	1,900,838 - 1,949,552 (-)	NCBI

Sequence:

show sequence

GGCCGGGCGGCGGGTGGAAGCCGGTGCCGGAGCGCGAATTGCCGGGCGGTCGTCTTCGCCTCCC
GGGCCGGGGCCGCCGTCCCGCCCGCGATGGGCGCCGGGCCCTGAGCGCCCAGTCCGCCGACCTT
CCCGCAGCGACCCCGCCCGGCCGCGATGGAGGCGCCGCCCGCGGGCCGCGTTCCCGCCGAGGGC
GCCCCGCCGGCGGCCGTGGCCGAGGTGCGCTGCCCGGGCCCCGGGCCGCTGCGCCTGCTCGAGT
GGAGGGTTGCGGCGGGCGCGGCCGTGCGCATCGGCTCGGTGTTGGCGGTGTGTGAGGCCGCCGC
CTCCGCGCAGCCCGCGGGGTCCGCCCCTGCCCGCGCCGGCTCCGGGGGCTGCGTGCGCGCCGAG
CGCAGGCTGAGGTCGGAGCGTGCCGGTGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGG
TGGTCCCCGGGGCGGTTCTGGTACGGTTGGAAGGATGTAGCCACCCGGTTGTCATGAAAGGCCT
GTGTGCTGAGTGCGGCCAGGACCTAACCCAGCTGCAGAGTAAGAACGGGCAGCAGCAGGTCCCT
CTGTCCACAGCCACTGTGTCCATGGTGCACAGCGTCCCGGAGCTGATGGTGAGCTCTGAGCAAG
CTGAGCAGCTGGGAAGGGAAGACCAGCAGCGTCTACATCGAAACAGAAAGCTGGTGCTCATGGT
GGACTTGGACCAGACGCTGATCCACACGACCGAGCAGCACTGCCAGCAGATGTCGAACAAAGGC
ATCTTCCACTTCCAGCTGGGCCGGGGCGAGCCAATGCTGCACACCCGCGTGCGTCCCCACTGCA
GGGAGTTCCTGGAGAAGATTGCCAGGCTGTACGAGCTTCATGTCTTCACCTTTGGGAGCCGGCT
GTATGCCCACACCATTGCAGGCTTTTTAGACCCTGAAAAGAAGCTTTTTTCTCATCGAATATTA
TCAAGGGACGAATGTATTGACCCGTTTTCTAAAACAGGGAACCTCAGAAATCTCTTTCCCTGTG
GAGACTCAATGGTCTGCATCATTGATGATCGAGAAGATGTCTGGAAGTTTGCCCCCAATCTGAT
CACCGTGAAGAAATACGTCTACTTCCAGGGCATAGGAGACATCAACGCTCCCTCTGGGTCTCGG
GAGTCCCAGGCAAGAAGGAAAGTAAATCAGTCTTCAAGAGGTGCTGATGGCCCAGAACAAGCTC
CGTCCATCAGGGAGATCGAGGAAGGACGGCAGGTTTCTGGGGTTGAGCAAAGTAATGGCCTTGG
GAAGCCCATGAGGGAGCTCAATGGGGGCGCCTCTCCACGAGGGGACTGGCCCCTGCCTGGGCAG
GAGGAGGAGAGAGGAGCCCGGCCCACCACCCGTGGCCCCTTGGCTGATGGCAAGGGGCCCCCCG
CCTGTGCTCAGCAGCATGGTCGGACATTGCCGGAAAAGCGACCTGCTCAGGGCACGGCCAGTGG
TGACCTGGACTTTGACCTCTCCAGCGACAGCGAATCAGACGCCCAGTCATCTGATGGTGAAAGC
GGGGAGGGGAAAAGCCTGGAAAGGCCTCAAGGAGCACGAGATGCAGGAAAGGCGGCACAGCGGG
GCGGCCCCTCTGGCCCAGGAGGGGAGAGGCCCACAGGAGTGAGTCCATGTGCAGAGTCAGCCCC
AGATGCGCAGGAGGAGGGCGAGCGGGATGGCCTATGCGGGCTGGCCGGTGGCTCCGCGGACAGG
AAGGAAGCCGAGACGGAGTCGCAGAACAGCGAGCAGTCGGGCATCACGGCGGGCGAGTCTCTGG
ACCAGAGCGTGGAGGAAGAGGAAGATGACGAGGACGACGGGGACGAGGACGACCACCTGGTCTA
CCTGGAGGAGATCCTTGCCCGAGTGCATTCCGACTACTATGCCAAATATGACCGGTACCTCCGT
GGGGACAGCCAGGAAGCCCCCGACATAAGGAAGATCGTCCCAGAGCTCAAGAGCAGAGTGCTGG
CAGACGTTGCCATAATATTTAGTGGGCTACACCCAACAAATTTTCCGATCGAGAAGACACGGGA
GCATTACCATGCCACGGCCCTTGGAGCCAAGATCCTCACTCAGCTAGTGCTGGACCCTGACAAC
CCCGACAGGGCCACCCACCTGATCGCGGCACGTGCAGGCACAGAGAAGGTGCGCCAGGCCCAGG
AGTGTGGGCAGCTGCATGTGGTCAACCCCGACTGGCTATGGAGCTGCCTGGAGCGCTGGGACAG
GGTGGAGGAGCAGCTCTTCCCTCTCAGGGACGACTATGGCCGAGCGCAGAGAGAAGACGGCCCA
GCAGCCTTTCCTGACAGGCAGGGTGCACTTCCCACTGCCTTGTTCCACCCGACGCCCGTCCACC
CCAGGACCCAACCAGGGCCGGAAGTTCGCATCTATGACGCCAATACGGGCAAGCTCATCCGGAA
AGGTGCTGTGGGCCCTGGGCCCCCTGGCTCCCTGGCGGTGCACACGGAGCACTCCTCCTTCAGA
GTGGTTCAGCCGCCGCGGCAGATGCTTGCGCAAGAGCTGCCAGATAGCCGACCTGGAGAGCAGC
CCGGCCCCAGTGGACGGAAGCGACAGCCCAGCATGTCAGAGACAATGCCGCTGTACACGCTGTG
TAAGGAGGACTTAGAGAGTATGGACAAAGAGGTGGATGACATCCTAGGAGAGGGCAGTGACGAC
AGCGACAATGAGAAGAGGAGACCAGAGGAGGAGCGGAAGGAGCGGCCCCCACCCCGGGAGCCCC
AGGCCACACCCGAGGCCACACCAAGCAGCGAGAGGACCAGGGCAGGCAGCCGGGGGCCCAGGGC
TGTGCTCAGGCTGGACCCTCAGAGGCTTCCCCCTAAGGAAAGTGACTTTGCCAGAACAGCCAAG
CTGGTCATTAGGCACACAGCAGCTGCCCTGGCCACAGAGAGGCCTGACCCAGCTGCTGCAGCAC
AGGAACCACAAGGCCTGATTCCACACAATGGAAAAGAGGCGGTGGGAGAAGTTGCTGGTGTGCA
CGGCCCAACCTTGGAGCCCACAGAGCGACTCCCACATGACCTCCAGAGGTGCACAACCACCGCA
GGTGCGCTCCTGGGACCGAAGGACCGTGCAGGGAAATGAGAGCAAGTAGATGGACGATGCTGCG
AAATGCAGCAGGGGCCCAAGGGTCGATGGGAACCACAGAAGAAAGAATTAGCAGTGTGGCATGT
GTGCTCAGAGACATGGGGCCATGGTAAGCTCTCCCACACGCCCACAGCAGGAGCAGAGGAGCAC
GAAGGCAGAAGGGCAGGAAACCTCCACCTGGATGGAAGGCATTCCCACACGCCTAGAAAGCTCG
ACTCCACGCAGGGTCAGCCAGAGATCCACACCCAGACACGTTGTGGTAACAGTGCTGAAAGCTG
GAGACCACACACATGGACAGCCGAGAGCACCTGCAGGACTGGCAGCCAGCTTCCCGTCAGAGAC
ACAGCACATCCAGTATTGGAGAGGACCCCACAACCAGACAAAACTCCATCAAAAGTGATGGTGT
GATGAGGATGTTCCCAGCTGGGATCGTCTCTGAAGAGAATTGGTTGCAAGCCAGCTTGCCTCAC
GAGAAAGACCGAAAGGAGCTGTCGTGCCGGGAAGCCAGGGACCTAGACAGAGCAGCATCCACAC
AAACACCTTGAGCACCGTGCGGGGATCAGGGAATCATCAGGCAGCTTGAATTTATACTTTTCTT
CTTTCTTCATGTCATCGACACAAGGAGCAGTTGTGGACGGTGCTGTGTATGGAGTTGTCAGTGG
GGCCTGTGGTGGAGAGCCGGAGTGTTCACTAGTGACCACACACGGGCCATAGGATCAAGATGCT
T

hide sequence

RefSeq Acc Id:

XM_022408223 ⟹ XP_022263931

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	897,001 - 945,994 (-)	NCBI
Dog10K_Boxer_Tasha	1	1,900,844 - 1,949,811 (-)	NCBI

Sequence:

show sequence

GGCCGGCGCCGCGTCTCCCGCGTGGGGCGGTTCTGGTACGGTTGGAAGGATGTAGCCACCCGGT
TGTCATGAAAGGCCTGTGTGCTGAGTGCGGCCAGGACCTAACCCAGCTGCAGAGTAAGAACGGG
CAGCAGCAGGTCCCTCTGTCCACAGCCACTGTGTCCATGGTGCACAGCGTCCCGGAGCTGATGG
TGAGCTCTGAGCAAGCTGAGCAGCTGGGAAGGGAAGACCAGCAGCGTCTACATCGAAACAGAAA
GCTGGTGCTCATGGTGGACTTGGACCAGACGCTGATCCACACGACCGAGCAGCACTGCCAGCAG
ATGTCGAACAAAGGCATCTTCCACTTCCAGCTGGGCCGGGGCGAGCCAATGCTGCACACCCGCG
TGCGTCCCCACTGCAGGGAGTTCCTGGAGAAGATTGCCAGGCTGTACGAGCTTCATGTCTTCAC
CTTTGGGAGCCGGCTGTATGCCCACACCATTGCAGGCTTTTTAGACCCTGAAAAGAAGCTTTTT
TCTCATCGAATATTATCAAGGGACGAATGTATTGACCCGTTTTCTAAAACAGGGAACCTCAGAA
ATCTCTTTCCCTGTGGAGACTCAATGGTCTGCATCATTGATGATCGAGAAGATGTCTGGAAGTT
TGCCCCCAATCTGATCACCGTGAAGAAATACGTCTACTTCCAGGGCATAGGAGACATCAACGCT
CCCTCTGGGTCTCGGGAGTCCCAGGCAAGAAGGAAAGTAAATCAGTCTTCAAGAGGTGCTGATG
GCCCAGAACAAGCTCCGTCCATCAGGGAGATCGAGGAAGGACGGCAGGTTTCTGGGGTTGAGCA
AAGTAATGGCCTTGGGAAGCCCATGAGGGAGCTCAATGGGGGCGCCTCTCCACGAGGGGACTGG
CCCCTGCCTGGGCAGGAGGAGGAGAGAGGAGCCCGGCCCACCACCCGTGGCCCCTTGGCTGATG
GCAAGGGGCCCCCCGCCTGTGCTCAGCAGCATGGTCGGACATTGCCGGAAAAGCGACCTGCTCA
GGGCACGGCCAGTGGTGACCTGGACTTTGACCTCTCCAGCGACAGCGAATCAGACGCCCAGTCA
TCTGATGGTGAAAGCGGGGAGGGGAAAAGCCTGGAAAGGCCTCAAGGAGCACGAGATGCAGGAA
AGGCGGCACAGCGGGGCGGCCCCTCTGGCCCAGGAGGGGAGAGGCCCACAGGAGTGAGTCCATG
TGCAGAGTCAGCCCCAGATGCGCAGGAGGAGGGCGAGCGGGATGGCCTATGCGGGCTGGCCGGT
GGCTCCGCGGACAGGAAGGAAGCCGAGACGGAGTCGCAGAACAGCGAGCAGTCGGGCATCACGG
CGGGCGAGTCTCTGGACCAGAGCGTGGAGGAAGAGGAAGATGACGAGGACGACGGGGACGAGGA
CGACCACCTGGTCTACCTGGAGGAGATCCTTGCCCGAGTGCATTCCGACTACTATGCCAAATAT
GACCGGTACCTCCGTGGGGACAGCCAGGAAGCCCCCGACATAAGGAAGATCGTCCCAGAGCTCA
AGAGCAGAGTGCTGGCAGACGTTGCCATAATATTTAGTGGGCTACACCCAACAAATTTTCCGAT
CGAGAAGACACGGGAGCATTACCATGCCACGGCCCTTGGAGCCAAGATCCTCACTCAGCTAGTG
CTGGACCCTGACAACCCCGACAGGGCCACCCACCTGATCGCGGCACGTGCAGGCACAGAGAAGG
TGCGCCAGGCCCAGGAGTGTGGGCAGCTGCATGTGGTCAACCCCGACTGGCTATGGAGCTGCCT
GGAGCGCTGGGACAGGGTGGAGGAGCAGCTCTTCCCTCTCAGGGACGACTATGGCCGAGCGCAG
AGAGAAGACGGCCCAGCAGCCTTTCCTGACAGGCAGGGTGCACTTCCCACTGCCTTGTTCCACC
CGACGCCCGTCCACCCCAGGACCCAACCAGGGCCGGAAGTTCGCATCTATGACGCCAATACGGG
CAAGCTCATCCGGAAAGGTGCTGTGGGCCCTGGGCCCCCTGGCTCCCTGGCGGTGCACACGGAG
CACTCCTCCTTCAGAGTGGTTCAGCCGCCGCGGCAGATGCTTGCGCAAGAGCTGCCAGATAGCC
GACCTGGAGAGCAGCCCGGCCCCAGTGGACGGAAGCGACAGCCCAGCATGTCAGAGACAATGCC
GCTGTACACGCTGTGTAAGGAGGACTTAGAGAGTATGGACAAAGAGGTGGATGACATCCTAGGA
GAGGGCAGTGACGACAGCGACAATGAGAAGAGGAGACCAGAGGAGGAGCGGAAGGAGCGGCCCC
CACCCCGGGAGCCCCAGGCCACACCCGAGGCCACACCAAGCAGCGAGAGGACCAGGGCAGGCAG
CCGGGGGCCCAGGGCTGTGCTCAGGCTGGACCCTCAGAGGCTTCCCCCTAAGGAAAGTGACTTT
GCCAGAACAGCCAAGCTGGTCATTAGGCACACAGCAGCTGCCCTGGCCACAGAGAGGCCTGACC
CAGCTGCTGCAGCACAGGAACCACAAGGCCTGATTCCACACAATGGAAAAGAGGCGGTGGGAGA
AGTTGCTGGTGTGCACGGCCCAACCTTGGAGCCCACAGAGCGACTCCCACATGACCTCCAGAGG
TGCACAACCACCGCAGGTGCGCTCCTGGGACCGAAGGACCGTGCAGGGAAATGAGAGCAAGTAG
ATGGACGATGCTGCGAAATGCAGCAGGGGCCCAAGGGTCGATGGGAACCACAGAAGAAAGAATT
AGCAGTGTGGCATGTGTGCTCAGAGACATGGGGCCATGGTAAGCTCTCCCACACGCCCACAGCA
GGAGCAGAGGAGCACGAAGGCAGAAGGGCAGGAAACCTCCACCTGGATGGAAGGCATTCCCACA
CGCCTAGAAAGCTCGACTCCACGCAGGGTCAGCCAGAGATCCACACCCAGACACGTTGTGGTAA
CAGTGCTGAAAGCTGGAGACCACACACATGGACAGCCGAGAGCACCTGCAGGACTGGCAGCCAG
CTTCCCGTCAGAGACACAGCACATCCAGTATTGGAGAGGACCCCACAACCAGACAAAACTCCAT
CAAAAGTGATGGTGTGATGAGGATGTTCCCAGCTGGGATCGTCTCTGAAGAGAATTGGTTGCAA
GCCAGCTTGCCTCACGAGAAAGACCGAAAGGAGCTGTCGTGCCGGGAAGCCAGGGACCTAGACA
GAGCAGCATCCACACAAACACCTTGAGCACCGTGCGGGGATCAGGGAATCATCAGGCAGCTTGA
ATTTATACTTTTCTTCTTTCTTCATGTCATCGACACAAGGAGCAGTTGTGGACGGTGCTGTGTA
TGGAGTTGTCAGTGGGGCCTGTGGTGGAGAGCCGGAGTGTTCACTAGTGACCACACACGGGCCA
TAGGATCAAGATGCTT

hide sequence

RefSeq Acc Id:

XM_038463123 ⟹ XP_038319051

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	1	1,896,400 - 1,949,552 (-)	NCBI

RefSeq Acc Id:

XM_038465119 ⟹ XP_038321047

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	745,299 - 798,384 (-)	NCBI

RefSeq Acc Id:

XM_038525716 ⟹ XP_038381644

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	866,512 - 915,233 (-)	NCBI

RefSeq Acc Id:

XM_038525717 ⟹ XP_038381645

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	862,073 - 915,233 (-)	NCBI

RefSeq Acc Id:

XM_038525718 ⟹ XP_038381646

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	866,518 - 915,492 (-)	NCBI

RefSeq Acc Id:

XM_038525719 ⟹ XP_038381647

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	862,073 - 915,218 (-)	NCBI

RefSeq Acc Id:

XM_038525720 ⟹ XP_038381648

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	856,454 - 915,233 (-)	NCBI

RefSeq Acc Id:

XM_038525721 ⟹ XP_038381649

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	870,833 - 915,233 (-)	NCBI

RefSeq Acc Id:

XM_038590005 ⟹ XP_038445933

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	695,431 - 744,122 (-)	NCBI

RefSeq Acc Id:

XM_038590006 ⟹ XP_038445934

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	690,792 - 744,122 (-)	NCBI

RefSeq Acc Id:

XM_038590007 ⟹ XP_038445935

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	695,437 - 744,377 (-)	NCBI

RefSeq Acc Id:

XM_038590008 ⟹ XP_038445936

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	690,792 - 744,107 (-)	NCBI

RefSeq Acc Id:

XM_038590009 ⟹ XP_038445937

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	685,224 - 744,122 (-)	NCBI

RefSeq Acc Id:

XM_038590010 ⟹ XP_038445938

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	699,754 - 744,122 (-)	NCBI

RefSeq Acc Id:

XM_038653837 ⟹ XP_038509765

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	696,977 - 745,713 (-)	NCBI

RefSeq Acc Id:

XM_038653838 ⟹ XP_038509766

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	692,539 - 745,713 (-)	NCBI

RefSeq Acc Id:

XM_038653839 ⟹ XP_038509767

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	696,983 - 745,968 (-)	NCBI

RefSeq Acc Id:

XM_038653840 ⟹ XP_038509768

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	692,539 - 745,698 (-)	NCBI

RefSeq Acc Id:

XM_038653841 ⟹ XP_038509769

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	686,920 - 745,713 (-)	NCBI

RefSeq Acc Id:

XM_038653842 ⟹ XP_038509770

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	701,299 - 745,713 (-)	NCBI

RefSeq Acc Id:

XM_533365 ⟹ XP_533365

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	892,592 - 945,737 (-)	NCBI
Dog10K_Boxer_Tasha	1	1,896,400 - 1,949,537 (-)	NCBI

Sequence:

show sequence

ATGGAGGCGCCGCCCGCGGGCCGCGTTCCCGCCGAGGGCGCCCCGCCGGCGGCCGTGGCCGAGG
TGCGCTGCCCGGGCCCCGGGCCGCTGCGCCTGCTCGAGTGGAGGGTTGCGGCGGGCGCGGCCGT
GCGCATCGGCTCGGTGTTGGCGGTGTGTGAGGCCGCCGCCTCCGCGCAGCCCGCGGGGTCCGCC
CCTGCCCGCGCCGGCTCCGGGGGCTGCGTGCGCGCCGAGCGCAGGCTGAGGTCGGAGCGTGCCG
GTGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGTGGTCCCCGGGGCGGTTCTGGTACG
GTTGGAAGGATGTAGCCACCCGGTTGTCATGAAAGGCCTGTGTGCTGAGTGCGGCCAGGACCTA
ACCCAGCTGCAGAGTAAGAACGGGCAGCAGCAGGTCCCTCTGTCCACAGCCACTGTGTCCATGG
TGCACAGCGTCCCGGAGCTGATGGTGAGCTCTGAGCAAGCTGAGCAGCTGGGAAGGGAAGACCA
GCAGCGTCTACATCGAAACAGAAAGCTGGTGCTCATGGTGGACTTGGACCAGACGCTGATCCAC
ACGACCGAGCAGCACTGCCAGCAGATGTCGAACAAAGGCATCTTCCACTTCCAGCTGGGCCGGG
GCGAGCCAATGCTGCACACCCGCGTGCGTCCCCACTGCAGGGAGTTCCTGGAGAAGATTGCCAG
GCTGTACGAGCTTCATGTCTTCACCTTTGGGAGCCGGCTGTATGCCCACACCATTGCAGGCTTT
TTAGACCCTGAAAAGAAGCTTTTTTCTCATCGAATATTATCAAGGGACGAATGTATTGACCCGT
TTTCTAAAACAGGGAACCTCAGAAATCTCTTTCCCTGTGGAGACTCAATGGTCTGCATCATTGA
TGATCGAGAAGATGTCTGGAAGTTTGCCCCCAATCTGATCACCGTGAAGAAATACGTCTACTTC
CAGGGCATAGGAGACATCAACGCTCCCTCTGGGTCTCGGGAGTCCCAGGCAAGAAGGAAAGTAA
ATCAGTCTTCAAGAGGTGCTGATGGCCCAGAACAAGCTCCGTCCATCAGGGAGATCGAGGAAGG
ACGGCAGGTTTCTGGGGTTGAGCAAAGTAATGGCCTTGGGAAGCCCATGAGGGAGCTCAATGGG
GGCGCCTCTCCACGAGGGGACTGGCCCCTGCCTGGGCAGGAGGAGGAGAGAGGAGCCCGGCCCA
CCACCCGTGGCCCCTTGGCTGATGGCAAGGGGCCCCCCGCCTGTGCTCAGCAGCATGGTCGGAC
ATTGCCGGAAAAGCGACCTGCTCAGGGCACGGCCAGTGGTGACCTGGACTTTGACCTCTCCAGC
GACAGCGAATCAGACGCCCAGTCATCTGATGGTGAAAGCGGGGAGGGGAAAAGCCTGGAAAGGC
CTCAAGGAGCACGAGATGCAGGAAAGGCGGCACAGCGGGGCGGCCCCTCTGGCCCAGGAGGGGA
GAGGCCCACAGGAGTGAGTCCATGTGCAGAGTCAGCCCCAGATGCGCAGGAGGAGGGCGAGCGG
GATGGCCTATGCGGGCTGGCCGGTGGCTCCGCGGACAGGAAGGAAGCCGAGACGGAGTCGCAGA
ACAGCGAGCAGTCGGGCATCACGGCGGGCGAGTCTCTGGACCAGAGCGTGGAGGAAGAGGAAGA
TGACGAGGACGACGGGGACGAGGACGACCACCTGGTCTACCTGGAGGAGATCCTTGCCCGAGTG
CATTCCGACTACTATGCCAAATATGACCGGTACCTCCGTGGGGACAGCCAGGAAGCCCCCGACA
TAAGGAAGATCGTCCCAGAGCTCAAGAGCAGAGTGCTGGCAGACGTTGCCATAATATTTAGTGG
GCTACACCCAACAAATTTTCCGATCGAGAAGACACGGGAGCATTACCATGCCACGGCCCTTGGA
GCCAAGATCCTCACTCAGCTAGTGCTGGACCCTGACAACCCCGACAGGGCCACCCACCTGATCG
CGGCACGTGCAGGCACAGAGAAGGTGCGCCAGGCCCAGGAGTGTGGGCAGCTGCATGTGGTCAA
CCCCGACTGGCTATGGAGCTGCCTGGAGCGCTGGGACAGGGTGGAGGAGCAGCTCTTCCCTCTC
AGGGACGACTATGGCCGAGCGCAGAGAGAAGACGGCCCAGCAGCCTTTCCTGACAGGCAGGGTG
CACTTCCCACTGCCTTGTTCCACCCGACGCCCGTCCACCCCAGGACCCAACCAGGGCCGGAAGT
TCGCATCTATGACGCCAATACGGGCAAGCTCATCCGGAAAGGTGCTGTGGGCCCTGGGCCCCCT
GGCTCCCTGGCGGTGCACACGGAGCACTCCTCCTTCAGAGTGGTTCAGCCGCCGCGGCAGATGC
TTGCGCAAGAGCTGCCAGATAGCCGACCTGGAGAGCAGCCCGGCCCCAGTGGACGGAAGCGACA
GCCCAGCATGTCAGAGACAATGCCGCTGTACACGCTGTGTAAGGAGGACTTAGAGAGTATGGAC
AAAGAGGTGGATGACATCCTAGGAGAGGGCAGTGACGACAGCGACAATGAGAAGAGGAGACCAG
AGGAGGAGCGGAAGGAGCGGCCCCCACCCCGGGAGCCCCAGGCCACACCCGAGGCCACACCAAG
CAGCGAGAGGACCAGGGCAGGCAGCCGGGGGCCCAGAGGCCACAAGCGGAAGCTGCCCGAGGAG
GACGCCGGCAGCGCATCCAGCGGGGAGTCCAGCGGGGAGGACGAGGAGGGCAGCAGCTCAGAGG
CAGACGAGATGGCCGCAGCGCTTGAGGCAGAGCTCAACGACCTCATGTGACCTGTGGGGCAGGG
CGCAGGGCAGACACCGCTCTATCCCTGGGGGGCTCCAGGCCGCATGGGCCCTCGCCTGAGGTTT
CCTTTTCTCCGGGAAGACATGTATATTTGCAGAGCTCCACATACAGAAACAATAATTTTGCAGA
AATAGGTGTTTTTAGAGGTTTTACTACAGAAGGTCTACTTTTCTAAGGGACAGTGTCCTGGGAG
GTGGTGTGCCAAAGATGCCGCAGTGGCCCACACAGCCTGGTATGCAGTGGGCAGGCAGGACATG
GGGCGGCAGCCAGAGCTGCCCCTGTGGGCCAGGCAGCGGGCGGGTGCACGGGGCCCTCCTCCTC
CAGGACACAGATGTAAAGTTTTGTATATCTATTTCGCATTTGACCCACCAAGCGGATTTCTCTT
TCGTTTAATAAAACTCCTTTTTGTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005615336	(Get FASTA)	NCBI Sequence Viewer
	XP_005615342	(Get FASTA)	NCBI Sequence Viewer
	XP_022263897	(Get FASTA)	NCBI Sequence Viewer
	XP_022263931	(Get FASTA)	NCBI Sequence Viewer
	XP_038319051	(Get FASTA)	NCBI Sequence Viewer
	XP_038321047	(Get FASTA)	NCBI Sequence Viewer
	XP_038381644	(Get FASTA)	NCBI Sequence Viewer
	XP_038381645	(Get FASTA)	NCBI Sequence Viewer
	XP_038381646	(Get FASTA)	NCBI Sequence Viewer
	XP_038381647	(Get FASTA)	NCBI Sequence Viewer
	XP_038381648	(Get FASTA)	NCBI Sequence Viewer
	XP_038381649	(Get FASTA)	NCBI Sequence Viewer
	XP_038445933	(Get FASTA)	NCBI Sequence Viewer
	XP_038445934	(Get FASTA)	NCBI Sequence Viewer
	XP_038445935	(Get FASTA)	NCBI Sequence Viewer
	XP_038445936	(Get FASTA)	NCBI Sequence Viewer
	XP_038445937	(Get FASTA)	NCBI Sequence Viewer
	XP_038445938	(Get FASTA)	NCBI Sequence Viewer
	XP_038509765	(Get FASTA)	NCBI Sequence Viewer
	XP_038509766	(Get FASTA)	NCBI Sequence Viewer
	XP_038509767	(Get FASTA)	NCBI Sequence Viewer
	XP_038509768	(Get FASTA)	NCBI Sequence Viewer
	XP_038509769	(Get FASTA)	NCBI Sequence Viewer
	XP_038509770	(Get FASTA)	NCBI Sequence Viewer
	XP_533365	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000000011.6
	ENSCAFP00000044691.2
	ENSCAFP00000065181.1
	ENSCAFP00000065442.1
	ENSCAFP00030003548.1
	ENSCAFP00030003608.1
	ENSCAFP00030003648.1
	ENSCAFP00030003690.1
	ENSCAFP00030003719.1
	ENSCAFP00030003756.1
	ENSCAFP00040000017.1
	ENSCAFP00040000018.1
	ENSCAFP00845000059
	ENSCAFP00845000059.1
	ENSCAFP00845000061.1
	ENSCAFP00845000062
	ENSCAFP00845000062.1
	ENSCAFP00845000066.1

RefSeq Acc Id:	XP_005615336 ⟸ XM_005615279
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0PW22 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAPPAGRVPAEGAPPAAVAEVRCPGPGPLRLLEWRVAAGAAVRIGSVLAVCEAAASAQPAGSA PARAGSGGCVRAERRLRSERAGVVRELCAQPGQVVVPGAVLVRLEGCSHPVVMKGLCAECGQDL TQLQSKNGQQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIH TTEQHCQQMSNKGIFHFQLGRGEPMLHTRVRPHCREFLEKIARLYELHVFTFGSRLYAHTIAGF LDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYF QGIGDINAPSGSRESQARRKVNQSSRGADGPEQAPSIREIEEGRQVSGVEQSNGLGKPMRELNG GASPRGDWPLPGQEEERGARPTTRGPLADGKGPPACAQQHGRTLPEKRPAQGTASGDLDFDLSS DSESDAQSSDGESGEGKSLERPQGARDAGKAAQRGGPSGPGGERPTGVSPCAESAPDAQEEGER DGLCGLAGGSADRKEAETESQNSEQSGITAGESLDQSVEEEEDDEDDGDEDDHLVYLEEILARV HSDYYAKYDRYLRGDSQEAPDIRKIVPELKSRVLADVAIIFSGLHPTNFPIEKTREHYHATALG AKILTQLVLDPDNPDRATHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPL RDDYGRAQREDGPAAFPDRQGALPTALFHPTPVHPRTQPGPEVRIYDANTGKLIRKGAVGPGPP GSLAVHTEHSSFRVVQPPRQMLAQELPDSRPGEQPGPSGRKRQPSMSETMPLYTLCKEDLESMD KEVDDILGEGSDDSDNEKRRPEEERKERPPPREPQATPEATPSSERTRAGSRGPRCCFQLLMRL GCTG hide sequence

RefSeq Acc Id:	XP_533365 ⟸ XM_533365
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0RAV2 (UniProtKB/TrEMBL), A0A8I3MFD6 (UniProtKB/TrEMBL), A0A8C0PW22 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAPPAGRVPAEGAPPAAVAEVRCPGPGPLRLLEWRVAAGAAVRIGSVLAVCEAAASAQPAGSA PARAGSGGCVRAERRLRSERAGVVRELCAQPGQVVVPGAVLVRLEGCSHPVVMKGLCAECGQDL TQLQSKNGQQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIH TTEQHCQQMSNKGIFHFQLGRGEPMLHTRVRPHCREFLEKIARLYELHVFTFGSRLYAHTIAGF LDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYF QGIGDINAPSGSRESQARRKVNQSSRGADGPEQAPSIREIEEGRQVSGVEQSNGLGKPMRELNG GASPRGDWPLPGQEEERGARPTTRGPLADGKGPPACAQQHGRTLPEKRPAQGTASGDLDFDLSS DSESDAQSSDGESGEGKSLERPQGARDAGKAAQRGGPSGPGGERPTGVSPCAESAPDAQEEGER DGLCGLAGGSADRKEAETESQNSEQSGITAGESLDQSVEEEEDDEDDGDEDDHLVYLEEILARV HSDYYAKYDRYLRGDSQEAPDIRKIVPELKSRVLADVAIIFSGLHPTNFPIEKTREHYHATALG AKILTQLVLDPDNPDRATHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPL RDDYGRAQREDGPAAFPDRQGALPTALFHPTPVHPRTQPGPEVRIYDANTGKLIRKGAVGPGPP GSLAVHTEHSSFRVVQPPRQMLAQELPDSRPGEQPGPSGRKRQPSMSETMPLYTLCKEDLESMD KEVDDILGEGSDDSDNEKRRPEEERKERPPPREPQATPEATPSSERTRAGSRGPRGHKRKLPEE DAGSASSGESSGEDEEGSSSEADEMAAALEAELNDLM hide sequence

RefSeq Acc Id:	XP_005615342 ⟸ XM_005615285
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0PNA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAPPAGRVPAEGAPPAAVAEVRCPGPGPLRLLEWRVAAGAAVRIGSVLAVCEAAASAQPAGSA PARAGSGGCVRAERRLRSERAGVVRELCAQPGQVVVPGAVLVRLEGCSHPVVMKGLCAECGQDL TQLQSKNGQQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIH TTEQHCQQMSNKGIFHFQLGRGEPMLHTRVRPHCREFLEKIARLYELHVFTFGSRLYAHTIAGF LDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYF QGIGDINAPSGSRESQARRKVNQSSRGADGPEQAPSIREIEEGRQVSGVEQSNGLGKPMRELNG GASPRGDWPLPGQEEERGARPTTRGPLADGKGPPACAQQHGRTLPEKRPAQGTASGDLDFDLSS DSESDAQSSDGESGEGKSLERPQGARDAGKAAQRGGPSGPGGERPTGVSPCAESAPDAQEEGER DGLCGLAGGSADRKEAETESQNSEQSGITAGESLDQSVEEEEDDEDDGDEDDHLVYLEEILARV HSDYYAKYDRYLRGDSQEAPDIRKIVPELKSRVLADVAIIFSGLHPTNFPIEKTREHYHATALG AKILTQLVLDPDNPDRATHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPL RDDYGRAQREDGPAAFPDRQGALPTALFHPTPVHPRTQPGPEVRIYDANTGKLIRKGAVGPGPP GSLAVHTEHSSFRWMTS hide sequence

RefSeq Acc Id:	XP_022263931 ⟸ XM_022408223
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3RNW2 (UniProtKB/TrEMBL), A0A8P0NV18 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKGLCAECGQDLTQLQSKNGQQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKL VLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRVRPHCREFLEKIARLYELHVFTF GSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFA PNLITVKKYVYFQGIGDINAPSGSRESQARRKVNQSSRGADGPEQAPSIREIEEGRQVSGVEQS NGLGKPMRELNGGASPRGDWPLPGQEEERGARPTTRGPLADGKGPPACAQQHGRTLPEKRPAQG TASGDLDFDLSSDSESDAQSSDGESGEGKSLERPQGARDAGKAAQRGGPSGPGGERPTGVSPCA ESAPDAQEEGERDGLCGLAGGSADRKEAETESQNSEQSGITAGESLDQSVEEEEDDEDDGDEDD HLVYLEEILARVHSDYYAKYDRYLRGDSQEAPDIRKIVPELKSRVLADVAIIFSGLHPTNFPIE KTREHYHATALGAKILTQLVLDPDNPDRATHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLE RWDRVEEQLFPLRDDYGRAQREDGPAAFPDRQGALPTALFHPTPVHPRTQPGPEVRIYDANTGK LIRKGAVGPGPPGSLAVHTEHSSFRVVQPPRQMLAQELPDSRPGEQPGPSGRKRQPSMSETMPL YTLCKEDLESMDKEVDDILGEGSDDSDNEKRRPEEERKERPPPREPQATPEATPSSERTRAGSR GPRAVLRLDPQRLPPKESDFARTAKLVIRHTAAALATERPDPAAAAQEPQGLIPHNGKEAVGEV AGVHGPTLEPTERLPHDLQRCTTTAGALLGPKDRAGK hide sequence

RefSeq Acc Id:	XP_022263897 ⟸ XM_022408189
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LYS3 (UniProtKB/TrEMBL), A0A8C0PW22 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAPPAGRVPAEGAPPAAVAEVRCPGPGPLRLLEWRVAAGAAVRIGSVLAVCEAAASAQPAGSA PARAGSGGCVRAERRLRSERAGVVRELCAQPGQVVVPGAVLVRLEGCSHPVVMKGLCAECGQDL TQLQSKNGQQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIH TTEQHCQQMSNKGIFHFQLGRGEPMLHTRVRPHCREFLEKIARLYELHVFTFGSRLYAHTIAGF LDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYF QGIGDINAPSGSRESQARRKVNQSSRGADGPEQAPSIREIEEGRQVSGVEQSNGLGKPMRELNG GASPRGDWPLPGQEEERGARPTTRGPLADGKGPPACAQQHGRTLPEKRPAQGTASGDLDFDLSS DSESDAQSSDGESGEGKSLERPQGARDAGKAAQRGGPSGPGGERPTGVSPCAESAPDAQEEGER DGLCGLAGGSADRKEAETESQNSEQSGITAGESLDQSVEEEEDDEDDGDEDDHLVYLEEILARV HSDYYAKYDRYLRGDSQEAPDIRKIVPELKSRVLADVAIIFSGLHPTNFPIEKTREHYHATALG AKILTQLVLDPDNPDRATHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPL RDDYGRAQREDGPAAFPDRQGALPTALFHPTPVHPRTQPGPEVRIYDANTGKLIRKGAVGPGPP GSLAVHTEHSSFRVVQPPRQMLAQELPDSRPGEQPGPSGRKRQPSMSETMPLYTLCKEDLESMD KEVDDILGEGSDDSDNEKRRPEEERKERPPPREPQATPEATPSSERTRAGSRGPRAVLRLDPQR LPPKESDFARTAKLVIRHTAAALATERPDPAAAAQEPQGLIPHNGKEAVGEVAGVHGPTLEPTE RLPHDLQRCTTTAGALLGPKDRAGK hide sequence

Ensembl Acc Id:

ENSCAFP00000044691 ⟸ ENSCAFT00000084187

Ensembl Acc Id:

ENSCAFP00000051283 ⟸ ENSCAFT00000080007

Ensembl Acc Id:

ENSCAFP00000053805 ⟸ ENSCAFT00000079013

Ensembl Acc Id:

ENSCAFP00000000011 ⟸ ENSCAFT00000000012

Ensembl Acc Id:

ENSCAFP00000065181 ⟸ ENSCAFT00000072357

Ensembl Acc Id:

ENSCAFP00000065442 ⟸ ENSCAFT00000090738

RefSeq Acc Id:	XP_038321047 ⟸ XM_038465119
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038445937 ⟸ XM_038590009
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038445934 ⟸ XM_038590006
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038445936 ⟸ XM_038590008
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038445933 ⟸ XM_038590005
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038445935 ⟸ XM_038590007
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038445938 ⟸ XM_038590010
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038509769 ⟸ XM_038653841
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0PW22 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038509766 ⟸ XM_038653838
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M5L0 (UniProtKB/TrEMBL), A0A8C0RAX0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038509768 ⟸ XM_038653840
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0RAV2 (UniProtKB/TrEMBL), A0A8I3MFD6 (UniProtKB/TrEMBL), A0A8C0PW22 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038509765 ⟸ XM_038653837
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LYS3 (UniProtKB/TrEMBL), A0A8C0PW22 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038509767 ⟸ XM_038653839
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3RNW2 (UniProtKB/TrEMBL), A0A8P0NV18 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038509770 ⟸ XM_038653842
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0PNA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038319051 ⟸ XM_038463123
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M5L0 (UniProtKB/TrEMBL), A0A8C0RAX0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381648 ⟸ XM_038525720
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0PW22 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381645 ⟸ XM_038525717
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M5L0 (UniProtKB/TrEMBL), A0A8C0RAX0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381647 ⟸ XM_038525719
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0PW22 (UniProtKB/TrEMBL), A0A8C0RAV2 (UniProtKB/TrEMBL), A0A8I3MFD6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381644 ⟸ XM_038525716
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LYS3 (UniProtKB/TrEMBL), A0A8C0PW22 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381646 ⟸ XM_038525718
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3RNW2 (UniProtKB/TrEMBL), A0A8P0NV18 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381649 ⟸ XM_038525721
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0PNA6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845000061 ⟸ ENSCAFT00845000080

Ensembl Acc Id:

ENSCAFP00845000059 ⟸ ENSCAFT00845000078

Ensembl Acc Id:

ENSCAFP00845000066 ⟸ ENSCAFT00845000091

Ensembl Acc Id:

ENSCAFP00845000062 ⟸ ENSCAFT00845000083

Protein Domains

BRCT FCP1 homology

Promoters

RGD ID:

13681936

Promoter ID:

EPDNEW_C4

Type:

initiation region

Name:

CTDP1_1

Description:

CTD phosphatase subunit 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	945,703 - 945,763	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000010	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030002114	UniProtKB/TrEMBL
	ENSCAFG00040000013	UniProtKB/TrEMBL
	ENSCAFG00845000045	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000000012.6	UniProtKB/TrEMBL
	ENSCAFT00000072357.2	UniProtKB/TrEMBL
	ENSCAFT00000084187.2	UniProtKB/TrEMBL
	ENSCAFT00000090738.2	UniProtKB/TrEMBL
	ENSCAFT00030003996.1	UniProtKB/TrEMBL
	ENSCAFT00030004060.1	UniProtKB/TrEMBL
	ENSCAFT00030004113.1	UniProtKB/TrEMBL
	ENSCAFT00030004159.1	UniProtKB/TrEMBL
	ENSCAFT00030004192.1	UniProtKB/TrEMBL
	ENSCAFT00030004230.1	UniProtKB/TrEMBL
	ENSCAFT00040000018.1	UniProtKB/TrEMBL
	ENSCAFT00040000019.1	UniProtKB/TrEMBL
	ENSCAFT00845000078	ENTREZGENE
	ENSCAFT00845000078.1	UniProtKB/TrEMBL
	ENSCAFT00845000080.1	UniProtKB/TrEMBL
	ENSCAFT00845000083	ENTREZGENE
	ENSCAFT00845000083.1	UniProtKB/TrEMBL
	ENSCAFT00845000091.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.50.100	UniProtKB/TrEMBL
	3.40.50.1000	UniProtKB/TrEMBL
	3.40.50.10190	UniProtKB/TrEMBL
	S15/NS1, RNA-binding	UniProtKB/TrEMBL
InterPro	BRCT_dom	UniProtKB/TrEMBL
	BRCT_dom_sf	UniProtKB/TrEMBL
	Fcp1	UniProtKB/TrEMBL
	FCP1_C	UniProtKB/TrEMBL
	FCP1_dom	UniProtKB/TrEMBL
	FCP1_euk	UniProtKB/TrEMBL
	HAD-like_sf	UniProtKB/TrEMBL
	HAD_sf	UniProtKB/TrEMBL
NCBI Gene	CTDP1	ENTREZGENE
PANTHER	PTHR23081	UniProtKB/TrEMBL
	RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE	UniProtKB/TrEMBL
Pfam	FCP1_C	UniProtKB/TrEMBL
	NIF	UniProtKB/TrEMBL
PROSITE	BRCT	UniProtKB/TrEMBL
	FCP1	UniProtKB/TrEMBL
SMART	BRCT	UniProtKB/TrEMBL
	CPDc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52113	UniProtKB/TrEMBL
	SSF56784	UniProtKB/TrEMBL
UniProt	A0A8C0LYS3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0M3W5_CANLF	UniProtKB/TrEMBL
	A0A8C0M413_CANLF	UniProtKB/TrEMBL
	A0A8C0M5L0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0PNA6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0PW22	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RAV2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RAX0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3M9Q2_CANLF	UniProtKB/TrEMBL
	A0A8I3M9S1_CANLF	UniProtKB/TrEMBL
	A0A8I3MFD6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RNW2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NV18	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A8P0PE04	UniProtKB/TrEMBL
VGNC ID	VGNC:39692	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

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RGD Manual Annotations