SPP1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 32 | 11,354,070 - 11,362,325 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 11,353,953 - 11,362,069 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 30,592,131 - 30,600,371 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 11,406,381 - 11,414,630 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 11,406,395 - 11,414,631 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 32 | 11,490,535 - 11,498,773 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 11,316,506 - 11,324,744 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 28,630,350 - 28,638,599 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
SPP1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 87,975,714 - 87,983,411 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 87,975,667 - 87,983,532 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 88,896,866 - 88,904,563 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 89,115,826 - 89,123,587 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 89,253,980 - 89,261,741 | NCBI | | | | | Celera | 4 | 86,188,727 - 86,196,490 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q22.1 | NCBI | | | | | HuRef | 4 | 84,643,231 - 84,650,994 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 88,873,591 - 88,881,352 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 91,302,203 - 91,309,899 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Spp1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 5 | 104,582,977 - 104,588,919 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 104,582,984 - 104,588,916 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 104,435,111 - 104,441,053 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 104,435,118 - 104,441,050 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 104,864,137 - 104,870,069 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 104,657,300 - 104,681,345 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 101,744,286 - 101,750,760 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | E5 | NCBI | | | | | cM Map | 5 | 50.68 | NCBI | | | | |
|
Spp1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 5,613,569 - 5,620,695 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 5,308,885 - 5,315,120 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 5,308,885 - 5,315,162 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 5,269,750 - 5,275,787 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 6,569,945 - 6,575,982 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 5,261,625 - 5,267,707 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 6,673,686 - 6,679,965 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 6,673,686 - 6,679,901 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 6,653,086 - 6,658,937 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.1 | 14 | 6,422,741 - 6,426,400 (-) | NCBI | | | | | Celera | 14 | 5,447,814 - 5,453,553 (-) | NCBI | | Celera | | | RH 3.4 Map | 14 | 84.5 | RGD | | | | | Cytogenetic Map | 14 | p22 | NCBI | | | | |
|
Spp1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955474 | 1,913,829 - 1,922,016 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955474 | 1,914,477 - 1,922,025 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
SPP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 85,977,678 - 85,985,354 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 86,240,086 - 86,247,760 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 80,263,711 - 80,271,466 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 90,988,200 - 90,995,935 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 90,988,200 - 90,995,935 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
Spp1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
SPP1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 131,077,786 - 131,085,340 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 131,077,786 - 131,085,334 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 140,307,933 - 140,315,453 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | | Pig Cytomap | 8 | q | NCBI | | | | |
|
SPP1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 7 | 36,337,165 - 36,344,927 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 36,338,386 - 36,344,407 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 15,089,529 - 15,097,556 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Spp1 (Heterocephalus glaber - naked mole-rat) |
|