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Gene: STX6 (syntaxin 6) Canis lupus familiaris

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Symbol:

STX6

Name:

syntaxin 6

RGD ID:

12103641

Description:

ENCODES a protein that exhibits SNAP receptor activity (inferred); syntaxin binding (inferred); INVOLVED IN endocytic recycling (ortholog); synaptic vesicle to endosome fusion (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH 1q24 Deletion Syndrome (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN recycling endosome (ortholog); synaptic vesicle membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

syntaxin-6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	STX6 (syntaxin 6)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Stx6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Stx6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Stx6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	STX6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Stx6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	STX6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	STX6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Stx6 (syntaxin 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	STX10 (syntaxin 10)	HGNC	OrthoDB

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	14,452,663 - 14,506,120 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	14,458,404 - 14,556,917 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	14,030,381 - 14,083,562 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	14,179,873 - 14,232,084 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	14,184,065 - 14,232,056 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	14,089,893 - 14,143,515 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	14,196,719 - 14,249,919 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	14,320,679 - 14,373,902 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
STX6	Dog	1q24 Deletion Syndrome		ISO	STX6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: 1q24q25 microdeletion syndrome	ClinVar	PMID:21548129 more ...
STX6	Dog	autosomal recessive chronic granulomatous disease 2		ISO	STX6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Granulomatous disease more ...	ClinVar	PMID:28492532
STX6	Dog	gastrointestinal stromal tumor		ISO	STX6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
STX6	Dog	parathyroid carcinoma		ISO	STX6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
STX6	Dog	neuronal ceroid lipofuscinosis 6A		ISO	STX6 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23516525
STX6	Dog	progressive supranuclear palsy		ISO	STX6 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21685912

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
STX6	Dog	endocytic recycling	acts_upstream_of_or_within	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	endocytic recycling	involved_in	ISO	Stx6 (Rattus norvegicus)	9068941	PMID:30962439	UniProt	PMID:30962439 and REF_RGD_ID:152995575
STX6	Dog	endocytic recycling	involved_in	ISO	STX6 (Homo sapiens)	9068941	PMID:23677696	UniProt	PMID:23677696
STX6	Dog	endosome organization	acts_upstream_of_or_within	IEA	UniProtKB:Q9JKK1 and ensembl:ENSMUSP00000027743	150520179		Ensembl	GO_REF:0000107
STX6	Dog	Golgi vesicle transport	involved_in	IEA	InterPro:IPR015260	150520179		InterPro	GO_REF:0000002
STX6	Dog	intracellular protein transport	involved_in	IEA	InterPro:IPR006012	150520179		InterPro	GO_REF:0000002
STX6	Dog	membrane fusion	involved_in	IEA	GO:0005484	150520179		GOC	GO_REF:0000108
STX6	Dog	protein transport	involved_in	IEA	UniProtKB-KW:KW-0653	150520179		UniProt	GO_REF:0000043
STX6	Dog	regulation of protein localization	involved_in	IEA	UniProtKB:O43752 more ...	150520179		Ensembl	GO_REF:0000107
STX6	Dog	retrograde transport, endosome to Golgi	involved_in	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	synaptic vesicle to endosome fusion	involved_in	ISO	Stx6 (Rattus norvegicus)	9068941	PMID:17004320	SynGO	PMID:17004320 and REF_RGD_ID:12050136
STX6	Dog	vesicle fusion	involved_in	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	vesicle-mediated transport		ISO	Stx6 (Rattus norvegicus)	9068941		RGD	PMID:8663448 and REF_RGD_ID:61759
STX6	Dog	vesicle-mediated transport	involved_in	IEA	InterPro:IPR010989	150520179		InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
STX6	Dog	cytosol	located_in	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	early endosome	located_in	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	Golgi apparatus	located_in	IEA	UniProtKB:O43752 more ...	150520179		Ensembl	GO_REF:0000107
STX6	Dog	Golgi apparatus	located_in	IEA	UniProtKB-KW:KW-0333	150520179		UniProt	GO_REF:0000043
STX6	Dog	Golgi membrane	located_in	IEA	UniProtKB-SubCell:SL-0134	150520179		UniProt	GO_REF:0000044
STX6	Dog	membrane	located_in	IEA	InterPro:IPR006012 more ...	150520179		InterPro	GO_REF:0000002
STX6	Dog	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
STX6	Dog	membrane	located_in	IEA	UniProtKB:Q9JKK1 and ensembl:ENSMUSP00000027743	150520179		Ensembl	GO_REF:0000107
STX6	Dog	nucleoplasm	located_in	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	organelle membrane	located_in	IEA	ARBA:ARBA00027624	150520179		UniProt	GO_REF:0000117
STX6	Dog	perinuclear region of cytoplasm	located_in	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	phagocytic vesicle	located_in	IEA	UniProtKB:Q9JKK1 and ensembl:ENSMUSP00000027743	150520179		Ensembl	GO_REF:0000107
STX6	Dog	recycling endosome	located_in	ISO	Stx6 (Rattus norvegicus)	9068941	PMID:30962439	UniProt	PMID:30962439 and REF_RGD_ID:152995575
STX6	Dog	SNARE complex	part_of	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107
STX6	Dog	synaptic vesicle membrane	is_active_in	ISO	Stx6 (Rattus norvegicus)	9068941	PMID:17004320	SynGO	PMID:17004320 and REF_RGD_ID:12050136
STX6	Dog	synaptic vesicle membrane	is_active_in	ISO	Stx6 (Rattus norvegicus)	9068941	PMID:17110340	SynGO	PMID:17110340 and REF_RGD_ID:12050113
STX6	Dog	trans-Golgi network	located_in	IEA	ARBA:ARBA00029112	150520179		UniProt	GO_REF:0000117
STX6	Dog	trans-Golgi network	located_in	IEA	UniProtKB:O43752 more ...	150520179		Ensembl	GO_REF:0000107
STX6	Dog	trans-Golgi network membrane	located_in	IEA	UniProtKB:Q9JKK1 and ensembl:ENSMUSP00000027743	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
STX6	Dog	protein binding	enables	ISO	UniProtKB:Q9UID3-1	9068941	PMID:23932592	IntAct	PMID:23932592
STX6	Dog	protein binding	enables	ISO	PR:Q8R307	9068941	PMID:14668490	MGI	PMID:14668490
STX6	Dog	protein binding	enables	ISO	UniProtKB:P50232	9068941	PMID:16618809	ParkinsonsUK-UCL	PMID:16618809 and REF_RGD_ID:11535113
STX6	Dog	protein binding	enables	ISO	UniProtKB:P27105 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
STX6	Dog	protein binding	enables	ISO	UniProtKB:Q12846 and UniProtKB:Q9H115	9068941	PMID:21516116	IntAct	PMID:21516116
STX6	Dog	protein binding	enables	ISO	UniProtKB:Q12846	9068941	PMID:28514442	IntAct	PMID:28514442
STX6	Dog	protein binding	enables	ISO	UniProtKB:O14653 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
STX6	Dog	protein binding	enables	ISO	UniProtKB:O95721	9068941	PMID:33422265	IntAct	PMID:33422265
STX6	Dog	protein binding	enables	ISO	UniProtKB:O75379 and UniProtKB:O95721	9068941	PMID:25419848	IntAct	PMID:25419848
STX6	Dog	protein binding	enables	ISO	UniProtKB:O75379	9068941	PMID:19557002	IntAct	PMID:19557002
STX6	Dog	protein binding	enables	ISO	UniProtKB:Q9HD26	9068941	PMID:11384996 and PMID:11707463	UniProt	PMID:11384996 and PMID:11707463
STX6	Dog	protein binding	enables	ISO	UniProtKB:Q9P0N8	9068941	PMID:23818989	UniProt	PMID:23818989
STX6	Dog	protein binding	enables	ISO	UniProtKB:P05067	9068941	PMID:32814053	IntAct	PMID:32814053
STX6	Dog	protein binding	enables	ISO	UniProtKB:Q15075	9068941	PMID:10506127	UniProt	PMID:10506127 and REF_RGD_ID:8553312
STX6	Dog	protein binding	enables	ISO	UniProtKB:Q9UID3	9068941	PMID:20685960	UniProt	PMID:20685960
STX6	Dog	protein binding	enables	ISO	UniProtKB:O94812	9068941	PMID:28626000	UniProt	PMID:28626000
STX6	Dog	protein binding	enables	ISO	UniProtKB:E1WAC8	9068941	PMID:22190682	AgBase	PMID:22190682
STX6	Dog	protein binding	enables	ISO	UniProtKB:O14653 more ...	9068941	PMID:33961781	IntAct	PMID:33961781
STX6	Dog	protein binding		ISO	Vps18 (Rattus norvegicus)	9068941		RGD	PMID:14668490 and REF_RGD_ID:1549677
STX6	Dog	protein binding	enables	ISO	UniProtKB:O08700	9068941	PMID:9243506	BHF-UCL	PMID:9243506 and REF_RGD_ID:8553703
STX6	Dog	protein binding	enables	ISO	UniProtKB:A0JNW5	9068941	PMID:20163565	UniProt	PMID:20163565 and REF_RGD_ID:13514086
STX6	Dog	protein binding	enables	ISO	UniProtKB:P54921	9068941	PMID:9243506	BHF-UCL	PMID:9243506 and REF_RGD_ID:8553703
STX6	Dog	protein binding	enables	ISO	UniProtKB:P00533	9068941	PMID:30662352	IntAct	PMID:30662352
STX6	Dog	SNAP receptor activity	enables	IEA	InterPro:IPR006012	150520179		InterPro	GO_REF:0000002
STX6	Dog	syntaxin binding	enables	IEA	UniProtKB:O43752 and ensembl:ENSP00000258301	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

STX6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	14,452,663 - 14,506,120 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	14,458,404 - 14,556,917 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	14,030,381 - 14,083,562 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	14,179,873 - 14,232,084 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	14,184,065 - 14,232,056 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	14,089,893 - 14,143,515 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	14,196,719 - 14,249,919 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	14,320,679 - 14,373,902 (-)	NCBI		UU_Cfam_GSD_1.0

STX6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	180,972,725 - 181,022,870 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	180,972,712 - 181,023,121 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	180,941,861 - 180,992,006 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	179,208,798 - 179,258,669 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	177,673,835 - 177,723,703	NCBI
Celera	1	154,049,189 - 154,099,059 (-)	NCBI		Celera
Cytogenetic Map	1	q25.3	NCBI
HuRef	1	152,173,031 - 152,222,901 (-)	NCBI		HuRef
CHM1_1	1	182,364,849 - 182,414,723 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	180,327,972 - 180,378,137 (-)	NCBI		T2T-CHM13v2.0

Stx6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	155,034,374 - 155,083,405 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	155,034,461 - 155,084,002 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	155,158,628 - 155,207,567 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	155,158,715 - 155,208,256 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	157,005,833 - 157,050,647 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	156,920,960 - 156,965,735 (+)	NCBI		MGSCv36	mm8
Celera	1	157,590,422 - 157,635,333 (+)	NCBI		Celera
Cytogenetic Map	1	G3	NCBI
cM Map	1	66.46	NCBI

Stx6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	69,882,647 - 69,928,895 (+)	NCBI		GRCr8
mRatBN7.2	13	67,332,329 - 67,378,580 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	67,332,314 - 67,378,576 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	69,917,560 - 69,963,589 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	71,231,256 - 71,277,146 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	68,491,771 - 68,538,463 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	72,804,218 - 72,850,757 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	72,804,218 - 72,852,967 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	77,739,763 - 77,785,254 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	70,121,864 - 70,169,379 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	70,135,943 - 70,183,455 (+)	NCBI
Celera	13	67,207,720 - 67,253,510 (+)	NCBI		Celera
Cytogenetic Map	13	q21	NCBI

Stx6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	20,048,155 - 20,089,906 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	20,042,552 - 20,089,853 (-)	NCBI	ChiLan1.0	ChiLan1.0

STX6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	68,748,337 - 68,798,313 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	68,406,649 - 68,456,600 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	156,450,202 - 156,500,143 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	160,117,825 - 160,167,314 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	160,117,825 - 160,167,314 (-)	Ensembl	panpan1.1		panPan2

Stx6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	90,515,308 - 90,558,479 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	8,362,050 - 8,399,737 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	8,362,059 - 8,405,228 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STX6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	122,529,727 - 122,580,608 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	122,533,737 - 122,580,631 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	134,569,941 - 134,616,721 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STX6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	48,380,359 - 48,427,279 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	48,397,712 - 48,426,676 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	49,763,242 - 49,813,281 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stx6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624771	1,227,052 - 1,265,158 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624771	1,222,809 - 1,264,662 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in STX6
456 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005622389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022420926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022420927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038480853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038480854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038480855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038542196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038542197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038542198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038606356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038606357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038606359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038671035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038671036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038671037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005328125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005361976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005373545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005396489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005429682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000020371 ⟹ ENSCAFP00000018902

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	14,458,404 - 14,556,917 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000020377 ⟹ ENSCAFP00000018908

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	14,458,404 - 14,506,006 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000079417 ⟹ ENSCAFP00000044019

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	14,461,555 - 14,506,006 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845004599 ⟹ ENSCAFP00845003674

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	14,184,065 - 14,232,056 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845004619 ⟹ ENSCAFP00845003691

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	14,184,065 - 14,210,753 (-)	Ensembl

RefSeq Acc Id:

XM_005622389 ⟹ XP_005622446

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	14,452,663 - 14,506,120 (-)	NCBI
Dog10K_Boxer_Tasha	7	14,030,381 - 14,083,562 (-)	NCBI

Sequence:

show sequence

AAGTGGTGCAGCGGGCGGCGTCTGTGGTTGGCCGCGGCCGCGGGTGCCGGGGGCGGGGTCAAGCCGGCCAGACGCGCCGGGAGGAGCCGGGGGAGGAGGCCGGCGCGGGGCCCGGCGTCAGGTTCGGG
GATCCGGTGTGCCGGCCGAGCGAGCGCTGGAGCCGCGGCGGTCCGGTGCGCCCCGGCCTGCGCGCGCAGCTGCTCTGGGTTCCCCCGGCCGAGGCGCCGGCGGCTGCGGCAGGCCGGTGGGGTGGGCG
GAGGGAGGCTCGGCGGGCGCCCTGTGCGCGGAGCAGGCGCGAGGCAGCCGGGGGCCGGGACGCCATGTCCATGGAGGACCCCTTCTTTGTGGTGAAAGGAGAGGTACAGAAAGCAGTCAACACTGCCC
AGGGATTATTTCAGAGATGGACAGAGCTCCTCCAAGATCCCTCTACAGCAACGAGGGAAGAAATCGACTGGACCACCAATGAGCTGAGAAACAATCTCCGGAGTATAGAATGGGATTTGGAGGACCTT
GATGAGACCATCAGCATAGTTGAAGCAAACCCTAGAAAATTCAACCTCGATGCGACTGAATTGAGTATAAGAAAAACCTTCATCACAAGTACTCGGCAGGTTGTCAGGGACATGAAGGATCAGATGTC
AGCTTCATCTGTGCAGGCATTAGCTGAACGAAAAAACAGACAGGCACTGCTAGGGGACAGCGGTGGCCAGAACTGGAGCACGGGGACAACAGACAAATACGGGCGCCTCGATCGTGAGCTCCAGCTAG
CTAACTCCCATTTCATTGAGGAGCAGCAGGCACAGCAACAGTTGATCGTGGAACAGCAGGATGAGCAGTTGGAGCTGGTCTCTGGCAGCATTGGGGTGCTGAAGAACATGTCCCAGCGCATCGGAGGG
GAGCTGGAGGAACAGGCAGTTATGTTGGATGATTTTTCTCATGAGTTGGAGAGCACTCAGTCTCGGCTGGACAACGTGATGAAGAAACTTGCAAAAGTATCTCACATGACCAGTGATCGGCGCCAGTG
GTGCGCCATAGCCGTCCTCTTCGTGGTCCTGCTGGTCGTGCTGCTCTTCTTCTTAGTGCTGTGACGGCAGTGCCGCGCCTGTGCACGGACCCCCGGGGAGGCGGGAAGCAACACCCCGGCCGCGCCGC
CGGCTCCCACACTCCTCTCTGGAAAACACAGCCTGTGCTGACCTCCCTCCCCGTGACCCCACCACCGAGGCAGCTGCTCTGACCCGGCGCCAGCAGGGCCCCTGGGAGAAGGAAGCAGACGACTGTGC
ACTCCTGGCGCCGCCTGTCCCCTTCTGAGGATGAGGACGGCTCACCACTGCTTTGCCTCCCGGGCCTTGTGCCCCCTGGACAGTCTTGAGGAACCCGGCAAGGTTTGCAGACTCAACTAGTGCTTGCT
ATTGCTCATTCCATCCATCTTTGGCAGCTCTTTTCTCCTGCCCAGACCACCCTCCCCCTGCACCCTGGCTCAGACCCCGGCCCGGAGAGCACTGTGGGGCATGTGGGCTCCTGGGGAGGCCTCATTTC
CTGTCGTGGCAGCGGCCTTGCCCCCCCACCCCCACCCCCAGCTGCTTGCTAATGGGGACAGAAGGCCCAGAAGCAGTTTGTGATAGAAAATGCAGTGATCCATTTTTCAGGGATAAGTGCTGGGATAA
AATTGCTTTTCCAGGCTCATTATTTTGTGGTAGAAGTAGCTAATGGTAAATAATGCAAAGCACTAGGCTTTGGGGGTGCTAACAGCTGTTGGCTTGAACTGAAGGGAGGAGAGGGCAGAAGGACCCAG
GGTTTGCACAGCTGAGGGAAGGGTGGCCGAGGTTGCGGGAGGTCGGAGCCCTGCCAAATTCATGTCGCTGTCCTGGTGCAACTTGTATTTTTAGGACACCCCTCACCTGTATGGCTGCCGCGCAGCTC
AGCCGAACACTCGGATGGTCTGGATCCTGGGCCAGCCTCGTGGCCGGTTGGTTAGGTCATTCCTGTGGTACTCTGCTTTGGGCTGGGGGTGGGGGTGGGGGGGTGGTTAGTACACTGGCAGTACAGCG
ACACTCAGAAACCATAATGACCAAAAAGGCTAGTTCTGGACTGGACTCCTCTTACCCTGTGAATAATGACAAGAATGGGTAGGTGAACTTGGGTGTTTTTTTTTTTTTTGCCTCCTAAGAGGACAACT
CAGTTTTTTATCCATTCAAATCACTGAGCCAATCCAAATTTAAAGAACGGATGCTTTAATTGAGTTTTAGTAGCTGAAACTGCTGAGATGCTAAACTTCAAGCTTCCGATGACTTTTTAAACGCCTCC
AACGTCCCCGCATTGGTAGGATATTTTTATAACCTCCCTGATGCTGTCACCGATGTTGAAGCGGCAGCCGACCCGGAGCCTGGTGGCAGGGGCCCCGCACTCTCCCCACCACCTTCTTCTGCACTTGG
AAAGCACAGCAACGTCTGGATAGAGCTCTAGCTTTGACTTCCTGTTTCCTCCTCTGTTGGGGCCTATTCCTCAGCACACTCATTCTTTTTTTCTTTTTTCTTTTTTTCTTGTTTTGTCTGTGTTTCTT
GGGGTTTTTTGTTGTTGTTTATTTGCTTTGGGCTTCCACCCCCTCCCTTTTTTCGTGATTTGCAATGATGTACTTGCCCAGCTGACTTTTGAATTGCACTTTTTAATAAATATTTGTAACAATTTTTT
AAAGAAGGGTATTTTCTCATGGTTAGGATCATGGTAGGTAAGGAAATCTGCCTCTTGACGAAAGCTAAAAGCAGATTTATACAACTCAAAGGGTGGTTGACATCCACGTTTACACTCAATTCTATTTG
ATATATAAATAAGTTATTTTTTTTCAAATTAGCAAAAAAAAGATTACTACAAAGGGCTTCAGATGTAGGGTACTAGATTATTTTACAAGTTTTGAGACTCATTCAAATAGTCTTCTCTAAACTTAGAA
CAGGGATGGTCCTTAGATTTGCATAACAATGTACAGGTCTTTGTTAAACTTAAATGGGGACCTTGTCTCAGTACTGTAATCCACACTCCACATGAGAAGAGGCAGCCGGCGTCCTAATGACCTGTATG
ATTTTGCTGTTTAAAAGCCATGCTCTTTTCCTGTTACCAGGTTTAGTGTGTCCTGCACAACTGTCATGTGTGTCAGTGGGGCTTGTTGGGAGCATGCCTGGTCATTAATGAGGAAGATGCTTCCCTGA
TGTCGGGGGGCCAAGTGTTGTGACCCAGAGACTTAATTATTAAATGTCTGGATATATTTAGAATCGGCATGATGACCTCACTTAATTTCAAGTGTTTGCTAAACAGTGGCTATTGTAGACCAGACTCC
TGCTGAAGCTGAATAGGGAATTATTTAGGAGGAGAAAGTTTACTTTAAAATCCAAGCACTGCCTGCGTTCTCCCCCCAGGCACCACTGTCCCCCTGCCTCAGAGGAACTGCTCTATGACAGGCAGCCT
CTTCTGTATTGGTCAGAGCCGGGCTCTGCCCCAAGCAGAGCTTCTGGCACAGCCAGCTTGATCCTGGGGCTGACCCTGTTGTGTCCGAACTGGGCATCACTACAGACGAGTGTTCATTTGAAAGTCTC
TGCTCAAACTGCAAACCATGGCAGTGAGAGGGAACAAGCCAGAGGCTTAGGTTGATTTTTGAGAACAAATGGTTTCCTCGTCAGTGATCCTAACACTGCTGGGCTTTAGCGGGCACCTGAGTGGTCCC
CGTGCTCCCCCCTGTAGAGTGGGGAGAGAAGTAGACCCTGTGACACCCTGCACTGCTTGGAGGCACATCCTGTATAAAGCTTTTCCCTCCAGCCTCTGCACCTCGACACATAGTCATCATTTCTAAGG
AACTGGCATAAATGATGTGCTCCATAAGTGATGGATAAATGAGAGCTCCACTTACGTTTGTTGGTTTATTGGAAGAACGGTTTTCTAATCAGCTGATTGGGGGGGGGGTGGCGGCTGGGGAGCAAACC
ATTGAGAGAGTTTGCCAGAGTGGGGATCCAGCTGGAAAACTGAAATACCTTTAGTTTTTAGTCCTCATTTTTCATCTTGCCTTTGTGTGGACGAAGAACTCCCGGCGCTCTGTGTGTGCCCGCTGCTG
GATGGCAATTGGAAGTCACAGCGTGTGTGTTACACGAGGATCTTCACGCCAGAGCCGAAGGGGGAGAAACTTGGTAGCTTGCCCATTATTCTCTGCTTTTAGCCAGAGTTAAACAGACTGATGGGTCT
GGTAGCCAACAACTTGGCAACTTCCACTCCTTCTCACCTCGTGAGATTCAGGGCTGTGAAGAGAAATCTAGTCTAACTCCAACAGAAATCTGTCTCTGTTAAGTATTTTACCTTCTGTAAGTGAAGGT
GGCAGAGCCAAGATCTTTCTCTTGGTAATTTCCCTGGCTATAGAGTGAGACCATTACCTTTCTAGAGAATTCTGAGCATTTGAAGATCTAGGAACTGAATTATATATAAGAGTTGCTTTTCAGCTCAG
TGAACTCGGACTGCTTGGCTTCACCTTGTACTAGTAGCAGGATGAACTTGGAAGCAAAACCAAAGTGGGACAGCCTGAAAAGTGGAAGTCCTGAAACACAGCACGCACCACGTCCCTCTTTGTCTTCC
TCTTGCTGGCATTTCTTTCCCTCCCAGGTTTTGTAAGAGTAACGTTTTTGTGAAAAGCCTATTCTTTCTCCATCAAGAGCAGAGAGAGGTGAAACCAAAGGGCTTGCAGACACCCAGCCCCTCCATCA
CGCAGCACCACCCTGCCCGAAGTCCATTCATGAAGATGGCACCCCGCTGAAGGGACCTGGGTGGCCAAGGTTGCGTTTGGGGGGTGACACCTCAGGCTTCTCCCAGGGCCTCTGCTTCTGAGTGGAGG
GCAGCTGCAGCATCAGGCTGGCCTGTCCAGCTGTCCTTTACCCAGACCCCAGCCTTCACAAACTTACTTGCACTTAAAGTGAAGAGGACTTCTTCCTGCCAGGCCCCCGTCGGTGTATTGTATGGAAA
CGTGGACACTGGCCTCTCTGTGTTTCCTTGCTGTGATACTCACTGGGAAGCTGCTGTCTGGTGTCAAGTCCAGAAAATCAGGGAAATTCTGAGTAGAACAGCCATTCCAACTCAGCTTGGCCCTCTTG
TTTTAGAGATGAGCCCAGCACAGCTCCCCCAGTAGACACGGGAGGCATTTGCTGTGCCGCACTCTGGACCTGGCCCCAGGGAGCGCGTACGCTGTCTGCAACAAGTGACCTTGGCCACATAACAAGGT
AGGCTGGTTGTGACCTGTCATGCACACCCCTCACCCCAGCCATTTGGTGGGTTGTTTTTTGTTTTTTGTTTTGTTCTGCTTTGCTTTTGGACAAGCACTGAAGCTCTAAAAGTTCCAGTGGTGCCTTG
GCCATGTTGCTGCCATCTATCTACATGCGGCAACTCTTCGTTATGTTATAGTCTCTTTACTAATCCAGGTGCGTGGGGAGGTGGGAAAAAAAGAAGACTTGGTTGCTCTGTGACATGAGCTAATGCTT
TGGTGCTGTTTTCCTTCCCATGTGACCTTTGTCCAGAAATGCCCTTTCCCCAAGGCTGTGTAGACGGGAACTGTGCTGAGATGGTGATGGGCCCAGTTATCTGCCCGGCATTTTGATGGACCTGGCCT
GCCCAACTGCAGCCAGTCCCATGTGAGAAAGTGTATTTTATCCTTTTTTTTTTAGGTTATGAGTTCTTGAACCCAGAAGCCACTTGATTATCCCCAGGGGTGTTAGAAATATGACCATCAGCCCATTG
TTCGCTGACCAAAGCTCTCAAGCCTTGTGTAGCCCTGGTAGTAGCCCGGTGCTCCACAGGAGGCAGGCTTTCTGTCAGCCCTGGGGTGAGACCACATTCACGATCATTCTTTCTGTTCTGCAGAAAGT
GGGTTTTAGCTGAGACGCTGCTACTGAACAGGAATTGCAACCCTGTAGGTAAAGTGTGCTCTGGGGGAGGCAGAAGTTCTAGTCCTTAGGAAAAGAAAGTATCTGTCCAGGGTGGGGAGGGGCCAGCC
AGGTGTCCCCCACTAAAATAGGTTAGTGGAACGTGCTTGCGGGAGAATGCCCCGGATGAGGAAAGGGCCAAAGACAGCAAGCTGTAAATGATTGTGGATTCGCTTTTTGTAAGTGGAAATATACTTTC
ACTGGCTCATTTGTAATCAGAAATTAGTGTAATGAAAAAATCAAATGTGTAATGATAGGTGGCAGTGCTCAGTGGGACTTAAACCATTGTGTTTTTCTTCAAAGGATAAATAACCTACAGTGTTTTAT
TTCTAAATATCTAGAAGGTACAAACTAAGGAAGTGAGATCAAAGATGAGAATTGCAAATGCCTGGGTGATTTCCAGGTGGTAGCCCAGGTGCCAGTTTTCACCCTTCGCCACAGGTAGATGCATTCTT
GCTCTTTCTACAGGCTGGGTCTCCAAGTGTGATGTGGGACCAGCCAAGGTGGTATTGCCCGGGAGCTTGCTAGAAATGCAGGTTGTCAGGCCCCACACCTGCTGGATCACAAACTCTGGGGAGTGCAC
AAGCCTTCCAAGGGGGTTCTGACGCCCACTCTAGTTTCAGAATCACTGCTATTGCGTCGTGGAATTTAGGCTACAGTAAACCATCCCTGCATATTAAAACCTCTTCCACAGCTTTGAGTGTAATCCTG
ACATTAAACAAACTGATGACACTATACACTTGAAAACTTTTTAAAAATACTTGTGTAAGAAAAATCTCAACTAGCCGTCTTTCAAAGTGGTATTTTTACACCCTGAAGTCTATCAGTAATGTTTCTTA
CTTCTGCTCTTGAAATCATGTTACAGCTGTACAAAGAACACTGTTCAGTATTAAAAGAGAAATGGAGAGACCATGA

hide sequence

RefSeq Acc Id:

XM_022420926 ⟹ XP_022276634

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	14,461,607 - 14,506,047 (-)	NCBI
Dog10K_Boxer_Tasha	7	14,038,299 - 14,083,529 (-)	NCBI

Sequence:

show sequence

GCGCCGGGAGGAGCCGGGGGAGGAGGCCGGCGCGGGGCCCGGCGTCAGGTTCGGGGATCCGGTGTGCCGGCCGAGCGAGCGCTGGAGCCGCGGCGGTCCGGTGCGCCCCGGCCTGCGCGCGCAGCTGC
TCTGGGTTCCCCCGGCCGAGGCGCCGGCGGCTGCGGCAGGCCGGTGGGGTGGGCGGAGGGAGGCTCGGCGGGCGCCCTGTGCGCGGAGCAGGCGCGAGGCAGCCGGGGGCCGGGACGCCATGTCCATG
GAGGACCCCTTCTTTGTGGTGAAAGGAGAGGTACAGAAAGCAGTCAACACTGCCCAGGGATTATTTCAGAGATGGACAGAGCTCCTCCAAGATCCCTCTACAGCAACGAGGGAAGAAATCGACTGGAC
CACCAATGAGCTGAGAAACAATCTCCGGAGTATAGAATGGGATTTGGAGGACCTTGATGAGACCATCAGCATAGTTGAAGCAAACCCTAGAAAATTCAACCTCGATGCGACTGAATTGAGTATAAGAA
AAACCTTCATCACAAGTACTCGGCAGGTTGTCAGGGACATGAAGGATCAGATGTCAGCTTCATCTGTGCAGGCATTAGCTGAACGAAAAAACAGACAGGCACTGCTAGGGGACAGCGGTGGCCAGAAC
TGGAGCACGGGGACAACAGACAAATACGGGCGCCTCGATCGTGAGCTCCAGCTAGCTAACTCCCATTTCATTGAGGAGCAGCAGGCACAGCAACAGTTGATCGTGGAACAGCAGGATGAGCAGTTGGA
GCTGGTCTCTGGCAGCATTGGGGTGCTGAAGAACATGTCCCAGCGCATCGGAGGGGAGCTGGAGGAACAGGCAGTTATGTTGGATGATTTTTCTCATGAGTTGGAGAGCACTCAGTCTCGGCTGGACA
ACGTGATGAAGAAACTTGCAAAAGTATCTCACATGACCAGTGGGCAGAAAAATATACTGGAAGGGGAAAGAAACCTGCCATTAGAATTCTCTTTGTTCCTGTCTAACTTTTTGAGGCAGGTCTTGAAC
ATGCAAAACTGGTTAGGCTTTTCCCTTGAGAGCACAGAAGCCTTTGGGTAGTACTGACACCTTCTGGGGAGAAGTCAGCTGGGGTACCAGCTCCCAGAGGTTACGTGGTTCATGCTCTATCACAGCAG
CTTAGCACTTCGGAGGAAAGTGGCTTTAAAAGAGTGTTCCTGGGTTGTGCTGGCCTGTGTGACCCAACTTCTTGATGAAAAACCCCCATTTAATGGAGTTGTGGAAGAAGTGACTGGAGGTGGGAGGG
GATTGGGTAGAGGCTGATGGAAAGCCAAAAAGTGGACAATTGGTTCAATATTGGGTTTAAGAATGCAGGACAGGGGGAGGGGCAGGGATCTATATGAGGTTGGGGGGTGCTCAGGAAGCAATTACCTT
GACTGTTTTGTCTTGGAGGAATATCGACTAATCATTTTATTTCCTTTAAAGATTTTATTATTTCTTTATTTGACAGAACGTGCGCACTCACCAAGCAGGGGAGGGG

hide sequence

RefSeq Acc Id:

XM_022420927 ⟹ XP_022276635

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	14,458,518 - 14,506,045 (-)	NCBI
Dog10K_Boxer_Tasha	7	14,036,236 - 14,083,529 (-)	NCBI

Sequence:

show sequence

GCCGGGAGGAGCCGGGGGAGGAGGCCGGCGCGGGGCCCGGCGTCAGGTTCGGGGATCCGGTGTGCCGGCCGAGCGAGCGCTGGAGCCGCGGCGGTCCGGTGCGCCCCGGCCTGCGCGCGCAGCTGCTC
TGGGTTCCCCCGGCCGAGGCGCCGGCGGCTGCGGCAGGCCGGTGGGGTGGGCGGAGGGAGGCTCGGCGGGCGCCCTGTGCGCGGAGCAGGCGCGAGGCAGCCGGGGGCCGGGACGCCATGTCCATGGA
GGACCCCTTCTTTGTGGTGAAAGGAGAGGTACAGAAAGCAGTCAACACTGCCCAGGGATTATTTCAGAGATGGACAGAGCTCCTCCAAGATCCCTCTACAGCAACGAGGGAAGAAATCGACTGGACCA
CCAATGAGCTGAGAAACAATCTCCGGAGTATAGAATGGGATTTGGAGGACCTTGATGAGACCATCAGCATAGTTGAAGCAAACCCTAGAAAATTCAACCTCGATGCGACTGAATTGAGTATAAGAAAA
ACCTTCATCACAAGTACTCGGCAGGTTGTCAGGGACATGAAGGATCAGATGTCAGCTTCATCTGTGCAGGCATTAGCTGAACGAAAAAACAGACAGGCACTGCTAGGGGACAGCGGTGGCCAGAACTG
GAGCACGGGGACAACAGACAAATACGGGCGCCTCGATCGTGAGCTCCAGCTAGCTAACTCCCATTTCATTGAGGAGCAGCAGGCACAGCAACAGTTGATCGTGGAACAGCAGGATGAGCAGTTGGAGC
TGGTCTCTGGCAGCATTGGGGTGCTGAAGAACATGTCCCAGCGCATCGGAGGGGAGCTGGAGGAACAGGCAGTTATGTTGGATGATTTTTCTCATGAGTTGGAGAGCACTCAGTCTCGGCTGGACAAC
GTGATGAAGAAACTTGCAAAAGTATCTCACATGACCAGTGGTGTTGTATGTGACGCAGCCTTGAGGAGCATAGGTCCCGGGCTCTAATCCTCGTATCATGCC

hide sequence

RefSeq Acc Id:

XM_038480853 ⟹ XP_038336781

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	14,098,239 - 14,143,482 (-)	NCBI

RefSeq Acc Id:

XM_038480854 ⟹ XP_038336782

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	14,089,893 - 14,143,515 (-)	NCBI

RefSeq Acc Id:

XM_038480855 ⟹ XP_038336783

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	14,095,749 - 14,143,482 (-)	NCBI

RefSeq Acc Id:

XM_038542196 ⟹ XP_038398124

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	14,328,620 - 14,373,869 (-)	NCBI

RefSeq Acc Id:

XM_038542197 ⟹ XP_038398125

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	14,320,679 - 14,373,902 (-)	NCBI

RefSeq Acc Id:

XM_038542198 ⟹ XP_038398126

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	14,326,536 - 14,373,869 (-)	NCBI

RefSeq Acc Id:

XM_038606356 ⟹ XP_038462284

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	14,204,641 - 14,249,886 (-)	NCBI

RefSeq Acc Id:

XM_038606357 ⟹ XP_038462285

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	14,196,719 - 14,249,919 (-)	NCBI

RefSeq Acc Id:

XM_038606359 ⟹ XP_038462287

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	14,202,575 - 14,249,886 (-)	NCBI

RefSeq Acc Id:

XM_038671035 ⟹ XP_038526963

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	14,188,208 - 14,232,051 (-)	NCBI

RefSeq Acc Id:

XM_038671036 ⟹ XP_038526964

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	14,179,873 - 14,232,084 (-)	NCBI

RefSeq Acc Id:

XM_038671037 ⟹ XP_038526965

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	14,185,730 - 14,232,051 (-)	NCBI

RefSeq Acc Id:

XR_005328125

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	14,089,893 - 14,143,515 (-)	NCBI

RefSeq Acc Id:

XR_005361976

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	14,320,679 - 14,373,902 (-)	NCBI

RefSeq Acc Id:

XR_005373545

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	7	14,030,381 - 14,083,562 (-)	NCBI

RefSeq Acc Id:

XR_005396489

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	14,196,719 - 14,249,919 (-)	NCBI

RefSeq Acc Id:

XR_005429682

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	14,179,873 - 14,232,084 (-)	NCBI


Protein RefSeqs	XP_005622446	(Get FASTA)	NCBI Sequence Viewer
	XP_022276634	(Get FASTA)	NCBI Sequence Viewer
	XP_022276635	(Get FASTA)	NCBI Sequence Viewer
	XP_038336781	(Get FASTA)	NCBI Sequence Viewer
	XP_038336782	(Get FASTA)	NCBI Sequence Viewer
	XP_038336783	(Get FASTA)	NCBI Sequence Viewer
	XP_038398124	(Get FASTA)	NCBI Sequence Viewer
	XP_038398125	(Get FASTA)	NCBI Sequence Viewer
	XP_038398126	(Get FASTA)	NCBI Sequence Viewer
	XP_038462284	(Get FASTA)	NCBI Sequence Viewer
	XP_038462285	(Get FASTA)	NCBI Sequence Viewer
	XP_038462287	(Get FASTA)	NCBI Sequence Viewer
	XP_038526963	(Get FASTA)	NCBI Sequence Viewer
	XP_038526964	(Get FASTA)	NCBI Sequence Viewer
	XP_038526965	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000018902.4
	ENSCAFP00000018908.3
	ENSCAFP00030005659.1
	ENSCAFP00040002963.1
	ENSCAFP00040003051.1
	ENSCAFP00845003674
	ENSCAFP00845003674.1
	ENSCAFP00845003691.1

RefSeq Acc Id:	XP_005622446 ⟸ XM_005622389
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0PVR0 (UniProtKB/TrEMBL), A0A8C0R196 (UniProtKB/TrEMBL), A0A8I3MH17 (UniProtKB/TrEMBL), A0A8I3RQU0 (UniProtKB/TrEMBL), A0A8P0SHJ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKTFITSTRQVVRDMKDQMSASSVQALAERKNRQALLGDSG GQNWSTGTTDKYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAVLFVVLLVVLLFFLVL hide sequence

RefSeq Acc Id:	XP_022276635 ⟸ XM_022420927
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0KLE8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKTFITSTRQVVRDMKDQMSASSVQALAERKNRQALLGDSG GQNWSTGTTDKYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSGVVCDAALRSIGPGL hide sequence

RefSeq Acc Id:	XP_022276634 ⟸ XM_022420926
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Q7K6 (UniProtKB/TrEMBL), A0A8C0KLE8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKTFITSTRQVVRDMKDQMSASSVQALAERKNRQALLGDSG GQNWSTGTTDKYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSGQKNILEGERNLPLEFSLFLSNFLRQ VLNMQNWLGFSLESTEAFG hide sequence

Ensembl Acc Id:

ENSCAFP00000044019 ⟸ ENSCAFT00000079417

Ensembl Acc Id:

ENSCAFP00000018902 ⟸ ENSCAFT00000020371

Protein Domains

t-SNARE coiled-coil homology

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000012838	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030003448	UniProtKB/TrEMBL
	ENSCAFG00040001838	UniProtKB/TrEMBL
	ENSCAFG00845002602	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000020371.4	UniProtKB/TrEMBL
	ENSCAFT00000020377.6	UniProtKB/TrEMBL
	ENSCAFT00030006438.1	UniProtKB/TrEMBL
	ENSCAFT00040003459.1	UniProtKB/TrEMBL
	ENSCAFT00040003557.1	UniProtKB/TrEMBL
	ENSCAFT00845004599	ENTREZGENE
	ENSCAFT00845004599.1	UniProtKB/TrEMBL
	ENSCAFT00845004619.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.110	UniProtKB/TrEMBL
	1.20.58.90	UniProtKB/TrEMBL
InterPro	SNARE	UniProtKB/TrEMBL
	Syntaxin-6_N	UniProtKB/TrEMBL
	Syntaxin/epimorphin_CS	UniProtKB/TrEMBL
	T_SNARE_dom	UniProtKB/TrEMBL
KEGG Report	cfa:490303	UniProtKB/TrEMBL
NCBI Gene	STX6	ENTREZGENE
PANTHER	GOLGI SNARE BET1-RELATED	UniProtKB/TrEMBL
Pfam	SNARE	UniProtKB/TrEMBL
	Syntaxin-6_N	UniProtKB/TrEMBL
PROSITE	SYNTAXIN	UniProtKB/TrEMBL
	T_SNARE	UniProtKB/TrEMBL
SMART	t_SNARE	UniProtKB/TrEMBL
Superfamily-SCOP	SNARE fusion complex	UniProtKB/TrEMBL
	SSF47661	UniProtKB/TrEMBL
UniProt	A0A8C0KLE8	ENTREZGENE
	A0A8C0PVR0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Q7K6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R196	ENTREZGENE
	A0A8I3MH17	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RQU0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SHJ8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:55762	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar

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