IRAK4 (interleukin 1 receptor associated kinase 4) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: IRAK4 (interleukin 1 receptor associated kinase 4) Canis lupus familiaris
Analyze
Symbol: IRAK4
Name: interleukin 1 receptor associated kinase 4
RGD ID: 12162972
Description: ENCODES a protein that exhibits ATP binding (inferred); interleukin-1 receptor binding (inferred); kinase activity (inferred); INVOLVED IN cytokine-mediated signaling pathway (ortholog); JNK cascade (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Bacterial Infections and Mycoses (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin-1 receptor-associated kinase 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12710,313,782 - 10,340,652 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2710,314,187 - 10,340,682 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2735,967,589 - 35,995,188 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02710,502,276 - 10,529,893 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2710,502,248 - 10,529,935 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12710,313,739 - 10,341,482 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02710,348,090 - 10,375,692 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02736,209,066 - 36,236,651 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
IRAK4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12710,313,782 - 10,340,652 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2710,314,187 - 10,340,682 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2735,967,589 - 35,995,188 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02710,502,276 - 10,529,893 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2710,502,248 - 10,529,935 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12710,313,739 - 10,341,482 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02710,348,090 - 10,375,692 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02736,209,066 - 36,236,651 (+)NCBIUU_Cfam_GSD_1.0
IRAK4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381243,758,951 - 43,789,541 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1243,758,944 - 43,798,307 (+)EnsemblGRCh38hg38GRCh38
GRCh371244,152,754 - 44,183,344 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361242,439,047 - 42,468,166 (+)NCBINCBI36Build 36hg18NCBI36
Build 341242,439,046 - 42,468,164NCBI
Celera1242,955,135 - 42,985,734 (+)NCBICelera
Cytogenetic Map12q12NCBI
HuRef1241,181,921 - 41,210,557 (+)NCBIHuRef
CHM1_11244,117,733 - 44,148,328 (+)NCBICHM1_1
T2T-CHM13v2.01243,717,649 - 43,748,266 (+)NCBIT2T-CHM13v2.0
Irak4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391594,441,495 - 94,466,198 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1594,441,524 - 94,479,696 (+)EnsemblGRCm39 Ensembl
GRCm381594,543,613 - 94,568,317 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1594,543,643 - 94,581,815 (+)EnsemblGRCm38mm10GRCm38
MGSCv371594,374,091 - 94,398,748 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361594,371,900 - 94,396,212 (+)NCBIMGSCv36mm8
Celera1596,687,848 - 96,713,099 (+)NCBICelera
Cytogenetic Map15E3NCBI
cM Map1548.55NCBI
Irak4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87127,561,777 - 127,588,762 (+)NCBIGRCr8
mRatBN7.27125,682,502 - 125,708,294 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7125,682,488 - 125,717,837 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7127,467,774 - 127,493,636 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07129,693,680 - 129,719,540 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07129,594,914 - 129,620,776 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07135,803,723 - 135,831,006 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7135,803,698 - 135,832,652 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07135,461,296 - 135,487,468 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47133,055,185 - 133,081,614 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17133,131,009 - 133,157,870 (+)NCBI
Celera7122,072,276 - 122,098,055 (+)NCBICelera
Cytogenetic Map7q35NCBI
Irak4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555003,010,505 - 3,051,986 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555003,010,505 - 3,039,090 (+)NCBIChiLan1.0ChiLan1.0
IRAK4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21050,383,896 - 50,414,571 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11250,380,653 - 50,411,344 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01244,941,862 - 44,972,520 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11245,810,917 - 45,841,492 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1245,810,917 - 45,841,492 (-)Ensemblpanpan1.1panPan2
Irak4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494570,892,828 - 70,916,756 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365122,248,146 - 2,272,002 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365122,248,116 - 2,272,002 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IRAK4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl574,834,600 - 74,859,344 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1574,842,184 - 74,858,125 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2577,646,762 - 77,672,328 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IRAK4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11139,967,738 - 39,999,969 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1139,977,636 - 39,999,847 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037206,510,824 - 206,545,598 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Irak4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248168,778,299 - 8,802,883 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248168,783,075 - 8,808,734 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in IRAK4
461 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003433556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022411174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022411175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022411176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038438440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038577400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_543727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000015411   ⟹   ENSCAFP00000014260
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2710,314,187 - 10,340,682 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000085816   ⟹   ENSCAFP00000053704
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2710,314,187 - 10,332,218 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845051698   ⟹   ENSCAFP00845040563
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2710,502,248 - 10,529,935 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845051737   ⟹   ENSCAFP00845040592
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2710,502,261 - 10,529,849 (-)Ensembl
RefSeq Acc Id: XM_003433556   ⟹   XP_003433604
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,332,179 (-)NCBI
Dog10K_Boxer_Tasha2735,976,038 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005636955   ⟹   XP_005637012
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,652 (-)NCBI
Dog10K_Boxer_Tasha2735,967,589 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005636956   ⟹   XP_005637013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,614 (-)NCBI
Dog10K_Boxer_Tasha2735,967,642 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005636957   ⟹   XP_005637014
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,614 (-)NCBI
Dog10K_Boxer_Tasha2735,967,642 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005636958   ⟹   XP_005637015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,614 (-)NCBI
Dog10K_Boxer_Tasha2735,967,709 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005636960   ⟹   XP_005637017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,612 (-)NCBI
Dog10K_Boxer_Tasha2735,967,655 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022411174   ⟹   XP_022266882
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,652 (-)NCBI
Dog10K_Boxer_Tasha2735,967,589 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022411175   ⟹   XP_022266883
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,417 (-)NCBI
Dog10K_Boxer_Tasha2735,967,811 - 35,995,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038438432   ⟹   XP_038294360
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,893 (-)NCBI
RefSeq Acc Id: XM_038438433   ⟹   XP_038294361
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,893 (-)NCBI
RefSeq Acc Id: XM_038438434   ⟹   XP_038294362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,893 (-)NCBI
RefSeq Acc Id: XM_038438435   ⟹   XP_038294363
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,840 (-)NCBI
RefSeq Acc Id: XM_038438436   ⟹   XP_038294364
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,773 (-)NCBI
RefSeq Acc Id: XM_038438437   ⟹   XP_038294365
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,840 (-)NCBI
RefSeq Acc Id: XM_038438438   ⟹   XP_038294366
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,670 (-)NCBI
RefSeq Acc Id: XM_038438439   ⟹   XP_038294367
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,529,827 (-)NCBI
RefSeq Acc Id: XM_038438440   ⟹   XP_038294368
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02710,502,276 - 10,521,426 (-)NCBI
RefSeq Acc Id: XM_038513126   ⟹   XP_038369054
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,482 (-)NCBI
RefSeq Acc Id: XM_038513127   ⟹   XP_038369055
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,482 (-)NCBI
RefSeq Acc Id: XM_038513128   ⟹   XP_038369056
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,482 (-)NCBI
RefSeq Acc Id: XM_038513129   ⟹   XP_038369057
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,429 (-)NCBI
RefSeq Acc Id: XM_038513130   ⟹   XP_038369058
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,362 (-)NCBI
RefSeq Acc Id: XM_038513131   ⟹   XP_038369059
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,429 (-)NCBI
RefSeq Acc Id: XM_038513132   ⟹   XP_038369060
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,259 (-)NCBI
RefSeq Acc Id: XM_038513133   ⟹   XP_038369061
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,341,416 (-)NCBI
RefSeq Acc Id: XM_038513134   ⟹   XP_038369062
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12710,313,739 - 10,333,044 (-)NCBI
RefSeq Acc Id: XM_038577391   ⟹   XP_038433319
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,066 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577392   ⟹   XP_038433320
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,066 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577394   ⟹   XP_038433322
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,066 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577395   ⟹   XP_038433323
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,120 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577396   ⟹   XP_038433324
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,186 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577397   ⟹   XP_038433325
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,120 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577398   ⟹   XP_038433326
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,288 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577399   ⟹   XP_038433327
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,209,132 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038577400   ⟹   XP_038433328
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02736,217,508 - 36,236,651 (+)NCBI
RefSeq Acc Id: XM_038640895   ⟹   XP_038496823
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,692 (-)NCBI
RefSeq Acc Id: XM_038640896   ⟹   XP_038496824
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,692 (-)NCBI
RefSeq Acc Id: XM_038640897   ⟹   XP_038496825
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,692 (-)NCBI
RefSeq Acc Id: XM_038640898   ⟹   XP_038496826
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,638 (-)NCBI
RefSeq Acc Id: XM_038640899   ⟹   XP_038496827
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,573 (-)NCBI
RefSeq Acc Id: XM_038640900   ⟹   XP_038496828
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,638 (-)NCBI
RefSeq Acc Id: XM_038640901   ⟹   XP_038496829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,469 (-)NCBI
RefSeq Acc Id: XM_038640902   ⟹   XP_038496830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,375,626 (-)NCBI
RefSeq Acc Id: XM_038640903   ⟹   XP_038496831
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02710,348,090 - 10,367,249 (-)NCBI
RefSeq Acc Id: XM_543727   ⟹   XP_543727
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,313,782 - 10,340,647 (-)NCBI
Dog10K_Boxer_Tasha2735,967,589 - 35,995,188 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003433604 (Get FASTA)   NCBI Sequence Viewer  
  XP_005637012 (Get FASTA)   NCBI Sequence Viewer  
  XP_005637013 (Get FASTA)   NCBI Sequence Viewer  
  XP_005637014 (Get FASTA)   NCBI Sequence Viewer  
  XP_005637015 (Get FASTA)   NCBI Sequence Viewer  
  XP_005637017 (Get FASTA)   NCBI Sequence Viewer  
  XP_022266882 (Get FASTA)   NCBI Sequence Viewer  
  XP_022266883 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294360 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294361 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294362 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294363 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294364 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294365 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294366 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294367 (Get FASTA)   NCBI Sequence Viewer  
  XP_038294368 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369054 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369055 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369056 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369057 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369058 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369059 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369060 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369061 (Get FASTA)   NCBI Sequence Viewer  
  XP_038369062 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433319 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433320 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433322 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433323 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433324 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433325 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433326 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433327 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433328 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496823 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496824 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496825 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496826 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496827 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496828 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496829 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496830 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496831 (Get FASTA)   NCBI Sequence Viewer  
  XP_543727 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000014260.4
  ENSCAFP00000053704.1
  ENSCAFP00030031329.1
  ENSCAFP00040035405.1
  ENSCAFP00845040563.1
  ENSCAFP00845040592
  ENSCAFP00845040592.1
RefSeq Acc Id: XP_005637017   ⟸   XM_005636960
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_543727   ⟸   XM_543727
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005637012   ⟸   XM_005636955
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005637014   ⟸   XM_005636957
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005637013   ⟸   XM_005636956
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005637015   ⟸   XM_005636958
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003433604   ⟸   XM_003433556
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022266882   ⟸   XM_022411174
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022266883   ⟸   XM_022411175
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000014260   ⟸   ENSCAFT00000015411
Ensembl Acc Id: ENSCAFP00000053704   ⟸   ENSCAFT00000085816
RefSeq Acc Id: XP_038369054   ⟸   XM_038513126
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038369055   ⟸   XM_038513127
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038369056   ⟸   XM_038513128
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038369059   ⟸   XM_038513131
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038369057   ⟸   XM_038513129
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038369061   ⟸   XM_038513133
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038369058   ⟸   XM_038513130
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038369060   ⟸   XM_038513132
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038369062   ⟸   XM_038513134
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038496823   ⟸   XM_038640895
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496824   ⟸   XM_038640896
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496825   ⟸   XM_038640897
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496828   ⟸   XM_038640900
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496826   ⟸   XM_038640898
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496830   ⟸   XM_038640902
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038496827   ⟸   XM_038640899
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496829   ⟸   XM_038640901
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496831   ⟸   XM_038640903
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038294360   ⟸   XM_038438432
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038294361   ⟸   XM_038438433
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038294362   ⟸   XM_038438434
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038294365   ⟸   XM_038438437
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038294363   ⟸   XM_038438435
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038294367   ⟸   XM_038438439
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038294364   ⟸   XM_038438436
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038294366   ⟸   XM_038438438
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038294368   ⟸   XM_038438440
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038433322   ⟸   XM_038577394
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433320   ⟸   XM_038577392
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433319   ⟸   XM_038577391
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433323   ⟸   XM_038577395
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433325   ⟸   XM_038577397
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433327   ⟸   XM_038577399
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038433324   ⟸   XM_038577396
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433326   ⟸   XM_038577398
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KC23 (UniProtKB/TrEMBL),   A0A8C0TIU6 (UniProtKB/TrEMBL),   A0A8I3S726 (UniProtKB/TrEMBL),   A0A8P0T666 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433328   ⟸   XM_038577400
- Peptide Label: isoform X2
Ensembl Acc Id: ENSCAFP00845040592   ⟸   ENSCAFT00845051737
Ensembl Acc Id: ENSCAFP00845040563   ⟸   ENSCAFT00845051698
Protein Domains
Protein kinase

Promoters
RGD ID:13688133
Promoter ID:EPDNEW_C6201
Type:multiple initiation site
Name:IRAK4_1
Description:interleukin 1 receptor associated kinase 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12710,340,564 - 10,340,624EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000009700 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030019534 UniProtKB/TrEMBL
  ENSCAFG00040021825 UniProtKB/TrEMBL
  ENSCAFG00845029210 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000015411.5 UniProtKB/TrEMBL
  ENSCAFT00000085816.2 UniProtKB/TrEMBL
  ENSCAFT00030035922.1 UniProtKB/TrEMBL
  ENSCAFT00040040592.1 UniProtKB/TrEMBL
  ENSCAFT00845051698.1 UniProtKB/TrEMBL
  ENSCAFT00845051737 ENTREZGENE
  ENSCAFT00845051737.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.533.10 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro DEATH-like_dom_sf UniProtKB/TrEMBL
  Immune_PlantDef_Kinases UniProtKB/TrEMBL
  IRAK4 UniProtKB/TrEMBL
  IRAK4_Death UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
NCBI Gene IRAK4 ENTREZGENE
PANTHER OS01G0750732 PROTEIN UniProtKB/TrEMBL
  SERINE_THREONINE-PROTEIN KINASE PBL28-RELATED UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PIRSF IRAK4 UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF47986 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A8C0KC23 ENTREZGENE
  A0A8C0TIU6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q059_CANLF UniProtKB/TrEMBL
  A0A8I3S726 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SEP0_CANLF UniProtKB/TrEMBL
  A0A8P0T666 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:42089 ENTREZGENE