Advanced Search (OLGA)

Gene: RPL15 (ribosomal protein L15) Canis lupus familiaris

Subscribe to Updates

Analyze

Symbol:

RPL15

Name:

ribosomal protein L15

RGD ID:

12212686

Description:

ENCODES a protein that exhibits structural constituent of ribosome (inferred); INVOLVED IN response to ethanol (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 12 (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN A band (ortholog); cytosolic large ribosomal subunit (ortholog)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

60S ribosomal protein L15; large ribosomal subunit protein eL15

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RPL15 (ribosomal protein L15)	HGNC	EggNOG, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Rpl15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rpl15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rpl15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RPL15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rpl15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RPL15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RPL15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rpl15 (ribosomal protein L15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	19,825,622 - 19,829,807 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	19,825,622 - 19,829,807 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	19,823,714 - 19,827,899 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	20,138,613 - 20,142,803 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	20,138,623 - 20,142,770 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	19,947,937 - 19,952,126 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	20,057,167 - 20,061,348 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	20,166,279 - 20,170,467 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RPL15	Dog	Diamond-Blackfan anemia 12		ISO	RPL15 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:23812780 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RPL15	Dog	Disease Progression		ISO	RPL15 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21364753
RPL15	Dog	Stomach Neoplasms		ISO	RPL15 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21364753

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RPL15	Dog	Diamond-Blackfan anemia 12		ISO	RPL15 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RPL15	Dog	cytoplasmic translation	involved_in	IBA	PANTHER:PTN000217960 more ...	150520179		GO_Central	GO_REF:0000033
RPL15	Dog	response to ethanol		ISO	Rpl15 (Rattus norvegicus)	9068941		RGD	PMID:1448059 and REF_RGD_ID:10769365
RPL15	Dog	translation	involved_in	IEA	InterPro:IPR000439 more ...	150520179		InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RPL15	Dog	A band		ISO	Rpl15 (Rattus norvegicus)	9068941		RGD	PMID:2188648 and REF_RGD_ID:11036104
RPL15	Dog	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
RPL15	Dog	cytoplasm	located_in	IEA	UniProtKB:Q9CZM2 and ensembl:ENSMUSP00000079163	150520179		Ensembl	GO_REF:0000107
RPL15	Dog	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
RPL15	Dog	cytosolic large ribosomal subunit		ISO	Rpl15 (Rattus norvegicus)	9068941		RGD	PMID:863909 and REF_RGD_ID:11036088
RPL15	Dog	cytosolic large ribosomal subunit	part_of	IEA	UniProtKB:P61313 more ...	150520179		Ensembl	GO_REF:0000107
RPL15	Dog	cytosolic large ribosomal subunit	part_of	IBA	MGI:1913730 more ...	150520179		GO_Central	GO_REF:0000033
RPL15	Dog	cytosolic ribosome	part_of	IEA	UniProtKB:P61313 and ensembl:ENSP00000309334	150520179		Ensembl	GO_REF:0000107
RPL15	Dog	nucleus	located_in	IEA	UniProtKB:P61313 and ensembl:ENSP00000309334	150520179		Ensembl	GO_REF:0000107
RPL15	Dog	ribonucleoprotein complex	part_of	IEA	UniProtKB-KW:KW-0687	150520179		UniProt	GO_REF:0000043
RPL15	Dog	ribosomal subunit	part_of	IEA	ARBA:ARBA00027734	150520179		UniProt	GO_REF:0000117
RPL15	Dog	ribosome	located_in	IEA	UniProtKB-KW:KW-0689	150520179		UniProt	GO_REF:0000043
RPL15	Dog	ribosome	located_in	IEA	InterPro:IPR000439 more ...	150520179		InterPro	GO_REF:0000002
RPL15	Dog	synapse	is_active_in	IEA	UniProtKB:Q9CZM2 and ensembl:ENSMUSP00000079163	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RPL15	Dog	protein binding	enables	ISO	UniProtKB:Q6FHY5	9068941	PMID:32296183	IntAct	PMID:32296183
RPL15	Dog	protein binding	enables	ISO	UniProtKB:P19712-PRO_0000038050	9068941	PMID:24965446	AgBase	PMID:24965446
RPL15	Dog	protein binding	enables	ISO	UniProtKB:P42858 and UniProtKB:P54253	9068941	PMID:32814053	IntAct	PMID:32814053
RPL15	Dog	protein binding	enables	ISO	UniProtKB:P50222	9068941	PMID:25416956	IntAct	PMID:25416956
RPL15	Dog	protein binding	enables	ISO	UniProtKB:P09914	9068941	PMID:21612406	UniProt	PMID:21612406
RPL15	Dog	RNA binding	enables	IBA	PANTHER:PTN000217960 more ...	150520179		GO_Central	GO_REF:0000033
RPL15	Dog	structural constituent of ribosome	enables	IEA	UniProtKB:P61313 more ...	150520179		Ensembl	GO_REF:0000107
RPL15	Dog	structural constituent of ribosome	enables	IBA	FB:FBgn0028697 more ...	150520179		GO_Central	GO_REF:0000033
RPL15	Dog	structural constituent of ribosome	enables	IEA	InterPro:IPR000439 more ...	150520179		InterPro	GO_REF:0000002

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RPL15	Dog	ribosome biogenesis pathway		ISO	RPL15 (Homo sapiens)	9068941		RGD	PMID:23636399 more ...
RPL15	Dog	translation pathway		ISO	RPL15 (Homo sapiens)	9068941		RGD	PMID:23636399 and REF_RGD_ID:10002762

PMID:16341006	PMID:18400176	PMID:22301074	PMID:30032202	PMID:37756605

RPL15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	19,825,622 - 19,829,807 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	19,825,622 - 19,829,807 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	19,823,714 - 19,827,899 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	20,138,613 - 20,142,803 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	20,138,623 - 20,142,770 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	19,947,937 - 19,952,126 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	20,057,167 - 20,061,348 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	20,166,279 - 20,170,467 (-)	NCBI		UU_Cfam_GSD_1.0

RPL15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	23,916,545 - 23,924,631 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	23,916,591 - 23,924,374 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	23,958,036 - 23,966,122 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	23,933,643 - 23,937,338 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	23,933,642 - 23,937,334	NCBI
Celera	3	23,894,829 - 23,898,524 (+)	NCBI		Celera
Cytogenetic Map	3	p24.2	NCBI
HuRef	3	23,904,389 - 23,911,124 (+)	NCBI		HuRef
CHM1_1	3	23,910,110 - 23,917,002 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	23,921,321 - 23,929,407 (+)	NCBI		T2T-CHM13v2.0

Rpl15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	4,198,710 - 4,201,873 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	4,198,305 - 4,201,873 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	18,267,823 - 18,270,986 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	18,267,823 - 18,271,391 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	19,100,337 - 19,103,500 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	21,935,943 - 21,959,487 (-)	NCBI		MGSCv36	mm8
Celera	14	13,960,053 - 13,963,216 (-)	NCBI		Celera
Cytogenetic Map	14	A1	NCBI
cM Map	14	7.08	NCBI

Rpl15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	9,934,663 - 9,937,946 (+)	NCBI		GRCr8
mRatBN7.2	15	7,503,883 - 7,507,166 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	10,227,171 - 10,228,000 (+)	Ensembl		mRatBN7.2 Ensembl
mRatBN7.2 Ensembl	15	7,503,883 - 7,507,165 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	9,649,553 - 9,652,826 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	10,562,350 - 10,565,623 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	8,862,768 - 8,866,041 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	8,188,717 - 8,192,153 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	8,189,253 - 8,192,152 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	12,250,776 - 12,254,212 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	9,082,190 - 9,085,473 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	15	7,557,178 - 7,560,461 (+)	NCBI		Celera
Cytogenetic Map	15	p16	NCBI

Rpl15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955430	15,766,465 - 15,769,239 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955430	15,766,465 - 15,769,239 (+)	NCBI	ChiLan1.0	ChiLan1.0

RPL15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	23,877,684 - 23,880,508 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	23,882,529 - 23,885,280 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	23,829,041 - 23,832,838 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	24,152,223 - 24,156,509 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	24,152,479 - 24,157,337 (+)	Ensembl	panpan1.1		panPan2

Rpl15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	182,433,258 - 182,437,239 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	15,571,912 - 15,576,462 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	15,571,897 - 15,575,812 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPL15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	10,716,002 - 10,719,952 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	10,716,373 - 10,719,959 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	12,164,825 - 12,167,957 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RPL15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	68,596,897 - 68,599,575 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	68,596,968 - 68,599,389 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	41,720,551 - 41,723,247 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rpl15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624788	1,639,620 - 1,644,482 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624788	1,639,138 - 1,642,048 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in RPL15
76 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	NM_001313778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038431600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_857783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000009299 ⟹ ENSCAFP00000008630

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	19,825,622 - 19,829,807 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845034794 ⟹ ENSCAFP00845027253

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	20,138,623 - 20,142,770 (-)	Ensembl

RefSeq Acc Id:

NM_001313778 ⟹ NP_001300707

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	19,825,622 - 19,829,807 (-)	NCBI
Dog10K_Boxer_Tasha	23	19,823,714 - 19,827,899 (-)	NCBI
ROS_Cfam_1.0	23	20,138,616 - 20,142,803 (-)	NCBI
UMICH_Zoey_3.1	23	19,947,937 - 19,952,126 (-)	NCBI
UNSW_CanFamBas_1.0	23	20,057,167 - 20,061,348 (-)	NCBI
UU_Cfam_GSD_1.0	23	20,166,279 - 20,170,467 (-)	NCBI

Sequence:

show sequence

GTGGGAGAAGGGCTCTTTCCTTTCCGTCTGGCGGCAGCCATCAGGGTAGGCCGAGATGGGTGCGTACAAGTACATCCAGGAGCTATGGAGGAAGAAGCAGTCCGACGTCATGCGCTTTCTTCTCCGGG
TGCGCTGCTGGCAATATCGCCAGCTCTCTGCGCTCCACAGGGCCCCCCGCCCAACCCGGCCCGATAAAGCGCGCAGACTGGGCTACAAGGCCAAGCAAGGTTATGTCATATATCGGATTCGTGTGCGT
CGTGGTGGCCGCAAACGCCCAGTTCCTAAGGGTGCTACCTATGGCAAGCCTGTCCATCATGGTGTTAACCAGCTAAAGTTTGCCCGAAGCCTTCAGTCTGTTGCAGAGGAGCGAGCTGGACGCCACTG
CGGAGCTCTGAGAGTCTTGAATTCTTATTGGGTTGGCGAAGATTCCACATACAAATTCTTTGAGGTTATCCTCATTGATCCATTCCATAAAGCTATCAGAAGAAATCCTGACACCCAGTGGATCACCA
AACCAGTCCACAAACACAGGGAGATGCGAGGGCTGACCTCTGCAGGCCGCAAGAGTCGTGGCCTTGGGAAGGGTCACAAGTTCCACCACACTATTGGTGGTTCTCGCCGTGCGGCATGGAGAAGGCGC
AATACTCTCCAGCTCCACCGTTACCGCTAATATAAGTAATGTTTGTAAAATTCTTACCTAATAAACAATTTAGGACAGTCATGTCTGCTTAAAAGTGTTCTTTAATTTGTCTGTTAAAATTAGTTGTC
TGCAGATTGTCCCATGAATGCATTGTCAAATTATGAAAAGTGCAATAATGTTTGAAGACTATAAGTGATGGTGTATCTTGTTTCTAATAAGATAAACGCTTTTGTCTTTGCTTTATCTTATTAGGGAG
TTTATATGTCAGTGTTTAAAATGCTGTTTGGTATAATAGGTGTAAAATAAATTCTGTAAAAGTGGAATGCAGAAGCTAGCCATGTAGATTTGTTGGTGCATGTAATGAAACCTACAGCTTCATGGGGT
GCTGAGATGCTCTGGTTTACTCTCAAATGGCCGTTTTTAGGGGTTTGGTAAGAACAACCTTTTTAAACTGGATTTTGCTTAGAAATGTGAAAAAATATCCTAATCTTTAATCGTGATCGTATGCAGAA
CAGTGTTAAATAGGAAACACATTTTTAGATTGAATCCAGTGTTCCAATTATGTAACTGCTGCTTTGGAAAGAATGCCACCATTTTTAAAAAATTGAACAAACCTGTTGTAAGAAGGTTTTCTTAAAAA
TGAAAATAATTCTGCACAATGGAAGCAAAATTGCATGGGTTTCCTCCACAGTACCATTGAAATCCACATAAAAAGTGGAGGCTCCTGGTTTTATCCCACAACTTAATGTAGAATACCGAATTTCATAC
TAAGCAGTCAGTTAATGGTATTTACTCTGGTCTATATGAAAACTGATGGAAATTGAACATTAGGCAAATAAGACTTTACCTTAAGGTTTGTAAGCTAGTAACTAATGCTAGAATTGGGAAAATGGTGA
CCATCAGCCTTTCAAGTGTGAAGATAAAGTTAACTTTGATCAGAATTTTAAATACTTTATCCCTGGTCTTTATCCACTAGACACCTTAGAGGAAAAAATAGGGTTGGCTTTAAAAGTACATCATTACT
CATTCCAAGTACTAATTCTCTGGGTCAACCCACTTGTCCAATTCCCTTAGGCTATTGAGAAAGTCTCCTAGTTGGTGTCAATATGTCAGTTTCCATTCTGATCCTTACATGTGTTCTCCACAGTTAAC
TTTTCTCATCCTTATTCAGACCCCTCAAAATACTTGCCATTGCATAAACTTGCCAGCCCAGTTGTGCCCACCTTGATGTAAGGTATACCACCACATTGTTTCCATTCTGTCTTCCAGTAGATGAGGTT
TCTGTTTCCCAGAGTGAATTTGAGGAAACAAAGGAGAGGAATTGCCCCAGTTCCAAGTTTGCTGGCTTAATCCATCTAATTGCTGGTTTCCTTGAAGCAGTTTTTATATTTTTTTTCAGGAGTCTTAG
GCGTAGTTAAATGATTTCCAGAAAACAGGCTCAAAACCTTGAGACCTAAATTCCTTTCCACTCAAAAAGAGATCCTAAACCATATATTTTGTGTGTAGAGTTTGTTCAACTAAAGGAATAAATGTTTA
TTAAACTAAAATGGACCTGTTATTTCTTGTCATCTAGTACTAATAAGCAAACCAAATACCCTAACGAAAAAATTGTAATGGCAGAAACAGCTACTTTGAGAGGAAATAAAATACGGTACTTAGTCTTG
A

hide sequence

RefSeq Acc Id:

XM_038431600 ⟹ XP_038287528

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	20,138,613 - 20,142,783 (-)	NCBI


Protein RefSeqs	NP_001300707	(Get FASTA)	NCBI Sequence Viewer
	XP_038287528	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	E2QXF3	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000008630.3
	ENSCAFP00030036969.1
	ENSCAFP00040035951.1
	ENSCAFP00845027253

RefSeq Acc Id:

NP_001300707 ⟸ NM_001313778

- UniProtKB:

E2QXF3 (UniProtKB/Swiss-Prot), A0A8C0LLJ9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYK
FFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR

hide sequence

Ensembl Acc Id:

ENSCAFP00000008630 ⟸ ENSCAFT00000009299

RefSeq Acc Id:	XP_038287528 ⟸ XM_038431600
- Peptide Label:	isoform X1
- UniProtKB:	E2QXF3 (UniProtKB/Swiss-Prot), A0A8C0LLJ9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845027253 ⟸ ENSCAFT00845034794

RGD ID:

13687430

Promoter ID:

EPDNEW_C5497

Type:

multiple initiation site

Name:

RPL15_1

Description:

60S ribosomal protein L15

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	19,829,011 - 19,829,071	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005764	Ensembl, UniProtKB/Swiss-Prot
	ENSCAFG00030022972	UniProtKB/Swiss-Prot
	ENSCAFG00040022162	UniProtKB/Swiss-Prot
	ENSCAFG00845019729	Ensembl, ENTREZGENE
Ensembl Transcript	ENSCAFT00000009299.5	UniProtKB/Swiss-Prot
	ENSCAFT00030042369.1	UniProtKB/Swiss-Prot
	ENSCAFT00040041226.1	UniProtKB/Swiss-Prot
	ENSCAFT00845034794	ENTREZGENE
Gene3D-CATH	3.40.1120.10	UniProtKB/Swiss-Prot
InterPro	Rbsml_L15e_core_dom_sf	UniProtKB/Swiss-Prot
	Ribosomal_L15e	UniProtKB/Swiss-Prot
	Ribosomal_L15e_CS	UniProtKB/Swiss-Prot
	Ribosomal_L23/L15e_core_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	cfa:477046	UniProtKB/Swiss-Prot
NCBI Gene	RPL15	ENTREZGENE
PANTHER	60S RIBOSOMAL PROTEIN L15	UniProtKB/Swiss-Prot
	PTHR11847	UniProtKB/Swiss-Prot
Pfam	Ribosomal_L15e	UniProtKB/Swiss-Prot
PROSITE	RIBOSOMAL_L15E	UniProtKB/Swiss-Prot
SMART	Ribosomal_L15e	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF54189	UniProtKB/Swiss-Prot
UniProt	A0A8C0LLJ9	ENTREZGENE
	A0A8I3S1A1_CANLF	UniProtKB/TrEMBL
	A0A8P0PJF3_CANLF	UniProtKB/TrEMBL
	E2QXF3	ENTREZGENE, UniProtKB/Swiss-Prot
VGNC ID	VGNC:52901	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations