POMT1 (protein O-mannosyltransferase 1) - Rat Genome Database

POMT1 (protein O-mannosyltransferase 1) - Rat Genome Database

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Gene: POMT1 (protein O-mannosyltransferase 1) Canis lupus familiaris

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Symbol:

POMT1

Name:

protein O-mannosyltransferase 1

RGD ID:

12119872

Description:

ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (inferred); glycosyltransferase activity (inferred); mannosyltransferase activity (inferred); INVOLVED IN positive regulation of protein O-linked glycosylation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2K (ortholog); FOUND IN acrosomal vesicle (inferred); dolichyl-phosphate-mannose-protein mannosyltransferase complex (inferred); endoplasmic reticulum (inferred); INTERACTS WITH masitinib

Type:

protein-coding

RefSeq Status:

Previously known as:

protein O-mannosyl-transferase 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	52,615,349 - 52,631,538 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	51,882,359 - 51,899,815 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	53,517,596 - 53,535,056 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	53,519,165 - 53,535,048 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	52,297,027 - 52,312,897 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	52,614,407 - 52,631,871 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	52,708,808 - 52,726,275 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	cardiomyopathy		ISO	RGD:1348575	9068941	associated with Muscular Dystrophies	RGD	PMID:22549409\|REF_RGD_ID:11069993
POMT1	Dog	cleft lip		ISO	RGD:1348575	9068941	associated with Walker-Warburg Syndrome;DNA:insertion, deletion:exon	RGD	PMID:18640039\|REF_RGD_ID:11532685
POMT1	Dog	lissencephaly		ISO	RGD:1348575	9068941	DNA:insertions, deletions, missense mutations: :multiple	RGD	PMID:17559086\|REF_RGD_ID:11065022
POMT1	Dog	muscular dystrophy		ISO	RGD:1348575	9068941	DNA:mutations: :multiple	RGD	PMID:16575835\|REF_RGD_ID:11532686

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	autosomal recessive limb-girdle muscular dystrophy		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Autosomal recessive limb-girdle muscular dystrophy \| ClinVar Annotator: match by more ...	ClinVar	PMID:11320179\|PMID:1236901\|PMID:12369018\|PMID:14678799\|PMID:15522202\|PMID:15637732\|PMID:15733261\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16698797\|PMID:17559086\|PMID:17878207\|PMID:18640039\|PMID:18752264\|PMID:19299310\|PMID:22323514\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26467025\|PMID:27193224\|PMID:28097321\|PMID:28116189\|PMID:28157257\|PMID:28492532\|PMID:30426380\|PMID:31311558\|PMID:32528171\|PMID:32860008\|PMID:34930662\|PMID:35046417
POMT1	Dog	autosomal recessive limb-girdle muscular dystrophy type 2K		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Autosomal recessive limb-girdle muscular dystrophy type 2K \| ClinVar Annotator: more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:1236901\|PMID:12369018\|PMID:14678799\|PMID:15522202\|PMID:15637732\|PMID:15733261\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16698797\|PMID:16717220\|PMID:17559086\|PMID:17576681\|PMID:17869517\|PMID:17878207\|PMID:18414213\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19222032\|PMID:19299310\|PMID:19519795\|PMID:19763152\|PMID:20065251\|PMID:20307669\|PMID:20816175\|PMID:21102627\|PMID:22323514\|PMID:22406018\|PMID:22499106\|PMID:22522420\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:24901346\|PMID:25267602\|PMID:25326635\|PMID:25741868\|PMID:25898921\|PMID:26245304\|PMID:26467025\|PMID:27066551\|PMID:27159402\|PMID:27193224\|PMID:27363342\|PMID:27884173\|PMID:28097321\|PMID:28116189\|PMID:28157257\|PMID:28182637\|PMID:28403181\|PMID:28492532\|PMID:28556411\|PMID:28707430\|PMID:28815891\|PMID:29101272\|PMID:30060766\|PMID:30426380\|PMID:30564623\|PMID:31311558\|PMID:31680349\|PMID:31862442\|PMID:32528171\|PMID:32860008\|PMID:33146414\|PMID:34490615\|PMID:34925456\|PMID:34930662\|PMID:35046417\|PMID:35606784\|PMID:35769956\|PMID:35846108\|PMID:9536098
POMT1	Dog	cerebellar ataxia		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Cerebellar ataxia	ClinVar	PMID:25741868\|PMID:26467025\|PMID:28182637\|PMID:28492532
POMT1	Dog	congenital muscular dystrophy		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Congenital muscular dystrophy	ClinVar	PMID:23757202\|PMID:24033266\|PMID:25741868\|PMID:28492532
POMT1	Dog	congenital muscular dystrophy-dystroglycanopathy type A1		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:1236901\|PMID:12369018\|PMID:14678799\|PMID:15037715\|PMID:15522202\|PMID:15637732\|PMID:15733261\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16698797\|PMID:16717220\|PMID:17559086\|PMID:17576681\|PMID:17869517\|PMID:17878207\|PMID:18414213\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19222032\|PMID:19299310\|PMID:19519795\|PMID:20065251\|PMID:20816175\|PMID:22323514\|PMID:22499106\|PMID:22522420\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25267602\|PMID:25326635\|PMID:25741868\|PMID:25898921\|PMID:26245304\|PMID:26467025\|PMID:27066551\|PMID:27159402\|PMID:27193224\|PMID:27884173\|PMID:28097321\|PMID:28116189\|PMID:28157257\|PMID:28492532\|PMID:28556411\|PMID:29101272\|PMID:30060766\|PMID:30426380\|PMID:30564623\|PMID:31311558\|PMID:31319225\|PMID:31862442\|PMID:32528171\|PMID:32860008\|PMID:34925456\|PMID:34930662\|PMID:35046417\|PMID:35606784\|PMID:9536098
POMT1	Dog	developmental and epileptic encephalopathy		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy	ClinVar	PMID:28492532
POMT1	Dog	early infantile epileptic encephalopathy		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Early infantile epileptic encephalopathy	ClinVar	PMID:28492532
POMT1	Dog	Ehlers-Danlos syndrome classic type 1		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Ehlers-Danlos syndrome, classic type	ClinVar	PMID:28492532
POMT1	Dog	epilepsy		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Seizure	ClinVar	PMID:25741868\|PMID:28492532
POMT1	Dog	genetic disease		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:12369018\|PMID:15637732\|PMID:16199547\|PMID:16575835\|PMID:17559086\|PMID:18640039\|PMID:18752264\|PMID:19299310\|PMID:22323514\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:25954003\|PMID:26467025\|PMID:27618451\|PMID:28490743\|PMID:28492532\|PMID:30060766\|PMID:31311558\|PMID:32528171\|PMID:32860008
POMT1	Dog	hydrocephalus		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Ventriculomegaly	ClinVar	PMID:12369018\|PMID:16575835\|PMID:17559086\|PMID:18640039\|PMID:18752264\|PMID:19299310\|PMID:22323514\|PMID:23757202\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:28492532\|PMID:31311558\|PMID:32860008
POMT1	Dog	intellectual disability		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Intellectual disability syndrome	ClinVar	PMID:16575835\|PMID:18647264\|PMID:25741868\|PMID:26467025\|PMID:28492532
POMT1	Dog	muscular dystrophy-dystroglycanopathy type B1		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: MUSCULAR DYSTROPHY, CONGENITAL, POMT1-RELATED \| ClinVar Annotator: match by term: more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:1236901\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16717220\|PMID:17559086\|PMID:17576681\|PMID:17869517\|PMID:17878207\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:20816175\|PMID:22323514\|PMID:22549409\|PMID:23757202\|PMID:23894383\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26245304\|PMID:26467025\|PMID:27066551\|PMID:27159402\|PMID:27193224\|PMID:28097321\|PMID:28116189\|PMID:28492532\|PMID:28815891\|PMID:29101272\|PMID:30060766\|PMID:30426380\|PMID:31311558\|PMID:31680349\|PMID:32528171\|PMID:32860008\|PMID:33200426\|PMID:34015165\|PMID:34930662\|PMID:35046417\|PMID:35606784\|PMID:9536098
POMT1	Dog	muscular dystrophy-dystroglycanopathy type C12		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 12	ClinVar	PMID:1236901\|PMID:12369018\|PMID:15637732\|PMID:16575835\|PMID:25741868\|PMID:28116189\|PMID:28492532\|PMID:31311558
POMT1	Dog	Nervous System Malformations		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Abnormality of the nervous system	ClinVar	PMID:14678799\|PMID:15792865\|PMID:17878207\|PMID:25741868\|PMID:28097321\|PMID:28492532\|PMID:30426380\|PMID:31311558
POMT1	Dog	Neurodevelopmental Disorders		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Neurodevelopmental abnormality	ClinVar	PMID:25741868\|PMID:28492532
POMT1	Dog	primary coenzyme Q10 deficiency 7		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndrome	ClinVar	PMID:28492532
POMT1	Dog	pyridoxine-dependent epilepsy		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Pyridoxine-dependent epilepsy	ClinVar	PMID:16575835\|PMID:25741868\|PMID:28492532
POMT1	Dog	Ventriculomegaly		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Ventriculomegaly	ClinVar	PMID:12369018\|PMID:16575835\|PMID:17559086\|PMID:18640039\|PMID:18752264\|PMID:19299310\|PMID:22323514\|PMID:23757202\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:28492532\|PMID:31311558\|PMID:32860008
POMT1	Dog	Walker-Warburg syndrome		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Pagon syndrome \| ClinVar Annotator: match by term: Walker-Warburg congenital more ...	ClinVar	PMID:11320179\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16575835\|PMID:17559086\|PMID:17878207\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:22323514\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26467025\|PMID:28492532\|PMID:32860008
POMT1	Dog	Walker-Warburg syndrome		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Pagon syndrome \| ClinVar Annotator: match by term: Walker-Warburg congenital more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16717220\|PMID:17559086\|PMID:17869517\|PMID:17878207\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:20816175\|PMID:22323514\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26245304\|PMID:26467025\|PMID:27066551\|PMID:27159402\|PMID:27193224\|PMID:28097321\|PMID:28116189\|PMID:28492532\|PMID:28815891\|PMID:29101272\|PMID:30426380\|PMID:31311558\|PMID:31680349\|PMID:32860008\|PMID:34930662\|PMID:35606784
POMT1	Dog	Walker-Warburg syndrome		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Pagon syndrome \| ClinVar Annotator: match by term: Walker-Warburg congenital more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16717220\|PMID:17559086\|PMID:17869517\|PMID:17878207\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:20816175\|PMID:22323514\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26467025\|PMID:27066551\|PMID:28097321\|PMID:28116189\|PMID:28492532\|PMID:30426380\|PMID:31311558\|PMID:32860008\|PMID:35606784
POMT1	Dog	Walker-Warburg syndrome		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Muscle eye brain disease \| ClinVar Annotator: match by term: more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16717220\|PMID:17559086\|PMID:17869517\|PMID:17878207\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:20816175\|PMID:22323514\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26467025\|PMID:28097321\|PMID:28492532\|PMID:30426380\|PMID:31311558\|PMID:32860008
POMT1	Dog	Walker-Warburg syndrome		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Muscle eye brain disease \| ClinVar Annotator: match by term: more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16717220\|PMID:17559086\|PMID:17576681\|PMID:17869517\|PMID:17878207\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:20816175\|PMID:22323514\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26245304\|PMID:26467025\|PMID:27066551\|PMID:27159402\|PMID:27193224\|PMID:28097321\|PMID:28116189\|PMID:28492532\|PMID:28815891\|PMID:29101272\|PMID:30426380\|PMID:31311558\|PMID:31680349\|PMID:32860008\|PMID:34930662\|PMID:35606784\|PMID:9536098
POMT1	Dog	Walker-Warburg syndrome		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Pagon syndrome \| ClinVar Annotator: match by term: Walker-Warburg congenital more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16575835\|PMID:16717220\|PMID:17559086\|PMID:17869517\|PMID:17878207\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:22323514\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26467025\|PMID:28492532\|PMID:31311558\|PMID:32860008
POMT1	Dog	Walker-Warburg syndrome		ISO	RGD:1348575	8554872	ClinVar Annotator: match by term: Pagon syndrome \| ClinVar Annotator: match by term: Walker-Warburg congenital more ...	ClinVar	PMID:11053679\|PMID:11320179\|PMID:1236901\|PMID:12369018\|PMID:14678799\|PMID:15637732\|PMID:15792865\|PMID:16199547\|PMID:16575835\|PMID:16717220\|PMID:17559086\|PMID:17576681\|PMID:17869517\|PMID:17878207\|PMID:18513969\|PMID:18640039\|PMID:18647264\|PMID:18752264\|PMID:19299310\|PMID:20816175\|PMID:22323514\|PMID:22549409\|PMID:23757202\|PMID:24033266\|PMID:24304607\|PMID:24491487\|PMID:25741868\|PMID:26245304\|PMID:26467025\|PMID:27066551\|PMID:27159402\|PMID:27193224\|PMID:28097321\|PMID:28116189\|PMID:28492532\|PMID:28815891\|PMID:29101272\|PMID:30060766\|PMID:30426380\|PMID:31311558\|PMID:31680349\|PMID:32528171\|PMID:32860008\|PMID:34930662\|PMID:35046417\|PMID:35606784\|PMID:9536098

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	autism spectrum disorder		ISO	RGD:1348575	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:35663546

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	autosomal recessive limb-girdle muscular dystrophy type 2K		ISO	RGD:1348575	7240710		OMIM
POMT1	Dog	congenital muscular dystrophy-dystroglycanopathy type A1		ISO	RGD:1348575	7240710		OMIM
POMT1	Dog	muscular dystrophy-dystroglycanopathy type B1		ISO	RGD:1348575	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	masitinib	decreases expression	EXP		6480464	masitinib results in decreased expression of POMT1 mRNA	CTD	PMID:22747577

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	extracellular matrix organization	acts_upstream_of_or_within	IEA	UniProtKB:Q8R2R1\|ensembl:ENSMUSP00000038722	150520179		Ensembl	GO_REF:0000107
POMT1	Dog	positive regulation of protein O-linked glycosylation		ISO	RGD:620078	9068941		RGD	PMID:16704966\|REF_RGD_ID:11532759
POMT1	Dog	protein glycosylation	involved_in	IEA	UniPathway:UPA00378	150520179		UniProt	GO_REF:0000041
POMT1	Dog	protein O-linked glycosylation	involved_in	IEA	InterPro:IPR003342	150520179		InterPro	GO_REF:0000002
POMT1	Dog	protein O-linked mannosylation	involved_in	IEA	UniProtKB:Q9Y6A1\|ensembl:ENSP00000385797	150520179		Ensembl	GO_REF:0000107
POMT1	Dog	protein O-linked mannosylation	involved_in	IEA	GO:0004169	150520179		GOC	GO_REF:0000108

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	acrosomal vesicle	located_in	IEA	UniProtKB:Q8R2R1\|ensembl:ENSMUSP00000038722	150520179		Ensembl	GO_REF:0000107
POMT1	Dog	dolichyl-phosphate-mannose-protein mannosyltransferase complex	part_of	IEA	UniProtKB:Q8R2R1\|ensembl:ENSMUSP00000038722	150520179		Ensembl	GO_REF:0000107
POMT1	Dog	endoplasmic reticulum	located_in	IEA	UniRule:UR001252777	150520179		UniProt	GO_REF:0000104
POMT1	Dog	endoplasmic reticulum	located_in	IEA	UniProtKB-KW:KW-0256	150520179		UniProt	GO_REF:0000043
POMT1	Dog	endoplasmic reticulum membrane	located_in	IEA	UniProtKB-SubCell:SL-0097	150520179		UniProt	GO_REF:0000044
POMT1	Dog	endoplasmic reticulum membrane	located_in	IEA	UniProtKB:Q9Y6A1\|ensembl:ENSP00000385797	150520179		Ensembl	GO_REF:0000107
POMT1	Dog	endoplasmic reticulum membrane	located_in	IEA	UniRule:UR001252777	150520179		UniProt	GO_REF:0000104
POMT1	Dog	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
POMT1	Dog	membrane	located_in	IEA	InterPro:IPR003342	150520179		InterPro	GO_REF:0000002
POMT1	Dog	sarcoplasmic reticulum	located_in	IEA	UniProtKB:Q8R2R1\|ensembl:ENSMUSP00000038722	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
POMT1	Dog	dolichyl-phosphate-mannose-protein mannosyltransferase activity	enables	IEA	UniRule:UR001252777	150520179		UniProt	GO_REF:0000104
POMT1	Dog	glycosyltransferase activity	enables	IEA	UniProtKB-KW:KW-0328	150520179		UniProt	GO_REF:0000043
POMT1	Dog	mannosyltransferase activity	enables	IEA	InterPro:IPR003342	150520179		InterPro	GO_REF:0000002
POMT1	Dog	mannosyltransferase activity	enables	IEA	UniProtKB:Q9Y6A1\|ensembl:ENSP00000385797	150520179		Ensembl	GO_REF:0000107
POMT1	Dog	protein binding	enables	ISO	UniProtKB:Q6FHY5	9068941	PMID:32296183	IntAct	PMID:32296183
POMT1	Dog	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	150520179		UniProt	GO_REF:0000043

PMID:22301074

POMT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	52,615,349 - 52,631,538 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	51,882,359 - 51,899,815 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	53,517,596 - 53,535,056 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	53,519,165 - 53,535,048 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	52,297,027 - 52,312,897 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	52,614,407 - 52,631,871 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	52,708,808 - 52,726,275 (-)	NCBI		UU_Cfam_GSD_1.0

POMT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	131,502,918 - 131,523,799 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	131,502,789 - 131,523,806 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	134,378,305 - 134,399,186 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	133,368,110 - 133,389,014 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	131,407,865 - 131,428,746	NCBI
Celera	9	104,918,461 - 104,939,373 (+)	NCBI		Celera
Cytogenetic Map	9	q34.13	NCBI
HuRef	9	103,872,837 - 103,893,810 (+)	NCBI		HuRef
CHM1_1	9	134,527,759 - 134,548,591 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	143,715,812 - 143,736,761 (+)	NCBI		T2T-CHM13v2.0

Pomt1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	32,126,321 - 32,145,017 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	32,126,602 - 32,145,017 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	32,236,590 - 32,255,005 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	32,236,590 - 32,255,005 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	32,092,203 - 32,110,525 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	32,058,692 - 32,077,014 (+)	NCBI		MGSCv36	mm8
Celera	2	31,941,009 - 31,959,335 (+)	NCBI		Celera
Cytogenetic Map	2	B	NCBI
cM Map	2	22.09	NCBI

Pomt1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	35,918,370 - 35,936,330 (+)	NCBI		GRCr8
mRatBN7.2	3	15,520,717 - 15,538,579 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	15,520,481 - 15,538,581 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	18,590,099 - 18,607,991 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	27,175,092 - 27,192,984 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	25,425,586 - 25,443,460 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	11,253,424 - 11,271,873 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	11,254,026 - 11,271,872 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	16,602,808 - 16,620,746 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	11,348,786 - 11,366,633 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	11,245,184 - 11,263,006 (+)	NCBI
Celera	3	10,265,600 - 10,283,445 (+)	NCBI		Celera
Cytogenetic Map	3	p12	NCBI

Pomt1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	1,189,169 - 1,203,933 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	1,189,169 - 1,203,933 (+)	NCBI	ChiLan1.0	ChiLan1.0

POMT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	7,830,942 - 7,854,814 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	7,833,278 - 7,857,624 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	102,625,290 - 102,646,066 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	131,265,750 - 131,285,881 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	131,265,750 - 131,285,881 (+)	Ensembl	panpan1.1		panPan2

Pomt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	198,481,216 - 198,499,348 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	18,249,472 - 18,267,256 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	18,249,472 - 18,267,875 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POMT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	271,432,210 - 271,452,461 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	271,432,196 - 271,448,584 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	305,440,591 - 305,456,740 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POMT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	6,620,179 - 6,639,051 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	6,618,312 - 6,639,024 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666079	8,918,116 - 8,938,223 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pomt1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	4,495,254 - 4,508,616 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	4,494,701 - 4,508,735 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

.

Variants in POMT1
244 total Variants

Assembly: CanFam3.1

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
9	52616359	52616360	C	T	snv	Wolf (WO002_732), Chinese indigenous dogs (YJ7), Wolf (WO003_636)	View more Information
9	52625418	52625419	G	A	snv	Tibetan Mastiff (TM2)	View more Information

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005625222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423693	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022423701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038487107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616729	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038678242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002630233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002630234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005364890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005364891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005399333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005399334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005401466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005401469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005432671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005432672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000031668 ⟹ ENSCAFP00000029482

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000064592 ⟹ ENSCAFP00000044608

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000076310 ⟹ ENSCAFP00000046414

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000082847 ⟹ ENSCAFP00000048417

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000087099 ⟹ ENSCAFP00000066352

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000093342 ⟹ ENSCAFP00000050873

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	52,615,655 - 52,630,836 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845033466 ⟹ ENSCAFP00845026198

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	53,519,165 - 53,534,630 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845033623 ⟹ ENSCAFP00845026323

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	53,519,171 - 53,535,048 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845033767 ⟹ ENSCAFP00845026431

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	53,519,176 - 53,535,034 (-)	Ensembl

RefSeq Acc Id:

XM_005625222 ⟹ XP_005625279

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	52,615,655 - 52,631,537 (-)	NCBI
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,815 (-)	NCBI

Sequence:

show sequence

GCTCCGCAGGCACGGCGAGTCGAGCGCCGAGCAGGCGGCCGCGGGCGGCGCAGAGTGCCGAGCGGCGAGAGCCGCTAACGGTCGGCGGCCTCCTCCCCCGCGGATCCGAGGCGGAGCCCGACGCGGGG
AGCAGCTTTGCGGGAACTCGAGGCGAGGGGCATCCTCCGGGACCTGCTTCCCTACGGGATGTTGGGATTTTTGAAGCGCCCCGTGGTGGTGACAGCTGACATCAACTTGAACGTTGTGGCTCTGACTG
CAGTGGGATTACTGAGCCGCCTGTGGCATCTCGCCTATCCGAGGGCTGTGGTGAGAGATGACTGCTGGCAGTACTACGGGGCCGTTCCCTTGTGGCTAACTTTTGATGAAGTGTATTATGGGCAGTAC
ATCTCTTTTTACATGAAGCGGATCTTCTTTTTGGATGGCAGTGGACCACCGTTTGGCCACATGCTGCTGGCCTTAGGAGGTTATTTAGGAGGATTCGATGGTAACTTTTTGTGGAACAGGATCGGAGC
AGAATACAGCAGCAACGTGCCCGTGTGGTCTTTGCGCCTGCTGCCAGCCCTCACTGGGGCGTTCTCGATCCCCATGGCCTACCAGATCCTGTTGGAGCTCGGTTTTTCTCACTGCGCTGCCATGGGGG
CTGCTCTGCTGATGCTTATTGAGAACGCTCTCATCACGCAGTCAAGGCTCATGCTTTTGGAGTCAGTGTTAATATTTTTTAATCTACTGGCTGTGCTATCCTACCTGAAGTTCTCCAACTCCCAAAAA
CACAGGCCCTTCTCCTTGAGCTGGTGGTTTTGGCTGATGCTGACAGGAGTGGCCTGCTCCTGTGCGGTGGGCGTCAAGTACATGGGTATTTTCACATACCTGCTCGTGCTCGCAGTTGCTAGTGTCCA
TGCCTGGCACCTGATCGGAGACCAGACTCTGTCAAATGTCTGTGTGCTCTGTCACCTGCTTGCCCGAGCCGCCGCTCTGCTTGTCATCCCCACCCTCATGTACTTGCTGTTCTTCTACGTCCACTTGA
TCCTGGTCTACCGCTCTGGGCCCCACGATCAAATCATGTCCAGTGCTTTCCAGGCCAGTCTGGAGGGAGGACTAGCCCGGATCACGCAGGGTCAGCCCCTGGAGGTGGCCTACGGTTCCCAGGTCACT
CTGAAGAATGTCTTTGGCAAACCTGTGCCCTGCTGGCTTCATTCCCACCAGAGCACCTACCCCATGATATACGAGAACGGCCGAGGCAGCTCGCACCAGCAGCAGGTGACTTGTTACCCCTTCAAAGA
CGTCAACAACTGGTGGATCGTGAAGGATCCCGGGAGGCACCAGCTGGTGGTGAACAACCCCCCGAGGCCCGTGCGGCACGGGGACGTGGTGCAGCTGGTGCACGGTATGACCACCCGCTTCCTCAACA
CGCACGACGTGGCGGCGCCCCTGAGCCCCCACTCGCAGGAGGTGTCCTGCTACGTTGATTACAACATCTCCATGCCCTCCCAGAACCTCTGGAGACTGGACATTGTAAACCGAGAATCCGACACAGAG
GTTTGGAAGACCATCTTGTCCGAGGTCCGCCTGGTGCACGTGAACACCTCTGCCGTCCTAAAGCTGAGCGGGGCACACCTCCCAGACTGGGGGTTCCAGCAGCTGGAGGTCGTTGGGGAGAAGCTGTC
CCGGGGCTACCACGAGAGCATGGTGTGGAATGTGGAAGAACATCGATATGGCAAAAGCCAGGAGCAAAAGGAGAGGGAGCTGGAGCTGCACTCACCGGCACAGATGGACGTCAGCAGAAACCTAAGCT
TCATGGCCAGGTTCCTGGAGCTGCAGTGGAGGATGCTTACGGCAAAGAGTGATGACTCGGAGCACAAGTACAGCTCCTCGCCGCTGGACTGGGTCACCCTGGACACCAGCATCGCCTACTGGCTGCAC
CCCAGGACCAGCGCTCAGATCCACCTGCTTGGAAACATTGTGATCTGGGCTTCGGCCAGCCTCGCCATGGTGGTCTACGTCCTGCTCTTCTTCTGGTACCTGCTCAGACGCCGAAGGAGTATCTGCGA
CATCCCTGAGGATTCCTGGCTGCGCTGGGTGCTGGCCGGGGCTCTGTGTGCCGGCGGCTGGGCAGTGAACTACCTCCCCTTCTTCATGATGGAGAAGACGCTCTTCCTCTACCACTACCTTCCCGCGC
TCACCTTCCAGATCCTCCTGCTCCCTGTGGTCTTGCAGCACGTCAGCGACCACCTGTGCAGGTCCCAGCTCCTGAGGAGCCTCTTCAGCGCCCTGGTTGTGGCCTGGTACTCCTGTGCCTGTCACGTG
TTCAACACGCTGCGCCCACTGACCTACGGAGACAAGTCACTCTCACCCAGTGAACTCAAGGCCCTTCGCTGGAAAGACAGCTGGGACATCTTGATCCGGAAACACTAGCAGGACACAAACGGTGGTAA
AGAACACGCCCTGCATCCACTGCCACTAGAGCCCCCTGAACCAGGGCACATGGAGGGCTAGCATAGGACTTGTGACACCGGAAGGCAGCGGGCAGCCGTGGGGTGAGTTAGCGCCGAAGCTGCTGAGG
CCCCAGTCCTGGTGTTGGGCCTGGTCCCCTCCCTGGGCGCCCACTGGACCCAATACTGAGCCATAGCTGTCTCTGCTCCGAGTGACAGGCCTTTGATTCTGATCCCTGCACAAAGACCCTGGTGCACC
TCAGTGCCGCCGACTCTTGGCCCTTGCCCCTGCGAGACTCGGCTGGGACGCACGAGCCAGCAGCACTTCCAGCAGGCAGGACTTGTCACCCTCACATGCCCTTGTCCTGACTCTGCCTTCTGTGTACA
ATTAAAAAGGGGACAAACTGGCA

hide sequence

RefSeq Acc Id:

XM_022423692 ⟹ XP_022279400

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	52,615,655 - 52,631,538 (-)	NCBI
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,815 (-)	NCBI

Sequence:

show sequence

GGCTCCGCAGGCACGGCGAGTCGAGCGCCGAGCAGGCGGCCGCGGGCGGCGCAGAGTGCCGAGC
GGCGAGAGCCGCTAACGGTCGGCGGCCTCCTCCCCCGCGGATCCGAGGCGGAGCCCGACGCGGGGAGCAGCTTTGCGGGAACTCGAGGCGAGGGGCATCCTCCGGGACCTGCTTCCCTACGGGATGTT
GGGATTTTTGAAGCGCCCCGTGGTGGTGACAGCTGACATCAACTTGAACGTTGTGGCTCTGACTGCAGTGGGATTACTGAGCCGCCTGTGGCATCTCGCCTATCCGAGGGCTGTGGTGAGAGATGACT
GCTGGCAGTACTACGGGGCCGTTCCCTTGTGGCTAACTTTTGATGAAGTGTATTATGGGCAGTACATCTCTTTTTACATGAAGCGGATCTTCTTTTTGGATGGCAGTGGACCACCGTTTGGCCACATG
CTGCTGGCCTTAGGAGGTTATTTAGGAGGATTCGATGGTAACTTTTTGTGGAACAGGATCGGAGCAGAATACAGCAGCAACGTGCCCGTGTGGTCTTTGCGCCTGCTGCCAGCCCTCACTGGGGCGTT
CTCGATCCCCATGGCCTACCAGATCCTGTTGGAGCTCGGTTTTTCTCACTGCGCTGCCATGGGGGCTGCTCTGCTGATGCTTATTGAGAACGCTCTCATCACGCAGTCAAGGCTCATGCTTTTGGAGT
CAGTGTTAATATTTTTTAATCTACTGGCTGTGCTATCCTACCTGAAGTTCTCCAACTCCCAAAAACACAGGCCCTTCTCCTTGAGCTGGTGGTTTTGGCTGATGCTGACAGGAGTGGCCTGCTCCTGT
GCGGTGGGCGTCAAGTACATGGGTATTTTCACATACCTGCTCGTGCTCGCAGTTGCTAGTGTCCATGCCTGGCACCTGATCGGAGACCAGACTCTGTCAAATGTCTGTGTGCTCTGTCACCTGCTTGC
CCGAGCCGCCGCTCTGCTTGTCATCCCCACCCTCATGTACTTGCTGTTCTTCTACGTCCACTTGATCCTGGTCTACCGCTCTGGGCCCCACGATCAAATCATGTCCAGTGCTTTCCAGGCCAGTCTGG
AGGGAGGACTAGCCCGGATCACGCAGGGTCAGCCCCTGGAGGTGGCCTACGGTTCCCAGGTCACTCTGAAGAATGTCTTTGGCAAACCTGTGCCCTGCTGGCTTCATTCCCACCAGAGCACCTACCCC
ATGATATACGAGAACGGCCGAGGCAGCTCGCACCAGCAGCAGGTGACTTGTTACCCCTTCAAAGACGTCAACAACTGGTGGATCGTGAAGGATCCCGGGAGGCACCAGCTGGTGGTGAACAACCCCCC
GAGGCCCGTGCGGCACGGGGACGTGGTGCAGCTGGTGCACGGTATGACCACCCGCTTCCTCAACACGCACGACGTGGCGGCGCCCCTGAGCCCCCACTCGCAGGAGGTGTCCTGCTACGTTGATTACA
ACATCTCCATGCCCTCCCAGAACCTCTGGAGACTGGACATTGTAAACCGAGAATCCGACACAGAGGTTTGGAAGACCATCTTGTCCGAGGTCCGCCTGGTGCACGTGAACACCTCTGCCGTCCTAAAG
CTGAGCGGGGCACACCTCCCAGACTGGGGGTTCCAGCAGCTGGAGGTCGTTGGGGAGAAGCTGTCCCGGGGCTACCACGAGAGCATGGTGTGGAATGTGGAAGAACATCGATATGGCAAAAGCCAGGA
GCAAAAGGAGAGGGAGCTGGAGCTGCACTCACCGGCACAGATGGACGTCAGCAGAAACCTAAGCTTCATGGCCAGGTTCCTGGAGCTGCAGTGGAGGATGCTTACGGCAAAGAGTGATGACTCGGAGC
ACAAGTACAGCTCCTCGCCGCTGGACTGGGTCACCCTGGACACCAGCATCGCCTACTGGCTGCACCCCAGGACCAGCGCTCAGATCCACCTGCTTGGAAACATTGTGATCTGGGCTTCGGCCAGCCTC
GCCATGGTGGTCTACGTCCTGCTCTTCTTCTGGTACCTGCTCAGACGCCGAAGGAGTATCTGCGACATCCCTGAGGAGACAAAATGTTGTCGTTGCATTCCCACACTGTTAGAGGCTTCTTCGGGGAA
ATGCAAGGACCAGGCAGGGATTGCTGTGACCCCAGGATATTCCTGGCTGCGCTGGGTGCTGGCCGGGGCTCTGTGTGCCGGCGGCTGGGCAGTGAACTACCTCCCCTTCTTCATGATGGAGAAGACGC
TCTTCCTCTACCACTACCTTCCCGCGCTCACCTTCCAGATCCTCCTGCTCCCTGTGGTCTTGCAGCACGTCAGCGACCACCTGTGCAGGTCCCAGCTCCTGAGGAGCCTCTTCAGCGCCCTGGTTGTG
GCCTGGTACTCCTGTGCCTGTCACGTGTTCAACACGCTGCGCCCACTGACCTACGGAGACAAGTCACTCTCACCCAGTGAACTCAAGGCCCTTCGCTGGAAAGACAGCTGGGACATCTTGATCCGGAA
ACACTAGCAGGACACAAACGGTGGTAAAGAACACGCCCTGCATCCACTGCCACTAGAGCCCCCTGAACCAGGGCACATGGAGGGCTAGCATAGGACTTGTGACACCGGAAGGCAGCGGGCAGCCGTGG
GGTGAGTTAGCGCCGAAGCTGCTGAGGCCCCAGTCCTGGTGTTGGGCCTGGTCCCCTCCCTGGGCGCCCACTGGACCCAATACTGAGCCATAGCTGTCTCTGCTCCGAGTGACAGGCCTTTGATTCTG
ATCCCTGCACAAAGACCCTGGTGCACCTCAGTGCCGCCGACTCTTGGCCCTTGCCCCTGCGAGACTCGGCTGGGACGCACGAGCCAGCAGCACTTCCAGCAGGCAGGACTTGTCACCCTCACATGCCC
TTGTCCTGACTCTGCCTTCTGTGTACAATTAAAAAGGGGACAAACTGGCA

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RefSeq Acc Id:

XM_022423694 ⟹ XP_022279402

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	52,615,655 - 52,630,806 (-)	NCBI
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,085 (-)	NCBI

Sequence:

show sequence

ATGTTGGGATTTTTGAAGCGCCCCGTGGTGGTGACAGCTGACATCAACTTGAACGTTGTGGCTC
TGACTGCAGTGGGATTACTGAGCCGCCTGTGGCATCTCGCCTATCCGAGGGCTGTGGTTTTTGATGAAGTGTATTATGGGCAGTACATCTCTTTTTACATGAAGCGGATCTTCTTTTTGGATGGCAGT
GGACCACCGTTTGGCCACATGCTGCTGGCCTTAGGAGGTTATTTAGGAGGATTCGATGGTAACTTTTTGTGGAACAGGATCGGAGCAGAATACAGCAGCAACGTGCCCGTGTGGTCTTTGCGCCTGCT
GCCAGCCCTCACTGGGGCGTTCTCGATCCCCATGGCCTACCAGATCCTGTTGGAGCTCGGTTTTTCTCACTGCGCTGCCATGGGGGCTGCTCTGCTGATGCTTATTGAGAACGCTCTCATCACGCAGT
CAAGGCTCATGCTTTTGGAGTCAGTGTTAATATTTTTTAATCTACTGGCTGTGCTATCCTACCTGAAGTTCTCCAACTCCCAAAAACACAGGCCCTTCTCCTTGAGCTGGTGGTTTTGGCTGATGCTG
ACAGGAGTGGCCTGCTCCTGTGCGGTGGGCGTCAAGTACATGGGTATTTTCACATACCTGCTCGTGCTCGCAGTTGCTAGTGTCCATGCCTGGCACCTGATCGGAGACCAGACTCTGTCAAATGTCTG
TGTGCTCTGTCACCTGCTTGCCCGAGCCGCCGCTCTGCTTGTCATCCCCACCCTCATGTACTTGCTGTTCTTCTACGTCCACTTGATCCTGGTCTACCGCTCTGGGCCCCACGATCAAATCATGTCCA
GTGCTTTCCAGGCCAGTCTGGAGGGAGGACTAGCCCGGATCACGCAGGGTCAGCCCCTGGAGGTGGCCTACGGTTCCCAGGTCACTCTGAAGAATGTCTTTGGCAAACCTGTGCCCTGCTGGCTTCAT
TCCCACCAGAGCACCTACCCCATGATATACGAGAACGGCCGAGGCAGCTCGCACCAGCAGCAGGTGACTTGTTACCCCTTCAAAGACGTCAACAACTGGTGGATCGTGAAGGATCCCGGGAGGCACCA
GCTGGTGGTGAACAACCCCCCGAGGCCCGTGCGGCACGGGGACGTGGTGCAGCTGGTGCACGGTATGACCACCCGCTTCCTCAACACGCACGACGTGGCGGCGCCCCTGAGCCCCCACTCGCAGGAGG
TGTCCTGCTACGTTGATTACAACATCTCCATGCCCTCCCAGAACCTCTGGAGACTGGACATTGTAAACCGAGAATCCGACACAGAGGTTTGGAAGACCATCTTGTCCGAGGTCCGCCTGGTGCACGTG
AACACCTCTGCCGTCCTAAAGCTGAGCGGGGCACACCTCCCAGACTGGGGGTTCCAGCAGCTGGAGGTCGTTGGGGAGAAGCTGTCCCGGGGCTACCACGAGAGCATGGTGTGGAATGTGGAAGAACA
TCGATATGGCAAAAGCCAGGAGCAAAAGGAGAGGGAGCTGGAGCTGCACTCACCGGCACAGATGGACGTCAGCAGAAACCTAAGCTTCATGGCCAGGTTCCTGGAGCTGCAGTGGAGGATGCTTACGG
CAAAGAGTGATGACTCGGAGCACAAGTACAGCTCCTCGCCGCTGGACTGGGTCACCCTGGACACCAGCATCGCCTACTGGCTGCACCCCAGGACCAGCGCTCAGATCCACCTGCTTGGAAACATTGTG
ATCTGGGCTTCGGCCAGCCTCGCCATGGTGGTCTACGTCCTGCTCTTCTTCTGGTACCTGCTCAGACGCCGAAGGAGTATCTGCGACATCCCTGAGGATTCCTGGCTGCGCTGGGTGCTGGCCGGGGC
TCTGTGTGCCGGCGGCTGGGCAGTGAACTACCTCCCCTTCTTCATGATGGAGAAGACGCTCTTCCTCTACCACTACCTTCCCGCGCTCACCTTCCAGATCCTCCTGCTCCCTGTGGTCTTGCAGCACG
TCAGCGACCACCTGTGCAGGTCCCAGCTCCTGAGGAGCCTCTTCAGCGCCCTGGTTGTGGCCTGGTACTCCTGTGCCTGTCACGTGTTCAACACGCTGCGCCCACTGACCTACGGAGACAAGTCACTC
TCACCCAGTGAACTCAAGGCCCTTCGCTGGAAAGACAGCTGGGACATCTTGATCCGGAAACACTAGCAGGACACAAACGGTGGTAAAGAACACGCCCTGCATCCACTGCCACTAGAGCCCCCTGAACC
AGGGCACATGGAGGGCTAGCATAGGACTTGTGACACCGGAAGGCAGCGGGCAGCCGTGGGGTGAGTTAGCGCCGAAGCTGCTGAGGCCCCAGTCCTGGTGTTGGGCCTGGTCCCCTCCCTGGGCGCCC
ACTGGACCCAATACTGAGCCATAGCTGTCTCTGCTCCGAGTGACAGGCCTTTGATTCTGATCCCTGCACAAAGACCCTGGTGCACCTCAGTGCCGCCGACTCTTGGCCCTTGCCCCTGCGAGACTCGG
CTGGGACGCACGAGCCAGCAGCACTTCCAGCAGGCAGGACTTGTCACCCTCACATGCCCTTGTCCTGACTCTGCCTTCTGTGTACAATTAAAAAGGGGACAAACTGGCA

hide sequence

RefSeq Acc Id:

XM_038487107 ⟹ XP_038343035

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	52,297,027 - 52,312,897 (-)	NCBI

RefSeq Acc Id:

XM_038548974 ⟹ XP_038404902

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,726,275 (-)	NCBI

RefSeq Acc Id:

XM_038548975 ⟹ XP_038404903

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,726,104 (-)	NCBI

RefSeq Acc Id:

XM_038548976 ⟹ XP_038404904

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,726,275 (-)	NCBI

RefSeq Acc Id:

XM_038548977 ⟹ XP_038404905

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,726,275 (-)	NCBI

RefSeq Acc Id:

XM_038548978 ⟹ XP_038404906

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,725,531 (-)	NCBI

RefSeq Acc Id:

XM_038548979 ⟹ XP_038404907

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,725,553 (-)	NCBI

RefSeq Acc Id:

XM_038548980 ⟹ XP_038404908

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,725,553 (-)	NCBI

RefSeq Acc Id:

XM_038548981 ⟹ XP_038404909

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,725,553 (-)	NCBI

RefSeq Acc Id:

XM_038548982 ⟹ XP_038404910

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,725,549 (-)	NCBI

RefSeq Acc Id:

XM_038548983 ⟹ XP_038404911

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,725,553 (-)	NCBI

RefSeq Acc Id:

XM_038548984 ⟹ XP_038404912

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,725,432 (-)	NCBI

RefSeq Acc Id:

XM_038612925 ⟹ XP_038468853

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,871 (-)	NCBI

RefSeq Acc Id:

XM_038612926 ⟹ XP_038468854

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,700 (-)	NCBI

RefSeq Acc Id:

XM_038612927 ⟹ XP_038468855

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,871 (-)	NCBI

RefSeq Acc Id:

XM_038612928 ⟹ XP_038468856

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,871 (-)	NCBI

RefSeq Acc Id:

XM_038612929 ⟹ XP_038468857

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,132 (-)	NCBI

RefSeq Acc Id:

XM_038612930 ⟹ XP_038468858

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,154 (-)	NCBI

RefSeq Acc Id:

XM_038612931 ⟹ XP_038468859

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,154 (-)	NCBI

RefSeq Acc Id:

XM_038612932 ⟹ XP_038468860

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,154 (-)	NCBI

RefSeq Acc Id:

XM_038612933 ⟹ XP_038468861

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,150 (-)	NCBI

RefSeq Acc Id:

XM_038612934 ⟹ XP_038468862

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,154 (-)	NCBI

RefSeq Acc Id:

XM_038612935 ⟹ XP_038468863

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,033 (-)	NCBI

RefSeq Acc Id:

XM_038616729 ⟹ XP_038472657

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,644 (-)	NCBI

RefSeq Acc Id:

XM_038616743 ⟹ XP_038472671

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,815 (-)	NCBI

RefSeq Acc Id:

XM_038616761 ⟹ XP_038472689

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,107 (-)	NCBI

RefSeq Acc Id:

XM_038616768 ⟹ XP_038472696

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,107 (-)	NCBI

RefSeq Acc Id:

XM_038616772 ⟹ XP_038472700

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,107 (-)	NCBI

RefSeq Acc Id:

XM_038616781 ⟹ XP_038472709

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,103 (-)	NCBI

RefSeq Acc Id:

XM_038616790 ⟹ XP_038472718

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,107 (-)	NCBI

RefSeq Acc Id:

XM_038616799 ⟹ XP_038472727

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,898,986 (-)	NCBI

RefSeq Acc Id:

XM_038678232 ⟹ XP_038534160

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,535,056 (-)	NCBI

RefSeq Acc Id:

XM_038678233 ⟹ XP_038534161

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,885 (-)	NCBI

RefSeq Acc Id:

XM_038678234 ⟹ XP_038534162

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,535,056 (-)	NCBI

RefSeq Acc Id:

XM_038678235 ⟹ XP_038534163

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,535,056 (-)	NCBI

RefSeq Acc Id:

XM_038678236 ⟹ XP_038534164

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,314 (-)	NCBI

RefSeq Acc Id:

XM_038678237 ⟹ XP_038534165

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,336 (-)	NCBI

RefSeq Acc Id:

XM_038678238 ⟹ XP_038534166

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,336 (-)	NCBI

RefSeq Acc Id:

XM_038678239 ⟹ XP_038534167

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,336 (-)	NCBI

RefSeq Acc Id:

XM_038678240 ⟹ XP_038534168

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,332 (-)	NCBI

RefSeq Acc Id:

XM_038678241 ⟹ XP_038534169

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,336 (-)	NCBI

RefSeq Acc Id:

XM_038678242 ⟹ XP_038534170

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,534,215 (-)	NCBI

RefSeq Acc Id:

XR_005364890

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,710,374 - 52,726,275 (-)	NCBI

RefSeq Acc Id:

XR_005364891

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	52,708,808 - 52,726,275 (-)	NCBI

RefSeq Acc Id:

XR_005399333

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,615,976 - 52,631,871 (-)	NCBI

RefSeq Acc Id:

XR_005399334

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	52,614,407 - 52,631,871 (-)	NCBI

RefSeq Acc Id:

XR_005401466

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,883,925 - 51,899,815 (-)	NCBI

RefSeq Acc Id:

XR_005401469

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	51,882,359 - 51,899,815 (-)	NCBI

RefSeq Acc Id:

XR_005432671

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,519,165 - 53,535,056 (-)	NCBI

RefSeq Acc Id:

XR_005432672

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	53,517,596 - 53,535,056 (-)	NCBI


Protein RefSeqs	XP_005625279	(Get FASTA)	NCBI Sequence Viewer
	XP_022279400	(Get FASTA)	NCBI Sequence Viewer
	XP_022279402	(Get FASTA)	NCBI Sequence Viewer
	XP_038343035	(Get FASTA)	NCBI Sequence Viewer
	XP_038404902	(Get FASTA)	NCBI Sequence Viewer
	XP_038404903	(Get FASTA)	NCBI Sequence Viewer
	XP_038404904	(Get FASTA)	NCBI Sequence Viewer
	XP_038404905	(Get FASTA)	NCBI Sequence Viewer
	XP_038404906	(Get FASTA)	NCBI Sequence Viewer
	XP_038404907	(Get FASTA)	NCBI Sequence Viewer
	XP_038404908	(Get FASTA)	NCBI Sequence Viewer
	XP_038404909	(Get FASTA)	NCBI Sequence Viewer
	XP_038404910	(Get FASTA)	NCBI Sequence Viewer
	XP_038404911	(Get FASTA)	NCBI Sequence Viewer
	XP_038404912	(Get FASTA)	NCBI Sequence Viewer
	XP_038468853	(Get FASTA)	NCBI Sequence Viewer
	XP_038468854	(Get FASTA)	NCBI Sequence Viewer
	XP_038468855	(Get FASTA)	NCBI Sequence Viewer
	XP_038468856	(Get FASTA)	NCBI Sequence Viewer
	XP_038468857	(Get FASTA)	NCBI Sequence Viewer
	XP_038468858	(Get FASTA)	NCBI Sequence Viewer
	XP_038468859	(Get FASTA)	NCBI Sequence Viewer
	XP_038468860	(Get FASTA)	NCBI Sequence Viewer
	XP_038468861	(Get FASTA)	NCBI Sequence Viewer
	XP_038468862	(Get FASTA)	NCBI Sequence Viewer
	XP_038468863	(Get FASTA)	NCBI Sequence Viewer
	XP_038472657	(Get FASTA)	NCBI Sequence Viewer
	XP_038472671	(Get FASTA)	NCBI Sequence Viewer
	XP_038472689	(Get FASTA)	NCBI Sequence Viewer
	XP_038472696	(Get FASTA)	NCBI Sequence Viewer
	XP_038472700	(Get FASTA)	NCBI Sequence Viewer
	XP_038472709	(Get FASTA)	NCBI Sequence Viewer
	XP_038472718	(Get FASTA)	NCBI Sequence Viewer
	XP_038472727	(Get FASTA)	NCBI Sequence Viewer
	XP_038534160	(Get FASTA)	NCBI Sequence Viewer
	XP_038534161	(Get FASTA)	NCBI Sequence Viewer
	XP_038534162	(Get FASTA)	NCBI Sequence Viewer
	XP_038534163	(Get FASTA)	NCBI Sequence Viewer
	XP_038534164	(Get FASTA)	NCBI Sequence Viewer
	XP_038534165	(Get FASTA)	NCBI Sequence Viewer
	XP_038534166	(Get FASTA)	NCBI Sequence Viewer
	XP_038534167	(Get FASTA)	NCBI Sequence Viewer
	XP_038534168	(Get FASTA)	NCBI Sequence Viewer
	XP_038534169	(Get FASTA)	NCBI Sequence Viewer
	XP_038534170	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000029482.4
	ENSCAFP00000044608.2
	ENSCAFP00000046414.1
	ENSCAFP00000048417.2
	ENSCAFP00030025113.1
	ENSCAFP00030025232.1
	ENSCAFP00040006375.1
	ENSCAFP00040006403.1
	ENSCAFP00040006428.1
	ENSCAFP00845026198.1
	ENSCAFP00845026323
	ENSCAFP00845026323.1
	ENSCAFP00845026431
	ENSCAFP00845026431.1

RefSeq Acc Id:	XP_005625279 ⟸ XM_005625222
- Peptide Label:	isoform X3
- UniProtKB:	A0A8P0SNS4 (UniProtKB/TrEMBL), A0A8C0NIX7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLGFLKRPVVVTADINLNVVALTAVGLLSRLWHLAYPRAVVRDDCWQYYGAVPLWLTFDEVYYGQYISFYMKRIFFLDGSGPPFGHMLLALGGYLGGFDGNFLWNRIGAEYSSNVPVWSLRLLPALTG AFSIPMAYQILLELGFSHCAAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFSNSQKHRPFSLSWWFWLMLTGVACSCAVGVKYMGIFTYLLVLAVASVHAWHLIGDQTLSNVCVLCHL LARAAALLVIPTLMYLLFFYVHLILVYRSGPHDQIMSSAFQASLEGGLARITQGQPLEVAYGSQVTLKNVFGKPVPCWLHSHQSTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNN PPRPVRHGDVVQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTEVWKTILSEVRLVHVNTSAVLKLSGAHLPDWGFQQLEVVGEKLSRGYHESMVWNVEEHRYGKS QEQKERELELHSPAQMDVSRNLSFMARFLELQWRMLTAKSDDSEHKYSSSPLDWVTLDTSIAYWLHPRTSAQIHLLGNIVIWASASLAMVVYVLLFFWYLLRRRRSICDIPEDSWLRWVLAGALCAGG WAVNYLPFFMMEKTLFLYHYLPALTFQILLLPVVLQHVSDHLCRSQLLRSLFSALVVAWYSCACHVFNTLRPLTYGDKSLSPSELKALRWKDSWDILIRKH hide sequence

RefSeq Acc Id:	XP_022279400 ⟸ XM_022423692
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0RL10 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLGFLKRPVVVTADINLNVVALTAVGLLSRLWHLAYPRAVVRDDCWQYYGAVPLWLTFDEVYYGQYISFYMKRIFFLDGSGPPFGHMLLALGGYLGGFDGNFLWNRIGAEYSSNVPVWSLRLLPALTG AFSIPMAYQILLELGFSHCAAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFSNSQKHRPFSLSWWFWLMLTGVACSCAVGVKYMGIFTYLLVLAVASVHAWHLIGDQTLSNVCVLCHL LARAAALLVIPTLMYLLFFYVHLILVYRSGPHDQIMSSAFQASLEGGLARITQGQPLEVAYGSQVTLKNVFGKPVPCWLHSHQSTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNN PPRPVRHGDVVQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTEVWKTILSEVRLVHVNTSAVLKLSGAHLPDWGFQQLEVVGEKLSRGYHESMVWNVEEHRYGKS QEQKERELELHSPAQMDVSRNLSFMARFLELQWRMLTAKSDDSEHKYSSSPLDWVTLDTSIAYWLHPRTSAQIHLLGNIVIWASASLAMVVYVLLFFWYLLRRRRSICDIPEETKCCRCIPTLLEASS GKCKDQAGIAVTPGYSWLRWVLAGALCAGGWAVNYLPFFMMEKTLFLYHYLPALTFQILLLPVVLQHVSDHLCRSQLLRSLFSALVVAWYSCACHVFNTLRPLTYGDKSLSPSELKALRWKDSWDILI RKH hide sequence

RefSeq Acc Id:	XP_022279402 ⟸ XM_022423694
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0LG49 (UniProtKB/TrEMBL), A0A8C0NIX7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLGFLKRPVVVTADINLNVVALTAVGLLSRLWHLAYPRAVVFDEVYYGQYISFYMKRIFFLDGS GPPFGHMLLALGGYLGGFDGNFLWNRIGAEYSSNVPVWSLRLLPALTGAFSIPMAYQILLELGFSHCAAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFSNSQKHRPFSLSWWFWLML TGVACSCAVGVKYMGIFTYLLVLAVASVHAWHLIGDQTLSNVCVLCHLLARAAALLVIPTLMYLLFFYVHLILVYRSGPHDQIMSSAFQASLEGGLARITQGQPLEVAYGSQVTLKNVFGKPVPCWLH SHQSTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNNPPRPVRHGDVVQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTEVWKTILSEVRLVHV NTSAVLKLSGAHLPDWGFQQLEVVGEKLSRGYHESMVWNVEEHRYGKSQEQKERELELHSPAQMDVSRNLSFMARFLELQWRMLTAKSDDSEHKYSSSPLDWVTLDTSIAYWLHPRTSAQIHLLGNIV IWASASLAMVVYVLLFFWYLLRRRRSICDIPEDSWLRWVLAGALCAGGWAVNYLPFFMMEKTLFLYHYLPALTFQILLLPVVLQHVSDHLCRSQLLRSLFSALVVAWYSCACHVFNTLRPLTYGDKSL SPSELKALRWKDSWDILIRKH hide sequence

Ensembl Acc Id:

ENSCAFP00000044608 ⟸ ENSCAFT00000064592

Ensembl Acc Id:

ENSCAFP00000066352 ⟸ ENSCAFT00000087099

Protein Domains

MIR

RGD ID:

Promoter ID:

Type:

initiation region

Name:

POMT1_1

Description:

protein O-mannosyltransferase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	52,631,481 - 52,631,541	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000019905	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030015594	UniProtKB/TrEMBL
	ENSCAFG00040003840	UniProtKB/TrEMBL
	ENSCAFG00845018932	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000031668.5	UniProtKB/TrEMBL
	ENSCAFT00000064592.2	UniProtKB/TrEMBL
	ENSCAFT00000076310.2	UniProtKB/TrEMBL
	ENSCAFT00000082847.2	UniProtKB/TrEMBL
	ENSCAFT00030028808.1	UniProtKB/TrEMBL
	ENSCAFT00030028945.1	UniProtKB/TrEMBL
	ENSCAFT00040007324.1	UniProtKB/TrEMBL
	ENSCAFT00040007353.1	UniProtKB/TrEMBL
	ENSCAFT00040007378.1	UniProtKB/TrEMBL
	ENSCAFT00845033466.1	UniProtKB/TrEMBL
	ENSCAFT00845033623	ENTREZGENE
	ENSCAFT00845033623.1	UniProtKB/TrEMBL
	ENSCAFT00845033767	ENTREZGENE
	ENSCAFT00845033767.1	UniProtKB/TrEMBL
Gene3D-CATH	2.80.10.50	UniProtKB/TrEMBL
InterPro	GlyclTrfase_39-like	UniProtKB/TrEMBL
	Glyco_trans_39/83	UniProtKB/TrEMBL
	MIR_dom_sf	UniProtKB/TrEMBL
	MIR_motif	UniProtKB/TrEMBL
	PMT_4TMC	UniProtKB/TrEMBL
KEGG Report	cfa:608039	UniProtKB/TrEMBL
NCBI Gene	POMT1	ENTREZGENE
PANTHER	PROTEIN O-MANNOSYL-TRANSFERASE 1	UniProtKB/TrEMBL
	PTHR10050	UniProtKB/TrEMBL
Pfam	MIR	UniProtKB/TrEMBL
	PMT	UniProtKB/TrEMBL
	PMT_4TMC	UniProtKB/TrEMBL
PROSITE	MIR	UniProtKB/TrEMBL
SMART	MIR	UniProtKB/TrEMBL
Superfamily-SCOP	SSF82109	UniProtKB/TrEMBL
UniProt	A0A8C0LG49	ENTREZGENE
	A0A8C0NIX7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Q0D2_CANLF	UniProtKB/TrEMBL
	A0A8C0Q4K1_CANLF	UniProtKB/TrEMBL
	A0A8C0RL10	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RXH6_CANLF	UniProtKB/TrEMBL
	A0A8I3P4Z4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P5F6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PDD8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NUY6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NWI9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NYG9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SNS4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:44810	ENTREZGENE