Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

RGD ID: 14181661
Species: Sus scrofa
RGD Object: Gene
Symbol: TNF
Name: tumor necrosis factor
Acc ID: GO:0045944
Term: positive regulation of transcription by RNA polymerase II
Definition: Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
Definition Source(s): GOC:go_curators, GOC:txnOH
Note: Use of the qualifier "multiple interactions" designates that the annotated interaction is comprised of a complex set of reactions and/or regulatory events, possibly involving additional chemicals and/or gene products.
Object SymbolQualifierEvidenceWithReferenceSourceNotesOriginal Reference(s)
TNF ISOTnf (Rattus norvegicus)9068941RGDNos2

PMID:9834372 REF_RGD_ID:14688051
TNFinvolved_inIEAUniProtKB:P01375 or UniProtKB:P06804 or ensembl:ENSMUSP00000025263 or ensembl:ENSP00000398698150520179Ensembl GO_REF:0000107
TNFinvolved_inIBAMGI:104798 or PANTHER:PTN001352146 or Tnf (Rattus norvegicus) or UniProtKB:P01375150520179GO_Central GO_REF:0000033
TNFacts_upstream_of_or_withinISOMGI:1076569068941MGI PMID:18025219

PMID:18025219
TNFacts_upstream_of_or_withinISOTnf (Mus musculus)9068941MGI PMID:17670746 PMID:19404405 PMID:9305915

PMID:17670746 PMID:19404405 PMID:9305915
TNFacts_upstream_of_or_withinISOUniProtKB:Q8K1209068941MGI PMID:16803872

PMID:16803872
TNFinvolved_inIEAPANTHER:PTHR11471:SF23150520179TreeGrafter GO_REF:0000118
Go Back to source page   Continue to Ontology report