CS (citrate synthase) - Rat Genome Database

Name: CS
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: CS (citrate synthase) Pan paniscus

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Symbol:

Name:

citrate synthase

RGD ID:

11775295

Description:

ENCODES a protein that exhibits citrate (Si)-synthase activity (ortholog); citrate synthase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); citrate metabolic process (ortholog); heart development (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH atrial fibrillation (ortholog); bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN mitochondrial matrix (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

citrate synthase, mitochondrial

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CS (citrate synthase)	NCBI	Ortholog
Mus musculus (house mouse):	Cs (citrate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cs (citrate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cs (citrate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CS (citrate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cs (citrate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CS (citrate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CS (citrate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	38,028,323 - 38,060,438 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	38,028,468 - 38,057,206 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	32,614,982 - 32,643,719 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	32,867,225 - 32,895,854 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	32,867,225 - 32,895,854 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atrial fibrillation (ISO)

bipolar disorder (ISO)

Brain Hypoxia-Ischemia (ISO)

Cardiomegaly (ISO)

cardiomyopathy (ISO)

Chronic Allograft Nephropathy (ISO)

congestive heart failure (ISO)

dilated cardiomyopathy (ISO)

Endotoxemia (ISO)

Experimental Diabetes Mellitus (ISO)

hyperthyroidism (ISO)

hypertrophic cardiomyopathy (ISO)

hypothyroidism (ISO)

Hypoxia (ISO)

limb ischemia (ISO)

Liver Reperfusion Injury (ISO)

myocardial infarction (ISO)

obesity (ISO)

Sepsis (ISO)

Ventricular Dysfunction, Left (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acetyl-CoA metabolic process (ISO)

carbohydrate metabolic process (IEA)

citrate metabolic process (IEA,ISO)

heart development (ISO)

oxaloacetate metabolic process (ISO)

tricarboxylic acid cycle (IEA,ISO)

Cellular Component

mitochondrial matrix (IEA,ISO)

mitochondrion (IEA)

Molecular Function

acyltransferase activity, acyl groups converted into alkyl on transfer (IEA)

citrate (Si)-synthase activity (IEA,ISO)

citrate synthase activity (ISO)

identical protein binding (IEA)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

citric acid cycle pathway (ISO)

fumaric aciduria pathway (ISO)

mitochondrial complex II deficiency pathway (ISO)

pyruvate dehydrogenase E2 deficiency pathway (ISO)

pyruvate dehydrogenase E3 deficiency pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CS
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	38,028,323 - 38,060,438 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	38,028,468 - 38,057,206 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	32,614,982 - 32,643,719 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	32,867,225 - 32,895,854 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	32,867,225 - 32,895,854 (+)	Ensembl	panpan1.1		panPan2

CS
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	56,271,699 - 56,300,330 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	56,271,699 - 56,300,391 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	56,665,483 - 56,694,114 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	54,951,750 - 54,980,442 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	12	56,318,264 - 56,346,961 (-)	NCBI		Celera
Cytogenetic Map	12	q13.3	NCBI
HuRef	12	53,704,180 - 53,732,652 (-)	NCBI		HuRef
CHM1_1	12	56,632,888 - 56,661,575 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	56,239,343 - 56,267,970 (-)	NCBI		T2T-CHM13v2.0

Cs
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	128,173,596 - 128,198,351 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	128,173,603 - 128,198,348 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	128,337,727 - 128,362,482 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	128,337,734 - 128,362,479 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	127,774,888 - 127,799,535 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	127,740,781 - 127,765,428 (+)	NCBI		MGSCv36	mm8
Celera	10	130,726,084 - 130,750,750 (+)	NCBI		Celera
Cytogenetic Map	10	D3	NCBI
cM Map	10	76.53	NCBI

Cs
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	1,348,389 - 1,374,624 (+)	NCBI		GRCr8
mRatBN7.2	7	758,074 - 791,421 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	758,345 - 791,421 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	3,522,514 - 3,550,877 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	5,398,497 - 5,426,861 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	5,698,983 - 5,725,551 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	2,752,680 - 2,778,963 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	2,752,680 - 2,778,963 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	2,731,092 - 2,757,427 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	1,626,181 - 1,652,197 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	1,626,180 - 1,652,197 (+)	NCBI
Celera	7	639,242 - 663,715 (+)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

Cs
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	3,881,798 - 3,893,401 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955458	3,881,798 - 3,913,044 (-)	NCBI	ChiLan1.0	ChiLan1.0

CS
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	584,000 - 611,351 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	584,904 - 611,436 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	647,257 - 674,790 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	592,484 - 620,012 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	592,484 - 620,005 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	569,926 - 597,448 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	812,910 - 840,419 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	937,007 - 964,321 (-)	NCBI		UU_Cfam_GSD_1.0

Cs
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	58,165,176 - 58,193,309 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936646	678,307 - 692,777 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936646	676,926 - 704,988 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CS
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	21,666,585 - 21,700,711 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	21,669,778 - 21,700,737 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	23,162,491 - 23,186,518 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	5	p12-p13	NCBI

CS
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	52,224,667 - 52,253,552 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	52,222,724 - 52,253,307 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	193,729,868 - 193,761,327 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003824917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008978601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008978602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000050289 ⟹ ENSPPAP00000027449

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	12	32,867,225 - 32,895,854 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000050296 ⟹ ENSPPAP00000027456

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	12	32,876,893 - 32,894,464 (+)	Ensembl

RefSeq Acc Id:

XM_003824917 ⟹ XP_003824965

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	38,028,323 - 38,060,438 (+)	NCBI
NHGRI_mPanPan1	12	38,028,468 - 38,057,206 (+)	NCBI
Mhudiblu_PPA_v0	12	32,614,982 - 32,643,719 (+)	NCBI
PanPan1.1	12	32,867,225 - 32,895,854 (+)	NCBI

Sequence:

show sequence

GGCGGGGCCTCCTTGAGGACCCCGGGCTGGGCGCCGCCGCCGGTTCGTCTACTCTTTCCCTCAG
CCGCCTCCTTTCAACCTTGTCAACCCGTCGGCGCGGCCTCTGGTGCAGCGGCGGCGGCTCCTGT
TCCTGCCGCAGCTCTCTCCCTTTCTTACCTCCCCACCAGATCCCGGAGATCGCCCGCCATGGCT
TTACTTACTGCGGCCGCCCGGCTCTTGGGAACTAAGAATGCATCTTGTCTTGTTCTTGCAGCCC
GGCATGCCAGTGCTTCCTCCACGAATTTGAAAGACATATTGGCTGACCTGATACCTAAGGAGCA
GGCCAGAATTAAGACCTTCAGGCAGCAACATGGCAAGACGGTGGTGGGCCAAATCACTGTGGAC
ATGATGTATGGTGGCATGAGAGGCATGAAGGGATTGGTCTATGAAACATCAGTTCTTGATCCTG
ATGAGGGCATCCGTTTCCGAGGCTTTAGTATCCCTGAATGCCAGAAACTGCTACCCAAGGCTAA
GGGTGGGGAAGAACCCCTGCCTGAGGGCTTATTTTGGCTGCTGGTAACTGGACATATCCCAACA
GAGGAACAGGTATCTTGGCTCTCAAAAGAGTGGGCAAAGAGGGCAGCTCTGCCTTCCCATGTGG
TCACTATGCTGGACAACTTTCCCACCAATCTACACCCCATGTCTCAGCTCAGTGCAGCTGTTAC
AGCCCTCAACAGTGAAAGTAACTTTGCCCGAGCATATGCACAGGGTATCAGCCGAACCAAGTAC
TGGGAGTTGATTTATGAAGACTCTATGGATCTAATCGCAAAGCTACCTTGTGTTGCAGCAAAGA
TCTACCGAAATCTCTACAGAGAAGGCAGCGGTATTGGGGCCATTGACTCTAACCTGGACTGGTC
TCACAATTTCACCAACATGTTAGGCTATACTGATCATCAGTTCACTGAGCTCATGCGCCTGTAC
CTCACCATCCACAGTGACCATGAGGGCGGCAATGTAAGTGCCCATACCAGCCATTTGGTGGGCA
GTGCCCTTTCCGACCCTTACCTGTCCTTTGCAGCAGCCATGAACGGGCTGGCAGGGCCTCTCCA
TGGACTGGCAAATCAGGAAGTGCTTGTCTGGCTAACACAGCTGCAGAAGGAAGTTGGCAAAGAT
GTGTCAGATGAGAAGTTACGAGACTACATCTGGAACACACTCAACTCGGGACGGGTTGTTCCAG
GCTATGGCCATGCAGTACTAAGGAAGACTGATCCGCGATATACCTGTCAGCGAGAGTTTGCTCT
GAAACACCTGCCTAATGACCCCATGTTTAAGTTGGTTGCTCAGCTGTACAAGATTGTGCCTAAT
GTCCTCTTAGAGCAGGGTAAAGCCAAGAATCCTTGGCCCAATGTAGATGCTCACAGTGGGGTGC
TGCTCCAGTATTATGGCATGACGGAGATGAATTACTACACGGTCCTGTTTGGGGTGTCACGAGC
ATTGGGTGTACTGGCACAGCTCATCTGGAGCCGAGCCTTAGGCTTCCCTCTAGAAAGGCCCAAG
TCCATGAGCACAGAGGGTCTGATGAAGTTTGTGGACTCTAAGTCAGGGTAAAACTGGAGACTGG
GTGAAAGTGACTACCAGAAAGTGAGGAAGCCTAAATAAAAAGTATACCTTTGTTTCAGGGGGCC
TTTAAAGACTTAAGATTAAATTATATCTGAGGCACTGATAATATGTTTGAGGTTAAAATATAAA
TTAAGACTTTAAAAGATGAAAAATGGTCCTTCTTCCCTAATCAGCTCCCTTCCCCTGCCTGGTA
TGAGTTGCCCATCATAGGCATGGTCCTGGAGGATGACCAGGACTAATGCATGTGGTATGAGTAG
GTTTGGCCCCCTCACTATCTCTAGAGTGAGAATCTGGCTCCTGTTTCCATGGGTCAAAGCCGGT
TGCAGAGAATCTGCAGTCACTTTGGAGCTTTAGCTTCTCTGCCAAGCCCTCAATAAGCCAGCAA
ACCAGGACTCTGCCCCTTCTGTTTCCATAGGAATCATGTTGGATAGTCAGCTGTACCAAGCCCC
CTTGGCCCTCTCCCATGCACACAAACACCTCCTAGCAAGACCTGTTGGTTAGCTGGACATGCTT
TGGCAATTTTTTTATACTACCAAGTGACCATAAAGGCATGGCATTTGTTGTGACTGGCACCCAA
TGTTTGATTTTTTTTTTAAACTATCCAATTAAAATTAAGGTCTGGGAGTGTTCTGTTTCCCATT
ACTTTAATACTCACCTCCTCCCAGACTTTCTACACCTGTTGCACCTCAGGCTGAGGATGTTCTG
GACCTCCCCCTCTTGGTCCCTACTAGAGACCTCTCAACAGATCTGTGGGCCCAGTCATTGGGTT
TTATCAGTGCTTAATGTGAACTAAGTTTTTTACTTCCACAGAATACAAGCCACTACCTTCTGAC
CTCCCCACCCCCCACCAACCCCCATCTTTTAATATGCTGTGGGGCATAGAACAGGGACTCCGGA
ATGACCAGCATGATATTTTCAGAGTCTTGTCCCTGGGGTATTAGCACCTCTTTTTGAACAGGGA
ATTGATTCAAGATTGGACATGGTCTCCTCTGATTATCAGGTACTGGGGCTGAGGGCATTAAAAA
TAGTAAGCCTCCCTCCTCGTCCCCTGCCTCAAGAAATTGCCTCCTTATTTATCAACATCTTTTT
CCTCCCTTTCCCTGAGAGCTCACAGTACAATGTTTCAGAAGCCCCATTTGCACAGGTTTTCAGC
AACTCAGAATGCTCTACTTCTTTTTCTTTGAGAAAGGATTAAGATACACTCCTGCTGTGCCCCC
ATCTTTCCTCCAAACTCCTGCCTGTGTTTGTGTGGATACCCAGTCCCAGAACCACACTGTTGAG
TTGGACACACTGTAAACCCCTGGGTAACTGTCAAGTCATGATGCAGACTTCAGGTTGTTCTGTA
TAAAATGCAAAATAAATGTTTTTATTAACAATG

hide sequence

RefSeq Acc Id:

XM_008978602 ⟹ XP_008976850

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	38,031,926 - 38,060,438 (+)	NCBI
NHGRI_mPanPan1	12	38,028,848 - 38,057,206 (+)	NCBI
Mhudiblu_PPA_v0	12	32,615,360 - 32,643,719 (+)	NCBI
PanPan1.1	12	32,868,929 - 32,895,852 (+)	NCBI

Sequence:

show sequence

CAGTGGCAAGTACTAGCTGAGCATTTGGGAGATGCTTGTCTTACTTGGCTGTTGCTTCTCCTGC
TGCTGGGGAAAAGGAATGCATCTTGTCTTGTTCTTGCAGCCCGGCATGCCAGTGCTTCCTCCAC
GAATTTGAAAGACATATTGGCTGACCTGATACCTAAGGAGCAGGCCAGAATTAAGACCTTCAGG
CAGCAACATGGCAAGACGGTGGTGGGCCAAATCACTGTGGACATGATGTATGGTGGCATGAGAG
GCATGAAGGGATTGGTCTATGAAACATCAGTTCTTGATCCTGATGAGGGCATCCGTTTCCGAGG
CTTTAGTATCCCTGAATGCCAGAAACTGCTACCCAAGGCTAAGGGTGGGGAAGAACCCCTGCCT
GAGGGCTTATTTTGGCTGCTGGTAACTGGACATATCCCAACAGAGGAACAGGTATCTTGGCTCT
CAAAAGAGTGGGCAAAGAGGGCAGCTCTGCCTTCCCATGTGGTCACTATGCTGGACAACTTTCC
CACCAATCTACACCCCATGTCTCAGCTCAGTGCAGCTGTTACAGCCCTCAACAGTGAAAGTAAC
TTTGCCCGAGCATATGCACAGGGTATCAGCCGAACCAAGTACTGGGAGTTGATTTATGAAGACT
CTATGGATCTAATCGCAAAGCTACCTTGTGTTGCAGCAAAGATCTACCGAAATCTCTACAGAGA
AGGCAGCGGTATTGGGGCCATTGACTCTAACCTGGACTGGTCTCACAATTTCACCAACATGTTA
GGCTATACTGATCATCAGTTCACTGAGCTCATGCGCCTGTACCTCACCATCCACAGTGACCATG
AGGGCGGCAATGTAAGTGCCCATACCAGCCATTTGGTGGGCAGTGCCCTTTCCGACCCTTACCT
GTCCTTTGCAGCAGCCATGAACGGGCTGGCAGGGCCTCTCCATGGACTGGCAAATCAGGAAGTG
CTTGTCTGGCTAACACAGCTGCAGAAGGAAGTTGGCAAAGATGTGTCAGATGAGAAGTTACGAG
ACTACATCTGGAACACACTCAACTCGGGACGGGTTGTTCCAGGCTATGGCCATGCAGTACTAAG
GAAGACTGATCCGCGATATACCTGTCAGCGAGAGTTTGCTCTGAAACACCTGCCTAATGACCCC
ATGTTTAAGTTGGTTGCTCAGCTGTACAAGATTGTGCCTAATGTCCTCTTAGAGCAGGGTAAAG
CCAAGAATCCTTGGCCCAATGTAGATGCTCACAGTGGGGTGCTGCTCCAGTATTATGGCATGAC
GGAGATGAATTACTACACGGTCCTGTTTGGGGTGTCACGAGCATTGGGTGTACTGGCACAGCTC
ATCTGGAGCCGAGCCTTAGGCTTCCCTCTAGAAAGGCCCAAGTCCATGAGCACAGAGGGTCTGA
TGAAGTTTGTGGACTCTAAGTCAGGGTAAAACTGGAGACTGGGTGAAAGTGACTACCAGAAAGT
GAGGAAGCCTAAATAAAAAGTATACCTTTGTTTCAGGGGGCCTTTAAAGACTTAAGATTAAATT
ATATCTGAGGCACTGATAATATGTTTGAGGTTAAAATATAAATTAAGACTTTAAAAGATGAAAA
ATGGTCCTTCTTCCCTAATCAGCTCCCTTCCCCTGCCTGGTATGAGTTGCCCATCATAGGCATG
GTCCTGGAGGATGACCAGGACTAATGCATGTGGTATGAGTAGGTTTGGCCCCCTCACTATCTCT
AGAGTGAGAATCTGGCTCCTGTTTCCATGGGTCAAAGCCGGTTGCAGAGAATCTGCAGTCACTT
TGGAGCTTTAGCTTCTCTGCCAAGCCCTCAATAAGCCAGCAAACCAGGACTCTGCCCCTTCTGT
TTCCATAGGAATCATGTTGGATAGTCAGCTGTACCAAGCCCCCTTGGCCCTCTCCCATGCACAC
AAACACCTCCTAGCAAGACCTGTTGGTTAGCTGGACATGCTTTGGCAATTTTTTTATACTACCA
AGTGACCATAAAGGCATGGCATTTGTTGTGACTGGCACCCAATGTTTGATTTTTTTTTTAAACT
ATCCAATTAAAATTAAGGTCTGGGAGTGTTCTGTTTCCCATTACTTTAATACTCACCTCCTCCC
AGACTTTCTACACCTGTTGCACCTCAGGCTGAGGATGTTCTGGACCTCCCCCTCTTGGTCCCTA
CTAGAGACCTCTCAACAGATCTGTGGGCCCAGTCATTGGGTTTTATCAGTGCTTAATGTGAACT
AAGTTTTTTACTTCCACAGAATACAAGCCACTACCTTCTGACCTCCCCACCCCCCACCAACCCC
CATCTTTTAATATGCTGTGGGGCATAGAACAGGGACTCCGGAATGACCAGCATGATATTTTCAG
AGTCTTGTCCCTGGGGTATTAGCACCTCTTTTTGAACAGGGAATTGATTCAAGATTGGACATGG
TCTCCTCTGATTATCAGGTACTGGGGCTGAGGGCATTAAAAATAGTAAGCCTCCCTCCTCGTCC
CCTGCCTCAAGAAATTGCCTCCTTATTTATCAACATCTTTTTCCTCCCTTTCCCTGAGAGCTCA
CAGTACAATGTTTCAGAAGCCCCATTTGCACAGGTTTTCAGCAACTCAGAATGCTCTACTTCTT
TTTCTTTGAGAAAGGATTAAGATACACTCCTGCTGTGCCCCCATCTTTCCTCCAAACTCCTGCC
TGTGTTTGTGTGGATACCCAGTCCCAGAACCACACTGTTGAGTTGGACACACTGTAAACCCCTG
GGTAACTGTCAAGTCATGATGCAGACTTCAGGTTGTTCTGTATAAAATGCAAAATAAATGTTTT
TATTAACAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003824965	(Get FASTA)	NCBI Sequence Viewer
	XP_008976850	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000027449
	ENSPPAP00000027449.1
	ENSPPAP00000027456.1

RefSeq Acc Id:	XP_003824965 ⟸ XM_003824917
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9BCW0 (UniProtKB/TrEMBL), A0A2R9BGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALLTAAARLLGTKNASCLVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKTVVGQIT VDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTGHI PTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESNFARAYAQGISRT KYWELIYEDSMDLIAKLPCVAAKIYRNLYREGSGIGAIDSNLDWSHNFTNMLGYTDHQFTELMR LYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTQLQKEVG KDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIV PNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLER PKSMSTEGLMKFVDSKSG hide sequence

RefSeq Acc Id:	XP_008976850 ⟸ XM_008978602
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTGHIPT EEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESNFARAYAQGISRTKY WELIYEDSMDLIAKLPCVAAKIYRNLYREGSGIGAIDSNLDWSHNFTNMLGYTDHQFTELMRLY LTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTQLQKEVGKD VSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPN VLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPK SMSTEGLMKFVDSKSG hide sequence

Ensembl Acc Id:

ENSPPAP00000027449 ⟸ ENSPPAT00000050289

Ensembl Acc Id:

ENSPPAP00000027456 ⟸ ENSPPAT00000050296

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000036762	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000050289.1	UniProtKB/TrEMBL
	ENSPPAT00000050296.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.230.10	UniProtKB/TrEMBL
	1.10.580.10	UniProtKB/TrEMBL
InterPro	Citrate_synth-like_lrg_a-sub	UniProtKB/TrEMBL
	Citrate_synth-like_sm_a-sub	UniProtKB/TrEMBL
	Citrate_synthase	UniProtKB/TrEMBL
	Citrate_synthase_AS	UniProtKB/TrEMBL
	Citrate_synthase_euk	UniProtKB/TrEMBL
	Citrate_synthase_sf	UniProtKB/TrEMBL
KEGG Report	pps:100972419	UniProtKB/TrEMBL
NCBI Gene	CS	ENTREZGENE
PANTHER	CITRATE SYNTHASE, MITOCHONDRIAL	UniProtKB/TrEMBL
	PTHR11739	UniProtKB/TrEMBL
Pfam	Citrate_synt	UniProtKB/TrEMBL
PRINTS	CITRTSNTHASE	UniProtKB/TrEMBL
PROSITE	CITRATE_SYNTHASE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48256	UniProtKB/TrEMBL
UniProt	A0A2R9BCW0	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BGP8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB