DNAH11 (dynein axonemal heavy chain 11) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: DNAH11 (dynein axonemal heavy chain 11) Pan paniscus
Analyze
Symbol: DNAH11
Name: dynein axonemal heavy chain 11
RGD ID: 11690995
Description: ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); dynein intermediate chain binding (inferred); INVOLVED IN cardiac septum morphogenesis (ortholog); cilium movement (ortholog); determination of left/right asymmetry in nervous system (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); autism spectrum disorder (ortholog); cleft palate (ortholog); FOUND IN 9+0 motile cilium (inferred); 9+2 motile cilium (inferred); axoneme (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dynein heavy chain 11, axonemal
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2626,407,257 - 26,765,415 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1774,731,984 - 75,089,431 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0722,228,345 - 22,585,681 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1721,540,932 - 21,897,485 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl721,540,932 - 21,897,485 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DNAH11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2626,407,257 - 26,765,415 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1774,731,984 - 75,089,431 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0722,228,345 - 22,585,681 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1721,540,932 - 21,897,485 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl721,540,932 - 21,897,485 (+)Ensemblpanpan1.1panPan2
DNAH11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38721,543,039 - 21,901,839 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl721,543,039 - 21,901,839 (+)EnsemblGRCh38hg38GRCh38
GRCh37721,582,657 - 21,941,457 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36721,549,358 - 21,907,982 (+)NCBINCBI36Build 36hg18NCBI36
Build 34721,356,072 - 21,714,701NCBI
Celera721,568,334 - 21,927,147 (+)NCBICelera
Cytogenetic Map7p15.3NCBI
HuRef721,468,066 - 21,826,836 (+)NCBIHuRef
CHM1_1721,583,500 - 21,941,892 (+)NCBICHM1_1
T2T-CHM13v2.0721,679,184 - 22,038,139 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2721,634,147 - 21,992,554 (+)NCBI
Dnah11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912117,841,717 - 118,162,778 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12117,841,717 - 118,162,778 (-)EnsemblGRCm39 Ensembl
GRCm3812117,877,982 - 118,199,043 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12117,877,982 - 118,199,043 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712119,116,455 - 119,437,516 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612112,081,403 - 112,243,674 (-)NCBIMGSCv36mm8
MGSCv3612118,322,088 - 118,643,145 (-)NCBIMGSCv36mm8
Cytogenetic Map12F2NCBI
cM Map1263.25NCBI
Dnah11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86144,982,130 - 145,298,523 (-)NCBIGRCr8
mRatBN7.26138,839,175 - 139,155,554 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6138,839,177 - 139,155,536 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.06145,784,893 - 146,099,212 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6145,785,275 - 146,099,053 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06154,698,519 - 155,011,384 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46145,190,931 - 145,516,859 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16145,376,140 - 145,389,155 (-)NCBI
Celera6136,492,481 - 136,807,626 (-)NCBICelera
Cytogenetic Map6q33NCBI
Dnah11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541024,044,886 - 24,352,626 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541024,045,333 - 24,352,626 (+)NCBIChiLan1.0ChiLan1.0
DNAH11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11435,468,080 - 35,784,621 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1435,468,154 - 35,784,806 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1435,010,233 - 35,326,619 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01435,391,909 - 35,710,339 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1435,391,935 - 35,710,334 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11435,511,481 - 35,830,033 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01435,211,138 - 35,527,954 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01435,544,474 - 35,863,246 (+)NCBIUU_Cfam_GSD_1.0
Dnah11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511879,695,026 - 80,008,043 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365467,370,381 - 7,681,020 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365467,370,180 - 7,681,835 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAH11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl990,423,092 - 90,768,353 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1990,420,044 - 90,768,327 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2999,840,344 - 100,218,083 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNAH11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12136,350,606 - 36,722,018 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2136,350,707 - 36,720,511 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604267,858,273 - 68,228,833 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnah11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247398,811,082 - 9,135,815 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247398,810,127 - 9,136,044 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000064101   ⟹   ENSPPAP00000041178
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl721,540,932 - 21,897,485 (+)Ensembl
RefSeq Acc Id: XM_055115753   ⟹   XP_054971728
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2626,407,257 - 26,765,415 (+)NCBI
NHGRI_mPanPan1774,731,984 - 75,089,431 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054971728 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000041178.1
Ensembl Acc Id: ENSPPAP00000041178   ⟸   ENSPPAT00000064101
RefSeq Acc Id: XP_054971728   ⟸   XM_055115753
- UniProtKB: A0A2R9CJI9 (UniProtKB/TrEMBL)
Protein Domains
AAA+ ATPase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043198 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000064101.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.2620 UniProtKB/TrEMBL
  1.10.472.130 UniProtKB/TrEMBL
  1.10.8.1220 UniProtKB/TrEMBL
  1.10.8.710 UniProtKB/TrEMBL
  1.10.8.720 UniProtKB/TrEMBL
  1.20.1270.280 UniProtKB/TrEMBL
  1.20.140.100 UniProtKB/TrEMBL
  1.20.58.1120 UniProtKB/TrEMBL
  1.20.920.20 UniProtKB/TrEMBL
  1.20.920.30 UniProtKB/TrEMBL
  3.10.490.20 UniProtKB/TrEMBL
  3.20.180.20 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  6.10.140.1060 UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  AAA_6 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  AAA_lid_11_sf UniProtKB/TrEMBL
  DHC_fam UniProtKB/TrEMBL
  DNAH3_AAA_lid_1 UniProtKB/TrEMBL
  Dynein_2_N UniProtKB/TrEMBL
  Dynein_AAA1S UniProtKB/TrEMBL
  Dynein_AAA5_ext UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_C_barrel UniProtKB/TrEMBL
  Dynein_HC_stalk UniProtKB/TrEMBL
  Dynein_heavy_chain_D4_dom UniProtKB/TrEMBL
  Dynein_heavy_D6_P-loop UniProtKB/TrEMBL
  Dynein_heavy_linker UniProtKB/TrEMBL
  Dynein_heavy_tail UniProtKB/TrEMBL
  Dynein_linker_3 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene DNAH11 ENTREZGENE
PANTHER DYNEIN AXONEMAL HEAVY CHAIN 11 UniProtKB/TrEMBL
  DYNEIN HEAVY CHAIN UniProtKB/TrEMBL
Pfam AAA_6 UniProtKB/TrEMBL
  AAA_7 UniProtKB/TrEMBL
  AAA_8 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_1 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  DHC_N1 UniProtKB/TrEMBL
  DHC_N2 UniProtKB/TrEMBL
  Dynein_AAA_lid UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_heavy UniProtKB/TrEMBL
  PF12777 UniProtKB/TrEMBL
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A2R9CJI9 ENTREZGENE, UniProtKB/TrEMBL