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Gene: CTDP1 (CTD phosphatase subunit 1) Pan paniscus

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Symbol:

CTDP1

Name:

CTD phosphatase subunit 1

RGD ID:

11828754

Description:

ENCODES a protein that exhibits hydrolase activity (inferred); phosphoprotein phosphatase activity (inferred); protein serine/threonine phosphatase activity (inferred); INVOLVED IN negative regulation of cell growth involved in cardiac muscle cell development (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Burn-McKeown syndrome (ortholog); Charcot-Marie-Tooth disease (ortholog); chromosome 18q deletion syndrome (ortholog); FOUND IN centrosome (inferred); intracellular membrane-bounded organelle (inferred); midbody (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

RNA polymerase II subunit A C-terminal domain phosphatase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	97,299,366 - 97,377,470 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	82,991,978 - 83,070,099 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	73,279,510 - 73,357,718 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	76,646,641 - 76,720,928 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	76,646,641 - 76,722,573 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTDP1	Bonobo	Burn-McKeown syndrome		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Burn-McKeown syndrome	ClinVar	PMID:25434003
CTDP1	Bonobo	Charcot-Marie-Tooth disease		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Charcot-Marie-Tooth disease	ClinVar	PMID:14517542 more ...
CTDP1	Bonobo	chromosome 18q deletion syndrome		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Monosomy 18q and deletion 18q	ClinVar	PMID:25741868 and PMID:31690835
CTDP1	Bonobo	Congenital Cataracts, Facial Dysmorphism, and Neuropathy		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:14517542 more ...
CTDP1	Bonobo	intestinal volvulus		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: INTESTINAL MALROTATION and FAMILIAL	ClinVar	PMID:25741868
CTDP1	Bonobo	Neurodevelopmental Disorders		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
CTDP1	Bonobo	Oculootofacial Dysplasia		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: OCULOOTOFACIAL DYSPLASIA	ClinVar	PMID:25434003
CTDP1	Bonobo	pulmonary valve stenosis		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Pulmonary valve stenosis	ClinVar	PMID:25741868
CTDP1	Bonobo	Volvulus Of Midgut		ISO	CTDP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Volvulus of midgut	ClinVar	PMID:25741868

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTDP1	Bonobo	Congenital Cataracts, Facial Dysmorphism, and Neuropathy		ISO	CTDP1 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTDP1	Bonobo	exit from mitosis	involved_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	negative regulation of cell growth involved in cardiac muscle cell development		ISO	Ctdp1 (Rattus norvegicus)	9068941		RGD	PMID:22569295 and REF_RGD_ID:9686371
CTDP1	Bonobo	positive regulation by host of viral transcription	involved_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	protein dephosphorylation	involved_in	ISO	CTDP1 (Homo sapiens)	9068941	PMID:22692537 and PMID:9765293	UniProt	PMID:22692537 and PMID:9765293
CTDP1	Bonobo	regulation of transcription by RNA polymerase II	involved_in	IEA	GO:0008420	150520179		GOC	GO_REF:0000108

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTDP1	Bonobo	centrosome	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	intracellular membrane-bounded organelle	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	midbody	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	nucleoplasm	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	nucleus	located_in	IEA	UniRule:UR001253786	150520179		UniProt	GO_REF:0000104
CTDP1	Bonobo	nucleus	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043
CTDP1	Bonobo	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
CTDP1	Bonobo	nucleus	located_in	IEA	InterPro:IPR011947	150520179		InterPro	GO_REF:0000002
CTDP1	Bonobo	protein-containing complex	part_of	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	spindle	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	spindle midzone	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	spindle pole	located_in	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTDP1	Bonobo	hydrolase activity	enables	IEA	UniProtKB-KW:KW-0378	150520179		UniProt	GO_REF:0000043
CTDP1	Bonobo	phosphoprotein phosphatase activity	enables	IEA	InterPro:IPR011947	150520179		InterPro	GO_REF:0000002
CTDP1	Bonobo	protein binding	enables	ISO	UniProtKB:P35269	9068941	PMID:12732728 and PMID:9765293	IntAct	PMID:12732728 and PMID:9765293
CTDP1	Bonobo	protein binding	enables	ISO	UniProtKB:Q9NVI1	9068941	PMID:31240132	IntAct	PMID:31240132
CTDP1	Bonobo	protein binding	enables	ISO	PR:O08740	9068941	PMID:15226435	MGI	PMID:15226435
CTDP1	Bonobo	protein serine/threonine phosphatase activity	enables	IEA	RHEA:20629 and RHEA:47004	150520179		RHEA	GO_REF:0000116
CTDP1	Bonobo	protein serine/threonine phosphatase activity	enables	IEA	EC:3.1.3.16	150520179		UniProt	GO_REF:0000003
CTDP1	Bonobo	protein serine/threonine phosphatase activity	enables	IEA	ARBA:ARBA00027653	150520179		UniProt	GO_REF:0000117
CTDP1	Bonobo	RNA polymerase II CTD heptapeptide repeat phosphatase activity	enables	IEA	UniRule:UR001253786	150520179		UniProt	GO_REF:0000104
CTDP1	Bonobo	RNA polymerase II CTD heptapeptide repeat phosphatase activity	enables	IEA	PANTHER:PTN000555211 and PANTHER:PTN000555215	150520179		TreeGrafter	GO_REF:0000118
CTDP1	Bonobo	RNA polymerase II CTD heptapeptide repeat phosphatase activity	enables	IEA	InterPro:IPR039189	150520179		InterPro	GO_REF:0000002
CTDP1	Bonobo	RNA polymerase II CTD heptapeptide repeat phosphatase activity	enables	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	Tat protein binding	enables	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107
CTDP1	Bonobo	TFIIF-class transcription factor complex binding	enables	IEA	UniProtKB:Q9Y5B0 and ensembl:ENSP00000484525	150520179		Ensembl	GO_REF:0000107

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CTDP1	Bonobo	RNA polymerase II transcription pathway		ISO	CTDP1 (Homo sapiens)	9068941	pol II carboxyl-terminal domain (CTD)	RGD	PMID:22622228 more ...

PMID:22301074	PMID:30032202

CTDP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	97,299,366 - 97,377,470 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	82,991,978 - 83,070,099 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	73,279,510 - 73,357,718 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	76,646,641 - 76,720,928 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	76,646,641 - 76,722,573 (+)	Ensembl	panpan1.1		panPan2

CTDP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	79,676,768 - 79,756,625 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	79,679,803 - 79,754,503 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	77,439,803 - 77,516,625 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	75,540,789 - 75,615,495 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	75,540,852 - 75,615,495	NCBI
Celera	18	74,215,047 - 74,287,164 (+)	NCBI		Celera
Cytogenetic Map	18	q23	NCBI
HuRef	18	74,064,930 - 74,138,466 (+)	NCBI		HuRef
CHM1_1	18	77,434,835 - 77,507,005 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	79,950,566 - 80,031,824 (+)	NCBI		T2T-CHM13v2.0

Ctdp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	80,451,174 - 80,522,959 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	80,451,174 - 80,512,910 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	80,407,959 - 80,478,739 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	80,407,959 - 80,469,695 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	80,604,698 - 80,666,406 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	80,570,018 - 80,631,726 (-)	NCBI		MGSCv36	mm8
Celera	18	81,529,536 - 81,591,205 (-)	NCBI		Celera
Cytogenetic Map	18	E3	NCBI
cM Map	18	53.48	NCBI

Ctdp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	76,129,243 - 76,193,404 (-)	NCBI		GRCr8
mRatBN7.2	18	73,854,277 - 73,916,232 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	73,854,282 - 73,916,457 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	75,956,857 - 76,017,952 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	76,626,207 - 76,687,291 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	74,471,831 - 74,532,918 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	76,922,913 - 76,985,095 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	76,922,934 - 76,984,203 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	71,827,648 - 71,889,829 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	77,304,752 - 77,365,895 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	77,378,694 - 77,439,016 (-)	NCBI
Celera	18	72,513,356 - 72,574,466 (-)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI

Ctdp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	62,817,974 - 62,914,276 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	62,817,822 - 62,914,250 (+)	NCBI	ChiLan1.0	ChiLan1.0

CTDP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	886,973 - 945,994 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	762,020 - 946,142 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	1,890,781 - 1,949,811 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	686,920 - 745,968 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	563,434 - 745,698 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	745,299 - 798,384 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	685,224 - 744,377 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	856,454 - 915,492 (-)	NCBI		UU_Cfam_GSD_1.0

Ctdp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	15,048,180 - 15,085,958 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936616	369,893 - 407,093 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936616	369,306 - 407,083 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTDP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	145,769,771 - 145,811,678 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	145,769,763 - 145,811,673 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	311,558,184 - 311,582,528 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CTDP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	479,476 - 549,546 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	478,543 - 544,258 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666060	25,723,426 - 25,796,410 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ctdp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624806	621,804 - 719,942 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624806	621,087 - 720,044 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_003805202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034943410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055102372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063597388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000061608 ⟹ ENSPPAP00000038702

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	18	76,646,641 - 76,720,928 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000061623 ⟹ ENSPPAP00000038717

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	18	76,646,778 - 76,720,208 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000061629 ⟹ ENSPPAP00000038723

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	18	76,660,930 - 76,722,573 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000061639 ⟹ ENSPPAP00000038732

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	18	76,660,930 - 76,722,573 (+)	Ensembl

RefSeq Acc Id:

XM_003805202 ⟹ XP_003805250

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	17	97,299,366 - 97,377,470 (+)	NCBI
NHGRI_mPanPan1	18	82,991,981 - 83,070,099 (+)	NCBI
Mhudiblu_PPA_v0	18	73,279,510 - 73,357,718 (+)	NCBI
PanPan1.1	18	76,646,641 - 76,720,928 (+)	NCBI

Sequence:

show sequence

GCGGGCTAGGCGACGGGTGGAAGCCGGTACCGAGAGGAACTACAGCGTCGCCGCCTGGGTTGTGCCGCCGCGGTAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGACCGCCCGCCCGCCCT
CTGTCCGCGATGGAGGTGCCGGCCGCGGGTCGCGTTCCTGCCGAGGGCGCCCCGACGGCGGCTGTGGCCGAGGTGCGCTGCCCGGGGCCCGCGCCGCTGCGCCTGCTGGAGNTGAGGGTGGCGGCGGG
CGCGGCCGTGCGCATCGGCTCGGTGCTGGCCGTGTTCGAGGCCGCCGCCTCCGCGCAGTCCGCCGGGGCTTCTCAGTCCCGTGTAGCCTCCGGGGGCTGCGTGCGCCCCGCGCGGCCGGAACGCAGGC
TGAGGTCGGAGCGCGCGGGCGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGTGAGGTTGGAAGGATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTGCT
GAATGTGGCCAAGACCTCACCCAGTTGCAGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCCACCGTGTCCATGGTGCACAGCGTGCCGGAGTTGATGGTGAGCTCCGAGCAAGCTGAACA
GCTGGGAAGAGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCTGGTGCTCATGGTGGACTTGGACCAGACGTTGATTCACACGACCGAGCAGCACTGTCAGCAGATGTCGAATAAAGGCATCTTTC
ACTTCCAGCTGGGCCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGCTGTACGCA
CACACCATCGCAGGCTTTTTAGACCCCGAGAAGAAGCTTTTTTCTCACCGAATATTATCAAGGGATGAATGTATTGACCCATTTTCTAAAACGGGAAACCTTAGAAATCTCTTTCCTTGTGGAGACTC
AATGGTTTGCATTATTGATGATCGAGAAGATGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGAAGAAATATGTATACTTCCAGGGCACGGGTGATATGAATGCGCCCCCTGGGTCCCGAGAATCTC
AGACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGAGGTCTCAGAGCCATCTCCGCCCGTGAGAGACCCTGAGGGGGGAACGCAGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGCCTGCA
CGGGAGCTGAACGGCAGTGAGGCCGCCACCCCGCGGGACTCACCCCGCCCCGGGAAGCCGGACGAGAGGGACATCTGGCCCCCTGCCCAGGCCCCCACCAGCAGCCGAGAGCTGGCAGGCGCTCCTGA
GCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTCGACTTATCCAGCGACAGCGAAAGCAGCAGTGAGTCCGAGGGCA
CGAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGAAAAGAGGCCGGCAGAAGCCGAAGGCTGCCCCAGAGGGAGCCGGGGCGCTGGCACAGGGCAGTTCCCTGGAGCCGGGGCGGCCTGCA
GCACCGAGTCTCCCCGGAGAGGCCGAGCCTGGCGCGCATGCCCCGGACAAGGAGCCCGAGCTGGGTGGGCAGGAGGAGGGCGAGCGGGATGGCCTCTGCGGCCTGGGCAACGGCTGTGCCGACAGGAA
GGAGGCGGAGACCGAGTCACAGAACAGCGAGCTGTCGGGGGTCACTGCGGGTGAGTCCCTGGACCAGAGCGTGGAGGAGGAGGAGGAGGAGGACACGGATGAGGATGACCACCTCATCTACCTGGAGG
AGATCCTGGTCCGTGTACACACTGACTACTATGCCAAGTATGACCGCTACCTCAACAAGGAGATCGAGGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGTG
GCCATAATTTTCAGTGGGCTACACCCGACAAACTTCCCGATAGAGAAGACGCGGGAGCATTACCACGCCACGGCGCTGGGAGCGAAGATCCTCACTCGGCTGGTGCTGAGCCCCGACGCCCCTGACAG
GGCCACGCACCTGATCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGGAGG
AGCAGCTCTTCCCGCTCAGGGACGATCACACCAAGGCACAGAGGGAGAACAGCCCTGCGGCCTTTCCCGACCGGGAGGGTGTGCCCCCCACCGCCTTGTTCCACCCGATGCCGGTTCTTCCCAAGGCC
CAGCCTGGCCCCGAGGTTCGGATCTACGACTCCAACACGGGGAAGCTCATCAGGACGGGCACCCGGGGGCCCCCTGCGCCCTCCAGCTCCCTACCCATCCGCCAGGAGCCCTCTTCCTTCAGAGCGGT
TCCGCCACCCCAGCCGCAGATGTTTGGCGAAGAGCTGCCTGACGCTCAGGACGGAGAGCAGCCTGGCCCTTCTAGAAGAAAGCGACAGCCCAGTATGTCTGAGACAATGCCGCTGTACACTCTTTGTA
AGGAGGATTTAGAGAGTATGGACAAAGAGGTGGACGACATCCTTGGAGAAGGCAGCGACGACAGCGACAGCGAGAAGAGGAGGCCTGAGGAGCAGGAGGAGGAGCCCCAGCCCCGGAAGCCAGGGACC
CGCAGGGAGCGGATGCTCGGGGCACCGGCGTCCAGCGAGAGGAGCGCAGCAGGGGGCCGGGGGCCCAGAGGCCACAAGAGGAAGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAG
CAACGAGGACGAGGGCAGCAGCTCCGAGGCTGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCGGCGGGCGGGGACTGAAGCCTGACCGACCTCCAGCAGCACT
CGGACGTCCCCAGACCAGCCCTCAGTCTTGGTCCACGCTGCTTTCTTCCCAAAGGACATGTATATTTGCAGAGCTCCACATACAGAAACACATTATTTTGCAGAAATAGGTGTTTTTAAGAAGTTTTA
CTACAGGAATGTCTACTTTTGTAAGTGACAGGTGTTAAAGGCCCGGGCGTGCTGTGCCAGAGAGCTCAGCAGAGGCTCACGTGGCCCGGGCTGCTGCGCCCGCTGTCTCGGTAAGGGGTGGGTTGGTG
TGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGCGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
GAACCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCC
TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTTTATGTCTTGGAGACACCTGATGTAAAGTTTCTGTAAATCTATTTCATATCTGACCCACCAAACAGATTTCT
CTTTAATAAAAATCCTTTTTGTAAGTTCTCT

hide sequence

RefSeq Acc Id:

XM_034943410 ⟹ XP_034799301

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	17	97,299,506 - 97,377,470 (+)	NCBI
NHGRI_mPanPan1	18	82,991,980 - 83,070,099 (+)	NCBI
Mhudiblu_PPA_v0	18	73,279,510 - 73,357,715 (+)	NCBI

RefSeq Acc Id:

XM_055102372 ⟹ XP_054958347

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	17	97,299,506 - 97,359,107 (+)	NCBI
NHGRI_mPanPan1	18	82,991,978 - 83,051,729 (+)	NCBI

RefSeq Acc Id:

XM_063597388 ⟹ XP_063453458

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	17	97,299,506 - 97,359,131 (+)	NCBI


Protein RefSeqs	XP_003805250	(Get FASTA)	NCBI Sequence Viewer
	XP_034799301	(Get FASTA)	NCBI Sequence Viewer
	XP_054958347	(Get FASTA)	NCBI Sequence Viewer
	XP_063453458	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000038702.1
	ENSPPAP00000038717.1
	ENSPPAP00000038723.1
	ENSPPAP00000038732.1

RefSeq Acc Id:	XP_003805250 ⟸ XM_003805202
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9CKP5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEVPAAGRVPAEGAPTAAVAEVRCPGPAPLRLLEXRVAAGAAVRIGSVLAVFEAAASAQSAGASQSRVASGGCVRPARPERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECG QDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTI AGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGTGDMNAPPGSRESQTRKKVNHSRGTEVSEPSPPVRDPEGGTQAPGVEPSNGLEKPAREL NGSEAATPRDSPRPGKPDERDIWPPAQAPTSSRELAGAPEPQGSCAQGGRVAPGQRPAQGATGTDLDFDLSSDSESSSESEGTKSSSSASDGESEGKRGRQKPKAAPEGAGALAQGSSLEPGRPAAPS LPGEAEPGAHAPDKEPELGGQEEGERDGLCGLGNGCADRKEAETESQNSELSGVTAGESLDQSVEEEEEEDTDEDDHLIYLEEILVRVHTDYYAKYDRYLNKEIEEAPDIRKIVPELKSKVLADVAII FSGLHPTNFPIEKTREHYHATALGAKILTRLVLSPDAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWDKVEEQLFPLRDDHTKAQRENSPAAFPDREGVPPTALFHPMPVLPKAQPG PEVRIYDSNTGKLIRTGTRGPPAPSSSLPIRQEPSSFRAVPPPQPQMFGEELPDAQDGEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKRRPEEQEEEPQPRKPGTRRE RMLGAPASSERSAAGGRGPRGHKRKLNEEDAASESSRESSNEDEGSSSEADEMAKALEAELNDLM hide sequence

RefSeq Acc Id:	XP_034799301 ⟸ XM_034943410
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9CKP5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSPPAP00000038717 ⟸ ENSPPAT00000061623

Ensembl Acc Id:

ENSPPAP00000038702 ⟸ ENSPPAT00000061608

Ensembl Acc Id:

ENSPPAP00000038732 ⟸ ENSPPAT00000061639

Protein Domains

BRCT FCP1 homology

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000042068	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000061608.1	UniProtKB/TrEMBL
	ENSPPAT00000061623.1	UniProtKB/TrEMBL
	ENSPPAT00000061629.1	UniProtKB/TrEMBL
	ENSPPAT00000061639.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1000	UniProtKB/TrEMBL
	3.40.50.10190	UniProtKB/TrEMBL
	S15/NS1, RNA-binding	UniProtKB/TrEMBL
InterPro	BRCT_dom	UniProtKB/TrEMBL
	BRCT_dom_sf	UniProtKB/TrEMBL
	Fcp1	UniProtKB/TrEMBL
	FCP1_C	UniProtKB/TrEMBL
	FCP1_dom	UniProtKB/TrEMBL
	FCP1_euk	UniProtKB/TrEMBL
	HAD-like_sf	UniProtKB/TrEMBL
	HAD_sf	UniProtKB/TrEMBL
NCBI Gene	CTDP1	ENTREZGENE
PANTHER	PTHR23081	UniProtKB/TrEMBL
	RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE	UniProtKB/TrEMBL
Pfam	BRCT	UniProtKB/TrEMBL
	FCP1_C	UniProtKB/TrEMBL
	NIF	UniProtKB/TrEMBL
PROSITE	BRCT	UniProtKB/TrEMBL
	FCP1	UniProtKB/TrEMBL
SMART	BRCT	UniProtKB/TrEMBL
	CPDc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52113	UniProtKB/TrEMBL
	SSF56784	UniProtKB/TrEMBL
UniProt	A0A2R9CKN1_PANPA	UniProtKB/TrEMBL
	A0A2R9CKP5	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9CKQ8_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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