SETD5 (SET domain containing 5) - Rat Genome Database

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Gene: SETD5 (SET domain containing 5) Pan paniscus
Analyze
Symbol: SETD5
Name: SET domain containing 5
RGD ID: 11756417
Description: ENCODES a protein that exhibits histone H3 methyltransferase activity (ortholog); INVOLVED IN chromatin organization (inferred); chromatin remodeling (inferred); cognition (inferred); ASSOCIATED WITH 3p deletion syndrome (ortholog); Atrioventricular Septal Defect 2 (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (inferred); euchromatin (inferred); nucleoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: histone-lysine N-methyltransferase SETD5; SET domain-containing protein 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan139,414,169 - 9,495,101 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v039,350,026 - 9,430,760 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.139,592,517 - 9,672,306 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl39,592,517 - 9,672,306 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
1 to 15 of 15 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SETD5Bonobo3p deletion syndrome  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: 3p- syndromeClinVarPMID:21681106
SETD5BonoboAtrioventricular Septal Defect 2  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: Atrioventricular septal defect more ...ClinVarPMID:28492532
SETD5Bonoboautism spectrum disorder  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: Autism spectrum disorderClinVarPMID:25741868
SETD5Bonoboautosomal dominant intellectual developmental disorder 23  ISOSETD5 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:16199547 more ...
SETD5BonoboDevelopmental Disabilities  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: Global developmental delayClinVarPMID:25741868
SETD5BonoboDevelopmental Disease  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental disorderClinVarPMID:25741868 and PMID:28492532
SETD5Bonobogenetic disease  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:23020937 more ...
SETD5Bonobohyperphosphatasia with impaired intellectual development syndrome 4  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: HYPERPHOSPHATASIA WITH IMPAIRED INTELLECTUAL DEVELOPMENT SYNDROME 4ClinVar 
SETD5Bonobointellectual disability  ISOSETD5 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 more ...
SETD5BonoboKBG syndrome  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: KBG syndromeClinVar 
SETD5Bonobolong QT syndrome  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: Long QT syndromeClinVarPMID:28492532
SETD5Bonobomicrocephaly  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: MicrocephalyClinVarPMID:25741868 and PMID:28492532
SETD5BonoboNATURAL KILLER CELL ENTEROPATHY  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: NK-cell enteropathyClinVar 
SETD5BonoboNeurodevelopmental Disorders  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:23020937 more ...
SETD5Bonobopolymicrogyria  ISOSETD5 (Homo sapiens)8554872ClinVar Annotator: match by term: PolymicrogyriaClinVarPMID:32581362
1 to 15 of 15 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SETD5Bonoboautosomal dominant intellectual developmental disorder 23  ISOSETD5 (Homo sapiens)7240710 OMIM 


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SETD5Bonobochromatin organization involved_inIEAUniProtKB-KW:KW-0156150520179 UniProtGO_REF:0000043
SETD5Bonobochromatin remodeling involved_inIEAGO:0046975150520179 GOCGO_REF:0000108
SETD5Bonobocognition involved_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107
SETD5Bonobonegative regulation of transcription by RNA polymerase III involved_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107
SETD5Bonoboregulation of chromatin organization involved_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107
SETD5Bonoboregulation of DNA-templated transcription involved_inIEAPANTHER:PTN002925079150520179 TreeGrafterGO_REF:0000118
SETD5Bonoboregulation of DNA-templated transcription elongation involved_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107
SETD5Bonoboregulation of synapse assembly involved_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SETD5Bonobochromatin located_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107
SETD5Bonoboeuchromatin located_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107
SETD5Bonobonucleoplasm located_inIEAUniProtKB:Q9C0A6 and ensembl:ENSP00000385852150520179 EnsemblGO_REF:0000107
SETD5Bonobonucleus located_inIEAUniProtKB:Q5XJV7 and ensembl:ENSMUSP00000108782150520179 EnsemblGO_REF:0000107
SETD5BonoboRpd3L-Expanded complex part_ofIEAPANTHER:PTN002925079150520179 TreeGrafterGO_REF:0000118
SETD5BonoboSet3 complex part_ofIEAPANTHER:PTN002925079150520179 TreeGrafterGO_REF:0000118

Molecular Function

  

PMID:30032202  



SETD5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan139,414,169 - 9,495,101 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v039,350,026 - 9,430,760 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.139,592,517 - 9,672,306 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl39,592,517 - 9,672,306 (+)Ensemblpanpan1.1panPan2
SETD5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3839,397,615 - 9,478,154 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl39,397,615 - 9,479,240 (+)EnsemblGRCh38hg38GRCh38
GRCh3739,439,299 - 9,519,838 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3639,414,403 - 9,494,838 (+)NCBINCBI36Build 36hg18NCBI36
Celera39,374,104 - 9,454,540 (+)NCBICelera
Cytogenetic Map3p25.3NCBI
HuRef39,376,157 - 9,456,594 (+)NCBIHuRef
CHM1_139,389,634 - 9,470,072 (+)NCBICHM1_1
T2T-CHM13v2.039,389,553 - 9,470,070 (+)NCBIT2T-CHM13v2.0
Setd5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396113,054,326 - 113,130,393 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6113,054,326 - 113,130,396 (+)EnsemblGRCm39 Ensembl
GRCm386113,077,262 - 113,153,432 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6113,077,365 - 113,153,435 (+)EnsemblGRCm38mm10GRCm38
MGSCv376113,027,633 - 113,103,418 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366113,043,416 - 113,119,201 (+)NCBIMGSCv36mm8
Celera6114,906,553 - 114,982,234 (+)NCBICelera
Cytogenetic Map6E3NCBI
cM Map652.73NCBI
Setd5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84147,772,955 - 147,850,669 (+)NCBIGRCr8
mRatBN7.24146,217,172 - 146,294,896 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4146,217,180 - 146,294,894 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4151,601,552 - 151,679,175 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04147,382,364 - 147,459,988 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04146,003,773 - 146,081,375 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04145,017,549 - 145,095,247 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4145,017,608 - 145,095,245 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04208,315,923 - 208,393,604 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44148,949,819 - 149,027,459 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14149,194,804 - 149,272,302 (+)NCBI
Celera4134,776,438 - 134,854,033 (+)NCBICelera
Cytogenetic Map4q42NCBI
Setd5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955561968,814 - 1,042,691 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955561968,814 - 1,091,687 (+)NCBIChiLan1.0ChiLan1.0
SETD5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1208,681,714 - 8,766,013 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl208,683,738 - 8,732,674 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha208,714,249 - 8,798,399 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0208,711,279 - 8,795,473 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl208,713,184 - 8,795,592 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1208,433,002 - 8,517,373 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0208,778,660 - 8,862,780 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0208,751,943 - 8,836,101 (-)NCBIUU_Cfam_GSD_1.0
Setd5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494215,255,510 - 15,330,661 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366023,577,525 - 3,654,269 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366023,577,543 - 3,654,179 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SETD5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1365,759,987 - 65,850,506 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11365,759,973 - 65,851,747 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21372,888,860 - 72,927,219 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SETD5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12245,391,871 - 45,475,183 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2245,430,660 - 45,475,217 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041121,083,848 - 121,167,211 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Setd5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247314,098,091 - 4,172,555 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247314,098,137 - 4,170,889 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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1 to 30 of 43 rows
RefSeq Transcripts XM_003814230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024928321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034955712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 43 rows

Ensembl Acc Id: ENSPPAT00000059208   ⟹   ENSPPAP00000036316
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl39,592,517 - 9,672,306 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000059220   ⟹   ENSPPAP00000036328
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl39,592,517 - 9,672,288 (+)Ensembl
RefSeq Acc Id: XM_003814230   ⟹   XP_003814278
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,169 - 9,495,101 (+)NCBI
Mhudiblu_PPA_v039,350,026 - 9,430,760 (+)NCBI
PanPan1.139,592,517 - 9,672,306 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008966841   ⟹   XP_008965089
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,282 - 9,495,101 (+)NCBI
Mhudiblu_PPA_v039,350,135 - 9,430,328 (+)NCBI
PanPan1.139,592,517 - 9,672,294 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008966850   ⟹   XP_008965098
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,233 - 9,495,101 (+)NCBI
Mhudiblu_PPA_v039,350,135 - 9,430,760 (+)NCBI
PanPan1.139,592,517 - 9,672,288 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055110899   ⟹   XP_054966874
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,282 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110900   ⟹   XP_054966875
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,282 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110901   ⟹   XP_054966876
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,276 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110902   ⟹   XP_054966877
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,413 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,171 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110903   ⟹   XP_054966878
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,276 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110905   ⟹   XP_054966880
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,283 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110907   ⟹   XP_054966882
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,233 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110908   ⟹   XP_054966883
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,169 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110910   ⟹   XP_054966885
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,409 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,280 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110911   ⟹   XP_054966886
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,282 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110912   ⟹   XP_054966887
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,414,282 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110913   ⟹   XP_054966888
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,446,351 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,451,109 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_055110914   ⟹   XP_054966889
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,447,009 - 9,498,076 (+)NCBI
NHGRI_mPanPan139,451,765 - 9,495,101 (+)NCBI
RefSeq Acc Id: XM_063602094   ⟹   XP_063458164
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,410,544 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602095   ⟹   XP_063458165
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602096   ⟹   XP_063458166
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602097   ⟹   XP_063458167
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602098   ⟹   XP_063458168
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602099   ⟹   XP_063458169
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602100   ⟹   XP_063458170
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602101   ⟹   XP_063458171
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602102   ⟹   XP_063458172
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,413 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602103   ⟹   XP_063458173
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602104   ⟹   XP_063458174
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
RefSeq Acc Id: XM_063602105   ⟹   XP_063458175
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v229,409,417 - 9,498,076 (+)NCBI
1 to 30 of 30 rows
Protein RefSeqs XP_003814278 (Get FASTA)   NCBI Sequence Viewer  
  XP_008965089 (Get FASTA)   NCBI Sequence Viewer  
  XP_008965098 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966874 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966875 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966876 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966877 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966878 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966880 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966882 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966883 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966885 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966886 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966887 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966888 (Get FASTA)   NCBI Sequence Viewer  
  XP_054966889 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458164 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458165 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458166 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458167 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458168 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458169 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458170 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458171 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458172 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458173 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458174 (Get FASTA)   NCBI Sequence Viewer  
  XP_063458175 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000036316.1
  ENSPPAP00000036328.1
1 to 30 of 30 rows
1 to 5 of 30 rows
1 to 5 of 30 rows
RefSeq Acc Id: XP_003814278   ⟸   XM_003814230
- Peptide Label: isoform X15
- UniProtKB: A0A2R9C300 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008965089   ⟸   XM_008966841
- Peptide Label: isoform X1
- UniProtKB: A0A2R9C300 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008965098   ⟸   XM_008966850
- Peptide Label: isoform X11
- UniProtKB: A0A2R9C607 (UniProtKB/TrEMBL),   A0A2R9C300 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000036328   ⟸   ENSPPAT00000059220
Ensembl Acc Id: ENSPPAP00000036316   ⟸   ENSPPAT00000059208
SET



1 to 16 of 16 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000040908 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000059208.1 UniProtKB/TrEMBL
  ENSPPAT00000059220.1 UniProtKB/TrEMBL
Gene3D-CATH 2.170.270.10 UniProtKB/TrEMBL
InterPro SET_dom UniProtKB/TrEMBL
  SET_dom_sf UniProtKB/TrEMBL
  SETD5_SET UniProtKB/TrEMBL
NCBI Gene SETD5 ENTREZGENE
PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD5 UniProtKB/TrEMBL
  UPSET, ISOFORM A UniProtKB/TrEMBL
Pfam SET UniProtKB/TrEMBL
PROSITE SET UniProtKB/TrEMBL
SMART SET UniProtKB/TrEMBL
Superfamily-SCOP SSF82199 UniProtKB/TrEMBL
UniProt A0A2R9C300 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C607 ENTREZGENE, UniProtKB/TrEMBL
1 to 16 of 16 rows