SGSM1 (small G protein signaling modulator 1) - Rat Genome Database

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Gene: SGSM1 (small G protein signaling modulator 1) Canis lupus familiaris
Analyze
Symbol: SGSM1
Name: small G protein signaling modulator 1
RGD ID: 12124016
Description: ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: RUN and TBC1 domain containing 2; RUTBC2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12618,977,100 - 19,057,190 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2618,976,361 - 19,075,458 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2618,843,281 - 18,923,350 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02619,342,265 - 19,422,695 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2619,342,236 - 19,422,695 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12619,048,218 - 19,126,544 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02619,312,628 - 19,393,906 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02619,381,741 - 19,463,028 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SGSM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12618,977,100 - 19,057,190 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2618,976,361 - 19,075,458 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2618,843,281 - 18,923,350 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02619,342,265 - 19,422,695 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2619,342,236 - 19,422,695 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12619,048,218 - 19,126,544 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02619,312,628 - 19,393,906 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02619,381,741 - 19,463,028 (+)NCBIUU_Cfam_GSD_1.0
SGSM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382224,806,211 - 24,927,578 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2224,806,169 - 24,927,578 (+)EnsemblGRCh38hg38GRCh38
GRCh372225,202,178 - 25,323,545 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362223,532,136 - 23,652,813 (+)NCBINCBI36Build 36hg18NCBI36
Celera229,006,548 - 9,127,191 (+)NCBICelera
Cytogenetic Map22q11.23NCBI
HuRef228,151,216 - 8,271,579 (+)NCBIHuRef
CHM1_12225,161,077 - 25,281,547 (+)NCBICHM1_1
T2T-CHM13v2.02225,267,600 - 25,389,136 (+)NCBIT2T-CHM13v2.0
Sgsm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395113,391,086 - 113,458,654 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5113,391,086 - 113,458,652 (-)EnsemblGRCm39 Ensembl
GRCm385113,243,220 - 113,310,788 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5113,243,220 - 113,310,786 (-)EnsemblGRCm38mm10GRCm38
MGSCv375113,672,240 - 113,739,806 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365113,483,532 - 113,551,022 (-)NCBIMGSCv36mm8
Celera5110,363,560 - 110,432,092 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map555.45NCBI
Sgsm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81248,969,578 - 49,049,110 (+)NCBIGRCr8
mRatBN7.21243,320,500 - 43,386,469 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1243,321,256 - 43,386,457 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1244,487,875 - 44,552,684 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01245,100,490 - 45,165,694 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01244,161,013 - 44,226,220 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01249,329,093 - 49,395,078 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1249,328,977 - 49,395,125 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01251,102,730 - 51,169,362 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41244,329,807 - 44,395,211 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11244,211,959 - 44,256,802 (+)NCBI
Celera1244,917,920 - 44,983,077 (+)NCBICelera
Cytogenetic Map12q16NCBI
Sgsm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955455260,410 - 343,253 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955455258,472 - 343,079 (-)NCBIChiLan1.0ChiLan1.0
SGSM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22334,705,565 - 34,826,547 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12237,403,798 - 37,525,340 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0225,761,495 - 5,882,410 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12223,429,802 - 23,549,021 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2223,429,702 - 23,546,446 (+)Ensemblpanpan1.1panPan2
Sgsm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118115,728,506 - 115,807,723 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493665765,586 - 142,206 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936657109,232 - 142,195 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SGSM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1442,882,154 - 42,974,741 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11442,882,101 - 42,974,755 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21445,613,319 - 45,705,958 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SGSM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1197,906,444 - 8,024,484 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl197,906,657 - 8,024,488 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045118,097,305 - 118,215,335 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sgsm1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247472,114,562 - 2,206,060 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247472,113,259 - 2,205,718 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SGSM1
1275 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005636357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022410221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022410222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_543450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000018283   ⟹   ENSCAFP00000016932
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2618,976,361 - 19,055,509 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000018292   ⟹   ENSCAFP00000016939
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2618,977,157 - 19,055,509 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000066898   ⟹   ENSCAFP00000063176
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2618,976,361 - 19,055,509 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000068903   ⟹   ENSCAFP00000050008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2618,976,361 - 19,075,458 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000086078   ⟹   ENSCAFP00000065285
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2618,977,157 - 19,055,509 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000086509   ⟹   ENSCAFP00000060373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2618,976,361 - 19,055,509 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000091035   ⟹   ENSCAFP00000044606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2618,976,361 - 19,055,509 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845048273   ⟹   ENSCAFP00845037864
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2619,342,236 - 19,422,691 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845048376   ⟹   ENSCAFP00845037955
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2619,342,242 - 19,422,695 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845048525   ⟹   ENSCAFP00845038066
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2619,342,242 - 19,422,695 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845048668   ⟹   ENSCAFP00845038179
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2619,342,242 - 19,422,695 (+)Ensembl
RefSeq Acc Id: XM_038437056   ⟹   XP_038292984
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02619,342,265 - 19,422,695 (+)NCBI
RefSeq Acc Id: XM_038437057   ⟹   XP_038292985
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02619,342,265 - 19,421,014 (+)NCBI
RefSeq Acc Id: XM_038437058   ⟹   XP_038292986
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02619,342,320 - 19,421,014 (+)NCBI
RefSeq Acc Id: XM_038437059   ⟹   XP_038292987
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02619,342,431 - 19,421,014 (+)NCBI
RefSeq Acc Id: XM_038459132   ⟹   XP_038315060
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2618,843,281 - 18,923,350 (+)NCBI
RefSeq Acc Id: XM_038459133   ⟹   XP_038315061
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2618,843,336 - 18,921,669 (+)NCBI
RefSeq Acc Id: XM_038459134   ⟹   XP_038315062
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2618,843,447 - 18,921,669 (+)NCBI
RefSeq Acc Id: XM_038511961   ⟹   XP_038367889
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12619,048,218 - 19,126,544 (+)NCBI
RefSeq Acc Id: XM_038575468   ⟹   XP_038431396
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02619,381,741 - 19,463,028 (+)NCBI
RefSeq Acc Id: XM_038575469   ⟹   XP_038431397
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02619,381,741 - 19,461,345 (+)NCBI
RefSeq Acc Id: XM_038575470   ⟹   XP_038431398
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02619,381,796 - 19,461,345 (+)NCBI
RefSeq Acc Id: XM_038575471   ⟹   XP_038431399
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02619,381,905 - 19,461,345 (+)NCBI
RefSeq Acc Id: XM_038639649   ⟹   XP_038495577
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02619,312,628 - 19,393,906 (+)NCBI
RefSeq Acc Id: XM_038639650   ⟹   XP_038495578
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02619,312,628 - 19,392,225 (+)NCBI
RefSeq Acc Id: XM_038639651   ⟹   XP_038495579
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02619,312,683 - 19,392,225 (+)NCBI
RefSeq Acc Id: XM_038639653   ⟹   XP_038495581
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02619,312,792 - 19,392,225 (+)NCBI
RefSeq Acc Id: XM_038639654   ⟹   XP_038495582
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02619,312,984 - 19,392,225 (+)NCBI
RefSeq Acc Id: XM_543450   ⟹   XP_543450
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12618,977,100 - 19,057,190 (+)NCBI
Dog10K_Boxer_Tasha2618,843,281 - 18,921,669 (+)NCBI
Sequence:
RefSeq Acc Id: XP_543450   ⟸   XM_543450
- Peptide Label: isoform X9
- UniProtKB: A0A8C0TS44 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000050008   ⟸   ENSCAFT00000068903
Ensembl Acc Id: ENSCAFP00000063176   ⟸   ENSCAFT00000066898
Ensembl Acc Id: ENSCAFP00000065285   ⟸   ENSCAFT00000086078
Ensembl Acc Id: ENSCAFP00000060373   ⟸   ENSCAFT00000086509
Ensembl Acc Id: ENSCAFP00000016932   ⟸   ENSCAFT00000018283
Ensembl Acc Id: ENSCAFP00000016939   ⟸   ENSCAFT00000018292
Ensembl Acc Id: ENSCAFP00000044606   ⟸   ENSCAFT00000091035
RefSeq Acc Id: XP_038367889   ⟸   XM_038511961
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038495577   ⟸   XM_038639649
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038495578   ⟸   XM_038639650
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038495579   ⟸   XM_038639651
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038495581   ⟸   XM_038639653
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038495582   ⟸   XM_038639654
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038292984   ⟸   XM_038437056
- Peptide Label: isoform X1
- UniProtKB: A0A8C0TS44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038292985   ⟸   XM_038437057
- Peptide Label: isoform X2
- UniProtKB: A0A8C0TS44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038292986   ⟸   XM_038437058
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LCN1 (UniProtKB/TrEMBL),   A0A8C0RU31 (UniProtKB/TrEMBL),   A0A8I3PU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038292987   ⟸   XM_038437059
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LCN1 (UniProtKB/TrEMBL),   A0A8C0RU31 (UniProtKB/TrEMBL),   A0A8I3PU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038315060   ⟸   XM_038459132
- Peptide Label: isoform X8
- UniProtKB: A0A8C0TS44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038315061   ⟸   XM_038459133
- Peptide Label: isoform X10
- UniProtKB: A0A8C0LCN1 (UniProtKB/TrEMBL),   A0A8C0RU31 (UniProtKB/TrEMBL),   A0A8I3PU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038315062   ⟸   XM_038459134
- Peptide Label: isoform X10
- UniProtKB: A0A8C0LCN1 (UniProtKB/TrEMBL),   A0A8C0RU31 (UniProtKB/TrEMBL),   A0A8I3PU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431396   ⟸   XM_038575468
- Peptide Label: isoform X5
- UniProtKB: A0A8C0TS44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431397   ⟸   XM_038575469
- Peptide Label: isoform X6
- UniProtKB: A0A8C0TS44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431398   ⟸   XM_038575470
- Peptide Label: isoform X7
- UniProtKB: A0A8C0LCN1 (UniProtKB/TrEMBL),   A0A8C0RU31 (UniProtKB/TrEMBL),   A0A8I3PU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431399   ⟸   XM_038575471
- Peptide Label: isoform X7
- UniProtKB: A0A8C0LCN1 (UniProtKB/TrEMBL),   A0A8C0RU31 (UniProtKB/TrEMBL),   A0A8I3PU04 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845038066   ⟸   ENSCAFT00845048525
Ensembl Acc Id: ENSCAFP00845037955   ⟸   ENSCAFT00845048376
Ensembl Acc Id: ENSCAFP00845038179   ⟸   ENSCAFT00845048668
Ensembl Acc Id: ENSCAFP00845037864   ⟸   ENSCAFT00845048273
Protein Domains
Rab-GAP TBC   RUN

Promoters
RGD ID:13687951
Promoter ID:EPDNEW_C6020
Type:initiation region
Name:SGSM1_1
Description:small G protein signaling modulator 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12618,977,063 - 18,977,123EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011498 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030026138 UniProtKB/TrEMBL
  ENSCAFG00040025042 UniProtKB/TrEMBL
  ENSCAFG00845027386 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000018292.4 UniProtKB/TrEMBL
  ENSCAFT00000066898.2 UniProtKB/TrEMBL
  ENSCAFT00000068903.2 UniProtKB/TrEMBL
  ENSCAFT00000086078.2 UniProtKB/TrEMBL
  ENSCAFT00030048356.1 UniProtKB/TrEMBL
  ENSCAFT00030048361.1 UniProtKB/TrEMBL
  ENSCAFT00040046741.1 UniProtKB/TrEMBL
  ENSCAFT00845048273.1 UniProtKB/TrEMBL
  ENSCAFT00845048376.1 UniProtKB/TrEMBL
  ENSCAFT00845048525.1 UniProtKB/TrEMBL
  ENSCAFT00845048668 ENTREZGENE
  ENSCAFT00845048668.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.900 UniProtKB/TrEMBL
  2.30.29.230 UniProtKB/TrEMBL
  putative rabgap domain of human tbc1 domain family member 14 like domains UniProtKB/TrEMBL
  Ypt/Rab-GAP domain of gyp1p, domain 3 UniProtKB/TrEMBL
InterPro Rab-GTPase-TBC_dom UniProtKB/TrEMBL
  Rab-GTPase_TBC_sf UniProtKB/TrEMBL
  Run_dom UniProtKB/TrEMBL
  Run_dom_sf UniProtKB/TrEMBL
  RUN_SGSM1 UniProtKB/TrEMBL
  SGSM1/2 UniProtKB/TrEMBL
  SGSM1/2_RBD UniProtKB/TrEMBL
NCBI Gene SGSM1 ENTREZGENE
PANTHER SMALL G PROTEIN SIGNALING MODULATOR 1 UniProtKB/TrEMBL
  TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN UniProtKB/TrEMBL
Pfam PH_RBD UniProtKB/TrEMBL
  RabGAP-TBC UniProtKB/TrEMBL
  RUN UniProtKB/TrEMBL
PROSITE RUN UniProtKB/TrEMBL
  TBC_RABGAP UniProtKB/TrEMBL
SMART RUN UniProtKB/TrEMBL
  TBC UniProtKB/TrEMBL
Superfamily-SCOP SSF140741 UniProtKB/TrEMBL
  SSF47923 UniProtKB/TrEMBL
UniProt A0A8C0LCN1 ENTREZGENE
  A0A8C0PMH3_CANLF UniProtKB/TrEMBL
  A0A8C0RU31 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TS44 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PU04 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q1E4_CANLF UniProtKB/TrEMBL
  A0A8I3QDS1_CANLF UniProtKB/TrEMBL
  A0A8I3SAV5_CANLF UniProtKB/TrEMBL
  A0A8P0SGC8_CANLF UniProtKB/TrEMBL
  A0A8P0TER1_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:46105 ENTREZGENE