CFL1 (cofilin 1) - Rat Genome Database

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Gene: CFL1 (cofilin 1) Canis lupus familiaris
Analyze
Symbol: CFL1
Name: cofilin 1
RGD ID: 12254992
Description: ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); phosphatidylinositol bisphosphate binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell motility (ortholog); cell projection organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); Bardet-Biedl syndrome (ortholog); brain compression (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cofilin-actin rod (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cofilin-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,404,649 - 51,408,240 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,401,659 - 51,408,212 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,013,157 - 50,016,753 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01852,442,507 - 52,446,103 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,439,523 - 52,446,096 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,542,563 - 51,546,159 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,116,937 - 51,120,532 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01851,906,246 - 51,909,842 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CFL1Dogbrain compression treatmentISORGD:7329709068941 RGDPMID:25708984|REF_RGD_ID:12738361
CFL1DogCocaine-Related Disorders  ISORGD:692859068941protein:altered expression:striatum (rat)RGDPMID:27018876|REF_RGD_ID:11568696
CFL1DogDiabetic Cardiomyopathies treatmentISORGD:692859068941associated with Diabetes Mellitus, ExperimentalRGDPMID:27576917|REF_RGD_ID:11568692
CFL1DogDiabetic Nephropathies  ISORGD:692859068941associated with Diabetes Mellitus, Experimental;protein:increased phosphorylation:renal glomerulus (rat)RGDPMID:24726496|REF_RGD_ID:11570419
CFL1Doggallbladder carcinoma severityISORGD:7329709068941Squamous Cell/Adenosquamous Carcinoma and Adenocarcinoma;protein:increased expression:gall bladder (human)RGDPMID:23320827|REF_RGD_ID:11571623
CFL1DogHyperalgesia  ISORGD:692859068941protein:increased phosphorylation:dorsal root ganglion (rat)RGDPMID:24962708|REF_RGD_ID:11570412
CFL1DogHypertensive Nephropathy  ISORGD:692859068941protein:increased phosphorylation:kidney (rat)RGDPMID:26450610|REF_RGD_ID:11520804
CFL1Dogimpotence treatmentISORGD:692859068941 RGDPMID:25444982|REF_RGD_ID:11570410
CFL1Dogimpotence  ISORGD:692859068941protein:increased phosphorylation:corpus cavernosum penis (rat)RGDPMID:25923835|REF_RGD_ID:11568706
CFL1Dogmuscular atrophy  ISORGD:692859068941protein:decreased phosphorylation:gastrocnemius (rat)RGDPMID:24711688|REF_RGD_ID:11570530
CFL1Dogmyocardial infarction treatmentISORGD:692859068941 RGDPMID:24292258|REF_RGD_ID:11570534
CFL1Dognephrotic syndrome treatmentISORGD:692859068941 RGDPMID:24737737|REF_RGD_ID:11570418
CFL1DogNeuralgia treatmentISORGD:692859068941associated with Sciatic NeuropathyRGDPMID:27216618|REF_RGD_ID:11568694
CFL1DogOptic Nerve Injuries treatmentISORGD:692859068941 RGDPMID:27443501|REF_RGD_ID:11568693
CFL1Dogstatus epilepticus treatmentISORGD:692859068941 RGDPMID:27642592|REF_RGD_ID:11568691
CFL1Dogureteral obstruction  ISORGD:692859068941protein:increased expression:inner medulla of kidney (rat)RGDPMID:24761003|REF_RGD_ID:11570413
CFL1Dogvitamin B12 deficiency  ISORGD:692859068941protein:increased expression:kidney (rat)RGDPMID:25982389|REF_RGD_ID:11352764
CFL1DogWest syndrome  ISORGD:692859068941protein:decreased expression:brain (rat)RGDPMID:24994451|REF_RGD_ID:11570411
1 to 18 of 18 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CFL1DogAicardi-Goutieres Syndrome 3  ISORGD:7329708554872ClinVar Annotator: match by term: Aicardi-Goutieres syndrome 3ClinVarPMID:28492532|PMID:28600438
CFL1DogBardet-Biedl syndrome  ISORGD:7329708554872ClinVar Annotator: match by term: Bardet-Biedl syndromeClinVarPMID:12118255|PMID:16786513|PMID:21520335|PMID:27032803|PMID:28492532|PMID:8316268
CFL1Dogglycogen storage disease V  ISORGD:7329708554872ClinVar Annotator: match by term: Glycogen storage disease, type VClinVarPMID:12118255|PMID:16786513|PMID:21520335|PMID:27032803|PMID:28492532|PMID:8316268
CFL1Dogimmunodeficiency 90  ISORGD:7329708554872ClinVar Annotator: match by term: Infections, recurrent, with encephalopathy, hepatic dysfunction, and cardiovascular malformationsClinVarPMID:28492532
CFL1Dogintellectual disability  ISORGD:7329708554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CFL1DogBreast Neoplasms  ISORGD:7329709068941CTD Direct Evidence: marker/mechanismCTDPMID:20562527
CFL1Dogesophagus squamous cell carcinoma  ISORGD:7329709068941CTD Direct Evidence: marker/mechanismCTDPMID:21517111
CFL1DogNeoplasm Invasiveness  ISORGD:7329709068941CTD Direct Evidence: marker/mechanismCTDPMID:15048980
CFL1DogNeoplasm Metastasis  ISORGD:7329709068941CTD Direct Evidence: marker/mechanismCTDPMID:20562527
CFL1Dogpre-malignant neoplasm  ISORGD:7329709068941CTD Direct Evidence: marker/mechanismCTDPMID:21472284
CFL1Dogspina bifida  ISORGD:7329709068941CTD Direct Evidence: marker/mechanismCTDPMID:17352815


Biological Process
1 to 20 of 56 rows

  
Object Symbol
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Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CFL1Dogactin filament depolymerization involved_inIEAUniProtKB:P23528|ensembl:ENSP00000309629150520179 EnsemblGO_REF:0000107
CFL1Dogactin filament depolymerization involved_inIEAInterPro:IPR017904150520179 InterProGO_REF:0000002
CFL1Dogactin filament fragmentation involved_inIBAMGI:101757|MGI:101763|MGI:1929270|PANTHER:PTN000227261150520179 GO_CentralGO_REF:0000033
CFL1Dogactin filament organization involved_inISORGD:7354179068941 PMID:25208553UniProtPMID:25208553
CFL1Dogactin filament organization acts_upstream_of_or_withinISOMGI:35743999068941 PMID:15649475MGIPMID:15649475
CFL1Dogactin filament severing involved_inIBAPANTHER:PTN000227259|PomBase:SPAC20G4.06c|SGD:S000003973|UniProtKB:C4LVG4|WB:WBGene00006794|dictyBase:DDB_G0277833150520179 GO_CentralGO_REF:0000033
CFL1Dogcell motility acts_upstream_of_or_withinISORGD:7354179068941 PMID:15548599MGIPMID:15548599
CFL1Dogcell projection organization acts_upstream_of_or_withinISORGD:692859068941PMID:16286931MGIPMID:16286931|REF_RGD_ID:8554187
CFL1Dogcellular response to epidermal growth factor stimulus  ISORGD:692859068941 RGDPMID:23704350|PMID:26324884|REF_RGD_ID:11568705|REF_RGD_ID:11570555
CFL1Dogcellular response to ether  ISORGD:692859068941polybrominated diphenyl ethersRGDPMID:24239914|REF_RGD_ID:11570536
CFL1Dogcellular response to hydrogen peroxide  ISORGD:692859068941 RGDPMID:23765104|REF_RGD_ID:11570554
CFL1Dogcellular response to insulin-like growth factor stimulus  ISORGD:692859068941 RGDPMID:24195677|REF_RGD_ID:10053669
CFL1Dogcellular response to interleukin-1  ISORGD:692859068941 RGDPMID:24760020|REF_RGD_ID:11570414
CFL1Dogcellular response to interleukin-6  ISORGD:692859068941 RGDPMID:24760020|REF_RGD_ID:11570414
CFL1Dogcellular response to tumor necrosis factor  ISORGD:692859068941 RGDPMID:24760020|REF_RGD_ID:11570414
CFL1Dogcytoskeleton organization involved_inIEAUniProtKB:P23528|ensembl:ENSP00000309629150520179 EnsemblGO_REF:0000107
CFL1Dogestablishment of cell polarity acts_upstream_of_or_withinISOMGI:35743999068941 PMID:15649475MGIPMID:15649475
CFL1Dogestablishment of spindle localization involved_inISORGD:7354179068941 PMID:25208553UniProtPMID:25208553
CFL1Doghippocampus development  ISORGD:692859068941 RGDPMID:27073215|REF_RGD_ID:11568695
CFL1Dogmitotic cytokinesis involved_inIBAMGI:101757|PANTHER:PTN001375639150520179 GO_CentralGO_REF:0000033
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Cellular Component
1 to 20 of 21 rows

  
Object Symbol
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Reference
Notes
Source
Original Reference(s)
CFL1Dogactin cytoskeleton located_inIEAInterPro:IPR017904150520179 InterProGO_REF:0000002
CFL1Dogactin cytoskeleton is_active_inIBAMGI:101757|MGI:1929270|PANTHER:PTN000227258|PomBase:SPAC20G4.06c|RGD:69285|SGD:S000003973|TAIR:locus:2131879|TAIR:locus:2156727|UniProtKB:Q8I467|UniProtKB:Q8ID92|WB:WBGene00006794|dictyBase:DDB_G0272568|dictyBase:DDB_G0277833150520179 GO_CentralGO_REF:0000033
CFL1Dogcell leading edge  ISORGD:692859068941 RGDPMID:15252126|REF_RGD_ID:2306210
CFL1Dogcell-cell junction located_inISORGD:7354179068941 PMID:23793062MGIPMID:23793062
CFL1Dogcofilin-actin rod  ISORGD:692859068941 RGDPMID:24760020|REF_RGD_ID:11570414
CFL1Dogcortical actin cytoskeleton located_inISORGD:7354179068941 PMID:15004221, PMID:15548599MGIPMID:15004221|PMID:15548599
CFL1Dogcytoplasm located_inIEAUniProtKB:P23528|ensembl:ENSP00000309629150520179 EnsemblGO_REF:0000107
CFL1Dogcytoplasm is_active_inIBAMGI:101757|MGI:1929270|PANTHER:PTN000227258|PomBase:SPAC20G4.06c|RGD:69285|SGD:S000003973|UniProtKB:A0A8J1MVR2|UniProtKB:C4LVG4|UniProtKB:P23528|UniProtKB:Q580V7|UniProtKB:Q8I467|UniProtKB:Q9Y281|WB:WBGene00006794|dictyBase:DDB_G0277833150520179 GO_CentralGO_REF:0000033
CFL1Dogdendritic spine  ISORGD:692859068941 RGDPMID:24760020|REF_RGD_ID:11570414
CFL1Dogfilopodium  ISORGD:692859068941 RGDPMID:24515839|REF_RGD_ID:11570532
CFL1Dogfocal adhesion located_inIEAUniProtKB:P23528|ensembl:ENSP00000309629150520179 EnsemblGO_REF:0000107
CFL1Dogglutamatergic synapse is_active_inISORGD:692859068941PMID:16025109SynGOPMID:16025109|REF_RGD_ID:13702428
CFL1Dogglutamatergic synapse is_active_inISORGD:7354179068941 PMID:16388910SynGOPMID:16388910
CFL1Doggrowth cone  ISORGD:692859068941 RGDPMID:24515839|REF_RGD_ID:11570532
CFL1Doglamellipodium  ISORGD:692859068941 RGDPMID:15252126|REF_RGD_ID:2306210
CFL1Doglamellipodium is_active_inIBAMGI:101757|PANTHER:PTN000227296|RGD:69285150520179 GO_CentralGO_REF:0000033
CFL1Doglamellipodium located_inISORGD:7354179068941 PMID:25107909UniProtPMID:25107909
CFL1Dogmitochondrial membrane  ISORGD:692859068941 RGDPMID:27642592|REF_RGD_ID:11568691
CFL1Dogneuronal cell body  ISORGD:692859068941 RGDPMID:24515839|REF_RGD_ID:11570532
CFL1Dogpostsynaptic density, intracellular component is_active_inISORGD:7354179068941 PMID:16388910SynGOPMID:16388910
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Molecular Function
1 to 20 of 30 rows

  
Object Symbol
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Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
CFL1Dogactin binding  ISORGD:692859068941 RGDPMID:12566455|REF_RGD_ID:724709
CFL1Dogactin binding enablesIEAUniProtKB-KW:KW-0009150520179 UniProtGO_REF:0000043
CFL1Dogactin binding enablesIEAInterPro:IPR002108150520179 InterProGO_REF:0000002
CFL1Dogactin filament binding  ISORGD:692859068941 RGDPMID:24740405|REF_RGD_ID:11570417
CFL1Dogactin filament binding enablesIBAMGI:101757|MGI:101763|MGI:1929270|PANTHER:PTN000227258|PomBase:SPAC20G4.06c|RGD:69285|SGD:S000003973|TAIR:locus:2059861|UniProtKB:A0A8J1MVR2|UniProtKB:P10668|UniProtKB:P23528|UniProtKB:P60981|WB:WBGene00006794150520179 GO_CentralGO_REF:0000033
CFL1Dogactin filament binding enablesIEAUniProtKB:P23528|ensembl:ENSP00000309629150520179 EnsemblGO_REF:0000107
CFL1Dogphosphatidylinositol bisphosphate binding  ISOCHEBI:183489068941 RGDPMID:19029335|REF_RGD_ID:11041716
CFL1Dogprotein binding enablesISOUniProtKB:P005339068941 PMID:20029029, PMID:24658140, PMID:31980649IntActPMID:20029029|PMID:24658140|PMID:31980649
CFL1Dogprotein binding enablesISOUniProtKB:Q9R1M5|UniProtKB:Q9WVB39068941 PMID:25208553UniProtPMID:25208553
CFL1Dogprotein binding enablesISOUniProtKB:P53667|UniProtKB:P570589068941 PMID:20133759IntActPMID:20133759
CFL1Dogprotein binding enablesISOUniProtKB:O14939|UniProtKB:P53667|UniProtKB:Q133939068941 PMID:17853892IntActPMID:17853892
CFL1Dogprotein binding enablesISOUniProtKB:P54253|UniProtKB:Q96CV99068941 PMID:32814053IntActPMID:32814053
CFL1Dogprotein binding enablesISOUniProtKB:P542539068941 PMID:16713569IntActPMID:16713569
CFL1Dogprotein binding enablesISOUniProtKB:P536679068941 PMID:19424295IntActPMID:19424295
CFL1Dogprotein binding enablesISOUniProtKB:P60709|UniProtKB:P63261|UniProtKB:Q1KLZ0|UniProtKB:Q549N09068941 PMID:25416956IntActPMID:25416956
CFL1Dogprotein binding enablesISOUniProtKB:P607099068941 PMID:29892012, PMID:31515488IntActPMID:29892012|PMID:31515488
CFL1Dogprotein binding enablesISOUniProtKB:P27958-PRO_00000375669068941 PMID:15846844AgBasePMID:15846844
CFL1Dogprotein binding enablesISOUniProtKB:P0DOE79068941 PMID:25556234AgBasePMID:25556234
CFL1Dogprotein binding enablesISOUniProtKB:P631049068941 PMID:12361576, PMID:15161933IntActPMID:12361576|PMID:15161933
CFL1Dogprotein binding enablesISOUniProtKB:P60709|UniProtKB:P632619068941 PMID:16189514, PMID:32296183, PMID:35271311IntActPMID:16189514|PMID:32296183|PMID:35271311
1 to 20 of 30 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CFL1Doginsulin responsive facilitative sugar transporter mediated glucose transport pathway   ISORGD:692859068941 RGDPMID:20739464|REF_RGD_ID:10054052
CFL1DogRab family mediated signaling pathway  ISORGD:692859068941 RGDPMID:20739464|REF_RGD_ID:10054052
PMID:18070928   PMID:22301074   PMID:30032202  



CFL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,404,649 - 51,408,240 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,401,659 - 51,408,212 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,013,157 - 50,016,753 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01852,442,507 - 52,446,103 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,439,523 - 52,446,096 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,542,563 - 51,546,159 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,116,937 - 51,120,532 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01851,906,246 - 51,909,842 (+)NCBIUU_Cfam_GSD_1.0
CFL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,854,673 - 65,858,180 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,823,022 - 65,862,026 (-)EnsemblGRCh38hg38GRCh38
GRCh371165,622,144 - 65,625,651 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361165,378,858 - 65,382,380 (-)NCBINCBI36Build 36hg18NCBI36
Build 341165,378,862 - 65,382,380NCBI
Celera1162,946,188 - 62,949,710 (-)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1161,948,799 - 61,952,321 (-)NCBIHuRef
CHM1_11165,506,695 - 65,510,217 (-)NCBICHM1_1
T2T-CHM13v2.01165,849,144 - 65,852,651 (-)NCBIT2T-CHM13v2.0
Cfl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39195,540,483 - 5,544,059 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl195,540,483 - 5,545,229 (+)EnsemblGRCm39 Ensembl
GRCm38195,490,455 - 5,494,031 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl195,490,455 - 5,495,201 (+)EnsemblGRCm38mm10GRCm38
MGSCv37195,490,455 - 5,494,031 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,490,525 - 5,495,201 (+)NCBIMGSCv36mm8
Celera195,362,154 - 5,365,730 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
Cfl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81212,227,124 - 212,230,656 (+)NCBIGRCr8
mRatBN7.21202,796,012 - 202,801,337 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1202,786,627 - 202,817,587 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,150,090 - 211,153,626 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01218,243,191 - 218,246,723 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,934,235 - 210,937,767 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01220,869,805 - 220,873,337 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1220,869,805 - 220,873,337 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01227,799,126 - 227,802,658 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,133,876 - 208,137,408 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11208,287,328 - 208,290,861 (+)NCBI
Celera1200,333,275 - 200,336,807 (+)NCBICelera
Cytogenetic Map1q43NCBI
Cfl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542219,479,181 - 19,482,571 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542219,479,181 - 19,482,571 (+)NCBIChiLan1.0ChiLan1.0
CFL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2967,083,366 - 67,089,768 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11168,126,152 - 68,131,657 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01161,215,092 - 61,218,628 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11164,544,275 - 64,548,372 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1164,544,275 - 64,550,806 (-)Ensemblpanpan1.1panPan2
Cfl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049477,236,442 - 7,239,965 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365993,677,804 - 3,682,307 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365993,678,724 - 3,682,314 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CFL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl26,469,254 - 6,475,035 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.126,471,558 - 6,475,019 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.225,575,587 - 5,579,048 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CFL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.118,408,560 - 8,410,564 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666038105,687,711 - 105,692,145 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cfl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476720,574,966 - 20,579,796 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476720,574,884 - 20,578,413 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in CFL1
62 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10



Ensembl Acc Id: ENSCAFT00000038591   ⟹   ENSCAFP00000034331
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1851,404,725 - 51,408,010 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000082338   ⟹   ENSCAFP00000066287
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1851,401,659 - 51,408,212 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845031982   ⟹   ENSCAFP00845025009
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1852,439,523 - 52,446,096 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845032022   ⟹   ENSCAFP00845025042
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1852,442,556 - 52,446,096 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845032060   ⟹   ENSCAFP00845025068
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1852,442,842 - 52,446,089 (+)Ensembl
RefSeq Acc Id: XM_038424961   ⟹   XP_038280889
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,442,507 - 52,446,103 (+)NCBI
RefSeq Acc Id: XM_038501200   ⟹   XP_038357128
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,542,563 - 51,546,159 (+)NCBI
RefSeq Acc Id: XM_038563900   ⟹   XP_038419828
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01851,906,246 - 51,909,842 (+)NCBI
RefSeq Acc Id: XM_038628028   ⟹   XP_038483956
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,116,937 - 51,120,532 (+)NCBI
RefSeq Acc Id: XM_533231   ⟹   XP_533231
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11851,404,649 - 51,408,240 (+)NCBI
Dog10K_Boxer_Tasha1850,013,157 - 50,016,753 (+)NCBI
Sequence:
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: XP_533231   ⟸   XM_533231
- UniProtKB: A0A8C0NGL0 (UniProtKB/TrEMBL),   A0A8I3P3F3 (UniProtKB/TrEMBL),   A0A8C0KR90 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000034331   ⟸   ENSCAFT00000038591
Ensembl Acc Id: ENSCAFP00000066287   ⟸   ENSCAFT00000082338
RefSeq Acc Id: XP_038357128   ⟸   XM_038501200
RefSeq Acc Id: XP_038483956   ⟸   XM_038628028
ADF-H

RGD ID:13686597
Promoter ID:EPDNEW_C4666
Type:initiation region
Name:CFL1_1
Description:cofilin 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11851,406,766 - 51,406,826EPDNEW


1 to 35 of 35 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000024955 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030014369 UniProtKB/TrEMBL
  ENSCAFG00040015884 UniProtKB/TrEMBL
  ENSCAFG00845018065 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000038591.4 UniProtKB/TrEMBL
  ENSCAFT00000082338.2 UniProtKB/TrEMBL
  ENSCAFT00000102070.1 UniProtKB/TrEMBL
  ENSCAFT00030026606.1 UniProtKB/TrEMBL
  ENSCAFT00030026660.1 UniProtKB/TrEMBL
  ENSCAFT00040029281.1 UniProtKB/TrEMBL
  ENSCAFT00040029331.1 UniProtKB/TrEMBL
  ENSCAFT00845031982.1 UniProtKB/TrEMBL
  ENSCAFT00845032022 ENTREZGENE
  ENSCAFT00845032022.1 UniProtKB/TrEMBL
  ENSCAFT00845032060.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.20.10 UniProtKB/TrEMBL
InterPro ADF-H UniProtKB/TrEMBL
  ADF-H/Gelsolin-like_dom_sf UniProtKB/TrEMBL
  ADF/Cofilin UniProtKB/TrEMBL
KEGG Report cfa:476022 UniProtKB/TrEMBL
NCBI Gene CFL1 ENTREZGENE
PANTHER PTHR11913 UniProtKB/TrEMBL
Pfam Cofilin_ADF UniProtKB/TrEMBL
PRINTS COFILIN UniProtKB/TrEMBL
PROSITE ADF_H UniProtKB/TrEMBL
SMART ADF UniProtKB/TrEMBL
Superfamily-SCOP Actin depolymerizing proteins UniProtKB/TrEMBL
UniProt A0A8C0KR90 ENTREZGENE
  A0A8C0NGL0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RK39_CANLF UniProtKB/TrEMBL
  A0A8I3P3F3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PA72_CANLF UniProtKB/TrEMBL
  A0A8I3S096_CANLF UniProtKB/TrEMBL
  A0A8P0TNM7_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:56088 ENTREZGENE
1 to 35 of 35 rows