DNAH11 (dynein axonemal heavy chain 11) - Rat Genome Database

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Gene: DNAH11 (dynein axonemal heavy chain 11) Canis lupus familiaris
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Symbol: DNAH11
Name: dynein axonemal heavy chain 11
RGD ID: 12295078
Description: ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); dynein intermediate chain binding (inferred); INVOLVED IN cardiac septum morphogenesis (ortholog); cilium movement (ortholog); determination of left/right asymmetry in nervous system (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); autism spectrum disorder (ortholog); cleft palate (ortholog); FOUND IN 9+0 motile cilium (inferred); 9+2 motile cilium (inferred); axoneme (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dynein heavy chain 11, axonemal
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11435,468,080 - 35,784,621 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1435,468,154 - 35,784,806 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1435,010,233 - 35,326,619 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01435,391,909 - 35,710,339 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1435,391,935 - 35,710,334 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11435,511,481 - 35,830,033 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01435,211,138 - 35,527,954 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01435,544,474 - 35,863,246 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DNAH11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11435,468,080 - 35,784,621 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1435,468,154 - 35,784,806 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1435,010,233 - 35,326,619 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01435,391,909 - 35,710,339 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1435,391,935 - 35,710,334 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11435,511,481 - 35,830,033 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01435,211,138 - 35,527,954 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01435,544,474 - 35,863,246 (+)NCBIUU_Cfam_GSD_1.0
DNAH11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38721,543,039 - 21,901,839 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl721,543,039 - 21,901,839 (+)EnsemblGRCh38hg38GRCh38
GRCh37721,582,657 - 21,941,457 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36721,549,358 - 21,907,982 (+)NCBINCBI36Build 36hg18NCBI36
Build 34721,356,072 - 21,714,701NCBI
Celera721,568,334 - 21,927,147 (+)NCBICelera
Cytogenetic Map7p15.3NCBI
HuRef721,468,066 - 21,826,836 (+)NCBIHuRef
CHM1_1721,583,500 - 21,941,892 (+)NCBICHM1_1
T2T-CHM13v2.0721,679,184 - 22,038,139 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2721,634,147 - 21,992,554 (+)NCBI
Dnah11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912117,841,717 - 118,162,778 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12117,841,717 - 118,162,778 (-)EnsemblGRCm39 Ensembl
GRCm3812117,877,982 - 118,199,043 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12117,877,982 - 118,199,043 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712119,116,455 - 119,437,516 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612112,081,403 - 112,243,674 (-)NCBIMGSCv36mm8
MGSCv3612118,322,088 - 118,643,145 (-)NCBIMGSCv36mm8
Cytogenetic Map12F2NCBI
cM Map1263.25NCBI
Dnah11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86144,982,130 - 145,298,523 (-)NCBIGRCr8
mRatBN7.26138,839,175 - 139,155,554 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6138,839,177 - 139,155,536 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.06145,784,893 - 146,099,212 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6145,785,275 - 146,099,053 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06154,698,519 - 155,011,384 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46145,190,931 - 145,516,859 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16145,376,140 - 145,389,155 (-)NCBI
Celera6136,492,481 - 136,807,626 (-)NCBICelera
Cytogenetic Map6q33NCBI
Dnah11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541024,044,886 - 24,352,626 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541024,045,333 - 24,352,626 (+)NCBIChiLan1.0ChiLan1.0
DNAH11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2626,407,257 - 26,765,415 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1774,731,984 - 75,089,431 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0722,228,345 - 22,585,681 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1721,540,932 - 21,897,485 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl721,540,932 - 21,897,485 (+)Ensemblpanpan1.1panPan2
Dnah11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511879,695,026 - 80,008,043 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365467,370,381 - 7,681,020 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365467,370,180 - 7,681,835 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAH11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl990,423,092 - 90,768,353 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1990,420,044 - 90,768,327 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2999,840,344 - 100,218,083 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNAH11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12136,350,606 - 36,722,018 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2136,350,707 - 36,720,511 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604267,858,273 - 68,228,833 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnah11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247398,811,082 - 9,135,815 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247398,810,127 - 9,136,044 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DNAH11
4210 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence


Ensembl Acc Id: ENSCAFT00000004311   ⟹   ENSCAFP00000003990
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1435,468,154 - 35,784,806 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845013978   ⟹   ENSCAFP00845010830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1435,391,935 - 35,710,334 (+)Ensembl
RefSeq Acc Id: XM_022427467   ⟹   XP_022283175
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11435,468,080 - 35,784,621 (+)NCBI
Dog10K_Boxer_Tasha1435,010,233 - 35,326,619 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038494802   ⟹   XP_038350730
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11435,511,481 - 35,830,033 (+)NCBI
RefSeq Acc Id: XM_038557079   ⟹   XP_038413007
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01435,544,474 - 35,863,246 (+)NCBI
RefSeq Acc Id: XM_038621019   ⟹   XP_038476947
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01435,211,138 - 35,527,954 (+)NCBI
RefSeq Acc Id: XM_038686704   ⟹   XP_038542632
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01435,391,909 - 35,710,339 (+)NCBI
RefSeq Acc Id: XP_022283175   ⟸   XM_022427467
- UniProtKB: A0A8P0S8H0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000003990   ⟸   ENSCAFT00000004311
RefSeq Acc Id: XP_038350730   ⟸   XM_038494802
RefSeq Acc Id: XP_038476947   ⟸   XM_038621019
RefSeq Acc Id: XP_038542632   ⟸   XM_038686704
- UniProtKB: A0A8I3MXY8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038413007   ⟸   XM_038557079
- UniProtKB: A0A8I3MXY8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845010830   ⟸   ENSCAFT00845013978
Protein Domains
AAA+ ATPase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000002717 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040005593 UniProtKB/TrEMBL
  ENSCAFG00845007920 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000004311.5 UniProtKB/TrEMBL
  ENSCAFT00040010869.1 UniProtKB/TrEMBL
  ENSCAFT00845013978 ENTREZGENE
  ENSCAFT00845013978.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.2620 UniProtKB/TrEMBL
  1.10.472.130 UniProtKB/TrEMBL
  1.10.8.1220 UniProtKB/TrEMBL
  1.10.8.710 UniProtKB/TrEMBL
  1.10.8.720 UniProtKB/TrEMBL
  1.20.1270.280 UniProtKB/TrEMBL
  1.20.140.100 UniProtKB/TrEMBL
  1.20.58.1120 UniProtKB/TrEMBL
  1.20.920.20 UniProtKB/TrEMBL
  1.20.920.30 UniProtKB/TrEMBL
  3.10.490.20 UniProtKB/TrEMBL
  3.20.180.20 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  6.10.140.1060 UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  AAA_6 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  AAA_lid_11_sf UniProtKB/TrEMBL
  DHC_fam UniProtKB/TrEMBL
  DNAH3_AAA_lid_1 UniProtKB/TrEMBL
  Dynein_2_N UniProtKB/TrEMBL
  Dynein_AAA1S UniProtKB/TrEMBL
  Dynein_AAA5_ext UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_C_barrel UniProtKB/TrEMBL
  Dynein_HC_stalk UniProtKB/TrEMBL
  Dynein_heavy_chain_D4_dom UniProtKB/TrEMBL
  Dynein_heavy_D6_P-loop UniProtKB/TrEMBL
  Dynein_heavy_linker UniProtKB/TrEMBL
  Dynein_heavy_tail UniProtKB/TrEMBL
  Dynein_linker_3 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene DNAH11 ENTREZGENE
PANTHER DYNEIN AXONEMAL HEAVY CHAIN 11 UniProtKB/TrEMBL
  DYNEIN HEAVY CHAIN UniProtKB/TrEMBL
Pfam AAA_6 UniProtKB/TrEMBL
  AAA_7 UniProtKB/TrEMBL
  AAA_8 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_1 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  DHC_N1 UniProtKB/TrEMBL
  DHC_N2 UniProtKB/TrEMBL
  Dynein_AAA_lid UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_heavy UniProtKB/TrEMBL
  PF12777 UniProtKB/TrEMBL
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8C0RYX2_CANLF UniProtKB/TrEMBL
  A0A8I3MXY8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0S8H0 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:40013 ENTREZGENE