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TRANSLATION PATHWAY (PW:0000101)

View Ontology Report

Description

Translation is the final stage in the expression of protein-coding genes, whereby the genetic information encoded in the mature mRNA transcript is decoded into the polypeptide chain. At its core is the ribosome, the massive 80S ribonucleoprotein complex whose small 40S subunit is the mRNA decoder and the large 60S subunit carries out the peptidyl transferase reaction, along with the mature mRNA whose sequence will be read, and the aminoacylated tRNA whose load will be transferred to the nascent

Pathway Diagram:

Elsevier Inc. Eif4a Eif4g Eef1a1 no-go mRNA decay pathway nonsense-mediated mRNA decay pathway nonstop mRNA decay pathway Met Met. Etf1 ---> peptidyl-tRNA hydrolysis GTPt EIf5b 60S subunit ---- EIf5b 48S IC ---- 60S subunit 60S subunit 48S IC 80S ribosome IC mRNA scanning Dhx29 ---> 43S PIC 43S PIC Eif4a ---- Eif4g Eif4g ---- Pabpc1 Pabpc1 stop codon recognition peptide release peptidyl-tRNA hydrolysis stalled 80S Eef2 translocation PIC formation Pelo ---- stalled 80S ribosome recyling subunit dissociation aa3. aa2. aa3 aa2 deacylated-tRNA peptidyl-tRNA aa-tRNA cognate-tRNA mRNA structure ribosome biogenesis pathway translation initiation pathway aminoacyl-tRNA biosynthetic pathway mRNA nuclear export pathway spliceosome pathway Eif1a ---- EIf5b Eif2 trimer ---- Eif2b pentamer Eif5 Met-tRNA cog-tRNAe POST-translocation peptidyl-tRNA ---> deacylated-tRNA GTPe. ---> GDPe. PRE-translocation ---> POST-translocation GDP ---> GTP Eif2b pentamer Eif2 trimer EIF3 complex Eif1a Eif1 Hbs1l Eef1b2 Eif4h --+> Eif4a Eif4b Dhx29 Eif4e Eif4h GTP ---> GDP 48S IC ---- EIf5b Eif4b --+> Eif4a ribosome biogenesis pathway ---> translation initiation pathway cognate-tRNA ---> cog-tRNAe GSPT1 ---- GTPt GDPe ---> GTPe aminoacyl-tRNA biosynthetic pathway ---> aa-tRNA aa-tRNA ---- Eef1a1 Eef1a1 ---- GDPe Eef1a1 ---- GTPe Eif2 trimer ---- Met-tRNA aminoacyl-tRNA biosynthetic pathway ---> Met-tRNA Eif2 trimer ---- Eif5 EIF3 complex ---- Eif4g 40S subunit ---- Eif1 40S subunit ---- Eif2 trimer 40S subunit ---- Eif1a 40S subunit ---- Eif5 40S subunit ---- EIF3 complex Eif4e ---- Eif4g Eif2 trimer ---- GDP aa3 ---> aa2 mRNA nuclear export pathway ---> Eif4e spliceosome pathway ---> mRNA nuclear export pathway 80S ribosome IC ---- EIf5b Hbs1l ---- Pelo Etf1 ---- stop codon recognition mRNA structure ---- Pelo no stop codon ---- Pelo translation elongation pathway translation termination pathway GTPe ---> GDPe Eif2 trimer ---- GTP Eef2 ---- GTPe. PRE-translocation Eef2 ---- GDPe. Abce1 ---- stalled 80S Pelo Abce1 ---- Pelo Abce1 ---> subunit dissociation Abce1 Etf1 GDPt ---- GSPT1 GTPt ---> GDPt Etf1 ---- GSPT1 Abce1 ---- Etf1 GSPT1 --+> peptide release 40S subunit ---> 43S PIC GSPT1 GTP GTPe GTPe. GDP GDPe. GDPe GDPt 40S subunit premature stop codon no stop codon Etf1 ---- premature stop codon
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Genes in Pathway:


show annotations for term's descendants           Sort by:
translation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fau FAU ubiquitin like and ribosomal protein S30 fusion ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742
JBrowse link
G Rpl10 ribosomal protein L10 ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:152,054,562...152,056,769
Ensembl chr  X:152,054,452...152,056,761
JBrowse link
G Rpl10a ribosomal protein L10A ISO RGD PMID:23636399 RGD:10002762 NCBI chr20:6,388,800...6,391,358
Ensembl chr20:6,385,823...6,391,357
JBrowse link
G Rpl11 ribosomal protein L11 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rpl12 ribosomal protein L12 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:16,264,269...16,266,645
Ensembl chr 3:16,264,251...16,266,642
JBrowse link
G Rpl13 ribosomal protein L13 ISO RGD PMID:23636399 RGD:10002762 NCBI chr19:51,153,990...51,156,541
Ensembl chr19:51,153,924...51,163,014
JBrowse link
G Rpl13a ribosomal protein L13A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
G Rpl14 ribosomal protein L14 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:120,286,035...120,289,160
Ensembl chr 8:120,284,645...120,289,064
JBrowse link
G Rpl15 ribosomal protein L15 ISO RGD PMID:23636399 RGD:10002762 NCBI chr15:7,503,883...7,507,166
Ensembl chr15:7,503,883...7,507,165
JBrowse link
G Rpl17 ribosomal protein L17 ISO RGD PMID:23636399 RGD:10002762 NCBI chr18:68,581,141...68,584,253
Ensembl chr18:68,581,098...68,584,253
JBrowse link
G Rpl18 ribosomal protein L18 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:96,188,811...96,191,452
Ensembl chr 1:96,188,112...96,191,452
JBrowse link
G Rpl18a ribosomal protein L18A ISO RGD PMID:23636399 RGD:10002762 NCBI chr16:18,542,555...18,544,578
Ensembl chr16:18,542,566...18,545,546
JBrowse link
G Rpl19 ribosomal protein L19 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:83,022,503...83,026,030
Ensembl chr10:83,019,257...83,052,112
JBrowse link
G Rpl21 ribosomal protein L21 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:8,268,641...8,272,278
Ensembl chr12:8,267,196...8,272,281
Ensembl chr 3:8,267,196...8,272,281
Ensembl chr13:8,267,196...8,272,281
JBrowse link
G Rpl22 ribosomal protein L22 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:162,835,241...162,843,394
Ensembl chr 5:162,833,740...162,843,368
Ensembl chr 7:162,833,740...162,843,368
Ensembl chr 4:162,833,740...162,843,368
JBrowse link
G Rpl23 ribosomal protein L23 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870
JBrowse link
G Rpl23a ribosomal protein L23A ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:63,076,660...63,079,346
Ensembl chr10:63,076,066...63,079,346
JBrowse link
G Rpl24 ribosomal protein L24 ISO RGD PMID:23636399 RGD:10002762 NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370
JBrowse link
G Rpl26 ribosomal protein L26 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Rpl27 ribosomal protein L27 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:86,375,511...86,379,210
Ensembl chr10:86,375,454...86,379,193
JBrowse link
G Rpl27a ribosomal protein L27A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:163,539,732...163,542,771 JBrowse link
G Rpl28 ribosomal protein L28 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:69,052,148...69,054,735
Ensembl chr 1:69,053,203...69,055,032
JBrowse link
G Rpl29 ribosomal protein L29 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:107,068,929...107,070,963
Ensembl chr 8:107,068,480...107,070,914
JBrowse link
G Rpl3 ribosomal protein L3 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:111,622,255...111,627,640
Ensembl chr 7:111,621,610...111,636,468
JBrowse link
G Rpl30 ribosomal protein L30 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:65,648,266...65,651,401
Ensembl chr 7:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
JBrowse link
G Rpl31 ribosomal protein L31 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:41,647,397...41,651,441
Ensembl chr 9:41,647,426...41,662,129
JBrowse link
G Rpl32 ribosomal protein L32 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 4:148,864,048...148,867,612
Ensembl chr 4:148,864,044...148,867,612
JBrowse link
G Rpl34 ribosomal protein L34 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:219,284,373...219,288,108
Ensembl chr 2:219,284,382...219,288,111
JBrowse link
G Rpl35 ribosomal protein L35 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:22,753,255...22,756,217
Ensembl chr 3:22,753,253...22,756,243
JBrowse link
G Rpl35a ribosomal protein L35A ISO RGD PMID:23636399 RGD:10002762 NCBI chr11:67,726,031...67,729,953
Ensembl chr11:67,726,032...67,729,942
Ensembl chr 5:67,726,032...67,729,942
JBrowse link
G Rpl36 ribosomal protein L36 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:1,441,986...1,447,397
Ensembl chr 6:98,809,534...98,809,897
JBrowse link
G Rpl36a ribosomal protein L36A ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:97,766,179...97,768,892
Ensembl chr  X:97,766,179...97,768,892
JBrowse link
G Rpl37 ribosomal protein L37 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:54,215,469...54,217,429
Ensembl chr 2:54,215,469...54,217,442
JBrowse link
G Rpl37a ribosomal protein L37A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:74,298,843...74,300,926 JBrowse link
G Rpl37l1 ribosomal protein L37-like 1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:61,033,799...61,034,157
Ensembl chr10:61,033,797...61,034,168
Ensembl chr 9:61,033,797...61,034,168
JBrowse link
G Rpl38 ribosomal protein L38 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004
Ensembl chr14:99,701,362...99,705,004
Ensembl chr 3:99,701,362...99,705,004
Ensembl chr 2:99,701,362...99,705,004
Ensembl chr16:99,701,362...99,705,004
JBrowse link
G Rpl39 ribosomal protein L39 ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:116,327,216...116,330,211
Ensembl chr18:6,326,330...6,326,692
Ensembl chr  X:6,326,330...6,326,692
JBrowse link
G Rpl4 ribosomal protein L4 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
JBrowse link
G Rpl5 ribosomal protein L5 ISO RGD PMID:23636399 RGD:10002762 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rpl6 ribosomal protein L6 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:35,347,493...35,352,011
Ensembl chr12:35,347,497...35,351,921
JBrowse link
G Rpl7 ribosomal protein L7 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rpl7a ribosomal protein L7A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:10,239,026...10,241,703
Ensembl chr 3:10,239,001...10,241,716
JBrowse link
G Rpl8 ribosomal protein L8 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:108,626,194...108,628,485
Ensembl chr 7:108,622,324...108,628,482
Ensembl chr 3:108,622,324...108,628,482
JBrowse link
G Rpl9 ribosomal protein L9 ISO RGD PMID:23636399 RGD:10002762 NCBI chr14:42,893,945...42,897,140
Ensembl chr14:42,893,942...42,897,136
Ensembl chr 3:42,893,942...42,897,136
JBrowse link
G Rplp0 ribosomal protein lateral stalk subunit P0 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:41,054,363...41,057,632
Ensembl chr12:41,054,179...41,057,632
JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:62,394,008...62,395,341
Ensembl chr 8:62,393,177...62,395,339
JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:196,546,086...196,548,636
Ensembl chr 1:196,546,352...196,548,645
JBrowse link
G Rps10 ribosomal protein S10 ISO RGD PMID:23636399 RGD:10002762 NCBI chr20:5,694,313...5,698,922
Ensembl chr20:5,694,313...5,699,044
Ensembl chr 6:5,694,313...5,699,044
JBrowse link
G Rps11 ribosomal protein S11 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:95,605,690...95,607,798
Ensembl chr 1:95,605,692...95,607,874
JBrowse link
G Rps12 ribosomal protein S12 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:21,680,854...21,683,010
Ensembl chr 1:21,680,852...21,683,014
JBrowse link
G Rps13 ribosomal protein S13 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355
JBrowse link
G Rps14 ribosomal protein S14 ISO RGD PMID:23636399 RGD:10002762 NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166
JBrowse link
G Rps15 ribosomal protein S15 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
JBrowse link
G Rps15a ribosomal protein S15a ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:172,420,151...172,427,021
Ensembl chr 1:172,419,761...172,426,995
JBrowse link
G Rps16 ribosomal protein S16 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
JBrowse link
G Rps17 ribosomal protein S17 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:135,295,920...135,298,506
Ensembl chr 1:135,295,919...135,298,535
Ensembl chr 8:135,295,919...135,298,535
JBrowse link
G Rps18 ribosomal protein S18 ISO RGD PMID:23636399 RGD:10002762 NCBI chr20:4,931,427...4,935,538
Ensembl chr10:101,204,500...101,205,146
Ensembl chr20:101,204,500...101,205,146
JBrowse link
G Rps19 ribosomal protein S19 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G Rps2 ribosomal protein S2 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:13,747,316...13,749,165
Ensembl chr10:13,747,301...13,749,163
JBrowse link
G Rps20 ribosomal protein S20 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:16,819,095...16,820,476
Ensembl chr 5:16,819,304...16,820,475
Ensembl chr 9:16,819,304...16,820,475
Ensembl chr 3:16,819,304...16,820,475
JBrowse link
G Rps21 ribosomal protein S21 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
JBrowse link
G Rps21-ps1 ribosomal protein S21, pseudogene 1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:153,387,133...153,387,476
Ensembl chr 5:153,387,176...153,387,427
JBrowse link
G Rps23 ribosomal protein S23 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:22,079,339...22,080,909
Ensembl chr 2:22,079,302...22,080,918
JBrowse link
G Rps24 ribosomal protein S24 ISO RGD PMID:23636399 RGD:10002762 NCBI chr16:89,538...94,267
Ensembl chr16:89,604...94,279
JBrowse link
G Rps25 ribosomal protein s25 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:44,733,623...44,735,999
Ensembl chr 8:44,733,029...44,737,271
JBrowse link
G Rps26 ribosomal protein S26 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:1,057,332...1,058,882 JBrowse link
G Rps27 ribosomal protein S27 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:175,665,858...175,666,963
Ensembl chr 2:175,665,853...175,666,964
JBrowse link
G Rps27a ribosomal protein S27a ISO RGD PMID:23636399 RGD:10002762 NCBI chr14:103,285,734...103,288,011
Ensembl chr14:103,285,734...103,288,011
Ensembl chr 5:103,285,734...103,288,011
JBrowse link
G Rps28 ribosomal protein S28 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
Ensembl chr16:14,607,801...14,609,170
JBrowse link
G Rps29 ribosomal protein S29 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 6:87,635,229...87,636,627
Ensembl chr 6:87,635,230...87,636,636
JBrowse link
G Rps3 ribosomal protein S3 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680
JBrowse link
G Rps3a ribosomal protein S3a ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:171,524,685...171,529,054
Ensembl chr 2:171,524,500...171,529,055
JBrowse link
G Rps4x ribosomal protein S4, X-linked ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:67,298,522...67,302,965
Ensembl chr  X:67,298,525...67,303,019
Ensembl chr 4:67,298,525...67,303,019
JBrowse link
G Rps5 ribosomal protein S5 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:73,538,776...73,543,073
Ensembl chr 1:73,538,776...73,543,073
JBrowse link
G Rps6 ribosomal protein S6 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602
JBrowse link
G Rps7 ribosomal protein S7 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145
JBrowse link
G Rps8 ribosomal protein S8 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:130,630,362...130,632,932
Ensembl chr 5:130,629,716...130,633,268
JBrowse link
G Rps9 ribosomal protein S9 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:65,511,723...65,515,076
Ensembl chr 1:65,511,723...65,515,123
JBrowse link
G Rpsa ribosomal protein SA ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247
JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr16:18,918,614...18,920,807
Ensembl chr16:18,900,616...18,920,807
JBrowse link
aminoacyl-tRNA biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 9:15,484,639...15,496,116
Ensembl chr 9:15,297,531...15,496,090
JBrowse link
G Cars1 cysteinyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 1:198,753,689...198,796,016
Ensembl chr 1:198,753,691...198,795,941
JBrowse link
G Dars1 aspartyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr13:39,857,936...39,913,055
Ensembl chr13:39,857,936...39,913,116
JBrowse link
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) IEA KEGG rno:00970 NCBI chr13:73,308,726...73,336,558
Ensembl chr13:73,308,726...73,336,934
JBrowse link
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:176,597,986...176,625,848
Ensembl chr 1:176,597,986...176,625,836
JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr13:96,901,548...96,971,966
Ensembl chr13:96,901,575...96,971,966
JBrowse link
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr17:28,319,215...28,746,217
Ensembl chr17:28,319,280...28,746,337
JBrowse link
G Farsa phenylalanyl-tRNA synthetase subunit alpha IEA KEGG rno:00970 NCBI chr19:23,291,409...23,300,985
Ensembl chr19:23,268,869...23,300,980
JBrowse link
G Farsb phenylalanyl-tRNA synthetase subunit beta IEA KEGG rno:00970 NCBI chr 9:79,887,852...79,947,082
Ensembl chr 9:79,887,842...79,947,045
JBrowse link
G Gars1 glycyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 4:84,171,596...84,212,609
Ensembl chr 4:84,171,596...84,212,609
JBrowse link
G Hars1 histidyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:28,381,649...28,398,699
Ensembl chr18:28,381,655...28,398,740
JBrowse link
G Iars1 isoleucyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr17:14,940,919...14,987,277
Ensembl chr17:14,940,924...14,987,237
JBrowse link
G Kars1 lysyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr19:39,957,846...39,976,837
Ensembl chr19:39,957,846...39,977,632
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931
JBrowse link
G Lars2 leucyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 8:123,010,271...123,106,395
Ensembl chr 8:123,010,293...123,106,395
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 7:63,121,142...63,138,550
Ensembl chr 7:63,121,142...63,138,495
JBrowse link
G Mars2 methionyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 9:56,720,408...56,729,991
Ensembl chr 9:56,720,983...56,723,820
JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase IEA KEGG rno:00970 NCBI chr 8:65,953,787...65,971,841
Ensembl chr 8:65,953,767...65,971,841
JBrowse link
G Nars1 asparaginyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:57,989,308...58,005,584
Ensembl chr18:57,989,308...58,005,622
JBrowse link
G Nars2 asparaginyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:151,300,446...151,412,086
Ensembl chr 1:151,300,467...151,413,521
JBrowse link
G Pars2 prolyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 5:121,433,993...121,439,158
Ensembl chr 5:121,434,096...121,439,154
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 8:109,207,705...109,215,738
Ensembl chr 8:109,207,705...109,215,739
JBrowse link
G Rars1 arginyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr10:20,270,744...20,295,192
Ensembl chr10:20,270,483...20,295,196
JBrowse link
G Rars2 arginyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 5:49,181,517...49,238,664
Ensembl chr 5:49,181,565...49,233,276
JBrowse link
G Sars1 seryl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 2:196,065,543...196,081,240
Ensembl chr 2:196,065,430...196,081,277
JBrowse link
G Sars2 seryl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:84,028,972...84,040,725
Ensembl chr 1:84,028,986...84,040,725
JBrowse link
G Tars1 threonyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 2:60,368,893...60,387,715
Ensembl chr 2:60,367,796...60,387,717
JBrowse link
G Tars2 threonyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 2:183,293,095...183,310,210
Ensembl chr 2:183,293,097...183,310,184
JBrowse link
G Tars3 threonyl-tRNA synthetase 3 IEA KEGG rno:00970 NCBI chr 1:119,213,189...119,265,492
Ensembl chr 1:119,213,213...119,265,488
JBrowse link
G Vars1 valyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr20:3,805,774...3,820,468
Ensembl chr20:3,805,776...3,820,298
JBrowse link
G Vars2 valyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr20:3,077,132...3,087,994
Ensembl chr20:3,077,132...3,087,994
JBrowse link
G Wars1 tryptophanyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 6:127,776,088...127,807,273
Ensembl chr 6:127,776,090...127,807,269
JBrowse link
G Wars2 tryptophanyl tRNA synthetase 2 (mitochondrial) IEA KEGG rno:00970 NCBI chr 2:186,459,744...186,543,581
Ensembl chr 2:186,459,444...186,543,571
JBrowse link
G Yars1 tyrosyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 5:141,535,815...141,564,029
Ensembl chr 5:141,535,759...141,563,833
JBrowse link
G Yars2 tyrosyl-tRNA synthetase 2 IEA KEGG rno:00970 NCBI chr11:84,632,350...84,638,138
Ensembl chr11:84,624,369...84,638,125
JBrowse link
ribosome biogenesis pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700009N14Rikl RIKEN cDNA 1700009N14 gene like IEA KEGG rno:03008 NCBI chr 5:54,456,005...54,457,381
Ensembl chr 5:54,455,893...54,457,677
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A IEA KEGG rno:03008 NCBI chr 2:120,306,417...120,497,707
Ensembl chr 2:120,306,412...120,497,705
JBrowse link
G Bms1 BMS1 ribosome biogenesis factor IEA
ISO
KEGG
RGD
PMID:24550520 rno:03008, RGD:9999445 NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127
JBrowse link
G Bop1 BOP1 ribosomal biogenesis factor ISO RGD PMID:25346433 PMID:23439679 RGD:9999448, RGD:9999449 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G Bysl bystin-like ISO RGD PMID:25346433 PMID:24424021 PMID:23439679 RGD:9999448, RGD:10002751, RGD:9999449 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G C1d C1D nuclear receptor corepressor ISO RGD PMID:25346433 RGD:9999448 NCBI chr14:91,660,951...91,673,177
Ensembl chr14:91,660,989...91,672,852
JBrowse link
G Csnk1d casein kinase 1, delta ISO RGD PMID:24424021 RGD:10002751 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614
JBrowse link
G Csnk1e casein kinase 1, epsilon ISO RGD PMID:24424021 RGD:10002751 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEA KEGG rno:03008 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEA KEGG rno:03008 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
JBrowse link
G Csnk2b casein kinase 2 beta IEA KEGG rno:03008 NCBI chr20:3,700,363...3,705,331
Ensembl chr20:3,698,733...3,707,133
JBrowse link
G Ddx10 DEAD-box helicase 10 ISO RGD PMID:22922795 RGD:10002738 NCBI chr 8:53,488,656...53,643,373
Ensembl chr 8:53,488,656...53,643,373
JBrowse link
G Ddx18 DEAD-box helicase 18 ISO RGD PMID:22922795 RGD:10002738 NCBI chr13:32,729,697...32,743,161
Ensembl chr13:32,729,700...32,743,161
JBrowse link
G Ddx24 DEAD-box helicase 24 ISO RGD PMID:22922795 RGD:10002738 NCBI chr 6:122,564,767...122,582,032
Ensembl chr 6:122,564,767...122,581,927
JBrowse link
G Ddx56 DEAD-box helicase 56 ISO RGD PMID:22922795 RGD:10002738 NCBI chr14:81,112,008...81,122,331
Ensembl chr14:81,112,012...81,122,333
JBrowse link
G Dhx15 DEAH-box helicase 15 ISO RGD PMID:22922795 RGD:10002738 NCBI chr14:58,787,147...58,825,083
Ensembl chr14:58,787,127...58,825,088
JBrowse link
G Dhx37 DEAH-box helicase 37 ISO RGD PMID:22922795 RGD:10002738 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802
JBrowse link
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease ISO RGD PMID:25346433 RGD:9999448 NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451
G Efl1 elongation factor like GTPase 1 IEA KEGG rno:03008 NCBI chr 1:136,638,527...136,763,518
Ensembl chr 1:136,638,527...136,763,518
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 IEA
ISO
KEGG
RGD
PMID:19373251 rno:03008, RGD:10002774 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Emg1 EMG1 N1-specific pseudouridine methyltransferase IEA KEGG rno:03008 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540
JBrowse link
G Eri1 exoribonuclease 1 ISO RGD PMID:25346433 RGD:9999448 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
G Exosc10 exosome component 10 ISO RGD PMID:24550520 RGD:9999445 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Exosc5 exosome component 5 ISO RGD PMID:24550520 RGD:9999445 NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265
JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742
JBrowse link
G Fbl fibrillarin IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932
JBrowse link
G Fbll1 fibrillarin-like 1 IEA KEGG rno:03008 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299
JBrowse link
G Fcf1 Fcf1 rRNA-processing protein ISO RGD PMID:24550520 RGD:9999445 NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
JBrowse link
G Gar1 GAR1 ribonucleoprotein IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451 NCBI chr 2:218,375,231...218,382,509
Ensembl chr 2:218,375,353...218,382,524
JBrowse link
G Gnl2 G protein nucleolar 2 IEA
ISO
KEGG
RGD
PMID:24240281 rno:03008, RGD:10002740 NCBI chr 5:137,293,141...137,318,528
Ensembl chr 5:137,293,081...137,318,526
JBrowse link
G Gnl3 G protein nucleolar 3 IEA KEGG rno:03008 NCBI chr16:6,207,402...6,213,491
Ensembl chr16:6,207,402...6,213,392
JBrowse link
G Gnl3l G protein nucleolar 3 like IEA KEGG rno:03008 NCBI chr  X:19,961,277...19,994,454
Ensembl chr  X:19,958,603...19,994,508
JBrowse link
G Gtpbp4 GTP binding protein 4 IEA KEGG rno:03008 NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009
JBrowse link
G Heatr1 HEAT repeat containing 1 IEA KEGG rno:03008 NCBI chr17:58,053,288...58,093,895
Ensembl chr17:58,051,700...58,093,948
JBrowse link
G Imp3 IMP U3 small nucleolar ribonucleoprotein 3 IEA
ISO
KEGG
RGD
PMID:24550520 rno:03008, RGD:9999445 NCBI chr 8:57,339,528...57,340,416
Ensembl chr 8:57,339,496...57,340,414
JBrowse link
G Imp4 IMP U3 small nucleolar ribonucleoprotein 4 IEA
ISO
KEGG
RGD
PMID:24550520 rno:03008, RGD:9999445 NCBI chr 9:36,654,127...36,659,265
Ensembl chr 9:36,654,401...36,660,075
JBrowse link
G Lsg1 large 60S subunit nuclear export GTPase 1 IEA KEGG rno:03008 NCBI chr11:70,132,919...70,168,526
Ensembl chr11:70,143,847...70,168,518
JBrowse link
G Ltv1 LTV1 ribosome biogenesis factor ISO RGD PMID:20137954 PMID:24424021 RGD:10002748, RGD:10002751 NCBI chr 1:7,565,673...7,578,398
Ensembl chr 1:7,565,669...7,578,563
JBrowse link
G Mdn1 midasin AAA ATPase 1 IEA
ISO
KEGG
RGD
PMID:21763358 rno:03008, RGD:10002739 NCBI chr 5:47,055,435...47,190,426
Ensembl chr 5:47,055,447...47,186,332
JBrowse link
G Mphosph10 M-phase phosphoprotein 10 IEA
ISO
KEGG
RGD
PMID:24550520 rno:03008, RGD:9999445 NCBI chr 1:117,948,134...117,964,149
Ensembl chr 1:117,948,134...117,964,149
JBrowse link
G Mtrex Mtr4 exosome RNA helicase ISO RGD PMID:24550520 RGD:9999445 NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627
JBrowse link
G Nhp2 NHP2 ribonucleoprotein IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451 NCBI chr10:35,877,057...35,880,399
Ensembl chr10:35,877,054...35,882,545
JBrowse link
G Nmd3 NMD3 ribosome export adaptor IEA
ISO
KEGG
RGD
PMID:20137954 PMID:17509569 rno:03008, RGD:10002748, RGD:10002749 NCBI chr 2:154,012,973...154,038,466
Ensembl chr 2:154,013,020...154,039,259
JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog IEA
ISO
KEGG
RGD
PMID:24424021 PMID:25346433 PMID:23439679 rno:03008, RGD:10002751, RGD:9999448, RGD:9999449 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815
JBrowse link
G Nol12 nucleolar protein 12 ISO RGD PMID:25346433 PMID:23439679 RGD:9999448, RGD:9999449 NCBI chr 7:110,493,294...110,498,908
Ensembl chr 7:110,493,246...110,498,907
JBrowse link
G Nop10 NOP10 ribonucleoprotein IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451 NCBI chr 3:99,066,857...99,067,942
Ensembl chr 3:99,066,857...99,067,942
JBrowse link
G Nop56 NOP56 ribonucleoprotein IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451 NCBI chr 3:117,476,963...117,481,847
Ensembl chr 3:117,477,053...117,481,841
JBrowse link
G Nop58 NOP58 ribonucleoprotein IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451 NCBI chr 9:61,120,939...61,144,810
Ensembl chr 9:61,120,929...61,144,810
JBrowse link
G Nup214 nucleoporin 214 ISO RGD PMID:17509569 RGD:10002749 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568
JBrowse link
G Nup88 nucleoporin 88 ISO RGD PMID:17509569 RGD:10002749 NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257
JBrowse link
G Nvl nuclear VCP-like IEA KEGG rno:03008 NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049
JBrowse link
G Nxf1 nuclear RNA export factor 1 IEA KEGG rno:03008 NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636
JBrowse link
G Nxf3 nuclear RNA export factor 3 IEA KEGG rno:03008 NCBI chr  X:99,025,901...99,050,409
Ensembl chr  X:99,025,901...99,039,261
JBrowse link
G Nxf7 nuclear RNA export factor 7 IEA KEGG rno:03008 NCBI chr  X:98,535,374...98,552,562
Ensembl chr  X:98,535,375...98,552,526
JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 IEA KEGG rno:03008 NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907
JBrowse link
G Nxt2 nuclear transport factor 2-like export factor 2 IEA KEGG rno:03008 NCBI chr  X:105,855,616...105,862,902
Ensembl chr  X:105,855,608...105,862,899
JBrowse link
G Pals2 protein associated with LIN7 2, MAGUK p55 family member ISO RGD PMID:25346433 RGD:9999448 NCBI chr 4:79,173,488...79,257,542
Ensembl chr 4:79,124,806...79,254,140
JBrowse link
G Pdcd11 programmed cell death 11 ISO RGD PMID:23439679 RGD:9999449 NCBI chr 1:245,980,840...246,021,999
Ensembl chr 1:245,980,880...246,021,999
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 ISO RGD PMID:25346433 RGD:9999448 NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
JBrowse link
G Pno1 partner of NOB1 homolog ISO RGD PMID:24424021 RGD:10002751 NCBI chr14:91,609,711...91,618,280
Ensembl chr14:91,609,233...91,618,324
JBrowse link
G Pop1 POP1 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141
JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443
JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336
JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674
JBrowse link
G Prkcb protein kinase C, beta ISO RGD PMID:19373251 RGD:10002774 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Pwp2 PWP2, small subunit processome component IEA KEGG rno:03008 NCBI chr20:10,499,332...10,512,965
Ensembl chr20:10,499,363...10,513,640
JBrowse link
G Rack1 receptor for activated C kinase 1 ISO RGD PMID:19373251 RGD:10002774 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975
JBrowse link
G Ran RAN, member RAS oncogene family IEA
ISO
KEGG
RGD
PMID:17509569 rno:03008, RGD:10002749 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
JBrowse link
G Rasl2-9 RAS-like, family 2, locus 9 IEA KEGG rno:03008 NCBI chr 1:68,720,879...68,734,930
Ensembl chr 1:68,720,879...68,722,057
JBrowse link
G Rbm28 RNA binding motif protein 28 IEA
ISO
KEGG
RGD
PMID:23439679 rno:03008, RGD:9999449 NCBI chr 4:57,722,946...57,761,935
Ensembl chr 4:57,722,223...57,761,653
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 IEA
ISO
KEGG
RGD
PMID:24550520 rno:03008, RGD:9999445 NCBI chr 1:226,824,561...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Rexo1 RNA exonuclease 1 homolog IEA KEGG rno:03008 NCBI chr 7:9,154,050...9,174,035
Ensembl chr 7:9,154,061...9,173,454
JBrowse link
G Rexo1l1-ps1 REX1, RNA exonuclease 1 homolog-like 1, pseudogene 1 IEA KEGG rno:03008 NCBI chr 2:138,834,049...138,838,838
Ensembl chr 2:138,834,559...138,837,083
JBrowse link
G Rexo2 RNA exonuclease 2 IEA KEGG rno:03008 NCBI chr 8:48,811,900...48,823,622
Ensembl chr 8:48,811,900...48,823,622
JBrowse link
G Rexo5 RNA exonuclease 5 IEA KEGG rno:03008 NCBI chr 1:174,168,633...174,264,526
Ensembl chr 1:174,168,694...174,241,486
JBrowse link
G Riok1 RIO kinase 1 IEA
ISO
KEGG
RGD
PMID:24424021 rno:03008, RGD:10002751 NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900
JBrowse link
G Riok2 RIO kinase 2 IEA
ISO
KEGG
RGD
PMID:24424021 rno:03008, RGD:10002751 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
JBrowse link
G Riok3 RIO kinase 3 ISO RGD PMID:24424021 RGD:10002751 NCBI chr18:3,327,776...3,353,350
Ensembl chr18:3,327,776...3,353,343
JBrowse link
G Rpl10 ribosomal protein L10 ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:152,054,562...152,056,769
Ensembl chr  X:152,054,452...152,056,761
JBrowse link
G Rpl10a ribosomal protein L10A ISO RGD PMID:23636399 RGD:10002762 NCBI chr20:6,388,800...6,391,358
Ensembl chr20:6,385,823...6,391,357
JBrowse link
G Rpl11 ribosomal protein L11 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rpl12 ribosomal protein L12 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:16,264,269...16,266,645
Ensembl chr 3:16,264,251...16,266,642
JBrowse link
G Rpl13 ribosomal protein L13 ISO RGD PMID:23636399 RGD:10002762 NCBI chr19:51,153,990...51,156,541
Ensembl chr19:51,153,924...51,163,014
JBrowse link
G Rpl13a ribosomal protein L13A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
G Rpl14 ribosomal protein L14 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:120,286,035...120,289,160
Ensembl chr 8:120,284,645...120,289,064
JBrowse link
G Rpl15 ribosomal protein L15 ISO RGD PMID:25346433 PMID:23636399 RGD:9999448, RGD:10002762 NCBI chr15:7,503,883...7,507,166
Ensembl chr15:7,503,883...7,507,165
JBrowse link
G Rpl17 ribosomal protein L17 ISO RGD PMID:23636399 RGD:10002762 NCBI chr18:68,581,141...68,584,253
Ensembl chr18:68,581,098...68,584,253
JBrowse link
G Rpl18 ribosomal protein L18 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:96,188,811...96,191,452
Ensembl chr 1:96,188,112...96,191,452
JBrowse link
G Rpl18a ribosomal protein L18A ISO RGD PMID:23636399 RGD:10002762 NCBI chr16:18,542,555...18,544,578
Ensembl chr16:18,542,566...18,545,546
JBrowse link
G Rpl19 ribosomal protein L19 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:83,022,503...83,026,030
Ensembl chr10:83,019,257...83,052,112
JBrowse link
G Rpl21 ribosomal protein L21 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:8,268,641...8,272,278
Ensembl chr12:8,267,196...8,272,281
Ensembl chr 3:8,267,196...8,272,281
Ensembl chr13:8,267,196...8,272,281
JBrowse link
G Rpl22 ribosomal protein L22 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:162,835,241...162,843,394
Ensembl chr 5:162,833,740...162,843,368
Ensembl chr 7:162,833,740...162,843,368
Ensembl chr 4:162,833,740...162,843,368
JBrowse link
G Rpl23 ribosomal protein L23 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870
JBrowse link
G Rpl23a ribosomal protein L23A ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:63,076,660...63,079,346
Ensembl chr10:63,076,066...63,079,346
JBrowse link
G Rpl24 ribosomal protein L24 ISO RGD PMID:23636399 RGD:10002762 NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370
JBrowse link
G Rpl26 ribosomal protein L26 ISO RGD PMID:25346433 PMID:23636399 RGD:9999448, RGD:10002762 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Rpl27 ribosomal protein L27 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:86,375,511...86,379,210
Ensembl chr10:86,375,454...86,379,193
JBrowse link
G Rpl27a ribosomal protein L27A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:163,539,732...163,542,771 JBrowse link
G Rpl28 ribosomal protein L28 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:69,052,148...69,054,735
Ensembl chr 1:69,053,203...69,055,032
JBrowse link
G Rpl29 ribosomal protein L29 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:107,068,929...107,070,963
Ensembl chr 8:107,068,480...107,070,914
JBrowse link
G Rpl3 ribosomal protein L3 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:111,622,255...111,627,640
Ensembl chr 7:111,621,610...111,636,468
JBrowse link
G Rpl30 ribosomal protein L30 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:65,648,266...65,651,401
Ensembl chr 7:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
JBrowse link
G Rpl31 ribosomal protein L31 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:41,647,397...41,651,441
Ensembl chr 9:41,647,426...41,662,129
JBrowse link
G Rpl32 ribosomal protein L32 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 4:148,864,048...148,867,612
Ensembl chr 4:148,864,044...148,867,612
JBrowse link
G Rpl34 ribosomal protein L34 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:219,284,373...219,288,108
Ensembl chr 2:219,284,382...219,288,111
JBrowse link
G Rpl35 ribosomal protein L35 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:22,753,255...22,756,217
Ensembl chr 3:22,753,253...22,756,243
JBrowse link
G Rpl35a ribosomal protein L35A ISO RGD PMID:23636399 RGD:10002762 NCBI chr11:67,726,031...67,729,953
Ensembl chr11:67,726,032...67,729,942
Ensembl chr 5:67,726,032...67,729,942
JBrowse link
G Rpl36 ribosomal protein L36 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:1,441,986...1,447,397
Ensembl chr 6:98,809,534...98,809,897
JBrowse link
G Rpl36a ribosomal protein L36A ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:97,766,179...97,768,892
Ensembl chr  X:97,766,179...97,768,892
JBrowse link
G Rpl37 ribosomal protein L37 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:54,215,469...54,217,429
Ensembl chr 2:54,215,469...54,217,442
JBrowse link
G Rpl37a ribosomal protein L37A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:74,298,843...74,300,926 JBrowse link
G Rpl37l1 ribosomal protein L37-like 1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:61,033,799...61,034,157
Ensembl chr10:61,033,797...61,034,168
Ensembl chr 9:61,033,797...61,034,168
JBrowse link
G Rpl38 ribosomal protein L38 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004
Ensembl chr14:99,701,362...99,705,004
Ensembl chr 3:99,701,362...99,705,004
Ensembl chr 2:99,701,362...99,705,004
Ensembl chr16:99,701,362...99,705,004
JBrowse link
G Rpl39 ribosomal protein L39 ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:116,327,216...116,330,211
Ensembl chr18:6,326,330...6,326,692
Ensembl chr  X:6,326,330...6,326,692
JBrowse link
G Rpl4 ribosomal protein L4 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
JBrowse link
G Rpl5 ribosomal protein L5 ISO RGD PMID:23636399 RGD:10002762 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rpl6 ribosomal protein L6 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:35,347,493...35,352,011
Ensembl chr12:35,347,497...35,351,921
JBrowse link
G Rpl7 ribosomal protein L7 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rpl7a ribosomal protein L7A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:10,239,026...10,241,703
Ensembl chr 3:10,239,001...10,241,716
JBrowse link
G Rpl8 ribosomal protein L8 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:108,626,194...108,628,485
Ensembl chr 7:108,622,324...108,628,482
Ensembl chr 3:108,622,324...108,628,482
JBrowse link
G Rpl9 ribosomal protein L9 ISO RGD PMID:23636399 RGD:10002762 NCBI chr14:42,893,945...42,897,140
Ensembl chr14:42,893,942...42,897,136
Ensembl chr 3:42,893,942...42,897,136
JBrowse link
G Rplp0 ribosomal protein lateral stalk subunit P0 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:41,054,363...41,057,632
Ensembl chr12:41,054,179...41,057,632
JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:62,394,008...62,395,341
Ensembl chr 8:62,393,177...62,395,339
JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:196,546,086...196,548,636
Ensembl chr 1:196,546,352...196,548,645
JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 IEA KEGG rno:03008 NCBI chr 8:57,907,352...57,908,732
Ensembl chr 8:57,907,352...57,908,732
JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 IEA KEGG rno:03008 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952
JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 IEA KEGG rno:03008 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431
JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 IEA KEGG rno:03008 NCBI chr17:28,947,752...28,956,788
Ensembl chr17:28,947,734...28,956,788
JBrowse link
G Rps10 ribosomal protein S10 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr20:5,694,313...5,698,922
Ensembl chr20:5,694,313...5,699,044
Ensembl chr 6:5,694,313...5,699,044
JBrowse link
G Rps11 ribosomal protein S11 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:95,605,690...95,607,798
Ensembl chr 1:95,605,692...95,607,874
JBrowse link
G Rps12 ribosomal protein S12 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:21,680,854...21,683,010
Ensembl chr 1:21,680,852...21,683,014
JBrowse link
G Rps13 ribosomal protein S13 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355
JBrowse link
G Rps14 ribosomal protein S14 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166
JBrowse link
G Rps15 ribosomal protein S15 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
JBrowse link
G Rps15a ribosomal protein S15a ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:172,420,151...172,427,021
Ensembl chr 1:172,419,761...172,426,995
JBrowse link
G Rps16 ribosomal protein S16 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
JBrowse link
G Rps17 ribosomal protein S17 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 1:135,295,920...135,298,506
Ensembl chr 1:135,295,919...135,298,535
Ensembl chr 8:135,295,919...135,298,535
JBrowse link
G Rps18 ribosomal protein S18 ISO RGD PMID:25346433 PMID:20819938 PMID:23636399 RGD:9999448, RGD:10002730, RGD:10002762 NCBI chr20:4,931,427...4,935,538
Ensembl chr10:101,204,500...101,205,146
Ensembl chr20:101,204,500...101,205,146
JBrowse link
G Rps19 ribosomal protein S19 ISO RGD PMID:25346433 PMID:23636399 PMID:20819938 PMID:23439679 RGD:9999448, RGD:10002762, RGD:10002730, RGD:9999449 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G Rps2 ribosomal protein S2 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr10:13,747,316...13,749,165
Ensembl chr10:13,747,301...13,749,163
JBrowse link
G Rps20 ribosomal protein S20 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 5:16,819,095...16,820,476
Ensembl chr 5:16,819,304...16,820,475
Ensembl chr 9:16,819,304...16,820,475
Ensembl chr 3:16,819,304...16,820,475
JBrowse link
G Rps21 ribosomal protein S21 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
JBrowse link
G Rps21-ps1 ribosomal protein S21, pseudogene 1 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 5:153,387,133...153,387,476
Ensembl chr 5:153,387,176...153,387,427
JBrowse link
G Rps23 ribosomal protein S23 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 2:22,079,339...22,080,909
Ensembl chr 2:22,079,302...22,080,918
JBrowse link
G Rps24 ribosomal protein S24 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr16:89,538...94,267
Ensembl chr16:89,604...94,279
JBrowse link
G Rps25 ribosomal protein s25 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 8:44,733,623...44,735,999
Ensembl chr 8:44,733,029...44,737,271
JBrowse link
G Rps26 ribosomal protein S26 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 7:1,057,332...1,058,882 JBrowse link
G Rps27 ribosomal protein S27 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 2:175,665,858...175,666,963
Ensembl chr 2:175,665,853...175,666,964
JBrowse link
G Rps27a ribosomal protein S27a ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr14:103,285,734...103,288,011
Ensembl chr14:103,285,734...103,288,011
Ensembl chr 5:103,285,734...103,288,011
JBrowse link
G Rps27l ribosomal protein S27-like ISO RGD PMID:20819938 RGD:10002730 NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418
JBrowse link
G Rps28 ribosomal protein S28 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
Ensembl chr16:14,607,801...14,609,170
JBrowse link
G Rps29 ribosomal protein S29 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 6:87,635,229...87,636,627
Ensembl chr 6:87,635,230...87,636,636
JBrowse link
G Rps3 ribosomal protein S3 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680
JBrowse link
G Rps3a ribosomal protein S3a ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 2:171,524,685...171,529,054
Ensembl chr 2:171,524,500...171,529,055
JBrowse link
G Rps4x ribosomal protein S4, X-linked ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr  X:67,298,522...67,302,965
Ensembl chr  X:67,298,525...67,303,019
Ensembl chr 4:67,298,525...67,303,019
JBrowse link
G Rps4y2 ribosomal protein S4, Y-linked 2 ISO RGD PMID:20819938 RGD:10002730 NCBI chr 4:181,269,507...181,270,440
Ensembl chr 4:181,269,081...181,270,349
JBrowse link
G Rps5 ribosomal protein S5 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:73,538,776...73,543,073
Ensembl chr 1:73,538,776...73,543,073
JBrowse link
G Rps6 ribosomal protein S6 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602
JBrowse link
G Rps7 ribosomal protein S7 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145
JBrowse link
G Rps8 ribosomal protein S8 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 5:130,630,362...130,632,932
Ensembl chr 5:130,629,716...130,633,268
JBrowse link
G Rps9 ribosomal protein S9 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 1:65,511,723...65,515,076
Ensembl chr 1:65,511,723...65,515,123
JBrowse link
G Rpsa ribosomal protein SA ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247
JBrowse link
G Rrp12 ribosomal RNA processing 12 ISO RGD PMID:24424021 RGD:10002751 NCBI chr 1:240,672,378...240,705,992
Ensembl chr 1:240,672,382...240,706,018
JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A IEA KEGG rno:03008 NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817
JBrowse link
G Sbds Sbds, ribosome maturation factor IEA KEGG rno:03008 NCBI chr12:26,420,410...26,429,650
Ensembl chr12:26,420,414...26,429,649
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 IEA
ISO
KEGG
RGD
PMID:22065625 rno:03008, RGD:9999451 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872
JBrowse link
G Snu13l1 small nuclear ribonucleoprotein 13 like 1 IEA KEGG rno:03008 NCBI chr  X:150,624,087...150,624,525
Ensembl chr  X:150,624,087...150,624,473
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 IEA KEGG rno:03008 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
JBrowse link
G Tbl3 transducin (beta)-like 3 IEA KEGG rno:03008 NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 IEA KEGG rno:03008 NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324
JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr16:18,918,614...18,920,807
Ensembl chr16:18,900,616...18,920,807
JBrowse link
G Utp14a UTP14A small subunit processome component IEA KEGG rno:03008 NCBI chr  X:127,439,282...127,464,634
Ensembl chr  X:127,439,268...127,464,633
JBrowse link
G Utp15 UTP15, small subunit processome component IEA KEGG rno:03008 NCBI chr 2:29,594,405...29,612,819
Ensembl chr 2:29,594,941...29,612,773
JBrowse link
G Utp18 UTP18 small subunit processome component IEA KEGG rno:03008 NCBI chr10:78,811,879...78,839,338
Ensembl chr10:78,811,880...78,839,627
JBrowse link
G Utp23 UTP23, small subunit processome component ISO RGD PMID:24550520 RGD:9999445 NCBI chr 7:83,185,187...83,196,652
Ensembl chr 7:83,189,656...83,196,655
JBrowse link
G Utp4 UTP4 small subunit processome component IEA KEGG rno:03008 NCBI chr19:34,790,962...34,820,558
Ensembl chr19:34,792,457...34,820,550
JBrowse link
G Utp6 UTP6 small subunit processome component IEA KEGG rno:03008 NCBI chr10:64,897,321...64,927,997
Ensembl chr10:64,897,328...64,927,997
JBrowse link
G Wdr3 WD repeat domain 3 IEA
ISO
KEGG
RGD
PMID:24550520 rno:03008, RGD:9999445 NCBI chr 2:187,505,816...187,528,432
Ensembl chr 2:187,505,816...187,528,432
JBrowse link
G Wdr43 WD repeat domain 43 IEA KEGG rno:03008 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846
JBrowse link
G Wdr75 WD repeat domain 75 IEA KEGG rno:03008 NCBI chr 9:47,903,214...47,933,399
Ensembl chr 9:47,903,200...47,933,399
JBrowse link
G Xpo1 exportin 1 IEA
ISO
KEGG
RGD
PMID:25802992 PMID:17509569 rno:03008, RGD:10002750, RGD:10002749 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498
JBrowse link
G Xpo5 exportin 5 ISO RGD PMID:25802992 RGD:10002750 NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:14,740,182...14,778,171
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 IEA KEGG rno:03008 NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEA
ISO
KEGG
RGD
PMID:24550520 rno:03008, RGD:9999445 NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306
JBrowse link
translation elongation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 ISO RGD PMID:23746255 PMID:25514765 RGD:10044024, RGD:10044025 NCBI chr 8:79,341,554...79,344,784
Ensembl chr 8:79,341,557...79,344,839
JBrowse link
G Eef1b2 eukaryotic translation elongation factor 1 beta 2 ISO RGD PMID:22751155 RGD:10044026 NCBI chr 9:64,580,163...64,582,737
Ensembl chr 9:64,579,893...64,582,737
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO RGD PMID:23746255 PMID:25514765 RGD:10044024, RGD:10044025 NCBI chr 7:8,533,248...8,538,518
Ensembl chr 7:8,533,116...8,559,183
JBrowse link
translation initiation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx29 DExH-box helicase 29 ISO RGD PMID:21427765 RGD:10044021 NCBI chr 2:44,560,653...44,611,450
Ensembl chr 2:44,560,714...44,611,445
JBrowse link
G Eif1 eukaryotic translation initiation factor 1 ISO RGD PMID:24499181 RGD:10002776 NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327
JBrowse link
G Eif1a eukaryotic translation initiation factor 1A ISO RGD PMID:24499181 RGD:10002776 NCBI chr18:39,325,695...39,338,043
Ensembl chr18:39,325,202...39,338,696
JBrowse link
G Eif1ax eukaryotic translation initiation factor 1A, X-linked ISO RGD PMID:24499181 RGD:10002776 NCBI chr  X:35,498,698...35,513,402
Ensembl chr  X:35,498,517...35,513,335
JBrowse link
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha ISO RGD PMID:22815232 RGD:10044017 NCBI chr12:32,025,593...32,033,848
Ensembl chr12:32,025,557...32,046,601
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta ISO RGD PMID:22815232 RGD:10044017 NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma ISO RGD PMID:22815232 RGD:10044017 NCBI chr 5:130,492,167...130,558,692
Ensembl chr 5:130,492,220...130,563,332
JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta ISO RGD PMID:22815232 RGD:10044017 NCBI chr 6:25,183,177...25,188,832
Ensembl chr 6:25,183,186...25,188,829
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ISO RGD PMID:22815232 RGD:10044017 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ISO RGD PMID:24499181 PMID:22815232 RGD:10002776, RGD:10044017 NCBI chr 6:97,672,829...97,697,499
Ensembl chr 6:97,672,766...97,706,225
JBrowse link
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta ISO RGD PMID:24499181 PMID:22815232 RGD:10002776, RGD:10044017 NCBI chr 3:143,374,652...143,395,460
Ensembl chr 3:143,373,686...143,395,432
JBrowse link
G Eif2s3 eukaryotic translation initiation factor 2 subunit gamma ISO RGD PMID:22815232 PMID:24499181 RGD:10002776 RGD:10044017 NCBI chr  X:58,916,513...58,939,923
Ensembl chr  X:58,917,490...58,940,686
JBrowse link
G Eif3a eukaryotic translation initiation factor 3, subunit A ISO RGD PMID:24499181 RGD:10002776 NCBI chr 1:259,902,767...259,932,976
Ensembl chr 1:259,902,680...259,932,976
JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B ISO RGD PMID:24499181 RGD:10002776 NCBI chr12:14,196,403...14,220,865
Ensembl chr12:14,196,403...14,220,886
JBrowse link
G Eif3c eukaryotic translation initiation factor 3, subunit C ISO RGD PMID:24499181 RGD:10002776 NCBI chr 1:181,134,604...181,152,489
Ensembl chr 1:181,134,604...181,152,493
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D ISO RGD PMID:24499181 RGD:10002776 NCBI chr 7:109,539,795...109,552,184
Ensembl chr 7:109,539,356...109,552,206
JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E ISO RGD PMID:24499181 RGD:10002776 NCBI chr 7:74,339,848...74,372,483
Ensembl chr 7:74,339,828...74,373,096
JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F ISO RGD PMID:24499181 RGD:10002776 NCBI chr 1:162,934,220...162,943,204
Ensembl chr 1:162,934,212...162,943,204
JBrowse link
G Eif3g eukaryotic translation initiation factor 3, subunit G ISO RGD PMID:24499181 RGD:10002776 NCBI chr 8:19,429,728...19,433,760
Ensembl chr 8:19,429,643...19,433,808
JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H ISO RGD PMID:24499181 RGD:10002776 NCBI chr 7:83,091,037...83,174,451
Ensembl chr 7:83,091,039...83,174,451
JBrowse link
G Eif3i eukaryotic translation initiation factor 3, subunit I ISO RGD PMID:24499181 RGD:10002776 NCBI chr 5:141,935,135...141,942,589
Ensembl chr 5:141,935,044...141,942,676
JBrowse link
G Eif3j eukaryotic translation initiation factor 3, subunit J ISO RGD PMID:24499181 RGD:10002776 NCBI chr 3:108,985,103...109,007,341
Ensembl chr 3:108,985,118...109,007,953
JBrowse link
G Eif3k eukaryotic translation initiation factor 3, subunit K ISO RGD PMID:24499181 RGD:10002776 NCBI chr 1:84,260,127...84,270,051
Ensembl chr 1:84,259,673...84,270,302
JBrowse link
G Eif3l eukaryotic translation initiation factor 3, subunit L ISO RGD PMID:24499181 RGD:10002776 NCBI chr 7:110,652,565...110,663,614
Ensembl chr 7:110,627,107...110,663,614
JBrowse link
G Eif3m eukaryotic translation initiation factor 3, subunit M ISO RGD PMID:24499181 RGD:10002776 NCBI chr 3:91,424,754...91,442,358
Ensembl chr 3:91,416,325...91,442,392
JBrowse link
G Eif4a1 eukaryotic translation initiation factor 4A1 ISO RGD PMID:24450646 PMID:21427765 RGD:10044020, RGD:10044021 NCBI chr10:54,384,345...54,389,855
Ensembl chr10:54,384,347...54,389,858
JBrowse link
G Eif4a2 eukaryotic translation initiation factor 4A2 ISO RGD PMID:24450646 PMID:21427765 RGD:10044020, RGD:10044021 NCBI chr11:77,764,126...77,770,810
Ensembl chr11:77,764,124...77,770,781
JBrowse link
G Eif4b eukaryotic translation initiation factor 4B ISO RGD PMID:21427765 RGD:10044021 NCBI chr 7:133,206,637...133,228,436 JBrowse link
G Eif4e eukaryotic translation initiation factor 4E ISO RGD PMID:24499181 RGD:10002776 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ISO RGD PMID:22815232 PMID:24499181 RGD:10002776 RGD:10044017 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 ISO RGD PMID:24499181 PMID:22815232 RGD:10002776, RGD:10044017 NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
JBrowse link
G Eif4h eukaryotic translation initiation factor 4H ISO RGD PMID:21427765 RGD:10044021 NCBI chr12:22,083,155...22,099,876
Ensembl chr12:22,082,835...22,099,876
JBrowse link
G Eif5 eukaryotic translation initiation factor 5 IDA RGD PMID:8464924 RGD:728212 NCBI chr 6:130,589,162...130,597,656
Ensembl chr 6:130,589,143...130,597,656
JBrowse link
G Eif5b eukaryotic translation initiation factor 5B ISO RGD PMID:24499181 RGD:10002776 NCBI chr 9:40,222,769...40,277,482
Ensembl chr 9:40,222,898...40,277,482
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 ISO RGD PMID:24499181 PMID:22815232 RGD:10002776, RGD:10044017 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
translation termination pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abce1 ATP binding cassette subfamily E member 1 ISO RGD PMID:23031510 PMID:23091275 RGD:10044034, RGD:10044036 NCBI chr19:28,205,566...28,230,489
Ensembl chr19:28,205,555...28,230,489
JBrowse link
G Etf1 eukaryotic translation termination factor 1 ISO RGD PMID:22751155 RGD:10044026 NCBI chr18:26,502,413...26,530,753
Ensembl chr18:26,504,080...26,530,810
JBrowse link
G Gspt1 G1 to S phase transition 1 ISO RGD PMID:22751155 RGD:10044026 NCBI chr10:4,362,528...4,397,215
Ensembl chr10:4,362,510...4,397,198
JBrowse link
G Hbs1l HBS1-like translational GTPase ISO RGD PMID:23031510 RGD:10044034 NCBI chr 1:16,092,529...16,170,082
Ensembl chr 1:16,092,547...16,170,074
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor ISO RGD PMID:23031510 RGD:10044034 NCBI chr 2:46,797,853...46,799,621
Ensembl chr 2:46,797,853...46,799,746
JBrowse link

Pathway Gene Annotations

Disease Annotations Associated with Genes in the translation pathway
Disease TermsGene Symbols
16Q24.3 Microdeletion SyndromeRpl13
3-hydroxy-3-methylglutaryl-CoA lyase deficiencyRpl11
3-methylglutaconic aciduria type 7bRps3
adenylosuccinase lyase deficiencyRpl3
adrenoleukodystrophyRpl10
agammaglobulinemia 3Rps19
alcohol use disorderRpl18a
anemiaRpl11 , Rps26
Animal Disease ModelsRpl10a , Rpl13a , Rpl27a , Rpl36a , Rpsa
Animal Mammary NeoplasmsRpl3 , Rpl6 , Rps14
aplastic anemiaRpl5
arrhythmogenic right ventricular dysplasia 5Rpsa
atrial fibrillationRps2
autistic disorderRpl10 , Rpl17 , Rpl36a , Rpl39 , Rps28 , Rps4x
autosomal dominant intellectual developmental disorder 5Rps18
autosomal recessive chronic granulomatous disease 4Rpl13
Bardet-Biedl syndromeFau
Barth syndromeRpl10
bladder exstrophy-epispadias-cloacal exstrophy complexRpl4
Bloom syndromeRpl4 , Rplp1 , Rps17
bone marrow diseaseRps26
brachycephaly, trichomegaly, and developmental delayRps23
Brain InjuriesRps27a , Uba52
Brain-Lung-Thyroid SyndromeRps29
Breast NeoplasmsRpl23a , Rpl31 , Rplp2 , Rps4x , Rps6 , Rps7 , Rps8
carcinomaRpl3 , Rpl6 , Rps14
Carpenter Syndrome 2Rps16 , Rps19
CD3epsilon deficiencyRps25
cerebellar ataxiaRpl27a
cerebral creatine deficiency syndromeRps15
cerebral creatine deficiency syndrome 1Rpl10
Chanarin-Dorfman syndromeRplp2
Charcot-Marie-Tooth disease dominant intermediate CRps8
Chromosomal InstabilityRps3
Chromosome 11, Partial Trisomy 11qRps25
chromosome 1p36 deletion syndromeRpl22
chromosome 5q deletion syndromeRps14
colon carcinomaUba52
colorectal cancerRpl4 , Rplp1 , Rps17
congenital hypoplastic anemiaRpl19 , Rpl26 , Rpl35a , Rpl5 , Rps10 , Rps16 , Rps19 , Rps24 , Rps7
craniosynostosisRps16 , Rps19
cyclic hematopoiesisRps15
delta beta-thalassemiaRplp2
developmental and epileptic encephalopathyRpl12 , Rplp2 , Rps21-ps1 , Rps8
developmental and epileptic encephalopathy 12Rpl13a , Rps11
developmental and epileptic encephalopathy 14Rpl7a
developmental and epileptic encephalopathy 31ARpl12
developmental and epileptic encephalopathy 33Rps21-ps1
developmental and epileptic encephalopathy 9Rpl36a
Diabetic NephropathiesUba52
Diamond-Blackfan anemiaRpl11 , Rpl19 , Rpl26 , Rpl35a , Rpl5 , Rps10 , Rps16 , Rps17 , Rps19 , Rps20 , Rps24 , Rps26 , Rps7 , Rpsa
Diamond-Blackfan anemia 1Rpl5 , Rps19
Diamond-Blackfan anemia 10Rps26
Diamond-Blackfan anemia 11Rpl26
Diamond-Blackfan anemia 12Rpl15
Diamond-Blackfan anemia 13Rps29
Diamond-Blackfan anemia 15 with mandibulofacial dysostosisRps26 , Rps28
Diamond-Blackfan anemia 16Rpl27
Diamond-Blackfan anemia 17Rps27
Diamond-Blackfan anemia 18Rpl18
Diamond-Blackfan anemia 19Rpl35
Diamond-Blackfan anemia 20Rps15a
Diamond-Blackfan anemia 3Rps24
Diamond-Blackfan anemia 4Rps17
Diamond-Blackfan anemia 5Rpl35a
Diamond-Blackfan anemia 6Rpl5
Diamond-Blackfan anemia 7Rpl11
Diamond-Blackfan anemia 8Rps7
Diamond-Blackfan anemia 9Rps10
Disease ProgressionRpl13 , Rpl15 , Rpl18 , Rps15 , Rps19 , Rps21-ps1 , Rps26 , Rps6
Down syndromeRplp0
DwarfismRps25
dyskeratosis congenitaRpl10 , Rpl26
early infantile epileptic encephalopathyRpl12 , Rplp2 , Rps21-ps1 , Rps8
Ehlers-Danlos syndrome classic type 1Rpl7a
Emery-Dreifuss muscular dystrophyRpl10
epilepsyRps2
Experimental Autoimmune MyocarditisRps6
Experimental Diabetes MellitusUba52
Experimental Mammary NeoplasmsRpl3 , Rpl6 , Rps14
Fabry diseaseRpl36a
familial adenomatous polyposis 1Rps14
Fanconi anemiaRpl13
favismRpl10
GAND syndromeRps27
gastrointestinal stromal tumorRpl24 , Rps27
genetic diseaseRpl10 , Rpl11 , Rpl13 , Rpl5 , Rps10 , Rps29
Genitopatellar SyndromeRps24
glioblastomaRpl35a , Rpl5
glycogen storage disease IbRps25
glycogen storage disease VFau
HemimegalencephalyRps6
hepatoblastomaRps19
hepatocellular carcinomaRps6
Hereditary Neoplastic SyndromesRps14 , Rps20
herpes simplexRpl30
high grade gliomaFau
High MyopiaRpl4
Hyperglycinemia, Lactic Acidosis, and SeizuresRpl9
HyperpigmentationRpl27a
HypertriglyceridemiaRps12
hypomyelinating leukodystrophy 7Rps24
hypotrichosisRpl21
hypotrichosis 12Rpl21
HypoxiaRps14 , Rps2
idiopathic generalized epilepsyRps2
immunodeficiency 17Rps25
immunodeficiency 18Rps25
immunodeficiency 19Rps25
immunodeficiency 33Rpl10
immunodeficiency 39Rplp2
immunodeficiency 42Rps27
inflammatory bowel disease 28Rps25
insulinomaRps15
intellectual disabilityFau , Rpl17 , Rps13 , Rps3
irritable bowel syndromeRpsa
isolated growth hormone deficiency type IIIRpl36a
isolated microphthalmia 5Rps25
KBG syndromeRpl13
Leigh diseaseRpl7a
leukocyte adhesion deficiency 3Fau
Li-Fraumeni syndromeRpl26
Liver FailureRps10 , Rps6 , Rps9
long QT syndrome 10Rps25
lung adenocarcinomaRpl10a , Rpl13a , Rpl27a , Rpl36a , Rpsa
lymphomaRpl11
Lynch syndromeRps20
maple syrup urine diseaseRps16 , Rps19
maturity-onset diabetes of the young type 1Rps16
Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1Rpl18a , Uba52
melanomaRps3
metachondromatosisRpl6
MHC class II deficiencyRps27
middle cerebral artery infarctionRpl28
mucolipidosis type IVRps28
Myocardial IschemiaRpl17
myoepitheliomaRpl36
Neoplasm InvasivenessRpsa
Neurodevelopmental DisordersRpl22 , Rpl37 , Rpl37a , Rps15 , Rps23
neuronal ceroid lipofuscinosisRpl4 , Rplp2 , Rps21-ps1
neutropeniaRps14
Noonan syndrome 1Rpl6
Noonan syndrome with multiple lentigines 1Rpl6
optic atrophyRpl24
otitis mediaRpl38
ovarian cystRpl5
pancytopeniaRpl27a
paraplegiaRpl10
parathyroid carcinomaRps27
Parkinson's diseaseRpl14 , Rpl23a , Rpl6 , Rps8
periventricular nodular heterotopiaRpl10
polycystic ovary syndromeRpl37a
primary ciliary dyskinesiaRps29
primary ciliary dyskinesia 33Rpl13
primary coenzyme Q10 deficiency 7Rpl7a
Prostatic NeoplasmsRpl10 , Rpl11 , Rpl12 , Rps19
proteasome-associated autoinflammatory syndrome 1Rpl10a , Rps10 , Rps18
Rafiq syndromeRpl7a
RASopathyRpl6 , Rps25
renal cell carcinomaRpl14
ROLANDIC EPILEPSY, INTELLECTUAL DISABILITY, AND SPEECH DYSPRAXIA, X-LINKEDRpl36a
schizophreniaRps19 , Rps25
sciatic neuropathyRpsa
Segawa Syndrome, Autosomal RecessiveRplp2
SepsisRpl4 , Rpl9
severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positiveRpl18a
Severe Combined Immunodeficiency, Autosomal Recessive, T Cell-Negative, B Cell-Positive, NK Cell-NegativeRpl18a
severe congenital encephalopathy due to MECP2 mutationRpl10
severe congenital neutropenia 2Rpl5
severe congenital neutropenia 3Rps27
severe congenital neutropenia 5Rps27
short-rib thoracic dysplasia 9 with or without polydactylyRps2
Spinal Cord InjuriesRpsa
Splenic HypoplasiaRpsa
SplenomegalyRpl10
spondyloepimetaphyseal dysplasiaRpl13
Spondyloepimetaphyseal Dysplasia, Isidor-Toutain TypeRpl13
Stomach NeoplasmsRpl13 , Rpl15 , Rpl18 , Rps15 , Rps19 , Rps21-ps1 , Rps26 , Rps6
syndromic X-linked intellectual disability 14Rpl39
syndromic X-linked intellectual disability 35Rpl10
syndromic X-linked intellectual disability Cabezas typeRpl39
syndromic X-linked intellectual disability Lubs typeRpl10 , Rpl36a , Rpl39 , Rps4x
systemic lupus erythematosusRpl12 , Rpl14
T-cell acute lymphoblastic leukemiaRpl10 , Rpl11 , Rpl5
Temporomandibular Joint OsteoarthritisRps6
transient cerebral ischemiaRps6
tuberous sclerosis 1Rpl7a
tuberous sclerosis 2Rps2
type 2 diabetes mellitusRps16
vascular dementiaRps6
Weight GainRpl28 , Rps28 , Rps8
Pathway Annotations Associated with Genes in the translation pathway

References Associated with the translation pathway:

Ontology Path Diagram:

paths to the root
paths to the root

Import into Pathway Studio: