Dnah11 (dynein, axonemal, heavy chain 11) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Dnah11 (dynein, axonemal, heavy chain 11) Mus musculus
Analyze
Symbol: Dnah11
Name: dynein, axonemal, heavy chain 11
RGD ID: 1620923
MGI Page MGI
Description: Predicted to enable dynein intermediate chain binding activity; dynein light intermediate chain binding activity; and minus-end-directed microtubule motor activity. Acts upstream of or within several processes, including cardiac septum morphogenesis; determination of left/right symmetry; and flagellated sperm motility. Located in 9+0 motile cilium; 9+2 motile cilium; and proximal portion of axoneme. Is expressed in several structures, including future brain; node; and secondary heart field. Used to study Kartagener syndrome; atrioventricular septal defect; primary ciliary dyskinesia 7; and visceral heterotaxy. Human ortholog(s) of this gene implicated in Kartagener syndrome and primary ciliary dyskinesia 7. Orthologous to human DNAH11 (dynein axonemal heavy chain 11).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: av; avc4; b2b1203C; b2b1203Clo; b2b1279C; b2b1279Clo; b2b1289C; b2b1289Clo; b2b1727C; b2b1727Clo; b2b598C; b2b598Clo; Dnahc; Dnahc11; dynein heavy chain 11, axonemal; dynein, axon, heavy chain 11; iv; l; lrd; situs inversus viscerum
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912117,841,717 - 118,162,778 (-)NCBIGRCm39mm39
GRCm39 Ensembl12117,841,717 - 118,162,778 (-)Ensembl
GRCm3812117,877,982 - 118,199,043 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12117,877,982 - 118,199,043 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712119,116,455 - 119,437,516 (-)NCBIGRCm37mm9NCBIm37
MGSCv3612112,081,403 - 112,243,674 (-)NCBImm8
MGSCv3612118,322,088 - 118,643,145 (-)NCBImm8
Cytogenetic Map12F2NCBI
cM Map1263.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abdominal situs ambiguus  (IEA)
abdominal situs inversus  (IEA)
abnormal autopod morphology  (IAGP)
abnormal biliary tract morphology  (IEA)
abnormal cardiovascular system morphology  (IAGP)
abnormal embryo implantation  (IAGP)
abnormal heart atrium auricular region morphology  (IAGP)
abnormal heart atrium morphology  (IAGP)
abnormal heart morphology  (IAGP)
abnormal hepatic portal vein morphology  (IAGP)
abnormal inferior vena cava morphology  (IAGP)
abnormal intestine morphology  (IEA)
abnormal kidney morphology  (IEA)
abnormal left-right axis patterning  (IAGP)
abnormal liver morphology  (IAGP)
abnormal lung lobe morphology  (IEA)
abnormal mitral valve morphology  (IEA)
abnormal motile primary cilium morphology  (IAGP)
abnormal motile primary cilium physiology  (IAGP)
abnormal myocardial trabeculae morphology  (IEA)
abnormal primitive node morphology  (IAGP)
abnormal respiration  (IEA)
abnormal respiratory conducting tube morphology  (IEA)
abnormal respiratory motile cilium physiology  (IEA)
abnormal spleen morphology  (IAGP)
abnormal stomach position or orientation  (IAGP)
abnormal thoracic cavity morphology  (IEA)
abnormal vertebral column morphology  (IEA)
absent nodal flow  (IAGP)
accessory spleen  (IEA)
anophthalmia  (IEA)
atrioventricular septal defect  (IAGP)
biventricular, ambiguous atrioventricular connection  (IEA)
biventricular, discordant atrioventricular connection  (IEA)
common atrioventricular valve  (IEA)
complete atrioventricular septal defect  (IAGP)
d-loop transposition of the great arteries  (IEA)
decreased heart right ventricle size  (IAGP)
decreased litter size  (IAGP)
dextrocardia  (IAGP)
double outlet right ventricle  (IEA)
double outlet right ventricle, ventricular defect committed to aorta  (IEA)
dual inferior vena cava  (IEA)
duplex kidney  (IEA)
edema  (IAGP)
heart left ventricle hypertrophy  (IEA)
heart right ventricle hypertrophy  (IEA)
heterotaxia  (IEA)
hydronephrosis  (IEA)
immotile respiratory cilia  (IEA)
increased physiological sensitivity to xenobiotic  (IAGP)
interrupted aortic arch  (IAGP)
isolation of the left subclavian artery  (IEA)
kidney cyst  (IEA)
left atrial isomerism  (IAGP)
left pulmonary isomerism  (IAGP)
left-sided isomerism  (IEA)
mesocardia  (IAGP)
micrognathia  (IEA)
microphthalmia  (IEA)
muscular ventricular septal defect  (IEA)
no abnormal phenotype detected  (IAGP)
ostium primum atrial septal defect  (IAGP)
perinatal lethality  (IAGP)
polycystic kidney  (IEA)
pulmonary artery hypoplasia  (IAGP)
pulmonary valve stenosis  (IAGP)
reduced fertility  (IAGP)
right aortic arch  (IEA)
right atrial isomerism  (IAGP)
right pulmonary isomerism  (IAGP)
right-sided stomach  (IAGP)
situs inversus  (IAGP)
situs inversus totalis  (IEA)
situs inversus with levocardia  (IEA)
spleen hypoplasia  (IEA)
superior-inferior ventricles  (IEA)
vascular ring  (IEA)
ventricular septal defect  (IEA)
References

Additional References at PubMed
PMID:1021593   PMID:1360279   PMID:1427890   PMID:1638728   PMID:1748282   PMID:1802643   PMID:2365357   PMID:2612382   PMID:2740340   PMID:8367832   PMID:8610011   PMID:8610013  
PMID:9253602   PMID:9348041   PMID:9353118   PMID:9373155   PMID:9438343   PMID:9524576   PMID:9708734   PMID:9739041   PMID:9825674   PMID:9874565   PMID:9988215   PMID:9990851  
PMID:10021341   PMID:10385627   PMID:10549278   PMID:10556073   PMID:10652513   PMID:10678167   PMID:10679931   PMID:10704402   PMID:11180966   PMID:11376488   PMID:11693308   PMID:11900971  
PMID:12097899   PMID:12112458   PMID:12466851   PMID:12477932   PMID:12859898   PMID:14745963   PMID:15499557   PMID:15533812   PMID:15736223   PMID:15889083   PMID:15889094   PMID:15907475  
PMID:16291790   PMID:17011489   PMID:17061268   PMID:17204651   PMID:17251353   PMID:17884984   PMID:17967808   PMID:18414654   PMID:18463632   PMID:18729223   PMID:18773496   PMID:19235720  
PMID:20487527   PMID:20511334   PMID:21098568   PMID:21103351   PMID:21419113   PMID:21677750   PMID:21873635   PMID:22102620   PMID:22233545   PMID:22357932   PMID:22887640   PMID:23357539  
PMID:25807483   PMID:26909801   PMID:27272319   PMID:27305836   PMID:27340223   PMID:28594961   PMID:29768498   PMID:31887266   PMID:32317081   PMID:33139725   PMID:33347437   PMID:34210974  


Genomics

Comparative Map Data
Dnah11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912117,841,717 - 118,162,778 (-)NCBIGRCm39mm39
GRCm39 Ensembl12117,841,717 - 118,162,778 (-)Ensembl
GRCm3812117,877,982 - 118,199,043 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12117,877,982 - 118,199,043 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712119,116,455 - 119,437,516 (-)NCBIGRCm37mm9NCBIm37
MGSCv3612112,081,403 - 112,243,674 (-)NCBImm8
MGSCv3612118,322,088 - 118,643,145 (-)NCBImm8
Cytogenetic Map12F2NCBI
cM Map1263.25NCBI
DNAH11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38721,543,039 - 21,901,839 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl721,543,039 - 21,901,839 (+)EnsemblGRCh38hg38GRCh38
GRCh37721,582,657 - 21,941,457 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36721,549,358 - 21,907,982 (+)NCBINCBI36hg18NCBI36
Build 34721,356,072 - 21,714,701NCBI
Celera721,568,334 - 21,927,147 (+)NCBI
Cytogenetic Map7p15.3NCBI
HuRef721,468,066 - 21,826,836 (+)NCBIHuRef
CHM1_1721,583,500 - 21,941,892 (+)NCBICHM1_1
T2T-CHM13v2.0721,679,184 - 22,038,139 (+)NCBI
CRA_TCAGchr7v2721,634,147 - 21,992,554 (+)NCBI
Dnah11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26138,839,175 - 139,155,554 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl6138,839,177 - 139,155,536 (-)Ensembl
Rnor_6.06145,784,893 - 146,099,212 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6145,785,275 - 146,099,053 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06154,698,519 - 155,011,384 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46145,190,931 - 145,516,859 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16145,376,140 - 145,389,155 (-)NCBI
Celera6136,492,481 - 136,807,626 (-)NCBICelera
Cytogenetic Map6q33NCBI
Dnah11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541024,044,886 - 24,352,626 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541024,045,333 - 24,352,626 (+)NCBIChiLan1.0ChiLan1.0
DNAH11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1721,540,932 - 21,897,485 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl721,540,932 - 21,897,485 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0722,228,345 - 22,585,681 (+)NCBIMhudiblu_PPA_v0panPan3
DNAH11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11435,468,080 - 35,784,621 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1435,468,154 - 35,784,806 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1435,010,233 - 35,326,619 (+)NCBI
ROS_Cfam_1.01435,391,909 - 35,710,339 (+)NCBI
ROS_Cfam_1.0 Ensembl1435,391,935 - 35,710,334 (+)Ensembl
UMICH_Zoey_3.11435,511,481 - 35,830,033 (+)NCBI
UNSW_CanFamBas_1.01435,211,138 - 35,527,954 (+)NCBI
UU_Cfam_GSD_1.01435,544,474 - 35,863,246 (+)NCBI
Dnah11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511879,695,026 - 80,008,043 (+)NCBI
SpeTri2.0NW_0049365467,370,180 - 7,681,835 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAH11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl990,423,077 - 90,767,487 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1990,420,044 - 90,768,327 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2999,840,344 - 100,218,083 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNAH11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12136,350,606 - 36,722,018 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2136,350,707 - 36,720,511 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604267,858,273 - 68,228,833 (+)NCBIVero_WHO_p1.0
Dnah11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247398,811,082 - 9,135,815 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046247398,810,127 - 9,136,044 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
UniSTS:225253  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3812117,926,993 - 117,927,098UniSTSGRCm38
MGSCv3712119,165,466 - 119,165,571UniSTSGRCm37
Cytogenetic Map12F2UniSTS
cM Map1260.0UniSTS
Dnahc11  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12F2UniSTS
cM Map1260.0UniSTS
D6Rck362  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38664,485,276 - 64,485,568UniSTSGRCm38
MGSCv37664,435,270 - 64,435,562UniSTSGRCm37
Celera666,619,923 - 66,620,215UniSTS
Cytogenetic Map6C1UniSTS
Cytogenetic Map12F2UniSTS
cM Map6 UniSTS
cM Map1263.25UniSTS
cM Map1260.0UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285961579119961683Mouse
4142007Chlq17_mcirculating hormone level QTL 17 (mouse)Not determined1288052874120092757Mouse
1300545Lifespan3_mlife span 3 (mouse)Not determined1288052874120092757Mouse
1301308Prdt4_mprion disease incubation time 4 (mouse)Not determined1288308354120092757Mouse
5491194Mobq3_mmultigenic obesity QTL 3 (mouse)Not determined1289664071120092757Mouse
1301836Heal5_mwound healing/regeneration 5 (mouse)Not determined1289939031120092757Mouse
1301922Bbaa6_mB.burgdorferi-associated arthritis 6 (mouse)Not determined1290308268120092757Mouse
10402491Dipa4_mdrug induced psychomotor activation 4 (mouse)Not determined1291222515120092757Mouse
12910532Nrq10a_mnoise-induced hearing loss resistant QTL 10a (mouse)1292750025120092757Mouse
12910533Nrq10_mnoise-induced hearing loss resistant QTL 10 (mouse)1292750025120092757Mouse
1357463Vtbt14_mvertebral trabecular bone trait 14 (mouse)Not determined1292936097120092757Mouse
1300973Abmm_mantibody mediated myocarditis (mouse)Not determined1293264461120092757Mouse
1302177Dps2_mdelta power in slow-wave sleep 2 (mouse)Not determined1294146064120092757Mouse
1302138Im6_mimmunoregulatory 6 (mouse)Not determined1296860337120092757Mouse
1301269Sluc12_msusceptibility to lung cancer 12 (mouse)Not determined1296860337120092757Mouse
10412075Nils1_mneointima lesion size 1 (mouse)Not determined12102024665120092757Mouse
1558957Igan4_mIgA nephropathy 4 (mouse)Not determined12109750025119024949Mouse
15092085Igly2_mIgG glycosylation 2, GP14 (mouse)12111737297119992757Mouse
15092087Igly4_mIgG glycosylation 4, GP17a (mouse)12114429496118423781Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1700
Count of miRNA genes:640
Interacting mature miRNAs:831
Transcripts:ENSMUST00000084806, ENSMUST00000175662, ENSMUST00000176239, ENSMUST00000176756
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC139993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC167979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF183144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000084806   ⟹   ENSMUSP00000081867
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12117,841,717 - 118,162,778 (-)Ensembl
GRCm38.p6 Ensembl12117,877,982 - 118,199,043 (-)Ensembl
RefSeq Acc Id: ENSMUST00000175662
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12117,866,949 - 117,879,473 (-)Ensembl
GRCm38.p6 Ensembl12117,903,214 - 117,915,738 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176239
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12117,866,965 - 117,879,699 (-)Ensembl
GRCm38.p6 Ensembl12117,903,230 - 117,915,964 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176756   ⟹   ENSMUSP00000135748
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12117,841,717 - 118,024,038 (-)Ensembl
GRCm38.p6 Ensembl12117,877,982 - 118,060,303 (-)Ensembl
RefSeq Acc Id: NM_010060   ⟹   NP_034190
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 118,162,778 (-)NCBI
GRCm3812117,877,982 - 118,199,043 (-)ENTREZGENE
MGSCv3712119,116,455 - 119,437,516 (-)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006515463   ⟹   XP_006515526
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 118,004,609 (-)NCBI
GRCm3812117,877,982 - 118,040,875 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006515464   ⟹   XP_006515527
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 117,984,008 (-)NCBI
GRCm3812117,877,982 - 118,020,273 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006515466   ⟹   XP_006515529
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 117,952,928 (-)NCBI
GRCm3812117,877,982 - 117,989,165 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006515467   ⟹   XP_006515530
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 117,930,351 (-)NCBI
GRCm3812117,877,982 - 117,966,616 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006515468   ⟹   XP_006515531
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 117,930,351 (-)NCBI
GRCm3812117,877,982 - 117,966,616 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314946   ⟹   XP_017170435
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 118,074,895 (-)NCBI
GRCm3812117,877,982 - 118,111,162 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314947   ⟹   XP_017170436
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,841,717 - 118,074,894 (-)NCBI
GRCm3812117,877,982 - 118,111,161 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314949   ⟹   XP_017170438
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912117,894,946 - 118,074,901 (-)NCBI
GRCm3812117,931,211 - 118,111,166 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034190   ⟸   NM_010060
- UniProtKB: E9Q7N9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006515526   ⟸   XM_006515463
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006515527   ⟸   XM_006515464
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006515529   ⟸   XM_006515466
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006515531   ⟸   XM_006515468
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006515530   ⟸   XM_006515467
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_017170435   ⟸   XM_017314946
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017170436   ⟸   XM_017314947
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017170438   ⟸   XM_017314949
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSMUSP00000081867   ⟸   ENSMUST00000084806
RefSeq Acc Id: ENSMUSP00000135748   ⟸   ENSMUST00000176756
Protein Domains
AAA

Promoters
RGD ID:8679478
Promoter ID:EPDNEW_M17769
Type:multiple initiation site
Name:Dnah11_1
Description:Mus musculus dynein, axonemal, heavy chain 11 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3812118,198,944 - 118,199,004EPDNEW
RGD ID:6822853
Promoter ID:MM_KWN:13100
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:NM_010060
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612119,437,104 - 119,437,604 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1100864 AgrOrtholog
Ensembl Genes ENSMUSG00000018581 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000081867 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135748 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000084806 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000176756 UniProtKB/TrEMBL
Gene3D-CATH 1.10.8.710 UniProtKB/TrEMBL
  1.10.8.720 UniProtKB/TrEMBL
  1.20.140.100 UniProtKB/TrEMBL
  3.10.490.20 UniProtKB/TrEMBL
  3.20.180.20 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  AAA_6 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  AAA_lid_11_sf UniProtKB/TrEMBL
  DHC_D5 UniProtKB/TrEMBL
  DHC_fam UniProtKB/TrEMBL
  DNAH3_AAA_lid_1 UniProtKB/TrEMBL
  Dynein_2_C UniProtKB/TrEMBL
  Dynein_2_N UniProtKB/TrEMBL
  Dynein_AAA1S UniProtKB/TrEMBL
  Dynein_AAA5_ext UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_C_barrel UniProtKB/TrEMBL
  Dynein_HC_stalk UniProtKB/TrEMBL
  Dynein_heavy_chain_D4_dom UniProtKB/TrEMBL
  Dynein_heavy_dom UniProtKB/TrEMBL
  Dynein_heavy_dom-1 UniProtKB/TrEMBL
  Dynein_heavy_dom-2 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report mmu:13411 UniProtKB/TrEMBL
MGD MGI:1100864 ENTREZGENE
NCBI Gene 13411 ENTREZGENE
PANTHER PTHR10676 UniProtKB/TrEMBL
Pfam AAA_6 UniProtKB/TrEMBL
  AAA_8 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_1 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  DHC_N1 UniProtKB/TrEMBL
  DHC_N2 UniProtKB/TrEMBL
  Dynein_AAA_lid UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_heavy UniProtKB/TrEMBL
  PF12777 UniProtKB/TrEMBL
PhenoGen Dnah11 PhenoGen
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt E9Q7N9 ENTREZGENE, UniProtKB/TrEMBL
  H3BLD7_MOUSE UniProtKB/TrEMBL
  Q9QZH1_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-06-04 Dnah11  dynein, axonemal, heavy chain 11  Dnahc11    Symbol and/or name change 5135510 APPROVED