ITSN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 31 | 29,144,754 - 29,360,134 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 31 | 28,243,620 - 28,459,926 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 31 | 28,451,006 - 28,667,391 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 31 | 28,451,116 - 28,661,479 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 31 | 28,317,804 - 28,534,014 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 31 | 28,331,715 - 28,548,460 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 31 | 28,831,446 - 29,047,794 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
ITSN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 21 | 33,642,501 - 33,899,861 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 21 | 33,642,400 - 33,899,861 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 21 | 35,014,807 - 35,272,165 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 21 | 33,936,654 - 34,183,479 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 21 | 33,936,653 - 34,183,479 | NCBI | | | | | Celera | 21 | 20,214,405 - 20,461,193 (+) | NCBI | | Celera | | | Cytogenetic Map | 21 | q22.11 | NCBI | | | | | HuRef | 21 | 20,493,109 - 20,739,668 (+) | NCBI | | HuRef | | | CHM1_1 | 21 | 34,577,248 - 34,824,084 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 21 | 32,024,315 - 32,281,564 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Itsn1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 91,526,198 - 91,717,479 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 91,526,169 - 91,717,485 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 91,729,310 - 91,920,591 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 91,729,281 - 91,920,597 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 91,729,616 - 91,920,824 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 91,671,052 - 91,800,868 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 92,808,009 - 93,004,876 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | C4 | NCBI | | | | | cM Map | 16 | 53.28 | NCBI | | | | |
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Itsn1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 11 | 44,464,515 - 44,646,598 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 30,978,590 - 31,160,645 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 30,978,590 - 31,160,645 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 39,672,533 - 39,854,583 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 32,343,963 - 32,526,016 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 31,506,203 - 31,688,572 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 31,943,119 - 32,069,249 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 31,893,489 - 32,069,249 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 35,547,331 - 35,672,959 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 31,721,528 - 31,901,963 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 31,815,217 - 31,903,071 (+) | NCBI | | | | | Celera | 11 | 30,687,099 - 30,812,424 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q11 | NCBI | | | | |
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Itsn1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955407 | 33,113,319 - 33,275,675 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955407 | 33,056,004 - 33,275,681 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ITSN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 22 | 29,759,728 - 30,017,340 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 21 | 24,617,929 - 24,875,764 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 21 | 20,009,385 - 20,266,835 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 21 | 33,381,640 - 33,625,603 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 21 | 33,457,081 - 33,625,248 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Itsn1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404971 | 28,789,742 - 28,977,174 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936500 | 8,468,940 - 8,612,942 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936500 | 8,490,514 - 8,678,127 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ITSN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 197,249,061 - 197,481,245 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 197,301,515 - 197,492,537 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 207,205,545 - 207,267,672 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ITSN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 58,298,529 - 58,543,297 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 58,301,399 - 58,543,281 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666071 | 805,376 - 1,047,516 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Itsn1 (Heterocephalus glaber - naked mole-rat) |
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