Symbol: |
CFL1 |
Name: |
cofilin 1 |
RGD ID: |
12254992 |
Description: |
ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); phosphatidylinositol bisphosphate binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell motility (ortholog); cell projection organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); Bardet-Biedl syndrome (ortholog); brain compression (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cofilin-actin rod (ortholog) |
Type: |
protein-coding
|
RefSeq Status: |
MODEL |
Previously known as: |
cofilin-1 |
RGD Orthologs |
|
Alliance Orthologs |
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More Info |
more info ...
|
More Info |
Species |
Gene symbol and name |
Data Source |
Assertion derived from |
less info ...
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Orthologs 1 |
Homo sapiens (human): |
CFL1 (cofilin 1) |
HGNC |
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam |
Mus musculus (house mouse): |
Cfl1 (cofilin 1, non-muscle) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Rattus norvegicus (Norway rat): |
Cfl1 (cofilin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Chinchilla lanigera (long-tailed chinchilla): |
Cfl1 (cofilin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Pan paniscus (bonobo/pygmy chimpanzee): |
CFL1 (cofilin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Ictidomys tridecemlineatus (thirteen-lined ground squirrel): |
Cfl1 (cofilin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Sus scrofa (pig): |
CFL1 (cofilin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Chlorocebus sabaeus (green monkey): |
CFL1 (cofilin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Heterocephalus glaber (naked mole-rat): |
Cfl1 (cofilin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Other homologs 2 |
Homo sapiens (human): |
CFL2 (cofilin 2) |
HGNC |
OrthoDB |
|
Latest Assembly: |
CanFam3.1 - Dog CanFam3.1 Assembly |
Position: |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 18 | 51,404,649 - 51,408,240 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 51,401,659 - 51,408,212 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 50,013,157 - 50,016,753 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 52,442,507 - 52,446,103 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 52,439,523 - 52,446,096 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 51,542,563 - 51,546,159 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 51,116,937 - 51,120,532 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 51,906,246 - 51,909,842 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
|
CFL1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 51,404,649 - 51,408,240 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 51,401,659 - 51,408,212 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 50,013,157 - 50,016,753 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 52,442,507 - 52,446,103 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 52,439,523 - 52,446,096 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 51,542,563 - 51,546,159 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 51,116,937 - 51,120,532 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 51,906,246 - 51,909,842 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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CFL1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 65,854,673 - 65,858,180 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 65,823,022 - 65,862,026 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 65,622,144 - 65,625,651 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 65,378,858 - 65,382,380 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 65,378,862 - 65,382,380 | NCBI | | | | | Celera | 11 | 62,946,188 - 62,949,710 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q13.1 | NCBI | | | | | HuRef | 11 | 61,948,799 - 61,952,321 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 65,506,695 - 65,510,217 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 65,849,144 - 65,852,651 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cfl1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 19 | 5,540,483 - 5,544,059 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 5,540,483 - 5,545,229 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 5,490,455 - 5,494,031 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 5,490,455 - 5,495,201 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 5,490,455 - 5,494,031 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 5,490,525 - 5,495,201 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 5,362,154 - 5,365,730 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | A | NCBI | | | | | cM Map | 19 | 4.34 | NCBI | | | | |
|
Cfl1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 212,227,124 - 212,230,656 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 202,796,012 - 202,801,337 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 202,786,627 - 202,817,587 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 211,150,090 - 211,153,626 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 218,243,191 - 218,246,723 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 210,934,235 - 210,937,767 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 220,869,805 - 220,873,337 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 220,869,805 - 220,873,337 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 227,799,126 - 227,802,658 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 208,133,876 - 208,137,408 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 208,287,328 - 208,290,861 (+) | NCBI | | | | | Celera | 1 | 200,333,275 - 200,336,807 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q43 | NCBI | | | | |
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Cfl1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 19,479,181 - 19,482,571 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 19,479,181 - 19,482,571 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CFL1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 67,083,366 - 67,089,768 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 68,126,152 - 68,131,657 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 61,215,092 - 61,218,628 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 64,544,275 - 64,548,372 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 64,544,275 - 64,550,806 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Cfl1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 7,236,442 - 7,239,965 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936599 | 3,677,804 - 3,682,307 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936599 | 3,678,724 - 3,682,314 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CFL1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 6,469,254 - 6,475,035 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 6,471,558 - 6,475,019 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 5,575,587 - 5,579,048 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CFL1 (Chlorocebus sabaeus - green monkey) |
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Cfl1 (Heterocephalus glaber - naked mole-rat) |
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.
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alimentary part of gastrointestinal system
| | | | | | | | | | | | | |
6
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5
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5
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23
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22
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16
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6
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6
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6
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6
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33
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22
|
12
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14
|
10
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Ensembl Acc Id: |
ENSCAFT00000038591 ⟹ ENSCAFP00000034331 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 Ensembl | 18 | 51,404,725 - 51,408,010 (+) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00000082338 ⟹ ENSCAFP00000066287 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 Ensembl | 18 | 51,401,659 - 51,408,212 (+) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00845031982 ⟹ ENSCAFP00845025009 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 Ensembl | 18 | 52,439,523 - 52,446,096 (+) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00845032022 ⟹ ENSCAFP00845025042 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 Ensembl | 18 | 52,442,556 - 52,446,096 (+) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00845032060 ⟹ ENSCAFP00845025068 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 Ensembl | 18 | 52,442,842 - 52,446,089 (+) | Ensembl |
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RefSeq Acc Id: |
XM_038424961 ⟹ XP_038280889 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 | 18 | 52,442,507 - 52,446,103 (+) | NCBI |
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RefSeq Acc Id: |
XM_038501200 ⟹ XP_038357128 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UMICH_Zoey_3.1 | 18 | 51,542,563 - 51,546,159 (+) | NCBI |
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RefSeq Acc Id: |
XM_038563900 ⟹ XP_038419828 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UU_Cfam_GSD_1.0 | 18 | 51,906,246 - 51,909,842 (+) | NCBI |
|
RefSeq Acc Id: |
XM_038628028 ⟹ XP_038483956 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UNSW_CanFamBas_1.0 | 18 | 51,116,937 - 51,120,532 (+) | NCBI |
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RefSeq Acc Id: |
XM_533231 ⟹ XP_533231 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
CanFam3.1 | 18 | 51,404,649 - 51,408,240 (+) | NCBI | Dog10K_Boxer_Tasha | 18 | 50,013,157 - 50,016,753 (+) | NCBI |
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Sequence: |
GAGCGCCGGAAGCCCGCCCCGCCCCTCATTGTGCGGCTCCTACTAAACGGAAGGGGCCGGGAGAGGCCGCGTTCAGTCGGATCCCGGCGGCAGCTGCAGCGGCTCTCATCTCTTCTGACCCTTTTTGC TATCTCCCTTTCGCTTCCGGAAACATGGCCTCTGGCGTGGCGGTTTCTGATGGCGTCATCAAAGTGTTCAATGACATGAAGGTGCGTAAGTCTTCAACACCCGAGGAAGTGAAGAAGCGCAAGAAGGC AGTTCTTTTCTGCCTGAGCGAGGACAAGAAGAACATCATCCTCGAGGAGGGCAAGGAGATCCTGGTAGGTGATGTGGGCCAGACTGTAGATGACCCCTACGCCACCTTTGTCAAGATGCTACCAGACA AGGACTGCCGCTATGCCCTCTATGACGCAACCTATGAGACCAAGGAGAGCAAGAAGGAGGACCTGGTGTTTATCTTCTGGGCACCTGAGTCTGCACCCCTTAAGAGCAAAATGATTTATGCCAGCTCC AAGGATGCCATCAAGAAAAAGCTGACTGGGATCAAGCATGAGTTACAAGCAAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTGGCAGAGAAACTGGGGGGCAGTGCCGTCATCTCTCTGGAGGG CAAGCCTTTGTGAGCCCCCTCCAGCCCCCTGCCTGGAGCATCTGGCAGCCCCAGACCTGCCCATGGGGGTTGCAGGCTGCCCCCTTCCTGCCAGACCGGAGGGGCTGGGGGGATCCCAGCAGGGGGAG GGCAATCCCTTCACCCCAGTTGCCAAACAGCCCCCTCACCCCCTGGACCTTCCTCCTCCCTCTATCCCTGACGGTTCTGGCTTTCCCAAACCGCTTTTGATCTTCTGATTCCTCTTGGGTTGAAGCAG ACCAAGTTCCCCCCAGGCACCCCAGTTTGGGGGGGGCCTGTATTTTTTTTAACGACACCCCAGTTCCTCACCTGTTCCTCCCTTTTCCCATGCTGCCAACTTCTAACCGCAATAGTGACTCTGTGCTT GTCTGTTTAGTTCTGTGTATAAATGGAATGTTGTGGAGATGACCCTTCCTTGCGCCACCTGGTTCCCCTCCCCTTTTCCCCTGGTCTTGGCACTCATGGAAACAGGACCAGTAAGGGACCTTCAATTA AAAAAAAACCAACAACACACACAACAATAAAAAGGCTCACTAATGGGA
hide sequence
|
RefSeq Acc Id: |
XP_533231 ⟸ XM_533231 |
- UniProtKB: |
A0A8C0NGL0 (UniProtKB/TrEMBL), A0A8I3P3F3 (UniProtKB/TrEMBL), A0A8C0KR90 (UniProtKB/TrEMBL) |
- Sequence: |
MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKL TGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL
hide sequence
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Ensembl Acc Id: |
ENSCAFP00000034331 ⟸ ENSCAFT00000038591 |
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Ensembl Acc Id: |
ENSCAFP00000066287 ⟸ ENSCAFT00000082338 |
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RefSeq Acc Id: |
XP_038357128 ⟸ XM_038501200 |
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RefSeq Acc Id: |
XP_038483956 ⟸ XM_038628028 |
| | |
Ensembl Acc Id: |
ENSCAFP00845025009 ⟸ ENSCAFT00845031982 |
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Ensembl Acc Id: |
ENSCAFP00845025042 ⟸ ENSCAFT00845032022 |
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Ensembl Acc Id: |
ENSCAFP00845025068 ⟸ ENSCAFT00845032060 |
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RGD ID: | 13686597 |
Promoter ID: | EPDNEW_C4666 |
Type: | initiation region |
Name: | CFL1_1 |
Description: | cofilin 1 |
SO ACC ID: | SO:0000170 |
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) |
Experiment Methods: | Single-end sequencing. |
Position: | Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 | 18 | 51,406,766 - 51,406,826 | EPDNEW |
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