Symbol:
NT5E
Name:
5'-nucleotidase ecto
RGD ID:
12082040
Description:
ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); ferrous iron binding (ortholog); INVOLVED IN adenosine biosynthetic process (ortholog); adenosine metabolic process (ortholog); AMP catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Brain Injuries (ortholog); Disease Progression (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); synaptic membrane (ortholog); INTERACTS WITH carvedilol
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
5'-nucleotidase
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
NT5E (5'-nucleotidase ecto)
HGNC
EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Nt5e (5' nucleotidase, ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):
Nt5e (5' nucleotidase, ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Nt5e (5'-nucleotidase ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
NT5E (5'-nucleotidase ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Nt5e (5'-nucleotidase ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
NT5E (5'-nucleotidase ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
NT5E (5'-nucleotidase ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Nt5e (5'-nucleotidase ecto)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Latest Assembly:
CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 12 45,491,028 - 45,520,019 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 12 45,491,733 - 45,518,405 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 12 45,289,507 - 45,334,783 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 12 46,244,000 - 46,289,219 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 12 46,243,992 - 46,289,217 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 12 45,577,415 - 45,622,655 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 12 45,506,318 - 45,551,536 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 12 45,693,314 - 45,738,560 (+) NCBI UU_Cfam_GSD_1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - PID (archival)
NT5E (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 12 45,491,028 - 45,520,019 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 12 45,491,733 - 45,518,405 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 12 45,289,507 - 45,334,783 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 12 46,244,000 - 46,289,219 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 12 46,243,992 - 46,289,217 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 12 45,577,415 - 45,622,655 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 12 45,506,318 - 45,551,536 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 12 45,693,314 - 45,738,560 (+) NCBI UU_Cfam_GSD_1.0
NT5E (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 6 85,450,083 - 85,495,784 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 6 85,449,584 - 85,495,791 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 6 86,159,801 - 86,205,502 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 6 86,216,528 - 86,262,215 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 6 86,216,527 - 86,262,215 NCBI Celera 6 86,586,482 - 86,632,679 (+) NCBI Celera Cytogenetic Map 6 q14.3 NCBI HuRef 6 83,383,590 - 83,429,793 (+) NCBI HuRef CHM1_1 6 86,257,244 - 86,303,451 (+) NCBI CHM1_1 T2T-CHM13v2.0 6 86,666,882 - 86,712,587 (+) NCBI T2T-CHM13v2.0
Nt5e (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 9 88,209,662 - 88,254,142 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 9 88,209,250 - 88,254,145 (+) Ensembl GRCm39 Ensembl GRCm38 9 88,327,609 - 88,372,089 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 9 88,327,197 - 88,372,092 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 9 88,222,447 - 88,266,927 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 9 88,125,533 - 88,169,982 (+) NCBI MGSCv36 mm8 Celera 9 85,354,734 - 85,399,137 (+) NCBI Celera Cytogenetic Map 9 E3.1 NCBI cM Map 9 47.24 NCBI
Nt5e (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 98,150,925 - 98,195,646 (+) NCBI GRCr8 mRatBN7.2 8 89,271,046 - 89,314,918 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 89,270,696 - 89,314,881 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 94,940,630 - 94,984,431 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 93,139,844 - 93,183,642 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 90,998,970 - 91,042,930 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 95,969,002 - 96,012,733 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 95,968,652 - 96,012,696 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 95,464,591 - 95,508,322 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 8 93,591,630 - 93,635,481 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 8 93,610,734 - 93,654,911 (+) NCBI Celera 8 88,841,425 - 88,885,302 (+) NCBI Celera Cytogenetic Map 8 q31 NCBI
Nt5e (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955411 12,891,236 - 12,948,406 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955411 12,891,236 - 12,946,324 (+) NCBI ChiLan1.0 ChiLan1.0
NT5E (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 5 105,532,410 - 105,584,140 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 6 103,429,147 - 103,478,675 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 6 83,333,428 - 83,379,585 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 6 86,615,409 - 86,661,594 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 6 86,615,409 - 86,661,601 (+) Ensembl panpan1.1 panPan2
Nt5e (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404946 80,624,771 - 80,673,677 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936510 5,797,212 - 5,846,124 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936510 5,797,218 - 5,846,118 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
NT5E (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 1 54,400,810 - 54,448,742 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 1 54,400,786 - 54,450,743 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 1 60,831,831 - 60,881,527 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
NT5E (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 13 10,115,591 - 10,162,178 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 13 10,116,161 - 10,160,414 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666040 186,303,608 - 186,348,855 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Nt5e (Heterocephalus glaber - naked mole-rat)
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
6
5
5
23
22
16
6
6
6
6
33
22
12
14
10
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSCAFT00000004810 ⟹ ENSCAFP00000004456
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 12 45,491,733 - 45,518,405 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845023054 ⟹ ENSCAFP00845018086
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 12 46,243,992 - 46,289,217 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845023147 ⟹ ENSCAFP00845018148
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 12 46,243,992 - 46,289,217 (+) Ensembl
RefSeq Acc Id:
XM_038492362 ⟹ XP_038348290
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UMICH_Zoey_3.1 12 45,577,415 - 45,622,655 (+) NCBI
RefSeq Acc Id:
XM_038554649 ⟹ XP_038410577
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 12 45,693,314 - 45,738,560 (+) NCBI
RefSeq Acc Id:
XM_038618522 ⟹ XP_038474450
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 12 45,506,318 - 45,551,536 (+) NCBI
RefSeq Acc Id:
XM_038675165 ⟹ XP_038531093
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source Dog10K_Boxer_Tasha 12 45,289,507 - 45,334,783 (+) NCBI
RefSeq Acc Id:
XM_038684083 ⟹ XP_038540011
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 12 46,244,000 - 46,289,219 (+) NCBI
Ensembl Acc Id:
ENSCAFP00000004456 ⟸ ENSCAFT00000004810
RefSeq Acc Id:
XP_038348290 ⟸ XM_038492362
RefSeq Acc Id:
XP_038474450 ⟸ XM_038618522
Ensembl Acc Id:
ENSCAFP00845018086 ⟸ ENSCAFT00845023054
Ensembl Acc Id:
ENSCAFP00845018148 ⟸ ENSCAFT00845023147