IL18BP (interleukin 18 binding protein) - Rat Genome Database

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Gene: IL18BP (interleukin 18 binding protein) Pan paniscus
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Symbol: IL18BP
Name: interleukin 18 binding protein
RGD ID: 11893802
Description: ENCODES a protein that exhibits interleukin-18 binding (inferred); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to tumor necrosis factor (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria type 7b (ortholog); acute promyelocytic leukemia (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2972,947,723 - 72,958,189 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11173,990,062 - 73,994,853 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01167,078,251 - 67,083,043 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11170,302,923 - 70,307,511 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1170,302,923 - 70,307,511 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
IL18BP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2972,947,723 - 72,958,189 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11173,990,062 - 73,994,853 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01167,078,251 - 67,083,043 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11170,302,923 - 70,307,511 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1170,302,923 - 70,307,511 (+)Ensemblpanpan1.1panPan2
IL18BP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381171,998,909 - 72,008,200 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1171,998,613 - 72,007,315 (+)EnsemblGRCh38hg38GRCh38
GRCh371171,709,955 - 71,713,965 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361171,387,606 - 71,391,222 (+)NCBINCBI36Build 36hg18NCBI36
Build 341171,387,586 - 71,394,409NCBI
Celera1169,011,930 - 69,015,547 (+)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1168,003,712 - 68,007,720 (+)NCBIHuRef
CHM1_11171,593,836 - 71,597,844 (+)NCBICHM1_1
T2T-CHM13v2.01171,925,824 - 71,929,835 (+)NCBIT2T-CHM13v2.0
Il18bp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397101,664,281 - 101,669,699 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7101,664,092 - 101,667,897 (-)EnsemblGRCm39 Ensembl
GRCm387102,015,074 - 102,018,232 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7102,014,885 - 102,018,690 (-)EnsemblGRCm38mm10GRCm38
MGSCv377109,163,591 - 109,166,669 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367101,888,898 - 101,891,976 (-)NCBIMGSCv36mm8
Celera7102,389,775 - 102,392,853 (-)NCBICelera
Cytogenetic Map7E2NCBI
cM Map754.71NCBI
Il18bp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81165,784,916 - 165,787,990 (-)NCBIGRCr8
mRatBN7.21156,372,923 - 156,374,963 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,372,883 - 156,374,963 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1164,357,584 - 164,359,622 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01171,537,676 - 171,539,714 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01164,414,831 - 164,416,869 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01167,091,521 - 167,095,727 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1167,091,522 - 167,093,560 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01173,280,367 - 173,282,936 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41159,471,809 - 159,473,288 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11159,550,825 - 159,552,305 (-)NCBI
Celera1154,445,910 - 154,447,949 (-)NCBICelera
Cytogenetic Map1q32NCBI
Il18bp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541419,327,828 - 19,332,577 (-)NCBIChiLan1.0ChiLan1.0
IL18BP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12126,076,515 - 26,080,741 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2126,076,700 - 26,078,612 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2125,846,242 - 25,848,155 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02126,285,296 - 26,289,497 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12126,076,910 - 26,078,821 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02126,292,866 - 26,294,780 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02126,194,784 - 26,196,697 (-)NCBIUU_Cfam_GSD_1.0
Il18bp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494759,754,089 - 59,760,422 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364981,355,749 - 1,361,117 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364981,353,569 - 1,358,312 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL18BP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl96,488,808 - 6,591,333 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.196,586,602 - 6,596,423 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.297,349,721 - 7,353,201 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IL18BP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1163,199,412 - 63,204,615 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl163,200,284 - 63,203,934 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604362,693,855 - 62,699,572 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il18bp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248174,964,403 - 4,965,944 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248174,963,586 - 4,967,122 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000052243   ⟹   ENSPPAP00000029394
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1170,302,923 - 70,307,511 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000052251   ⟹   ENSPPAP00000029402
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1170,304,965 - 70,306,876 (+)Ensembl
RefSeq Acc Id: XM_008968651   ⟹   XP_008966899
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,949,015 - 72,951,759 (+)NCBI
NHGRI_mPanPan11173,991,358 - 73,994,095 (+)NCBI
Mhudiblu_PPA_v01167,079,551 - 67,082,284 (+)NCBI
PanPan1.11170,302,923 - 70,306,754 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008968652   ⟹   XP_008966900
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,947,723 - 72,951,759 (+)NCBI
NHGRI_mPanPan11173,990,062 - 73,994,095 (+)NCBI
Mhudiblu_PPA_v01167,078,251 - 67,082,284 (+)NCBI
PanPan1.11170,302,923 - 70,306,754 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008968654   ⟹   XP_008966902
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,949,026 - 72,952,514 (+)NCBI
NHGRI_mPanPan11173,991,368 - 73,994,853 (+)NCBI
Mhudiblu_PPA_v01167,079,567 - 67,083,043 (+)NCBI
PanPan1.11170,302,923 - 70,307,511 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008968656   ⟹   XP_008966904
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,949,015 - 72,951,759 (+)NCBI
NHGRI_mPanPan11173,991,358 - 73,994,095 (+)NCBI
Mhudiblu_PPA_v01167,079,551 - 67,082,284 (+)NCBI
PanPan1.11170,304,315 - 70,306,754 (+)NCBI
Sequence:
RefSeq Acc Id: XM_057299333   ⟹   XP_057155316
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,949,026 - 72,952,514 (+)NCBI
NHGRI_mPanPan11173,991,368 - 73,994,853 (+)NCBI
RefSeq Acc Id: XM_057299334   ⟹   XP_057155317
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,947,723 - 72,952,514 (+)NCBI
NHGRI_mPanPan11173,990,062 - 73,994,853 (+)NCBI
RefSeq Acc Id: XM_063608651   ⟹   XP_063464721
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,947,723 - 72,958,189 (+)NCBI
RefSeq Acc Id: XM_063608653   ⟹   XP_063464723
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,947,723 - 72,952,514 (+)NCBI
RefSeq Acc Id: XM_063608654   ⟹   XP_063464724
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,947,723 - 72,952,514 (+)NCBI
RefSeq Acc Id: XP_008966902   ⟸   XM_008968654
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BIB6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008966899   ⟸   XM_008968651
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008966900   ⟸   XM_008968652
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008966904   ⟸   XM_008968656
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSPPAP00000029394   ⟸   ENSPPAT00000052243
Ensembl Acc Id: ENSPPAP00000029402   ⟸   ENSPPAT00000052251
RefSeq Acc Id: XP_057155317   ⟸   XM_057299334
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BIB6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_057155316   ⟸   XM_057299333
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BIB6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063464721   ⟸   XM_063608651
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063464723   ⟸   XM_063608653
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BIB6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063464724   ⟸   XM_063608654
- Peptide Label: isoform X3
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037702 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000052243.1 UniProtKB/TrEMBL
  ENSPPAT00000052251.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  IL18BP UniProtKB/TrEMBL
KEGG Report pps:100968242 UniProtKB/TrEMBL
NCBI Gene IL18BP ENTREZGENE
PANTHER INTERLEUKIN-18-BINDING PROTEIN UniProtKB/TrEMBL
  PTHR14292 UniProtKB/TrEMBL
Pfam YLDV-IL18BP-like UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A2R9BIB6 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BLV5_PANPA UniProtKB/TrEMBL