USP44 (ubiquitin specific peptidase 44) - Rat Genome Database

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Pathways
Gene: USP44 (ubiquitin specific peptidase 44) Canis lupus familiaris
Analyze
Symbol: USP44
Name: ubiquitin specific peptidase 44
RGD ID: 12395859
Description: ENCODES a protein that exhibits cysteine-type deubiquitinase activity (inferred); deubiquitinase activity (inferred); zinc ion binding (inferred); INVOLVED IN negative regulation of ubiquitin protein ligase activity (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH esophageal cancer (ortholog); sarcoma (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ubiquitin carboxyl-terminal hydrolase 44
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11535,401,486 - 35,454,351 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1535,402,207 - 35,414,261 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1535,788,165 - 35,841,019 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01536,066,187 - 36,119,066 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1536,066,193 - 36,093,614 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11535,339,057 - 35,391,905 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01535,433,598 - 35,486,456 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01535,696,753 - 35,749,591 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
USP44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11535,401,486 - 35,454,351 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1535,402,207 - 35,414,261 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1535,788,165 - 35,841,019 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01536,066,187 - 36,119,066 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1536,066,193 - 36,093,614 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11535,339,057 - 35,391,905 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01535,433,598 - 35,486,456 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01535,696,753 - 35,749,591 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
USP44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381295,516,560 - 95,551,681 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1295,515,926 - 95,553,341 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371295,910,336 - 95,945,252 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361294,435,010 - 94,469,394 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341294,414,016 - 94,447,695NCBI
Celera1295,582,001 - 95,617,069 (-)NCBICelera
Cytogenetic Map12q22NCBI
HuRef1292,978,712 - 93,013,655 (-)NCBIHuRef
CHM1_11295,875,781 - 95,910,674 (-)NCBICHM1_1
T2T-CHM13v2.01295,497,607 - 95,532,730 (-)NCBIT2T-CHM13v2.0
Usp44
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391093,655,831 - 93,696,792 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1093,667,417 - 93,696,791 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381093,819,969 - 93,859,425 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1093,831,555 - 93,858,088 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371093,294,300 - 93,311,283 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361093,261,354 - 93,278,337 (+)NCBIMGSCv36mm8
Celera1095,801,275 - 95,819,046 (+)NCBICelera
Cytogenetic Map10C2NCBI
cM Map1048.67NCBI
Usp44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8730,251,142 - 30,301,185 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl730,251,205 - 30,297,906 (+)EnsemblGRCr8
mRatBN7.2728,364,169 - 28,412,039 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl728,364,033 - 28,410,053 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx730,354,579 - 30,400,607 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0732,516,806 - 32,562,843 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0732,294,256 - 32,340,284 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd732,376,632 - 32,422,701 (+)NCBI
Lyon_Normotensive733,202,645 - 33,248,714 (+)NCBI
Lyon_Hypertensive733,354,525 - 33,400,591 (+)NCBI
F344_StmMcwi731,927,789 - 31,973,861 (+)NCBI
Rnor_6.0734,714,293 - 34,759,352 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl734,744,483 - 34,759,206 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0734,773,627 - 34,818,325 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4730,898,472 - 30,971,342 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera725,461,222 - 25,507,052 (+)NCBICelera
RGSC_v3.1730,965,952 - 30,991,469 (+)NCBI
Cytogenetic Map7q13NCBI
Usp44
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540531,977,602 - 32,006,810 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495540531,977,045 - 32,006,733 (-)NCBIChiLan1.0ChiLan1.0
USP44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210103,592,727 - 103,628,336 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112103,589,117 - 103,624,726 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01293,111,293 - 93,146,889 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11296,503,794 - 96,539,321 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1296,503,794 - 96,536,094 (-)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
Usp44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap1623,394,352 - 23,423,454 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_02440494524,527,677 - 24,572,367 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650711,660,129 - 11,681,366 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493650711,663,069 - 11,692,174 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
USP44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl587,875,851 - 87,889,680 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1587,864,410 - 87,890,913 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2592,044,399 - 92,091,188 (+)NCBISscrofa10.2Sscrofa10.2susScr3
USP44
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap11192,853,184 - 92,886,686 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_023666037154,220,917 - 154,254,742 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.11190,915,107 - 90,950,142 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1190,916,677 - 90,947,456 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Usp44
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475011,697,919 - 11,725,421 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462475011,710,218 - 11,724,529 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl1763,408,297 - 63,422,474 (+)Ensembl
Usp44
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11172,926,528 - 172,940,524 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in USP44
587 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005629240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005629243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005629244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005629247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005629248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022403339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022403340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022403341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_532654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000010298   ⟹   ENSCAFP00000009548
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1535,402,207 - 35,414,261 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845041783   ⟹   ENSCAFP00845032772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1536,066,193 - 36,093,614 (-)Ensembl
RefSeq Acc Id: XM_005629240   ⟹   XP_005629297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,454,351 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,841,019 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005629243   ⟹   XP_005629300
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,454,351 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,841,019 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005629244   ⟹   XP_005629301
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,454,300 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,840,961 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005629247   ⟹   XP_005629304
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,432,351 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,819,020 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005629248   ⟹   XP_005629305
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,428,929 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,815,588 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022403339   ⟹   XP_022259047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,432,267 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,818,937 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022403340   ⟹   XP_022259048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,454,351 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,841,019 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022403341   ⟹   XP_022259049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,439,013 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,825,685 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038496291   ⟹   XP_038352219
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,391,905 (-)NCBI
RefSeq Acc Id: XM_038496292   ⟹   XP_038352220
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,369,821 (-)NCBI
RefSeq Acc Id: XM_038496293   ⟹   XP_038352221
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,391,905 (-)NCBI
RefSeq Acc Id: XM_038496294   ⟹   XP_038352222
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,376,809 (-)NCBI
RefSeq Acc Id: XM_038496295   ⟹   XP_038352223
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,391,905 (-)NCBI
RefSeq Acc Id: XM_038496296   ⟹   XP_038352224
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,369,904 (-)NCBI
RefSeq Acc Id: XM_038496297   ⟹   XP_038352225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,391,847 (-)NCBI
RefSeq Acc Id: XM_038496298   ⟹   XP_038352226
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,376,570 (-)NCBI
RefSeq Acc Id: XM_038496299   ⟹   XP_038352227
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11535,339,057 - 35,366,475 (-)NCBI
RefSeq Acc Id: XM_038558676   ⟹   XP_038414604
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,749,591 (-)NCBI
RefSeq Acc Id: XM_038558677   ⟹   XP_038414605
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,727,502 (-)NCBI
RefSeq Acc Id: XM_038558678   ⟹   XP_038414606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,749,591 (-)NCBI
RefSeq Acc Id: XM_038558679   ⟹   XP_038414607
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,734,490 (-)NCBI
RefSeq Acc Id: XM_038558680   ⟹   XP_038414608
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,749,591 (-)NCBI
RefSeq Acc Id: XM_038558681   ⟹   XP_038414609
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,727,585 (-)NCBI
RefSeq Acc Id: XM_038558682   ⟹   XP_038414610
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,749,533 (-)NCBI
RefSeq Acc Id: XM_038558683   ⟹   XP_038414611
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,734,251 (-)NCBI
RefSeq Acc Id: XM_038558684   ⟹   XP_038414612
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01535,696,753 - 35,724,172 (-)NCBI
RefSeq Acc Id: XM_038622589   ⟹   XP_038478517
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,486,456 (-)NCBI
RefSeq Acc Id: XM_038622590   ⟹   XP_038478518
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,464,363 (-)NCBI
RefSeq Acc Id: XM_038622591   ⟹   XP_038478519
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,486,456 (-)NCBI
RefSeq Acc Id: XM_038622592   ⟹   XP_038478520
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,471,349 (-)NCBI
RefSeq Acc Id: XM_038622593   ⟹   XP_038478521
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,486,456 (-)NCBI
RefSeq Acc Id: XM_038622594   ⟹   XP_038478522
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,464,446 (-)NCBI
RefSeq Acc Id: XM_038622595   ⟹   XP_038478523
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,486,398 (-)NCBI
RefSeq Acc Id: XM_038622596   ⟹   XP_038478524
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,471,110 (-)NCBI
RefSeq Acc Id: XM_038622598   ⟹   XP_038478526
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01535,433,598 - 35,461,025 (-)NCBI
RefSeq Acc Id: XM_038688263   ⟹   XP_038544191
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,119,066 (-)NCBI
RefSeq Acc Id: XM_038688264   ⟹   XP_038544192
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,096,973 (-)NCBI
RefSeq Acc Id: XM_038688265   ⟹   XP_038544193
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,119,066 (-)NCBI
RefSeq Acc Id: XM_038688266   ⟹   XP_038544194
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,103,964 (-)NCBI
RefSeq Acc Id: XM_038688267   ⟹   XP_038544195
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,119,066 (-)NCBI
RefSeq Acc Id: XM_038688268   ⟹   XP_038544196
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,097,056 (-)NCBI
RefSeq Acc Id: XM_038688269   ⟹   XP_038544197
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,119,008 (-)NCBI
RefSeq Acc Id: XM_038688270   ⟹   XP_038544198
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,103,725 (-)NCBI
RefSeq Acc Id: XM_038688271   ⟹   XP_038544199
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01536,066,187 - 36,093,622 (-)NCBI
RefSeq Acc Id: XM_532654   ⟹   XP_532654
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11535,401,486 - 35,439,255 (-)NCBI
Dog10K_Boxer_Tasha1535,788,165 - 35,825,924 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005629297 (Get FASTA)   NCBI Sequence Viewer  
  XP_005629300 (Get FASTA)   NCBI Sequence Viewer  
  XP_005629301 (Get FASTA)   NCBI Sequence Viewer  
  XP_005629304 (Get FASTA)   NCBI Sequence Viewer  
  XP_005629305 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259047 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259048 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259049 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352219 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352220 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352221 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352222 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352223 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352224 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352225 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352226 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352227 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414604 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414605 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414607 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414609 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414610 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414611 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414612 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478517 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478518 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478519 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478520 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478521 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478522 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478523 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478524 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478526 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544191 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544192 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544193 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544194 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544195 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544196 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544197 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544198 (Get FASTA)   NCBI Sequence Viewer  
  XP_038544199 (Get FASTA)   NCBI Sequence Viewer  
  XP_532654 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00845032772
  ENSCAFP00845032772.1
RefSeq Acc Id: XP_005629301   ⟸   XM_005629244
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005629300   ⟸   XM_005629243
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005629297   ⟸   XM_005629240
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_532654   ⟸   XM_532654
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005629304   ⟸   XM_005629247
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005629305   ⟸   XM_005629248
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259048   ⟸   XM_022403340
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259049   ⟸   XM_022403341
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259047   ⟸   XM_022403339
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000009548   ⟸   ENSCAFT00000010298
RefSeq Acc Id: XP_038352221   ⟸   XM_038496293
RefSeq Acc Id: XP_038352223   ⟸   XM_038496295
RefSeq Acc Id: XP_038352219   ⟸   XM_038496291
RefSeq Acc Id: XP_038352225   ⟸   XM_038496297
RefSeq Acc Id: XP_038352222   ⟸   XM_038496294
RefSeq Acc Id: XP_038352226   ⟸   XM_038496298
RefSeq Acc Id: XP_038352224   ⟸   XM_038496296
RefSeq Acc Id: XP_038352220   ⟸   XM_038496292
RefSeq Acc Id: XP_038352227   ⟸   XM_038496299
RefSeq Acc Id: XP_038478519   ⟸   XM_038622591
RefSeq Acc Id: XP_038478521   ⟸   XM_038622593
RefSeq Acc Id: XP_038478517   ⟸   XM_038622589
RefSeq Acc Id: XP_038478523   ⟸   XM_038622595
RefSeq Acc Id: XP_038478520   ⟸   XM_038622592
RefSeq Acc Id: XP_038478524   ⟸   XM_038622596
RefSeq Acc Id: XP_038478522   ⟸   XM_038622594
RefSeq Acc Id: XP_038478518   ⟸   XM_038622590
RefSeq Acc Id: XP_038478526   ⟸   XM_038622598
RefSeq Acc Id: XP_038544193   ⟸   XM_038688265
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544195   ⟸   XM_038688267
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544191   ⟸   XM_038688263
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544197   ⟸   XM_038688269
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544194   ⟸   XM_038688266
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544198   ⟸   XM_038688270
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544196   ⟸   XM_038688268
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544192   ⟸   XM_038688264
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544199   ⟸   XM_038688271
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414606   ⟸   XM_038558678
- UniProtKB: A0A8I3PX43 (UniProtKB/TrEMBL),   A0A8C0LH54 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414608   ⟸   XM_038558680
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414604   ⟸   XM_038558676
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414610   ⟸   XM_038558682
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414607   ⟸   XM_038558679
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414611   ⟸   XM_038558683
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414609   ⟸   XM_038558681
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414605   ⟸   XM_038558677
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414612   ⟸   XM_038558684
- UniProtKB: A0A8C0LH54 (UniProtKB/TrEMBL),   A0A8I3PX43 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845032772   ⟸   ENSCAFT00845041783
Protein Domains
UBP-type   USP


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000006375 Ensembl
  ENSCAFG00845023662 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845041783 ENTREZGENE
  ENSCAFT00845041783.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
  Cysteine proteinases UniProtKB/TrEMBL
InterPro Papain-like_cys_pep_sf UniProtKB/TrEMBL
  Peptidase_C19_UCH UniProtKB/TrEMBL
  Ub_carboxyl-term_hydrolase UniProtKB/TrEMBL
  USP_CS UniProtKB/TrEMBL
  USP_dom UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
  Znf_UBP UniProtKB/TrEMBL
KEGG Report cfa:475430 UniProtKB/TrEMBL
NCBI Gene USP44 ENTREZGENE
PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE UniProtKB/TrEMBL
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 44 UniProtKB/TrEMBL
Pfam UCH UniProtKB/TrEMBL
  zf-UBP UniProtKB/TrEMBL
PROSITE USP_1 UniProtKB/TrEMBL
  USP_2 UniProtKB/TrEMBL
  USP_3 UniProtKB/TrEMBL
  ZF_UBP UniProtKB/TrEMBL
SMART ZnF_UBP UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
  SSF54001 UniProtKB/TrEMBL
UniProt A0A8C0LH54 ENTREZGENE
  A0A8I3PX43 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:48197 ENTREZGENE