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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal femur morphology
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Accession:MP:0000559 term browser browse the term
Definition:any structural anomaly of the long bone of the thigh
Synonyms:exact_synonym: femur dysplasia


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abnormal femur morphology term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 treatment IMP compared to Jcl:Wi and untreated RGD PMID:32231239 RGD:32716373 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241 		JBrowse link
G Cyp27b1em1Thka cytochrome P450, family 27, subfamily b, polypeptide 1; CRISPR/Cas9 induced mutant 1, Thka treatment IMP compared to Jcl:Wi and untreated RGD PMID:32231239 RGD:32716373
G Lrp5 LDL receptor related protein 5 IMP RGD PMID:32833527 RGD:40902996 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp5em1Vari LDL receptor related protein 5;CRISPR/Cas9 induced mutant 1, Vari IMP RGD PMID:32833527 RGD:40902996
G Lrp5em2Vari LDL receptor related protein 5; CRISPR/Cas9 induced mutant 2, Vari IMP RGD PMID:32833527 RGD:40902996
G Lrp5em3Vari LDL receptor related protein 5; CRISPR/Cas9 induced mutant 3, Vari IMP RGD PMID:32833527 RGD:40902996
G Vdr vitamin D receptor IMP RGD PMID:32231239 RGD:32716373 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
G Vdrem1Thka vitamin D receptor; CRISPR/Cas9 induced mutant 1, Thka IMP RGD PMID:32231239 RGD:32716373
short femur term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IMP RGD PMID:29190650 RGD:151347176 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756 		JBrowse link
G Cftrem1Sage cystic fibrosis transmembrane conductance regulator; ZFN induced mutant 1 Sage IMP RGD PMID:29190650 RGD:151347176
G Nppc natriuretic peptide C IMP compared to wild type RGD PMID:29566041 RGD:127284867 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251 		JBrowse link
G Nppcem3Kyo natriuretic peptide C; ZFN induced mutant 3, Kyo IMP compared to wild type RGD PMID:29566041 RGD:127284867
G Nppcem4Kyo natriuretic peptide C; ZFN induced mutant 4, Kyo IMP compared to wild type RGD PMID:29566041 RGD:127284867
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 5402
    limbs/digits/tail phenotype 76
      abnormal limb morphology 67
        abnormal hindlimb morphology 42
          abnormal hindlimb stylopod morphology 34
            abnormal femur morphology 34
              abnormal femur compact bone thickness + 0
              abnormal femur head morphology + 1
              abnormal femur neck morphology + 2
              abnormal trochanter morphology 0
              absent femur 0
              bowed femur 0
              club-shaped femur 0
              decreased diameter of femur 0
              decreased femor compact bone volume 0
              decreased femoral compact bone area 0
              decreased femur size + 12
              decreased internal diameter of femur 0
              femur fracture 0
              increased diameter of femur 0
              increased femor compact bone volume 0
              increased femoral compact bone area 0
              increased femur size + 4
              increased internal diameter of femur 0
Path 2
Term Annotations click to browse term
  mammalian phenotype 5402
    skeleton phenotype 434
      abnormal skeleton morphology 339
        abnormal appendicular skeleton morphology 43
          abnormal limb bone morphology 38
            abnormal limb long bone morphology 38
              abnormal femur morphology 34
                abnormal femur compact bone thickness + 0
                abnormal femur head morphology + 1
                abnormal femur neck morphology + 2
                abnormal trochanter morphology 0
                absent femur 0
                bowed femur 0
                club-shaped femur 0
                decreased diameter of femur 0
                decreased femor compact bone volume 0
                decreased femoral compact bone area 0
                decreased femur size + 12
                decreased internal diameter of femur 0
                femur fracture 0
                increased diameter of femur 0
                increased femor compact bone volume 0
                increased femoral compact bone area 0
                increased femur size + 4
                increased internal diameter of femur 0
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