ITSN1 (intersectin 1) - Rat Genome Database

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Gene: ITSN1 (intersectin 1) Canis lupus familiaris
Analyze
Symbol: ITSN1
Name: intersectin 1
RGD ID: 12224546
Description: ENCODES a protein that exhibits kinase activator activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); endocytosis (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); FOUND IN apical dendrite (ortholog); calyx of Held (ortholog); clathrin-coated pit (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: intersectin-1; LOC100856635
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13129,144,754 - 29,360,134 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3128,243,620 - 28,459,926 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03128,451,006 - 28,667,391 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,661,479 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13128,317,804 - 28,534,014 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03128,331,715 - 28,548,460 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03128,831,446 - 29,047,794 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ITSN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13129,144,754 - 29,360,134 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3128,243,620 - 28,459,926 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03128,451,006 - 28,667,391 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,661,479 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13128,317,804 - 28,534,014 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03128,331,715 - 28,548,460 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03128,831,446 - 29,047,794 (+)NCBIUU_Cfam_GSD_1.0
ITSN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382133,642,501 - 33,899,861 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2133,642,400 - 33,899,861 (+)EnsemblGRCh38hg38GRCh38
GRCh372135,014,807 - 35,272,165 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362133,936,654 - 34,183,479 (+)NCBINCBI36Build 36hg18NCBI36
Build 342133,936,653 - 34,183,479NCBI
Celera2120,214,405 - 20,461,193 (+)NCBICelera
Cytogenetic Map21q22.11NCBI
HuRef2120,493,109 - 20,739,668 (+)NCBIHuRef
CHM1_12134,577,248 - 34,824,084 (+)NCBICHM1_1
T2T-CHM13v2.02132,024,315 - 32,281,564 (+)NCBIT2T-CHM13v2.0
Itsn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391691,526,198 - 91,717,479 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1691,526,169 - 91,717,485 (+)EnsemblGRCm39 Ensembl
GRCm381691,729,310 - 91,920,591 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1691,729,281 - 91,920,597 (+)EnsemblGRCm38mm10GRCm38
MGSCv371691,729,616 - 91,920,824 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361691,671,052 - 91,800,868 (+)NCBIMGSCv36mm8
Celera1692,808,009 - 93,004,876 (+)NCBICelera
Cytogenetic Map16C4NCBI
cM Map1653.28NCBI
Itsn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81144,464,515 - 44,646,598 (+)NCBIGRCr8
mRatBN7.21130,978,590 - 31,160,645 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1130,978,590 - 31,160,645 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1139,672,533 - 39,854,583 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01132,343,963 - 32,526,016 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01131,506,203 - 31,688,572 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01131,943,119 - 32,069,249 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,893,489 - 32,069,249 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01135,547,331 - 35,672,959 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,721,528 - 31,901,963 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11131,815,217 - 31,903,071 (+)NCBI
Celera1130,687,099 - 30,812,424 (+)NCBICelera
Cytogenetic Map11q11NCBI
Itsn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540733,113,319 - 33,275,675 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540733,056,004 - 33,275,681 (+)NCBIChiLan1.0ChiLan1.0
ITSN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22229,759,728 - 30,017,340 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12124,617,929 - 24,875,764 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02120,009,385 - 20,266,835 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12133,381,640 - 33,625,603 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2133,457,081 - 33,625,248 (+)Ensemblpanpan1.1panPan2
Itsn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497128,789,742 - 28,977,174 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365008,468,940 - 8,612,942 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365008,490,514 - 8,678,127 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ITSN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13197,249,061 - 197,481,245 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113197,301,515 - 197,492,537 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213207,205,545 - 207,267,672 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ITSN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1258,298,529 - 58,543,297 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl258,301,399 - 58,543,281 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666071805,376 - 1,047,516 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Itsn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474521,906,187 - 22,050,822 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474521,847,593 - 22,055,141 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ITSN1
182 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
12 10 10 46 44 32 12 12 12 12 66 44 24 28 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005638880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014109747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014109748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014109749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005305391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005316738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005348479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005382307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005416030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00845043822   ⟹   ENSCAFP00845034340
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,661,479 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845044081   ⟹   ENSCAFP00845034539
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,661,479 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845044401   ⟹   ENSCAFP00845034794
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,615,130 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845044613   ⟹   ENSCAFP00845034953
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,615,130 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845044802   ⟹   ENSCAFP00845035109
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,599,471 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845044908   ⟹   ENSCAFP00845035194
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3128,451,116 - 28,597,776 (+)Ensembl
RefSeq Acc Id: XM_014109747   ⟹   XP_013965222
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13129,144,758 - 29,360,134 (+)NCBI
Dog10K_Boxer_Tasha3128,243,622 - 28,459,926 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022413236   ⟹   XP_022268944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13129,144,755 - 29,360,134 (+)NCBI
Dog10K_Boxer_Tasha3128,243,620 - 28,459,926 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038443408   ⟹   XP_038299336
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03128,451,007 - 28,667,391 (+)NCBI
RefSeq Acc Id: XM_038443409   ⟹   XP_038299337
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03128,521,489 - 28,667,391 (+)NCBI
RefSeq Acc Id: XM_038443410   ⟹   XP_038299338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03128,451,006 - 28,667,391 (+)NCBI
RefSeq Acc Id: XM_038443411   ⟹   XP_038299339
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03128,451,023 - 28,616,201 (+)NCBI
RefSeq Acc Id: XM_038461852   ⟹   XP_038317780
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3128,243,638 - 28,408,720 (+)NCBI
RefSeq Acc Id: XM_038517830   ⟹   XP_038373758
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13128,317,806 - 28,534,014 (+)NCBI
RefSeq Acc Id: XM_038517831   ⟹   XP_038373759
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13128,317,804 - 28,534,014 (+)NCBI
RefSeq Acc Id: XM_038517832   ⟹   XP_038373760
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13128,317,823 - 28,482,837 (+)NCBI
RefSeq Acc Id: XM_038581401   ⟹   XP_038437329
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03128,831,448 - 29,047,794 (+)NCBI
RefSeq Acc Id: XM_038581402   ⟹   XP_038437330
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03128,831,446 - 29,047,794 (+)NCBI
RefSeq Acc Id: XM_038581403   ⟹   XP_038437331
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03128,831,465 - 28,996,578 (+)NCBI
RefSeq Acc Id: XM_038645781   ⟹   XP_038501709
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03128,331,717 - 28,548,460 (+)NCBI
RefSeq Acc Id: XM_038645782   ⟹   XP_038501710
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03128,331,715 - 28,548,460 (+)NCBI
RefSeq Acc Id: XM_038645783   ⟹   XP_038501711
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03128,331,733 - 28,497,281 (+)NCBI
RefSeq Acc Id: XR_005305391
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03128,451,017 - 28,651,131 (+)NCBI
RefSeq Acc Id: XR_005316738
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3128,243,634 - 28,443,689 (+)NCBI
RefSeq Acc Id: XR_005348479
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13128,317,818 - 28,517,761 (+)NCBI
RefSeq Acc Id: XR_005382307
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03128,831,460 - 29,031,549 (+)NCBI
RefSeq Acc Id: XR_005416030
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03128,331,729 - 28,532,240 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013965222 (Get FASTA)   NCBI Sequence Viewer  
  XP_022268944 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299336 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299338 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299339 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317780 (Get FASTA)   NCBI Sequence Viewer  
  XP_038373758 (Get FASTA)   NCBI Sequence Viewer  
  XP_038373759 (Get FASTA)   NCBI Sequence Viewer  
  XP_038373760 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437329 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437330 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437331 (Get FASTA)   NCBI Sequence Viewer  
  XP_038501709 (Get FASTA)   NCBI Sequence Viewer  
  XP_038501710 (Get FASTA)   NCBI Sequence Viewer  
  XP_038501711 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000014000.3
  ENSCAFP00000014017.3
  ENSCAFP00000049725.2
  ENSCAFP00000056372.1
  ENSCAFP00000057565.1
  ENSCAFP00000061908.1
  ENSCAFP00030011648.1
  ENSCAFP00030011678.1
  ENSCAFP00030011773.1
  ENSCAFP00030011847.1
  ENSCAFP00030011875.1
  ENSCAFP00030011945.1
  ENSCAFP00030012060.1
  ENSCAFP00040029920.1
  ENSCAFP00040029985.1
  ENSCAFP00040030045.1
  ENSCAFP00040030085.1
  ENSCAFP00040030135.1
  ENSCAFP00040030176.1
  ENSCAFP00845034340.1
  ENSCAFP00845034539
  ENSCAFP00845034539.1
  ENSCAFP00845034794
  ENSCAFP00845034794.1
  ENSCAFP00845034953.1
  ENSCAFP00845035109.1
  ENSCAFP00845035194.1
RefSeq Acc Id: XP_013965222   ⟸   XM_014109747
- Peptide Label: isoform X1
- UniProtKB: L7MTN8 (UniProtKB/TrEMBL),   A0A8C0T336 (UniProtKB/TrEMBL),   A0A8C0R7L1 (UniProtKB/TrEMBL),   A0A8C0LN04 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022268944   ⟸   XM_022413236
- Peptide Label: isoform X2
- UniProtKB: A0A8P0NZL0 (UniProtKB/TrEMBL),   A0A8C0LN04 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038373759   ⟸   XM_038517831
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038373758   ⟸   XM_038517830
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038373760   ⟸   XM_038517832
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038501710   ⟸   XM_038645782
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038501709   ⟸   XM_038645781
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038501711   ⟸   XM_038645783
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038299338   ⟸   XM_038443410
- Peptide Label: isoform X2
- UniProtKB: A0A8P0NZL0 (UniProtKB/TrEMBL),   A0A8C0LN04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038299336   ⟸   XM_038443408
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T336 (UniProtKB/TrEMBL),   L7MTN8 (UniProtKB/TrEMBL),   A0A8C0R7L1 (UniProtKB/TrEMBL),   A0A8C0LN04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038299339   ⟸   XM_038443411
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LH62 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038299337   ⟸   XM_038443409
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LN04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317780   ⟸   XM_038461852
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LH62 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437330   ⟸   XM_038581402
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LN04 (UniProtKB/TrEMBL),   A0A8P0NZL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437329   ⟸   XM_038581401
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LN04 (UniProtKB/TrEMBL),   A0A8C0R7L1 (UniProtKB/TrEMBL),   A0A8C0T336 (UniProtKB/TrEMBL),   L7MTN8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437331   ⟸   XM_038581403
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LH62 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845034794   ⟸   ENSCAFT00845044401
Ensembl Acc Id: ENSCAFP00845034953   ⟸   ENSCAFT00845044613
Ensembl Acc Id: ENSCAFP00845035194   ⟸   ENSCAFT00845044908
Ensembl Acc Id: ENSCAFP00845034340   ⟸   ENSCAFT00845043822
Ensembl Acc Id: ENSCAFP00845035109   ⟸   ENSCAFT00845044802
Ensembl Acc Id: ENSCAFP00845034539   ⟸   ENSCAFT00845044081
Protein Domains
C2   DH   EF-hand   EH   PH   SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000032318 UniProtKB/TrEMBL
  ENSCAFG00030007144 UniProtKB/TrEMBL
  ENSCAFG00040018489 UniProtKB/TrEMBL
  ENSCAFG00845024761 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000015128.5 UniProtKB/TrEMBL
  ENSCAFT00000015145.6 UniProtKB/TrEMBL
  ENSCAFT00000061632.2 UniProtKB/TrEMBL
  ENSCAFT00000062126.2 UniProtKB/TrEMBL
  ENSCAFT00000066853.2 UniProtKB/TrEMBL
  ENSCAFT00000075250.2 UniProtKB/TrEMBL
  ENSCAFT00030013339.1 UniProtKB/TrEMBL
  ENSCAFT00030013372.1 UniProtKB/TrEMBL
  ENSCAFT00030013480.1 UniProtKB/TrEMBL
  ENSCAFT00030013575.1 UniProtKB/TrEMBL
  ENSCAFT00030013603.1 UniProtKB/TrEMBL
  ENSCAFT00030013689.1 UniProtKB/TrEMBL
  ENSCAFT00030013820.1 UniProtKB/TrEMBL
  ENSCAFT00040034363.1 UniProtKB/TrEMBL
  ENSCAFT00040034441.1 UniProtKB/TrEMBL
  ENSCAFT00040034510.1 UniProtKB/TrEMBL
  ENSCAFT00040034556.1 UniProtKB/TrEMBL
  ENSCAFT00040034610.1 UniProtKB/TrEMBL
  ENSCAFT00040034656.1 UniProtKB/TrEMBL
  ENSCAFT00845043822.1 UniProtKB/TrEMBL
  ENSCAFT00845044081 ENTREZGENE
  ENSCAFT00845044081.1 UniProtKB/TrEMBL
  ENSCAFT00845044401 ENTREZGENE
  ENSCAFT00845044401.1 UniProtKB/TrEMBL
  ENSCAFT00845044613.1 UniProtKB/TrEMBL
  ENSCAFT00845044802 ENTREZGENE
  ENSCAFT00845044802.1 UniProtKB/TrEMBL
  ENSCAFT00845044908.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.900.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro C2_dom UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  DBL_dom_sf UniProtKB/TrEMBL
  DH-domain UniProtKB/TrEMBL
  EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  EH_dom UniProtKB/TrEMBL
  Endocytic_GEF_Adapter UniProtKB/TrEMBL
  GDS_CDC24_CS UniProtKB/TrEMBL
  INTAP UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
KEGG Report cfa:478409 UniProtKB/TrEMBL
NCBI Gene ITSN1 ENTREZGENE
PANTHER EH DOMAIN UniProtKB/TrEMBL
  INTERSECTIN-1 UniProtKB/TrEMBL
  INTERSECTIN-2 ISOFORM X1 UniProtKB/TrEMBL
  RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A UniProtKB/TrEMBL
Pfam EF-hand_4 UniProtKB/TrEMBL
  INTAP UniProtKB/TrEMBL
  PF00168 UniProtKB/TrEMBL
  PH_13 UniProtKB/TrEMBL
  RhoGEF UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
  SH3_2 UniProtKB/TrEMBL
  SH3_9 UniProtKB/TrEMBL
PRINTS P67PHOX UniProtKB/TrEMBL
  SH3DOMAIN UniProtKB/TrEMBL
PROSITE DH_1 UniProtKB/TrEMBL
  DH_2 UniProtKB/TrEMBL
  EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/TrEMBL
  PS50004 UniProtKB/TrEMBL
  PS50031 UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
SMART EFh UniProtKB/TrEMBL
  RhoGEF UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
  SM00027 UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
  SM00239 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
  SSF48065 UniProtKB/TrEMBL
  SSF49562 UniProtKB/TrEMBL
  SSF50044 UniProtKB/TrEMBL
UniProt A0A8C0LH62 ENTREZGENE
  A0A8C0LN04 ENTREZGENE
  A0A8C0MHT0_CANLF UniProtKB/TrEMBL
  A0A8C0MKW4_CANLF UniProtKB/TrEMBL
  A0A8C0MNQ5_CANLF UniProtKB/TrEMBL
  A0A8C0R7L1 ENTREZGENE
  A0A8C0RES9_CANLF UniProtKB/TrEMBL
  A0A8C0T2M5_CANLF UniProtKB/TrEMBL
  A0A8C0T336 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T5U3_CANLF UniProtKB/TrEMBL
  A0A8C0T677_CANLF UniProtKB/TrEMBL
  A0A8I3PKP9_CANLF UniProtKB/TrEMBL
  A0A8I3PPV6_CANLF UniProtKB/TrEMBL
  A0A8I3PU15_CANLF UniProtKB/TrEMBL
  A0A8I3PUJ5_CANLF UniProtKB/TrEMBL
  A0A8P0NZL0 ENTREZGENE, UniProtKB/TrEMBL
  F1PHV6_CANLF UniProtKB/TrEMBL
  L7MTN8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-14 ITSN1  intersectin 1  LOC100856635  intersectin-1  Data merged from RGD:12262716 737654 PROVISIONAL