NR5A1 (nuclear receptor subfamily 5 group A member 1) - Rat Genome Database

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Gene: NR5A1 (nuclear receptor subfamily 5 group A member 1) Pan paniscus
Analyze
Symbol: NR5A1
Name: nuclear receptor subfamily 5 group A member 1
RGD ID: 11863641
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); female gonad development (ortholog); hormone-mediated signaling pathway (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); 46, XY Disorders of Sex Development (ortholog); 46,XX sex reversal 4 (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nucleoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: steroidogenic factor 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21114,852,025 - 14,874,137 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1914,854,371 - 14,875,019 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0995,605,282 - 95,628,773 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19124,122,968 - 124,149,292 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9124,122,968 - 124,149,292 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NR5A1Bonobogonadal dysgenesis treatmentISORGD:683509068941 RGDPMID:16467257|REF_RGD_ID:12904919
NR5A1BonoboZellweger syndrome  ISORGD:684939068941DNA:deletions, missense mutations, nonsense mutation: exon:multipleRGDPMID:16141001|REF_RGD_ID:11062374
1 to 15 of 15 rows
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
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Source
Original Reference(s)
NR5A1Bonobo46, XY Disorders of Sex Development  ISORGD:684938554872ClinVar Annotator: match by term: 46,XY disorder of sex developmentClinVarPMID:17694559|PMID:20887963|PMID:25741868|PMID:25989977|PMID:26260161|PMID:27899157|PMID:28492532|PMID:29265478|PMID:30425642|PMID:31513305
NR5A1Bonobo46,XX sex reversal 4  ISORGD:684938554872ClinVar Annotator: match by term: 46,XX sex reversal 4ClinVarPMID:11932325|PMID:22549935|PMID:25741868|PMID:26523528|PMID:27378692|PMID:27490115|PMID:27610946|PMID:27855412|PMID:28033660|PMID:28492532
NR5A1Bonobo46,XY sex reversal 3  ISORGD:684938554872ClinVar Annotator: match by term: 46,XY sex reversal 3 | ClinVar Annotator: match by term: more ...ClinVarPMID:11932325|PMID:15070943|PMID:15472171|PMID:15579739|PMID:17200175|PMID:17576681|PMID:17694559|PMID:18414213|PMID:19246354|PMID:20887963|PMID:21691958|PMID:22028768|PMID:22474171|PMID:22549935|PMID:25122490|PMID:25326637|PMID:25741868|PMID:25989977|PMID:26523528|PMID:27169744|PMID:27378692|PMID:27490115|PMID:27610946|PMID:27855412|PMID:27899157|PMID:28033660|PMID:28492532|PMID:29095814|PMID:29935645|PMID:30425642|PMID:31513305|PMID:31745530|PMID:31852928|PMID:32738419|PMID:33202802|PMID:33351340|PMID:35432193|PMID:35690514|PMID:35935368|PMID:36572623|PMID:38128121|PMID:9536098
NR5A1Bonobodisorder of sexual development  ISORGD:684938554872ClinVar Annotator: match by term: Disorder of sexual differentiationClinVarPMID:25741868|PMID:28492532|PMID:31513305|PMID:31852928|PMID:35432193|PMID:35935368
NR5A1Bonobogenetic disease  ISORGD:684938554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
NR5A1Bonobohereditary breast ovarian cancer syndrome  ISORGD:684938554872ClinVar Annotator: match by term: Genetic non-acquired premature ovarian failureClinVarPMID:25741868|PMID:28492532
NR5A1Bonobohereditary breast ovarian cancer syndrome  ISORGD:684938554872ClinVar Annotator: match by term: Genetic non-acquired premature ovarian failure | ClinVar Annotator: match by more ...ClinVarPMID:22028768|PMID:22907560|PMID:25122490|PMID:25741868|PMID:27169744|PMID:28492532|PMID:30425642
NR5A1Bonobohereditary breast ovarian cancer syndrome  ISORGD:684938554872ClinVar Annotator: match by term: Genetic non-acquired premature ovarian failure | ClinVar Annotator: match by more ...ClinVarPMID:22028768|PMID:22907560|PMID:23154282|PMID:25122490|PMID:25383892|PMID:25741868|PMID:27169744|PMID:28492532
NR5A1Bonobomale infertility  ISORGD:684938554872ClinVar Annotator: match by term: Male infertilityClinVarPMID:17940071|PMID:20887963|PMID:25741868|PMID:25989977|PMID:28492532|PMID:29935645|PMID:30067310|PMID:32655042|PMID:35690514|PMID:36572623
NR5A1Bonoboprimary ovarian insufficiency 16  ISORGD:684938554872ClinVar Annotator: match by term: Genetic non-acquired premature ovarian failureClinVarPMID:22028768|PMID:22907560|PMID:25122490|PMID:25741868|PMID:27169744|PMID:28492532|PMID:30425642
NR5A1Bonoboprimary ovarian insufficiency 7  ISORGD:684938554872ClinVar Annotator: match by term: ADRENAL INSUFFICIENCY, NR5A1-RELATED | ClinVar Annotator: match by term: Premature more ...ClinVarPMID:11038323|PMID:11932325|PMID:17940071|PMID:19246354|PMID:25741868|PMID:26523528|PMID:27855412|PMID:28492532|PMID:30067310|PMID:32655042|PMID:34008892|PMID:36572623
NR5A1Bonobospermatogenic failure 1  ISORGD:684938554872ClinVar Annotator: match by term: Oligosynaptic infertilityClinVarPMID:10369247|PMID:11038323|PMID:12907682|PMID:16199547|PMID:17576681|PMID:17694559|PMID:17940071|PMID:19246354|PMID:19269353|PMID:19439508|PMID:20887963|PMID:22028768|PMID:22100173|PMID:22474171|PMID:22549935|PMID:22907560|PMID:23543655|PMID:23729601|PMID:24591553|PMID:25122490|PMID:25741868|PMID:25989977|PMID:27169744|PMID:27378692|PMID:27490115|PMID:27610946|PMID:27899157|PMID:28032338|PMID:28033660|PMID:28130116|PMID:28326187|PMID:28492532|PMID:28938747|PMID:29027299|PMID:29095814|PMID:29190620|PMID:29265478|PMID:29582157|PMID:29935645|PMID:30067310|PMID:30406445|PMID:30425642|PMID:31513305|PMID:31831369|PMID:32008008|PMID:32655042|PMID:32738419|PMID:32985417|PMID:33351340|PMID:34095689|PMID:34461970|PMID:35690514|PMID:36572623|PMID:36745277|PMID:38128121|PMID:9536098
NR5A1Bonobospermatogenic failure 3  ISORGD:684938554872ClinVar Annotator: match by term: Non-obstructive azoospermiaClinVarPMID:18414213|PMID:20887963|PMID:25741868|PMID:25989977|PMID:28492532|PMID:35690514|PMID:36572623
NR5A1Bonobospermatogenic failure 57  ISORGD:684938554872ClinVar Annotator: match by term: Male infertility with azoospermia or oligozoospermia due to single gene more ...ClinVarPMID:10369247|PMID:11038323|PMID:12907682|PMID:19246354|PMID:20887963|PMID:22100173|PMID:23543655|PMID:25741868|PMID:28492532
NR5A1Bonobospermatogenic failure 8  ISORGD:684938554872ClinVar Annotator: match by term: Spermatogenic failure 8ClinVarPMID:20887963|PMID:25741868|PMID:25989977|PMID:28492532|PMID:35690514|PMID:36572623
1 to 15 of 15 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NR5A1Bonobo46 XX gonadal dysgenesis  ISORGD:684939068941CTD Direct Evidence: marker/mechanismCTDPMID:19246354
NR5A1Bonobo46,XY complete gonadal dysgenesis  ISORGD:684939068941CTD Direct Evidence: marker/mechanismCTDPMID:10369247|PMID:11932325|PMID:15070943
NR5A1BonoboAdrenal Insufficiency  ISORGD:684939068941CTD Direct Evidence: marker/mechanismCTDPMID:10369247
NR5A1Bonoboendometriosis  ISORGD:684939068941CTD Direct Evidence: marker/mechanismCTDPMID:17519303
NR5A1BonoboOvarian Neoplasms  ISORGD:684939068941CTD Direct Evidence: marker/mechanismCTDPMID:23291911
NR5A1Bonoboprimary ovarian insufficiency  ISORGD:684939068941CTD Direct Evidence: marker/mechanismCTDPMID:19246354
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
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Source
Original Reference(s)
NR5A1Bonobohypogonadotropic hypogonadism  ISORGD:684949068941 MouseDO 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NR5A1Bonobo46,XX sex reversal 4  ISORGD:684937240710 OMIM 
NR5A1Bonobo46,XY sex reversal 3  ISORGD:684937240710 OMIM 
NR5A1Bonoboprimary ovarian insufficiency 7  ISORGD:684937240710 OMIM 
NR5A1Bonobospermatogenic failure 8  ISORGD:684937240710 OMIM 


Biological Process
1 to 20 of 33 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
NR5A1Bonoboadrenal gland development acts_upstream_of_or_withinIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonobocalcineurin-mediated signaling  ISORGD:683509068941 RGDPMID:25057110|REF_RGD_ID:12904895
NR5A1Bonobofemale gonad development  ISORGD:683509068941 RGDPMID:12865342|REF_RGD_ID:1598968
NR5A1Bonobofemale gonad development involved_inIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobohormone metabolic process acts_upstream_of_or_withinIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonobohormone-mediated signaling pathway  ISORGD:683509068941 RGDPMID:25057110|REF_RGD_ID:12904895
NR5A1Bonobohormone-mediated signaling pathway involved_inIEAPANTHER:PTN000639691150520179 TreeGrafterGO_REF:0000118
NR5A1Bonobointracellular receptor signaling pathway involved_inIEAGO:0004879150520179 GOCGO_REF:0000108
NR5A1BonoboLeydig cell differentiation acts_upstream_of_or_withinIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonoboluteinization acts_upstream_of_or_withinIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonobomaintenance of protein location in nucleus acts_upstream_of_or_withinIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonobomale gonad development involved_inIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobomale gonad development acts_upstream_of_or_withinIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonobomale sex determination involved_inIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobonegative regulation of female gonad development involved_inIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonobopositive regulation of DNA-templated transcription involved_inISORGD:684949068941 PMID:19301398UniProtPMID:19301398
NR5A1Bonobopositive regulation of DNA-templated transcription acts_upstream_of_or_withinIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1Bonobopositive regulation of gene expression involved_inIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobopositive regulation of male gonad development  ISORGD:683509068941 RGDPMID:16467257|REF_RGD_ID:12904919
NR5A1Bonobopositive regulation of male gonad development involved_inIEAUniProtKB:P33242|UniProtKB:Q13285|ensembl:ENSMUSP00000108504|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
1 to 20 of 33 rows

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
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Term
Qualifier
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Reference
Notes
Source
Original Reference(s)
NR5A1Bonobocytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
NR5A1Bonobocytosol located_inIEAUniProtKB:F1D8R8|UniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobonucleoplasm located_inIEAUniProtKB:F1D8R8|UniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobonucleoplasm located_inIEAARBA:ARBA00026290150520179 UniProtGO_REF:0000117
NR5A1Bonobonucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
NR5A1Bonobonucleus located_inIEAUniProtKB:P33242|UniProtKB:Q13285|ensembl:ENSMUSP00000108504|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobonucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
NR5A1BonoboRNA polymerase II transcription regulator complex part_ofIEAPANTHER:PTN000639691150520179 TreeGrafterGO_REF:0000118
NR5A1BonoboRNA polymerase II transcription regulator complex part_ofIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
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Molecular Function
1 to 20 of 38 rows

  
Object Symbol
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Reference
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Source
Original Reference(s)
NR5A1Bonobochromatin binding enablesIEAUniProtKB:P33242|ensembl:ENSMUSP00000108504150520179 EnsemblGO_REF:0000107
NR5A1BonoboDNA binding enablesIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1BonoboDNA binding enablesIEAInterPro:IPR016355150520179 InterProGO_REF:0000002
NR5A1BonoboDNA binding enablesIEAARBA:ARBA00029224150520179 UniProtGO_REF:0000117
NR5A1BonoboDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
NR5A1BonoboDNA-binding transcription factor activity  ISORGD:683509068941 RGDPMID:12697699|REF_RGD_ID:1624302
NR5A1BonoboDNA-binding transcription factor activity enablesIEAInterPro:IPR001628150520179 InterProGO_REF:0000002
NR5A1BonoboDNA-binding transcription factor activity, RNA polymerase II-specific enablesIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobodouble-stranded DNA binding  ISORGD:683509068941 RGDPMID:12697699|REF_RGD_ID:1624302
NR5A1Bonoboenzyme binding enablesIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobolipid binding enablesIEAUniProtKB-KW:KW-0446150520179 UniProtGO_REF:0000043
NR5A1Bonobometal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
NR5A1Bonobonuclear receptor activity enablesIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonobonuclear receptor activity enablesIEAInterPro:IPR016355150520179 InterProGO_REF:0000002
NR5A1Bonobophospholipid binding enablesIEAUniProtKB:Q13285|ensembl:ENSP00000362690150520179 EnsemblGO_REF:0000107
NR5A1Bonoboprotein binding enablesISOUniProtKB:P369569068941 PMID:23610160ParkinsonsUK-UCLPMID:23610160
NR5A1Bonoboprotein binding enablesISOPR:Q99ME79068941 PMID:12651892MGIPMID:12651892
NR5A1Bonoboprotein binding enablesISOPR:Q04886|PR:Q048879068941 PMID:12732652MGIPMID:12732652
NR5A1Bonoboprotein binding enablesISOPR:P237089068941 PMID:12730328MGIPMID:12730328
NR5A1Bonoboprotein binding enablesISOUniProtKB:P163339068941 PMID:17474147, PMID:39009827IntActPMID:17474147|PMID:39009827
1 to 20 of 38 rows

PMID:22301074   PMID:30032202  



NR5A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21114,852,025 - 14,874,137 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1914,854,371 - 14,875,019 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0995,605,282 - 95,628,773 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19124,122,968 - 124,149,292 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9124,122,968 - 124,149,292 (-)Ensemblpanpan1.1panPan2
NR5A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389124,481,236 - 124,507,399 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9124,481,236 - 124,507,420 (-)EnsemblGRCh38hg38GRCh38
GRCh379127,243,515 - 127,269,678 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369126,283,336 - 126,309,520 (-)NCBINCBI36Build 36hg18NCBI36
Build 349124,323,069 - 124,349,253NCBI
Celera997,890,732 - 97,916,915 (-)NCBICelera
Cytogenetic Map9q33.3NCBI
HuRef996,856,059 - 96,882,213 (-)NCBIHuRef
CHM1_19127,392,508 - 127,418,653 (-)NCBICHM1_1
T2T-CHM13v2.09136,679,465 - 136,705,624 (-)NCBIT2T-CHM13v2.0
Nr5a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39238,582,668 - 38,604,554 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl238,582,668 - 38,604,554 (-)EnsemblGRCm39 Ensembl
GRCm38238,692,656 - 38,714,542 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl238,692,656 - 38,714,542 (-)EnsemblGRCm38mm10GRCm38
MGSCv37238,548,180 - 38,570,062 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36238,514,636 - 38,536,512 (-)NCBIMGSCv36mm8
Celera240,416,849 - 40,438,726 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map224.42NCBI
Nr5a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8342,874,505 - 42,896,109 (-)NCBIGRCr8
mRatBN7.2322,464,786 - 22,486,328 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl322,465,502 - 22,486,328 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx325,933,801 - 25,954,690 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0334,518,798 - 34,539,688 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0332,331,170 - 32,351,980 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0322,998,900 - 23,020,441 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl322,999,616 - 23,020,441 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0328,223,427 - 28,244,968 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4318,498,913 - 18,519,738 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1318,395,933 - 18,412,441 (-)NCBI
Celera320,898,726 - 20,919,551 (-)NCBICelera
Cytogenetic Map3q12NCBI
Nr5a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554193,632,220 - 3,654,375 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554193,632,248 - 3,654,367 (+)NCBIChiLan1.0ChiLan1.0
Nr5a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947192,970,909 - 193,007,215 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648712,739,439 - 12,763,734 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648712,739,445 - 12,763,729 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR5A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1265,284,493 - 265,311,417 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11265,284,491 - 265,311,547 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21299,123,683 - 299,135,326 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap1q210-q211NCBI
NR5A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11213,640,453 - 13,666,748 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1213,640,473 - 13,666,863 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660792,411,630 - 2,438,042 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nr5a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476010,605,877 - 10,626,386 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476010,603,504 - 10,626,259 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.
RefSeq Transcripts XM_034929032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000044039   ⟹   ENSPPAP00000021239
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9124,122,968 - 124,149,292 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000044044   ⟹   ENSPPAP00000021243
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9124,124,445 - 124,145,123 (-)Ensembl
RefSeq Acc Id: XM_034929032   ⟹   XP_034784923
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21114,852,025 - 14,874,137 (+)NCBI
NHGRI_mPanPan1914,854,371 - 14,875,019 (+)NCBI
Mhudiblu_PPA_v0995,605,282 - 95,628,773 (-)NCBI
Protein RefSeqs XP_034784923 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000021239.1
  ENSPPAP00000021243.1
RefSeq Acc Id: XP_034784923   ⟸   XM_034929032
- UniProtKB: A0A2R9B1E3 (UniProtKB/TrEMBL),   A0A2R9AVM2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000021239   ⟸   ENSPPAT00000044039
Ensembl Acc Id: ENSPPAP00000021243   ⟸   ENSPPAT00000044044
NR LBD   Nuclear receptor



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Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000033832 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000044039.1 UniProtKB/TrEMBL
  ENSPPAT00000044044.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/TrEMBL
InterPro NHR-like_dom_sf UniProtKB/TrEMBL
  NR5_fam UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/TrEMBL
NCBI Gene NR5A1 ENTREZGENE
PANTHER PTHR24086 UniProtKB/TrEMBL
  STEROIDOGENIC FACTOR 1 UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/TrEMBL
  zf-C4 UniProtKB/TrEMBL
PIRSF Nuc_orph_FTZ-F1 UniProtKB/TrEMBL
PRINTS STRDHORMONER UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/TrEMBL
SMART HOLI UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/TrEMBL
  SSF48508 UniProtKB/TrEMBL
UniProt A0A2R9AVM2 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B1E3 ENTREZGENE, UniProtKB/TrEMBL
1 to 28 of 28 rows